Rorug06G0397700

RING finger and CHY zinc finger domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0005253
Physical Location & Seq
Reverse (-)
54347809 .. 54350208
2400 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0397700.1

Sequence Viewer

Length: 1539 bp
ATGCTTTCATATTTCTCCTCAGTAATCTACCCATCTCGCGCCTTCTCCACCTCCACCTCCACCTCCACCGTCGCCGTCAGTCCGTCACCCACTCCCGCCATCCTGACATGTAAAACGATGCGGAGAAGAATCATCCGCTTCTGCCACGTGTCACTCTGTACTCGCCAATACTCTAGCTCATCGGAAATCGCCGGACCGCCGCCGCTCATCCGAGTATCGAACCACGTGGCCAAATTGGGCCCACCGAAAGAAGGCCCGAAGCCCAGGCAGCTACTCTCCTTGCCGCCTTTTCCCGGTCGACATTTGCCGGGGAAGAAGAAGTCATACCAAGACGGCGTCGTTTCACGACCCTCACACGTCACCGCAGTCAGTTGGCTCAAGTATTACTTCCATGAGATTGACGACACTGCCATTCGGTCCCATTTCAACAAAGGTCTTGTTCAGATGGAATGCCCAAGTTCAATTCGGAAGGAAGGGCAAGTGAAACATATGAGAAAGATTAGGCCTAGTCATGTAATGGATGAAGGTGCAAGAGTATATGTGCCCGTGTCGATTGCGGATAGTAAAGTTTCAAGGAGATTTGACTGCATACCGAGTGAGACATTGTACCCAAATGCGGATGAGATTGACTACTTGCAAAGGCTTGTCAAGTACAAGGACTCTGCTATAATAGTGCTGAACAAGCCCCCAAAATTGCCGGTTAAGGGTAATGTGCCAGTCCATAACAGCATGGATGCATTGGCAGCAGCAGCGTTATCTTATGATTATGATGAAGGTCCTAAATTGGTTCATCGGCTTGATAGAGAGAGCAGTGGCCTCCTTTTAATGGGAAGAACAAAAGAAAGTGTATCTGTTCTGCAGTCGTCATACACTGACATCAACATTGGGAAATCATCATGCAGGGCTTGGAATGATGCATGTAGAGCAAAATGTCAGAGGTACTGGGCATTGGTTATAGGGTCACCCAAGGAAAAGGAAGGCTTAATTTGTGCTCCTCTTACGAAGCTGCATCTTGACGATGGGAAGACGGAGAGGGTCATCTTGGCTCATCAATCAGGATTAGAAGCTTCCCAACCGACTCTAACTCAATATCGGGTGCTTGGTCCTACGATAAATGGATGCTCATGGATTGAATTACAACCACTCACTAGCCGAAAGCATCAGCTCCGTGTTCATTGTGCTGAAGCTCTAGGCACACCAATTGTGGGTGACTATAAGTATGGGTGGTATGTTCACCGGAGATGGAAACAAATGCCTCAAGTCGATATCGAGCCAGCAACTGGGCTACAGTACAAGTTGCGGAGGCCAGCGGGTATGGATGTACAGAAGGGAAGTGTTCTATCAAAAGTCCCTCTTTTACATCTACATTGTAGAGAGCTCGTACTCCCCAATATTGCTAAGTTCCTTGTCTTATTGGATCAGAAGTTAGACAACCGGCACCCTGTAGATCGTTCGAAGCCAGATGTCCTTCGGTTTGTGGCATCAATGCCAACGCACATGAAACTTAGTTGGAATCTCATGTCATCTTTTTTGGTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000151 GO:0002039 GO:0003674 GO:0003824 GO:0004842 GO:0005102 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005829 GO:0006464 GO:0006508 GO:0006511 GO:0006807 GO:0008150 GO:0008152 GO:0008270 GO:0009056 GO:0009057 GO:0009893 GO:0009894 GO:0009896 GO:0009987 GO:0010604 GO:0016567 GO:0016740 GO:0019222 GO:0019538 GO:0019787 