Rh6BG499400

protein KIAA0930 homolog

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6B
OG0004749
Physical Location & Seq
Forward (+)
69954552 .. 69958509
3958 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6BG499400.1

Sequence Viewer

Length: 1161 bp
ATGCTCCGAGATGGTGAAGAAACCCCCTCCAGATACGAGCTGCTCAGCATGGTGAAGAAGCACTCGAGCTTGTTGGGGAAGACAGTCGACGACGCCTCCGATGTCGAAATGGACCCCCGCTTCTGGCACGACGTCCTGGATTTGTACTTCGTTCGCGGCAAAGACTCCCGCGGTCGCCAGGACGATGATCTCGTCTTCTTCGTCAGAAAATTGAGCTCGCAGGGCTTCAACGACGACGTTCCGCCTTACTTTGTACGCAGGTGGGCACCTAAGTTGGATAACTTGATAGGTGAAAAAGCGGTAGAGGTGGATTGGAGGCGCTCCTTTCACTTGAACTTGATTGCTCACACTACATTTACTGTAACAGTGGCTATTTGCAGTCATCAGGACCTTCGGAATCATCAAGTTGATCAAGATAAACCATTATCTCCAATATACAAGGTAGTAAAGACTGTTTATGCATCTCCCAGCCGTGTCAACTTTCATTTGGACTCGCAAAAGGAAGTGGAGACAACGCCTGCTTATCCAGATATTTGTTTTGCTGTTGATGACTTTGACTCCACTTTTGATGCTGTGGTATTGACTGATTCAGACCATTGCTATTGTGTAATACTCAATGCACATGATGGGGCAGCATTTCCTAAGGCAAAGGATCCTGATGATTGCAGTTCTAGTGATAGTTCCTCTTTGAAGGTTGACACTAGTTCTGCAAAGGCAAAAAGTTCCAAGCTGACTCTTTTTTCGGGATTTGTCAGCTATCAAATGGTACGAGATGCATATGATGCCGGCAAGTCTCGTTTTGGGAACCTTTTATCACTTGCTCATTCCCCTGGCAAACAAGACAAACTGTACATGAAAGGTCCTGGAGGCCGCGGGGAAGTTGAAGTGGCTGTTTCTGGTGTTGTAGATCAGAGCCAGCAAGATACAGGTCCTTTTTCACCTGTTACATCCAAGATAGGATTCGGAATTGGCTTTATGGTTCGTAAAGCAGCTTCCGTTGCATCTGTGGCGGCAAAGAATGCCTATGCGGCTGCTGCTTCTAGCCATAGTTTTGACGAGGAGATGATCCCTCTCAAATGTTGCTTGATGTCCATTTCATTACCATGGGAACACATAGCATATGATCTTCTTTTTAAGGGCACTCCTCCTGTGAACTTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF2045

Protein Analysis

386

Amino Acids

42.69

Weight (kDa)

5.74

Isoelectric Point (pI)

