Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000007

Orthogroup ID

OG0013152

Physical Location & Seq

Genomic Coordinates Forward (+)

32020332 .. 32027958

Gene Structure 7627 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug07G0316200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2040 bp

ATGTCTGAAGAGGCTGGAGTAATGTTAGTGGTTTATGATGATCCCTCAGACCAACGATCTTTCTCTTTGGATGATACCAGCAGCAGTGAGGAATCACTTGATGAAACTAGGCTTTCTCTAGAGACCACAAACGATGTGATTCCGTATATTGGAAAAAGGTTTGCTACTCACGATGCAGCTTATGAGTACTACAGTGAATTTGCAAAGCAATGTGGATTCTCAATCCGGCGACACCGTACGGAGGGAAAAGATGGGGTGGGCAAGGGACTTACAAGACGCTACTTTGTCTGCCACCGTGCTGGAAACACTCCGAGTAAAACCTCCAACGAAAGTAAGCCTCAAAGAAATAGAAAATCCTCCCGGTGTGGATGTCAAGCATACATGCGGATAAGCAAGACAACAGAATTGGGTGCATCAGAATGGCGTGTCACGGGTTTTGCGAACCACCATAATCATGAACTTTTGGAACCAAACCAAGTTCGTTTCCTTCCTGCATACCGAACTATATCCGAGTCTGATAAGAGCCGGATCCTTATGTTTGCCAAGACAGGAATTTCAGTACAGCAAATGATGAGGCTCATGGAGCTTGAGAAGTGTGTTGAACCAGGTTATTTACCCTTTACTGAAAAGGATGTGAGAAATTTGCTCCAGTCATTTAGGAAATTAGATCCGGAAGAGGAGAGCATAGACTTGTTAAGAATGTGCAGAAACATCAAGGAGAAAGATCCGAACTTCAAATTTGAGTACACAATTGACTCAAAGAACAGATTAGAGAATATTGCATGGTCATATGCATCCTCAGTACAGTCATATGAGATATTTGGAGATGCAGTAGTGTTTGATACCACTCATCGCTTAACTGCGTTTGACATGCCACTTGGGATATGGGTTGGAATAAATAATTATGGTATGCCTTGCTTCTTTGGCTGTGTGCTTCTACGAGAGGAAAGTGGAAGGTCATTTTCATGGGCATTGAAGGCATTCCTGGGGTTCATGTATGGGAAGGCACCACGGACCATATTAACTGATCAAAATTTATTTCTGAAAGAAGCAATAAGTGCAGAGATGCCAACAACTAAACACGCACTATGCGTATGGATGATAGTTGCGAAGTTTCCTTCCTGGTTCAATGCTGTTTTGGGTGAACGTTACAATGAGTGGAAGAGTGAGTTTTATCGCATTTACAATTTGGAGTCCATAGAGGATTTCGAACTAGGGTGGAGGGACTTGGTAAATTCTTTTGGGCTTCACTCAAACAGGCACATAGTCAACTTGTATGGCCTACGCTCACTTTGGGCTCTACCATTCTTGAGAAGCCATTTCTTTGCAGGAATGGCTACAATTGGTCAGTCGAAGTCAATTAATGCATTCATCCAACGATTTTTGAGTGCACAAACTCGGCTGGCGCACTTCATTGAACAAGTGGCTGTTGCTGTGGATTTTAAAGATCAAGCTGGAGAACAACAAACAATGCAACAGAATCTCCAAAACATATGCCTGAAAACAGGAGCACCGATGGAATCCCATGCTGCCTCAGTTCTTACTCCTTATGCATTCTCTAAGCTTCAAGAACAACTTGTTTTGGCTGCTCACTATGCATCTTTCCAAATGGATGATGGTTTTCTTGTTCGACATCACACAAAAGGTGATGGAGGCCGAAAAGTGTATTGGGTTCCTCGGGAAGGCATCATAAGTTGCAGTTGCCATCATTTTGAGTTCTCAGGGACCCTTTGTCGGCATGCACTTCGAGTTCTCTCAACGGGAAATTGCTTTCAGATTCCGGATAGATATCTTCCTGTCCGTTGGCGTCGGATCAGCATGCCTTCTGCAAAACTCCTTCATAGTGTTCCAAGTGATCATGCAGAAAGAATACAGCTGTTACAAAGTATGGTCTCAACTCTGGTAACAGAATCTTCAAAGTCTAGGGAGAGGCTAGGTATAGCAACTGAGCAGGTCTCGATCCTCTTATCTCAGATAAGAGAGCAGCCTGTTTCATTACAAAGTACGAGAGACATTACACCGAAGAATAGGAATATATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006873 GO:0006875 GO:0006883 GO:0008150 GO:0009889 GO:0009987 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0019725 GO:0030003 GO:0030004 GO:0030007 GO:0031323 GO:0031326 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043433 GO:0044092 GO:0044424 GO:0044464 GO:0047484 GO:0048519 GO:0048583 GO:0048585 GO:0048878 GO:0050789 GO:0050794 GO:0050801 GO:0051090 GO:0051171 GO:0051252 GO:0055065 GO:0055067 GO:0055075 GO:0055078 GO:0055080 GO:0055082 GO:0060255 GO:0065007 GO:0065008 GO:0065009 GO:0080090 GO:0080134 GO:0098771 GO:1901000 GO:1901001 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Protein Analysis