GO:0019941 GO:0030162 GO:0030163 GO:0031323 GO:0031325 GO:0031329 GO:0031331 GO:0031396 GO:0031398 GO:0031399 GO:0031401 GO:0031974 GO:0031981 GO:0032268 GO:0032270 GO:0032434 GO:0032436 GO:0032446 GO:0032991 GO:0036211 GO:0042176 GO:0042802 GO:0042803 GO:0043167 GO:0043169 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0045732 GO:0045862 GO:0046872 GO:0046914 GO:0046983 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0051603 GO:0051865 GO:0060255 GO:0061136 GO:0065007 GO:0070013 GO:0070647 GO:0071704 GO:0080090 GO:0140096 GO:1901564 GO:1901565 GO:1901575 GO:1901800 GO:1902494 GO:1903050 GO:1903052 GO:1903320 GO:1903322 GO:1903362 GO:1903364 GO:1990234 GO:2000058 GO:2000060
KEGG Pathways
Metabolic & Signaling
ko04115 ko04120 ko05162 map04115 map04120 map05162
Pfam Domains
Protein Families
zf-CHY zf-RING_2 zinc_ribbon_6

Protein Analysis

512

Amino Acids

57.51

Weight (kDa)

9.68

Isoelectric Point (pI)

55.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PseudoU_synth_2 PF00849 223 - 394 5.4e-22 RNA pseudouridylate synthase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1437
AccB7I CCANNNNNTGG 1 cut(s) 1280
AccBSI CCGCTC 1 cut(s) 205
AccI GTMKAC 1 cut(s) 298
AccII CGCG 1 cut(s) 39
AclWI GGATC 1 cut(s) 1425
AcoI YGGCCR 1 cut(s) 228
AcuI CTGAAG 1 cut(s) 1203
AcvI CACGTG 2 cut(s) 148, 226
AcyI GRCGYC 1 cut(s) 336
AfaI GTAC 7 cut(s) 160, 608, 653, 941, 1292, 1323, 1383
AfiI CCNNNNNNNGG 7 cut(s) 251, 293, 616, 704, 826, 1205, 1280
AflIII ACRYGT 3 cut(s) 107, 147, 355
AgsI TTSAA 4 cut(s) 427, 462, 573, 1133
AjiI CACGTC 1 cut(s) 358
AjnI CCWGG 1 cut(s) 263
AluBI AGCT 7 cut(s) 177, 271, 1006, 1067, 1165, 1187, 1378
AluI AGCT 7 cut(s) 177, 271, 1006, 1067, 1165, 1187, 1378
Alw21I GWGCWC 2 cut(s) 994, 1380
Alw26I GTCTC 1 cut(s) 593
AlwI GGATC 1 cut(s) 1425
AlwNI CAGNNNCTG 1 cut(s) 1280
AoxI GGCC 6 cut(s) 228, 238, 253, 503, 814, 1304
ApaI GGGCCC 1 cut(s) 242
ApeKI GCWGC 5 cut(s) 268, 743, 746, 749, 1006
AspLEI GCGC 1 cut(s) 41
AspS9I GGNCC 7 cut(s) 194, 238, 239, 254, 417, 776, 1103
AsuC2I CCSGG 2 cut(s) 294, 309
AsuHPI GGTGA 5 cut(s) 78, 352, 954, 1220, 1226
AsuII TTCGAA 1 cut(s) 1454
AvaII GGWCC 4 cut(s) 194, 417, 776, 1103