40.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF2045 PF09741 40 - 301 6.2e-77 Uncharacterized conserved protein (DUF2045)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 249
AatII GACGTC 1 cut(s) 135
Acc36I ACCTGC 1 cut(s) 249
AccB1I GGYRCC 1 cut(s) 265
AccI GTMKAC 1 cut(s) 87
AccII CGCG 3 cut(s) 156, 171, 873
AclWI GGATC 3 cut(s) 647, 660, 1060
AcyI GRCGYC 2 cut(s) 93, 132
AfaI GTAC 4 cut(s) 146, 255, 768, 851
AfiI CCNNNNNNNGG 1 cut(s) 123
AgsI TTSAA 4 cut(s) 229, 334, 691, 884
AhlI ACTAGT 1 cut(s) 701
AjnI CCWGG 4 cut(s) 135, 177, 829, 862
AjuI GAANNNNNNNTTGG 2 cut(s) 944, 976
AluBI AGCT 6 cut(s) 40, 69, 216, 730, 756, 992
AluI AGCT 6 cut(s) 40, 69, 216, 730, 756, 992
Alw21I GWGCWC 1 cut(s) 218
Alw26I GTCTC 2 cut(s) 503, 798
AlwI GGATC 3 cut(s) 647, 660, 1060
Ama87I CYCGRG 1 cut(s) 64
AoxI GGCC 1 cut(s) 868
ApeKI GCWGC 5 cut(s) 40, 632, 989, 1031, 1034
ArsI GACNNNNNNTTYG 4 cut(s) 548, 580, 724, 756
AspLEI GCGC 1 cut(s) 321
AspS9I GGNCC 4 cut(s) 112, 388, 860, 929
AsuHPI GGTGA 4 cut(s) 26, 64, 302, 930
AvaI CYCGRG 1 cut(s) 64
AvaII GGWCC 4 cut(s) 112, 388, 860, 929
AxyI CCTNAGG 1 cut(s) 642
BaeGI GKGCMC 2 cut(s) 268, 1142
BamHI GGATCC 1 cut(s) 652
BanI GGYRCC 1 cut(s) 265
BanII GRGCYC 1 cut(s) 218
BarI GAAGNNNNNNTAC 2 cut(s) 976, 1008
BbsI GAAGAC 2 cut(s) 86, 187
Bbv12I GWGCWC 1 cut(s) 218
BbvI GCAGC 5 cut(s) 27, 644, 1001, 1018, 1021
BccI CCATC 2 cut(s) 5, 620
BceAI ACGGC 1 cut(s) 456
BciT130I CCWGG 4 cut(s) 137, 179, 831, 864
BclI TGATCA 1 cut(s) 409
BcoDI GTCTC 2 cut(s) 503, 798
BcuI ACTAGT 1 cut(s) 701
BfaI CTAG 3 cut(s) 672, 702, 1041
BfoI RGCGCY 1 cut(s) 322
BfuAI ACCTGC 1 cut(s) 249
BglI GCCNNNNNGGC 1 cut(s) 1028
BisI GCNGC 9 cut(s) 41, 157, 633, 871, 990, 1011, 1029, 1032, 1035
BlpI GCTNAGC 1 cut(s) 44
BlsI GCNGC 9 cut(s) 42, 158, 634, 872, 991, 1012, 1030, 1033, 1036
Bme1390I CCNGG 4 cut(s) 137, 179, 831, 864
Bme18I GGWCC 4 cut(s) 112, 388, 860, 929
BmeT110I CYCGRG 1 cut(s) 64
BmgT120I GGNCC 4 cut(s) 112, 388, 860, 929
BmiI GGNNCC 4 cut(s) 114, 267, 654, 806
BmrFI CCNGG 4 cut(s) 137, 179, 831, 864
BmsI GCATC 5 cut(s) 470, 559, 763, 772, 1010
BpiI GAAGAC 2 cut(s) 86, 187
BpmI CTGGAG 2 cut(s) 13, 885
Bpu1102I GCTNAGC 1 cut(s) 44
BsaHI GRCGYC 2 cut(s) 93, 132