679

Amino Acids

77.81

Weight (kDa)

8.51

Isoelectric Point (pI)

49.91

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FAR1	PF03101	62 - 155	1.1e-18	FAR1 DNA-binding domain
HTH_FAR1	PF26175	168 - 223	8.3e-26	FAR1 HTH-like domain
MULE	PF10551	278 - 370	1.7e-17	MULE transposase domain
SWIM	PF04434	561 - 587	6.6e-07	SWIM zinc finger

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013152)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G78310
fragaria_vesca	FvH4_5g36700
malus_domestica	MD08G1187500.v1.1 MD15G1373500.v1.1
prunus_persica	Prupe.1G522100_v2.0.a1
pyrus_communis	pycom15g33460
rosa_chinensis	RchiOBHm_Chr7g0242681
rosa_laevigata	RLG00000000888
rosa_multiflora	Rmu_co8298747.1_g000001 Rmu_sc0014793.1_g000001
rosa_roxburghii	Rroxscaffold_3G00222590
rosa_rugosa	Rorug07G0316200
rosa_samantha	Rh7AG471200 Rh7BG441500 Rh7CG488200 Rh7DG456800
rosa_wichuraiana	Rw0G005450 Rw7G039240

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1942
AccB1I	GGYRCC	1 cut(s)	1006
AccIII	TCCGGA	2 cut(s)	670, 1780
AciI	CCGC	1 cut(s)	385
AclI	AACGTT	1 cut(s)	1147
AclWI	GGATC	7 cut(s)	35, 523, 536, 662, 719, 1820, 1954
AcsI	RAATTY	6 cut(s)	197, 552, 640, 737, 1033, 1234
AcuI	CTGAAG	1 cut(s)	27
AcyI	GRCGYC	1 cut(s)	1807
AfaI	GTAC	6 cut(s)	188, 238, 561, 746, 804, 2005
AfiI	CCNNNNNNNGG	4 cut(s)	149, 241, 1682, 1734
AgsI	TTSAA	7 cut(s)	602, 736, 976, 1129, 1418, 1568, 1917
AhdI	GACNNNNNGTC	1 cut(s)	1731
AjnI	CCWGG	3 cut(s)	604, 984, 1121
AjuI	GAANNNNNNNTTGG	2 cut(s)	1651, 1683
AluBI	AGCT	5 cut(s)	179, 586, 1454, 1564, 1876
AluI	AGCT	5 cut(s)	179, 586, 1454, 1564, 1876
Alw21I	GWGCWC	2 cut(s)	1393, 1513
Alw26I	GTCTC	4 cut(s)	116, 1897, 1960, 2004
Alw44I	GTGCAC	1 cut(s)	1389
AlwI	GGATC	7 cut(s)	35, 523, 536, 662, 719, 1820, 1954
Ama87I	CYCGRG	1 cut(s)	1677
Aor13HI	TCCGGA	2 cut(s)	670, 1780
AoxI	GGCC	2 cut(s)	1279, 1654
ApaLI	GTGCAC	1 cut(s)	1389
ApeKI	GCWGC	5 cut(s)	81, 176, 1529, 1586, 1984