BaeGI GKGCMC 2 cut(s) 242, 546
BalI TGGCCA 1 cut(s) 230
BanI GGYRCC 1 cut(s) 1437
BanII GRGCYC 2 cut(s) 242, 1380
BarI GAAGNNNNNNTAC 2 cut(s) 308, 340
BbrPI CACGTG 2 cut(s) 148, 226
BbsI GAAGAC 1 cut(s) 1031
Bbv12I GWGCWC 2 cut(s) 994, 1380
BbvI GCAGC 5 cut(s) 280, 755, 758, 761, 993
BccI CCATC 5 cut(s) 40, 107, 439, 1013, 1236
BceAI ACGGC 2 cut(s) 59, 349
BciT130I CCWGG 1 cut(s) 265
BcnI CCSGG 2 cut(s) 294, 309
BcoDI GTCTC 1 cut(s) 593
BfaI CTAG 4 cut(s) 174, 507, 1149, 1190
BfmI CTRYAG 3 cut(s) 857, 1286, 1443
BisI GCNGC 8 cut(s) 200, 203, 269, 284, 744, 747, 750, 1007
BlsI GCNGC 8 cut(s) 201, 204, 270, 285, 745, 748, 751, 1008
Bme1390I CCNGG 3 cut(s) 265, 294, 309
Bme18I GGWCC 4 cut(s) 194, 417, 776, 1103
BmgBI CACGTC 1 cut(s) 358
BmgT120I GGNCC 7 cut(s) 194, 238, 239, 254, 417, 776, 1103
BmiI GGNNCC 3 cut(s) 240, 419, 1439
BmrFI CCNGG 3 cut(s) 265, 294, 309
BmrI ACTGGG 2 cut(s) 952, 1290
BmsI GCATC 7 cut(s) 108, 724, 904, 1018, 1109, 1168, 1490
BmuI ACTGGG 2 cut(s) 952, 1290
BpiI GAAGAC 1 cut(s) 1031
Bpu14I TTCGAA 1 cut(s) 1454
BpuEI CTTGAG 2 cut(s) 362, 1242
BpuMI CCSGG 2 cut(s) 294, 309
BsaAI YACGTR 2 cut(s) 148, 226
BsaHI GRCGYC 1 cut(s) 336
BsaJI CCNNGG 3 cut(s) 263, 308, 966
BsaWI WCCGGW 1 cut(s) 1236
Bsc4I CCNNNNNNNGG 7 cut(s) 251, 293, 616, 704, 826, 1205, 1280
Bse118I RCCGGY 2 cut(s) 697, 1434
Bse1I ACTGG 3 cut(s) 716, 947, 1285
BseBI CCWGG 1 cut(s) 265
BseDI CCNNGG 3 cut(s) 263, 308, 966
BseGI GGATG 8 cut(s) 99, 132, 207, 526, 625, 739, 1124, 1324
BseLI CCNNNNNNNGG 7 cut(s) 251, 293, 616, 704, 826, 1205, 1280
BseMII CTCAG 1 cut(s) 33
BseNI ACTGG 3 cut(s) 716, 947, 1285
BseRI GAGGAG 2 cut(s) 7, 984
BseSI GKGCMC 2 cut(s) 242, 546
BseXI GCAGC 5 cut(s) 280, 755, 758, 761, 993
Bsh1236I CGCG 1 cut(s) 39
Bsh1285I CGRYCG 1 cut(s) 298
BshFI GGCC 6 cut(s) 230, 240, 255, 505, 816, 1306
BshNI GGYRCC 1 cut(s) 1437
BsiEI CGRYCG 1 cut(s) 298
BsiHKAI GWGCWC 2 cut(s) 994, 1380
BsiSI CCGG 6 cut(s) 192, 294, 308, 698, 1237, 1435
BslFI GGGAC 2 cut(s) 403, 1334
BslI CCNNNNNNNGG 7 cut(s) 251, 293, 616, 704, 826, 1205, 1280
BsmAI GTCTC 1 cut(s) 593
BsmFI GGGAC 2 cut(s) 403, 1334
BsmI GAATGC 1 cut(s) 455
BsnI GGCC 6 cut(s) 230, 240, 255, 505, 816, 1306
Bsp119I TTCGAA 1 cut(s) 1454