BsaJI CCNNGG 4 cut(s) 169, 829, 871, 1103
BsaXI ACNNNNNCTCC 4 cut(s) 80, 110, 542, 572
Bsc4I CCNNNNNNNGG 1 cut(s) 123
Bse118I RCCGGY 1 cut(s) 785
Bse21I CCTNAGG 1 cut(s) 642
Bse3DI GCAATG 1 cut(s) 595
BseBI CCWGG 4 cut(s) 137, 179, 831, 864
BseDI CCNNGG 4 cut(s) 169, 829, 871, 1103
BseGI GGATG 1 cut(s) 947
BseLI CCNNNNNNNGG 1 cut(s) 123
BseMI GCAATG 1 cut(s) 595
BseMII CTCAG 1 cut(s) 58
BseRI GAGGAG 2 cut(s) 1073, 1134
BseSI GKGCMC 2 cut(s) 268, 1142
BseXI GCAGC 5 cut(s) 27, 644, 1001, 1018, 1021
BseYI CCCAGC 1 cut(s) 467
Bsh1236I CGCG 3 cut(s) 156, 171, 873
Bsh1285I CGRYCG 1 cut(s) 175
BshFI GGCC 1 cut(s) 870
BshNI GGYRCC 1 cut(s) 265
BsiEI CGRYCG 1 cut(s) 175
BsiHKAI GWGCWC 1 cut(s) 218
BsiHKCI CYCGRG 1 cut(s) 64
BsiSI CCGG 1 cut(s) 786
BslI CCNNNNNNNGG 1 cut(s) 123
BsmAI GTCTC 2 cut(s) 503, 798
BsmI GAATGC 1 cut(s) 1024
BsnI GGCC 1 cut(s) 870
BsoBI CYCGRG 1 cut(s) 64
Bsp1286I GDGCHC 3 cut(s) 218, 268, 1142
Bsp1407I TGTACA 1 cut(s) 849
Bsp143I GATC 6 cut(s) 187, 409, 652, 907, 1065, 1123
Bsp1720I GCTNAGC 1 cut(s) 44
Bsp19I CCATGG 1 cut(s) 1103
BspANI GGCC 1 cut(s) 870
BspCNI CTCAG 1 cut(s) 57
BspFNI CGCG 3 cut(s) 156, 171, 873
BspLI GGNNCC 4 cut(s) 114, 267, 654, 806
BspMI ACCTGC 1 cut(s) 249
BspPI GGATC 3 cut(s) 647, 660, 1060
BspT107I GGYRCC 1 cut(s) 265
BsrDI GCAATG 1 cut(s) 595
BsrFI RCCGGY 1 cut(s) 785
BsrGI TGTACA 1 cut(s) 849
BssAI RCCGGY 1 cut(s) 785
BssECI CCNNGG 4 cut(s) 169, 829, 871, 1103
BssMI GATC 6 cut(s) 187, 409, 652, 907, 1065, 1123
BssNI GRCGYC 2 cut(s) 93, 132
BssT1I CCWWGG 1 cut(s) 1103
Bst2UI CCWGG 4 cut(s) 137, 179, 831, 864
Bst4CI ACNGT 5 cut(s) 85, 361, 367, 454, 849
BstACI GRCGYC 2 cut(s) 93, 132
BstAPI GCANNNNNTGC 2 cut(s) 782, 1019
BstAUI TGTACA 1 cut(s) 849
BstC8I GCNNGC 4 cut(s) 218, 519, 787, 917
BstDEI CTNAG 3 cut(s) 44, 270, 642
BstDSI CCRYGG 3 cut(s) 169, 871, 1103
BstF5I GGATG 1 cut(s) 947
BstFNI CGCG 3 cut(s) 156, 171, 873
BstH2I RGCGCY 1 cut(s) 322
BstHHI GCGC 1 cut(s) 321
BstKTI GATC 6 cut(s) 190, 412, 655, 910, 1068, 1126
BstMAI GTCTC 2 cut(s) 503, 798
BstMBI GATC 6 cut(s) 187, 409, 652, 907, 1065, 1123
BstMCI CGRYCG 1 cut(s) 175
BstMWI GCNNNNNNNGC 7 cut(s) 222, 782, 998, 1007, 1019, 1028, 1034
BstNI CCWGG 4 cut(s) 137, 179, 831, 864