ApoI	RAATTY	6 cut(s)	197, 552, 640, 737, 1033, 1234
AseI	ATTAAT	1 cut(s)	1362
Asp700I	GAANNNNTTC	1 cut(s)	980
AspLEI	GCGC	1 cut(s)	1408
AspS9I	GGNCC	2 cut(s)	1014, 1725
AsuC2I	CCSGG	1 cut(s)	361
AsuHPI	GGTGA	2 cut(s)	1154, 1658
AsuII	TTCGAA	1 cut(s)	1209
AvaI	CYCGRG	1 cut(s)	1677
AvaII	GGWCC	2 cut(s)	1014, 1725
BaeGI	GKGCMC	1 cut(s)	1393
BamHI	GGATCC	1 cut(s)	528
BanI	GGYRCC	1 cut(s)	1006
BanII	GRGCYC	1 cut(s)	1300
Bbv12I	GWGCWC	2 cut(s)	1393, 1513
BbvI	GCAGC	5 cut(s)	93, 188, 1516, 1573, 1996
BccI	CCATC	5 cut(s)	245, 1510, 1610, 1643, 1713
BcgI	CGANNNNNNTGC	2 cut(s)	1727, 1761
BciT130I	CCWGG	3 cut(s)	606, 986, 1123
BclI	TGATCA	2 cut(s)	1027, 1855
BcnI	CCSGG	1 cut(s)	361
BcoDI	GTCTC	4 cut(s)	116, 1897, 1960, 2004
BfaI	CTAG	5 cut(s)	108, 119, 1214, 1923, 1934
BfmI	CTRYAG	1 cut(s)	190
BfuAI	ACCTGC	1 cut(s)	1942
BisI	GCNGC	5 cut(s)	82, 177, 1530, 1587, 1985
BlsI	GCNGC	5 cut(s)	83, 178, 1531, 1588, 1986
BmcAI	AGTACT	1 cut(s)	188
Bme1390I	CCNGG	4 cut(s)	361, 606, 986, 1123
Bme18I	GGWCC	2 cut(s)	1014, 1725
BmeRI	GACNNNNNGTC	1 cut(s)	1731
BmeT110I	CYCGRG	1 cut(s)	1677
BmgT120I	GGNCC	2 cut(s)	1014, 1725
BmiI	GGNNCC	6 cut(s)	468, 530, 1008, 1674, 1726, 1727
BmrFI	CCNGG	4 cut(s)	361, 606, 986, 1123
BmsI	GCATC	7 cut(s)	163, 422, 803, 817, 1056, 1607, 1695
BplI	GAGNNNNNCTC	2 cut(s)	1940, 1972
BpmI	CTGGAG	3 cut(s)	36, 632, 1476
Bpu14I	TTCGAA	1 cut(s)	1209
BpuEI	CTTGAG	2 cut(s)	608, 1330
BpuMI	CCSGG	1 cut(s)	361
BsaBI	GATNNNNATC	1 cut(s)	1788
BsaHI	GRCGYC	1 cut(s)	1807
BsaI	GGTCTC	3 cut(s)	116, 1897, 1960
BsaJI	CCNNGG	3 cut(s)	985, 1010, 1676
BsaWI	WCCGGW	2 cut(s)	670, 1780
BsaXI	ACNNNNNCTCC	4 cut(s)	816, 846, 1467, 1497
Bsc4I	CCNNNNNNNGG	4 cut(s)	149, 241, 1682, 1734
Bse1I	ACTGG	1 cut(s)	649
Bse3DI	GCAATG	1 cut(s)	215
Bse8I	GATNNNNATC	1 cut(s)	1788
BseAI	TCCGGA	2 cut(s)	670, 1780
BseBI	CCWGG	3 cut(s)	606, 986, 1123
BseDI	CCNNGG	3 cut(s)	985, 1010, 1676
BseGI	GGATG	7 cut(s)	76, 374, 637, 794, 1104, 1371, 1618