Bsp120I GGGCCC 1 cut(s) 238
Bsp1286I GDGCHC 4 cut(s) 242, 546, 994, 1380
Bsp1407I TGTACA 1 cut(s) 1321
Bsp143I GATC 2 cut(s) 1417, 1447
BspANI GGCC 6 cut(s) 230, 240, 255, 505, 816, 1306
BspCNI CTCAG 1 cut(s) 32
BspFNI CGCG 1 cut(s) 39
BspLI GGNNCC 3 cut(s) 240, 419, 1439
BspMAI CTGCAG 1 cut(s) 861
BspPI GGATC 1 cut(s) 1425
BspT104I TTCGAA 1 cut(s) 1454
BspT107I GGYRCC 1 cut(s) 1437
BsrBI CCGCTC 1 cut(s) 205
BsrFI RCCGGY 2 cut(s) 697, 1434
BsrGI TGTACA 1 cut(s) 1321
BsrI ACTGG 3 cut(s) 716, 947, 1285
BssAI RCCGGY 2 cut(s) 697, 1434
BssECI CCNNGG 3 cut(s) 263, 308, 966
BssMI GATC 2 cut(s) 1417, 1447
BssNI GRCGYC 1 cut(s) 336
BssT1I CCWWGG 1 cut(s) 966
Bst2UI CCWGG 1 cut(s) 265
Bst4CI ACNGT 2 cut(s) 70, 1290
BstACI GRCGYC 1 cut(s) 336
BstAUI TGTACA 1 cut(s) 1321
BstBAI YACGTR 2 cut(s) 148, 226
BstBI TTCGAA 1 cut(s) 1454
BstC8I GCNNGC 2 cut(s) 1275, 1308
BstDEI CTNAG 3 cut(s) 19, 1398, 1505
BstEII GGTNACC 1 cut(s) 960
BstF5I GGATG 8 cut(s) 99, 132, 207, 526, 625, 739, 1124, 1324
BstFNI CGCG 1 cut(s) 39
BstHHI GCGC 1 cut(s) 41
BstKTI GATC 2 cut(s) 1420, 1450
BstMAI GTCTC 1 cut(s) 593
BstMBI GATC 2 cut(s) 1417, 1447
BstMCI CGRYCG 1 cut(s) 298
BstMWI GCNNNNNNNGC 5 cut(s) 268, 682, 743, 749, 923
BstNI CCWGG 1 cut(s) 265
BstNSI RCATGY 2 cut(s) 111, 921
BstPI GGTNACC 1 cut(s) 960
BstSCI CCNGG 3 cut(s) 263, 292, 307
BstSFI CTRYAG 3 cut(s) 857, 1286, 1443
BstSLI GKGCMC 2 cut(s) 242, 546
BstUI CGCG 1 cut(s) 39
BstV1I GCAGC 5 cut(s) 280, 755, 758, 761, 993
BstV2I GAAGAC 1 cut(s) 1031
BsuRI GGCC 6 cut(s) 230, 240, 255, 505, 816, 1306
BtrI CACGTC 1 cut(s) 358
BtsCI GGATG 8 cut(s) 99, 132, 207, 526, 625, 739, 1124, 1324
BtsI GCAGTG 2 cut(s) 405, 817
BtsIMutI CAGTG 3 cut(s) 405, 817, 870
Cac8I GCNNGC 2 cut(s) 1275, 1308
CaiI CAGNNNCTG 1 cut(s) 1280
CfoI GCGC 1 cut(s) 41
Cfr10I RCCGGY 2 cut(s) 697, 1434
Cfr13I GGNCC 7 cut(s) 194, 238, 239, 254, 417, 776, 1103
CpoI CGGWCCG 1 cut(s) 194
CseI GACGC 1 cut(s) 325
Csp6I GTAC 7 cut(s) 159, 607, 652, 940, 1291, 1322, 1382
CspI CGGWCCG 1 cut(s) 194
CviAII CATG 9 cut(s) 108, 392, 512, 730, 897, 918, 1125, 1498, 1519
CviQI GTAC 7 cut(s) 159, 607, 652, 940, 1291, 1322, 1382
DdeI CTNAG 3 cut(s) 19, 1398, 1505
DpnI GATC 2 cut(s) 1419, 1449