BstSCI CCNGG 4 cut(s) 135, 177, 829, 862
BstSLI GKGCMC 2 cut(s) 268, 1142
BstUI CGCG 3 cut(s) 156, 171, 873
BstV1I GCAGC 5 cut(s) 27, 644, 1001, 1018, 1021
BstV2I GAAGAC 2 cut(s) 86, 187
BstX2I RGATCY 1 cut(s) 652
BstYI RGATCY 1 cut(s) 652
Bsu36I CCTNAGG 1 cut(s) 642
BsuRI GGCC 1 cut(s) 870
BtgI CCRYGG 3 cut(s) 169, 871, 1103
BtsCI GGATG 1 cut(s) 947
BtsIMutI CAGTG 1 cut(s) 372
BveI ACCTGC 1 cut(s) 249
Cac8I GCNNGC 4 cut(s) 218, 519, 787, 917
CfoI GCGC 1 cut(s) 321
Cfr10I RCCGGY 1 cut(s) 785
Cfr13I GGNCC 4 cut(s) 112, 388, 860, 929
Cfr42I CCGCGG 2 cut(s) 172, 874
CseI GACGC 1 cut(s) 101
Csp6I GTAC 4 cut(s) 145, 254, 767, 850
CviAII CATG 4 cut(s) 49, 623, 853, 1104
CviQI GTAC 4 cut(s) 145, 254, 767, 850
DdeI CTNAG 3 cut(s) 44, 270, 642
DpnI GATC 6 cut(s) 189, 411, 654, 909, 1067, 1125
DpnII GATC 6 cut(s) 187, 409, 652, 907, 1065, 1123
EciI GGCGGA 1 cut(s) 231
Ecl136II GAGCTC 1 cut(s) 216
Eco130I CCWWGG 1 cut(s) 1103
Eco24I GRGCYC 1 cut(s) 218
Eco47I GGWCC 4 cut(s) 112, 388, 860, 929
Eco53kI GAGCTC 1 cut(s) 216
Eco81I CCTNAGG 1 cut(s) 642
Eco88I CYCGRG 1 cut(s) 64
EcoICRI GAGCTC 1 cut(s) 216
EcoO109I RGGNCCY 3 cut(s) 388, 860, 929
EcoRII CCWGG 4 cut(s) 135, 177, 829, 862
EcoT14I CCWWGG 1 cut(s) 1103
EcoT22I ATGCAT 2 cut(s) 463, 778
EcoT38I GRGCYC 1 cut(s) 218
ErhI CCWWGG 1 cut(s) 1103
FaeI CATG 4 cut(s) 52, 626, 856, 1107
FatI CATG 4 cut(s) 48, 622, 852, 1103
FauI CCCGC 3 cut(s) 125, 176, 866
FauNDI CATATG 2 cut(s) 778, 1120
FbaI TGATCA 1 cut(s) 409
FblI GTMKAC 1 cut(s) 87
Fnu4HI GCNGC 9 cut(s) 41, 157, 633, 871, 990, 1011, 1029, 1032, 1035
FokI GGATG 1 cut(s) 934
FriOI GRGCYC 1 cut(s) 218
Fsp4HI GCNGC 9 cut(s) 41, 157, 633, 871, 990, 1011, 1029, 1032, 1035
FspBI CTAG 3 cut(s) 672, 702, 1041
GlaI GCGC 1 cut(s) 320
GluI GCNGC 9 cut(s) 41, 157, 633, 871, 990, 1011, 1029, 1032, 1035
GsaI CCCAGC 1 cut(s) 471
GsuI CTGGAG 2 cut(s) 13, 885
HaeII RGCGCY 1 cut(s) 322
HaeIII GGCC 1 cut(s) 870
HapII CCGG 1 cut(s) 786
HgaI GACGC 1 cut(s) 101
HhaI GCGC 1 cut(s) 321
Hin1I GRCGYC 2 cut(s) 93, 132
Hin1II CATG 4 cut(s) 52, 626, 856, 1107
Hin6I GCGC 1 cut(s) 319
HinP1I GCGC 1 cut(s) 319
HincII GTYRAC 3 cut(s) 88, 478, 697
HindII GTYRAC 3 cut(s) 88, 478, 697
HinfI GANTC 7 cut(s) 164, 397, 491, 557, 587, 733, 960