DpnII GATC 2 cut(s) 1417, 1447
EaeI YGGCCR 1 cut(s) 228
Ecl136II GAGCTC 1 cut(s) 1378
Eco130I CCWWGG 1 cut(s) 966
Eco147I AGGCCT 1 cut(s) 505
Eco24I GRGCYC 2 cut(s) 242, 1380
Eco32I GATATC 1 cut(s) 1267
Eco47I GGWCC 4 cut(s) 194, 417, 776, 1103
Eco53kI GAGCTC 1 cut(s) 1378
Eco57I CTGAAG 1 cut(s) 1203
Eco72I CACGTG 2 cut(s) 148, 226
Eco91I GGTNACC 1 cut(s) 960
EcoICRI GAGCTC 1 cut(s) 1378
EcoO109I RGGNCCY 1 cut(s) 776
EcoO65I GGTNACC 1 cut(s) 960
EcoRII CCWGG 1 cut(s) 263
EcoRV GATATC 1 cut(s) 1267
EcoT14I CCWWGG 1 cut(s) 966
EcoT22I ATGCAT 2 cut(s) 739, 919
EcoT38I GRGCYC 2 cut(s) 242, 1380
ErhI CCWWGG 1 cut(s) 966
FaeI CATG 9 cut(s) 111, 395, 515, 733, 900, 921, 1128, 1501, 1522
FalI AAGNNNNNCTT 6 cut(s) 371, 403, 965, 997, 1338, 1370
FaqI GGGAC 2 cut(s) 403, 1334
FatI CATG 9 cut(s) 107, 391, 511, 729, 896, 917, 1124, 1497, 1518
FauI CCCGC 2 cut(s) 103, 1303
FauNDI CATATG 1 cut(s) 489
FblI GTMKAC 1 cut(s) 298
Fnu4HI GCNGC 8 cut(s) 200, 203, 269, 284, 744, 747, 750, 1007
FokI GGATG 8 cut(s) 86, 119, 194, 533, 632, 746, 1131, 1331
FriOI GRGCYC 2 cut(s) 242, 1380
Fsp4HI GCNGC 8 cut(s) 200, 203, 269, 284, 744, 747, 750, 1007
FspBI CTAG 4 cut(s) 174, 507, 1149, 1190
GlaI GCGC 1 cut(s) 40
GluI GCNGC 8 cut(s) 200, 203, 269, 284, 744, 747, 750, 1007
HaeIII GGCC 6 cut(s) 230, 240, 255, 505, 816, 1306
HapII CCGG 6 cut(s) 192, 294, 308, 698, 1237, 1435
HgaI GACGC 1 cut(s) 325
HhaI GCGC 1 cut(s) 41
Hin1I GRCGYC 1 cut(s) 336
Hin1II CATG 9 cut(s) 111, 395, 515, 733, 900, 921, 1128, 1501, 1522
Hin6I GCGC 1 cut(s) 39
HinP1I GCGC 1 cut(s) 39
HincII GTYRAC 1 cut(s) 299
HindII GTYRAC 1 cut(s) 299
HindIII AAGCTT 1 cut(s) 1065
HinfI GANTC 4 cut(s) 129, 659, 1078, 1513
HpaII CCGG 6 cut(s) 192, 294, 308, 698, 1237, 1435
HphI GGTGA 5 cut(s) 78, 352, 954, 1220, 1226
Hpy166II GTNNAC 2 cut(s) 299, 1234
Hpy188I TCNGA 6 cut(s) 184, 212, 444, 468, 936, 1422
Hpy188III TCNNGA 4 cut(s) 103, 345, 1013, 1056
Hpy8I GTNNAC 2 cut(s) 299, 1234
Hpy99I CGWCG 2 cut(s) 74, 341
HpyAV CCTTC 9 cut(s) 52, 245, 463, 467, 518, 767, 971, 1321, 1478
HpyCH4III ACNGT 2 cut(s) 70, 1290
HpyCH4IV ACGT 3 cut(s) 147, 225, 357
HpyCH4V TGCA 8 cut(s) 530, 588, 637, 737, 859, 900, 917, 1009