HpaII CCGG 1 cut(s) 786
HphI GGTGA 4 cut(s) 26, 64, 302, 930
Hpy166II GTNNAC 4 cut(s) 88, 478, 697, 1153
Hpy188I TCNGA 7 cut(s) 8, 100, 206, 396, 592, 912, 965
Hpy188III TCNNGA 6 cut(s) 30, 386, 413, 527, 656, 744
Hpy8I GTNNAC 4 cut(s) 88, 478, 697, 1153
Hpy99I CGWCG 5 cut(s) 92, 95, 134, 236, 239
HpyAV CCTTC 2 cut(s) 401, 685
HpyCH4III ACNGT 5 cut(s) 85, 361, 367, 454, 849
HpyCH4IV ACGT 2 cut(s) 132, 237
HpyCH4V TGCA 7 cut(s) 378, 461, 620, 666, 710, 776, 1001
HpyF10VI GCNNNNNNNGC 7 cut(s) 222, 782, 998, 1007, 1019, 1028, 1034
HpyF3I CTNAG 3 cut(s) 44, 270, 642
HpySE526I ACGT 2 cut(s) 132, 237
Hsp92I GRCGYC 2 cut(s) 93, 132
Hsp92II CATG 4 cut(s) 52, 626, 856, 1107
HspAI GCGC 1 cut(s) 319
KroI GCCGGC 1 cut(s) 785
KroNI GCCGGC 1 cut(s) 787
Ksp22I TGATCA 1 cut(s) 409
KspI CCGCGG 2 cut(s) 172, 874
Kzo9I GATC 6 cut(s) 187, 409, 652, 907, 1065, 1123
LmnI GCTCC 2 cut(s) 9, 326
Lsp1109I GCAGC 5 cut(s) 27, 644, 1001, 1018, 1021
LweI GCATC 5 cut(s) 470, 559, 763, 772, 1010
MaeI CTAG 3 cut(s) 672, 702, 1041
MaeII ACGT 2 cut(s) 132, 237
MaeIII GTNAC 2 cut(s) 361, 943
MalI GATC 6 cut(s) 189, 411, 654, 909, 1067, 1125
MboI GATC 6 cut(s) 187, 409, 652, 907, 1065, 1123
MboII GAAGA 6 cut(s) 29, 67, 91, 187, 190, 1118
MflI RGATCY 1 cut(s) 652
MhlI GDGCHC 3 cut(s) 218, 268, 1142
MluCI AATT 2 cut(s) 209, 966
MlyI GAGTC 4 cut(s) 158, 485, 551, 727
MmeI TCCRAC 1 cut(s) 255
MnlI CCTC 9 cut(s) 37, 106, 298, 309, 694, 860, 1051, 1080, 1155
Mph1103I ATGCAT 2 cut(s) 463, 778
MroNI GCCGGC 1 cut(s) 785
MseI TTAA 1 cut(s) 1134
MslI CAYNNNNRTG 1 cut(s) 1102
MspA1I CMGCKG 2 cut(s) 171, 873
MspI CCGG 1 cut(s) 786
MspR9I CCNGG 4 cut(s) 137, 179, 831, 864
Mva1269I GAATGC 1 cut(s) 1024
MvaI CCWGG 4 cut(s) 137, 179, 831, 864
MvnI CGCG 3 cut(s) 156, 171, 873
MwoI GCNNNNNNNGC 7 cut(s) 222, 782, 998, 1007, 1019, 1028, 1034
NaeI GCCGGC 1 cut(s) 787
NcoI CCATGG 1 cut(s) 1103
NdeI CATATG 2 cut(s) 778, 1120
NdeII GATC 6 cut(s) 187, 409, 652, 907, 1065, 1123
NgoMIV GCCGGC 1 cut(s) 785
NlaIII CATG 4 cut(s) 52, 626, 856, 1107
NlaIV GGNNCC 4 cut(s) 114, 267, 654, 806
NsiI ATGCAT 2 cut(s) 463, 778
PaeR7I CTCGAG 1 cut(s) 64
PaqCI CACCTGC 1 cut(s) 249
PcsI WCGNNNNNNNCGW 3 cut(s) 96, 189, 198
PctI GAATGC 1 cut(s) 1024
PdiI GCCGGC 1 cut(s) 787
PfeI GAWTC 3 cut(s) 397, 587, 960
PfoI TCCNGGA 2 cut(s) 135, 862
PkrI GCNGC 9 cut(s) 42, 158, 634, 872, 991, 1012, 1030, 1033, 1036
PleI GAGTC 4 cut(s) 158, 485, 551, 727
PpsI GAGTC 4 cut(s) 158, 485, 551, 727
PpuMI RGGWCCY 3 cut(s) 388, 860, 929
Psp124BI GAGCTC 1 cut(s) 218
Psp5II RGGWCCY 3 cut(s) 388, 860, 929
Psp6I CCWGG 4 cut(s) 135, 177, 829, 862
PspFI CCCAGC 1 cut(s) 467
PspGI CCWGG 4 cut(s) 135, 177, 829, 862
PspN4I GGNNCC 4 cut(s) 114, 267, 654, 806
PspPI GGNCC 4 cut(s) 112, 388, 860, 929
PspPPI RGGWCCY 3 cut(s) 388, 860, 929
PspXI VCTCGAGB 1 cut(s) 64
PsuI RGATCY 1 cut(s) 652
RsaI GTAC 4 cut(s) 146, 255, 768, 851
RsaNI GTAC 4 cut(s) 145, 254, 767, 850
RseI CAYNNNNRTG 1 cut(s) 1102
SacI GAGCTC 1 cut(s) 218
SacII CCGCGG 2 cut(s) 172, 874
SalI GTCGAC 1 cut(s) 86
SaqAI TTAA 1 cut(s) 1134
SatI GCNGC 9 cut(s) 41, 157, 633, 871, 990, 1011, 1029, 1032, 1035
Sau3AI GATC 6 cut(s) 187, 409, 652, 907, 1065, 1123
Sau96I GGNCC 4 cut(s) 112, 388, 860, 929
SchI GAGTC 4 cut(s) 158, 485, 551, 727
ScrFI CCNGG 4 cut(s) 137, 179, 831, 864
SduI GDGCHC 3 cut(s) 218, 268, 1142
SfaNI GCATC 5 cut(s) 470, 559, 763, 772, 1010
Sfr274I CTCGAG 1 cut(s) 64
Sfr303I CCGCGG 2 cut(s) 172, 874
SgrBI CCGCGG 2 cut(s) 172, 874
SinI GGWCC 4 cut(s) 112, 388, 860, 929
SlaI CTCGAG 1 cut(s) 64
SmiMI CAYNNNNRTG 1 cut(s) 1102
SmlI CTYRAG 1 cut(s) 64
SmoI CTYRAG 1 cut(s) 64
SpeI ACTAGT 1 cut(s) 701
Sse9I AATT 2 cut(s) 209, 966
SspMI CTAG 3 cut(s) 672, 702, 1041
SstI GAGCTC 1 cut(s) 218
StyD4I CCNGG 4 cut(s) 135, 177, 829, 862
StyI CCWWGG 1 cut(s) 1103
TaaI ACNGT 5 cut(s) 85, 361, 367, 454, 849
TaiI ACGT 2 cut(s) 135, 240
TaqI TCGA 3 cut(s) 65, 87, 105
TasI AATT 2 cut(s) 209, 966
TatI WGTACW 2 cut(s) 144, 849
TauI GCSGC 4 cut(s) 159, 873, 1013, 1031
TfiI GAWTC 3 cut(s) 397, 587, 960
Tru1I TTAA 1 cut(s) 1134
Tru9I TTAA 1 cut(s) 1134
TscAI CASTG 1 cut(s) 372
TseI GCWGC 5 cut(s) 40, 632, 989, 1031, 1034
TspDTI ATGAA 3 cut(s) 473, 869, 1086
TspGWI ACGGA 1 cut(s) 985
TspRI CASTG 1 cut(s) 372
VpaK11BI GGWCC 4 cut(s) 112, 388, 860, 929
XhoI CTCGAG 1 cut(s) 64
XmiI GTMKAC 1 cut(s) 87
XspI CTAG 3 cut(s) 672, 702, 1041
ZraI GACGTC 1 cut(s) 133
Zsp2I ATGCAT 2 cut(s) 463, 778
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.