HpyF10VI GCNNNNNNNGC 5 cut(s) 268, 682, 743, 749, 923
HpyF3I CTNAG 3 cut(s) 19, 1398, 1505
HpySE526I ACGT 3 cut(s) 147, 225, 357
Hsp92I GRCGYC 1 cut(s) 336
Hsp92II CATG 9 cut(s) 111, 395, 515, 733, 900, 921, 1128, 1501, 1522
HspAI GCGC 1 cut(s) 39
Kzo9I GATC 2 cut(s) 1417, 1447
LmnI GCTCC 2 cut(s) 997, 1170
Lsp1109I GCAGC 5 cut(s) 280, 755, 758, 761, 993
LweI GCATC 7 cut(s) 108, 724, 904, 1018, 1109, 1168, 1490
MaeI CTAG 4 cut(s) 174, 507, 1149, 1190
MaeII ACGT 3 cut(s) 147, 225, 357
MaeIII GTNAC 5 cut(s) 84, 150, 358, 960, 1208
MalI GATC 2 cut(s) 1419, 1449
MbiI CCGCTC 1 cut(s) 205
MboI GATC 2 cut(s) 1417, 1447
MboII GAAGA 5 cut(s) 138, 325, 328, 843, 1036
MfeI CAATTG 1 cut(s) 1200
MhlI GDGCHC 4 cut(s) 242, 546, 994, 1380
MlsI TGGCCA 1 cut(s) 230
MluCI AATT 7 cut(s) 233, 462, 692, 782, 984, 1133, 1200
MluNI TGGCCA 1 cut(s) 230
MlyI GAGTC 2 cut(s) 653, 1072
MmeI TCCRAC 1 cut(s) 1490
Mox20I TGGCCA 1 cut(s) 230
Mph1103I ATGCAT 2 cut(s) 739, 919
MscI TGGCCA 1 cut(s) 230
MseI TTAA 3 cut(s) 702, 824, 983
Msp20I TGGCCA 1 cut(s) 230
MspA1I CMGCKG 1 cut(s) 1310
MspI CCGG 6 cut(s) 192, 294, 308, 698, 1237, 1435
MspR9I CCNGG 3 cut(s) 265, 294, 309
MunI CAATTG 1 cut(s) 1200
Mva1269I GAATGC 1 cut(s) 455
MvaI CCWGG 1 cut(s) 265
MvnI CGCG 1 cut(s) 39
MwoI GCNNNNNNNGC 5 cut(s) 268, 682, 743, 749, 923
NciI CCSGG 2 cut(s) 294, 309
NdeI CATATG 1 cut(s) 489
NdeII GATC 2 cut(s) 1417, 1447
NlaIII CATG 9 cut(s) 111, 395, 515, 733, 900, 921, 1128, 1501, 1522
NlaIV GGNNCC 3 cut(s) 240, 419, 1439
NmuCI GTSAC 5 cut(s) 84, 150, 358, 960, 1208
NsiI ATGCAT 2 cut(s) 739, 919
NspI RCATGY 2 cut(s) 111, 921
NspV TTCGAA 1 cut(s) 1454
PceI AGGCCT 1 cut(s) 505
PciI ACATGT 1 cut(s) 107
PctI GAATGC 1 cut(s) 455
PfeI GAWTC 2 cut(s) 129, 1513
PflFI GACNNNGTC 1 cut(s) 335
PflMI CCANNNNNTGG 1 cut(s) 1280
PkrI GCNGC 8 cut(s) 201, 204, 270, 285, 745, 748, 751, 1008
PleI GAGTC 2 cut(s) 653, 1072
PmaCI CACGTG 2 cut(s) 148, 226
PmlI CACGTG 2 cut(s) 148, 226
PpsI GAGTC 2 cut(s) 653, 1072
Ppu21I YACGTR 2 cut(s) 148, 226
PpuMI RGGWCCY 1 cut(s) 776
PscI ACATGT 1 cut(s) 107
Psp124BI GAGCTC 1 cut(s) 1380
Psp5II RGGWCCY 1 cut(s) 776
Psp6I CCWGG 1 cut(s) 263
PspCI CACGTG 2 cut(s) 148, 226
PspEI GGTNACC 1 cut(s) 960
PspGI CCWGG 1 cut(s) 263
PspN4I GGNNCC 3 cut(s) 240, 419, 1439
PspOMI GGGCCC 1 cut(s) 238
PspPI GGNCC 7 cut(s) 194, 238, 239, 254, 417, 776, 1103
PspPPI RGGWCCY 1 cut(s) 776
PstI CTGCAG 1 cut(s) 861
PstNI CAGNNNCTG 1 cut(s) 1280
PsyI GACNNNGTC 1 cut(s) 335
RsaI GTAC 7 cut(s) 160, 608, 653, 941, 1292, 1323, 1383
RsaNI GTAC 7 cut(s) 159, 607, 652, 940, 1291, 1322, 1382
Rsr2I CGGWCCG 1 cut(s) 194
RsrII CGGWCCG 1 cut(s) 194
SacI GAGCTC 1 cut(s) 1380
SalI GTCGAC 1 cut(s) 297
SaqAI TTAA 3 cut(s) 702, 824, 983
SatI GCNGC 8 cut(s) 200, 203, 269, 284, 744, 747, 750, 1007
Sau3AI GATC 2 cut(s) 1417, 1447
Sau96I GGNCC 7 cut(s) 194, 238, 239, 254, 417, 776, 1103
SchI GAGTC 2 cut(s) 653, 1072
ScrFI CCNGG 3 cut(s) 265, 294, 309
SduI GDGCHC 4 cut(s) 242, 546, 994, 1380
SfaNI GCATC 7 cut(s) 108, 724, 904, 1018, 1109, 1168, 1490
SfcI CTRYAG 3 cut(s) 857, 1286, 1443
SfuI TTCGAA 1 cut(s) 1454
SinI GGWCC 4 cut(s) 194, 417, 776, 1103
SmlI CTYRAG 2 cut(s) 377, 1257
SmoI CTYRAG 2 cut(s) 377, 1257
Sse9I AATT 7 cut(s) 233, 462, 692, 782, 984, 1133, 1200
SseBI AGGCCT 1 cut(s) 505
SspI AATATT 1 cut(s) 1393
SspMI CTAG 4 cut(s) 174, 507, 1149, 1190
SstI GAGCTC 1 cut(s) 1380
StuI AGGCCT 1 cut(s) 505
StyD4I CCNGG 3 cut(s) 263, 292, 307
StyI CCWWGG 1 cut(s) 966
TaaI ACNGT 2 cut(s) 70, 1290
TaiI ACGT 3 cut(s) 150, 228, 360
TaqI TCGA 6 cut(s) 218, 298, 551, 1263, 1269, 1454
TaqII GACCGA 1 cut(s) 405
TasI AATT 7 cut(s) 233, 462, 692, 782, 984, 1133, 1200
TatI WGTACW 4 cut(s) 158, 651, 1290, 1321
TauI GCSGC 3 cut(s) 202, 205, 286
TfiI GAWTC 2 cut(s) 129, 1513
Tru1I TTAA 3 cut(s) 702, 824, 983
Tru9I TTAA 3 cut(s) 702, 824, 983
TscAI CASTG 3 cut(s) 412, 817, 877
TseFI GTSAC 5 cut(s) 84, 150, 358, 960, 1208
TseI GCWGC 5 cut(s) 268, 743, 746, 749, 1006
Tsp45I GTSAC 5 cut(s) 84, 150, 358, 960, 1208
TspDTI ATGAA 5 cut(s) 537, 779, 786, 1163, 1514
TspGWI ACGGA 3 cut(s) 72, 1043, 1157
TspRI CASTG 3 cut(s) 412, 817, 877
Tth111I GACNNNGTC 1 cut(s) 335
Van91I CCANNNNNTGG 1 cut(s) 1280
VpaK11BI GGWCC 4 cut(s) 194, 417, 776, 1103
XceI RCATGY 2 cut(s) 111, 921
XmiI GTMKAC 1 cut(s) 298
XspI CTAG 4 cut(s) 174, 507, 1149, 1190
Zsp2I ATGCAT 2 cut(s) 739, 919
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.