BseJI	GATNNNNATC	1 cut(s)	1788
BseLI	CCNNNNNNNGG	4 cut(s)	149, 241, 1682, 1734
BseMI	GCAATG	1 cut(s)	215
BseMII	CTCAG	6 cut(s)	60, 813, 1548, 1734, 1938, 1985
BseNI	ACTGG	1 cut(s)	649
BseRI	GAGGAG	1 cut(s)	692
BseSI	GKGCMC	1 cut(s)	1393
BseXI	GCAGC	5 cut(s)	93, 188, 1516, 1573, 1996
BsgI	GTGCAG	2 cut(s)	724, 1080
BshFI	GGCC	2 cut(s)	1281, 1656
BshNI	GGYRCC	1 cut(s)	1006
BsiHKAI	GWGCWC	2 cut(s)	1393, 1513
BsiHKCI	CYCGRG	1 cut(s)	1677
BsiSI	CCGG	5 cut(s)	226, 361, 526, 671, 1781
BsiWI	CGTACG	1 cut(s)	236
BslFI	GGGAC	3 cut(s)	279, 1238, 1738
BslI	CCNNNNNNNGG	4 cut(s)	149, 241, 1682, 1734
BsmAI	GTCTC	4 cut(s)	116, 1897, 1960, 2004
BsmFI	GGGAC	3 cut(s)	279, 1238, 1738
BsmI	GAATGC	3 cut(s)	980, 1367, 1553
BsnI	GGCC	2 cut(s)	1281, 1656
Bso31I	GGTCTC	3 cut(s)	116, 1897, 1960
BsoBI	CYCGRG	1 cut(s)	1677
Bsp119I	TTCGAA	1 cut(s)	1209
Bsp1286I	GDGCHC	3 cut(s)	1300, 1393, 1513
Bsp13I	TCCGGA	2 cut(s)	670, 1780
BspACI	CCGC	1 cut(s)	385
BspANI	GGCC	2 cut(s)	1281, 1656
BspCNI	CTCAG	6 cut(s)	59, 812, 1547, 1733, 1939, 1984
BspEI	TCCGGA	2 cut(s)	670, 1780
BspHI	TCATGA	1 cut(s)	454
BspLI	GGNNCC	6 cut(s)	468, 530, 1008, 1674, 1726, 1727
BspMI	ACCTGC	1 cut(s)	1942
BspPI	GGATC	7 cut(s)	35, 523, 536, 662, 719, 1820, 1954
BspT104I	TTCGAA	1 cut(s)	1209
BspT107I	GGYRCC	1 cut(s)	1006
BspTNI	GGTCTC	3 cut(s)	116, 1897, 1960
BsrDI	GCAATG	1 cut(s)	215
BsrI	ACTGG	1 cut(s)	649
BssECI	CCNNGG	3 cut(s)	985, 1010, 1676
BssNI	GRCGYC	1 cut(s)	1807
Bst2UI	CCWGG	3 cut(s)	606, 986, 1123
Bst4CI	ACNGT	4 cut(s)	194, 236, 296, 807
Bst6I	CTCTTC	3 cut(s)	3, 669, 1157
BstACI	GRCGYC	1 cut(s)	1807
BstAPI	GCANNNNNTGC	1 cut(s)	1058
BstBI	TTCGAA	1 cut(s)	1209
BstC8I	GCNNGC	3 cut(s)	1404, 1740, 1820
BstDEI	CTNAG	7 cut(s)	46, 799, 1534, 1560, 1720, 1947, 1971
BstDSI	CCRYGG	1 cut(s)	1010
BstENI	CCTNNNNNAGG	1 cut(s)	1680
BstF5I	GGATG	7 cut(s)	76, 374, 637, 794, 1104, 1371, 1618
BstHHI	GCGC	1 cut(s)	1408
BstMAI	GTCTC	4 cut(s)	116, 1897, 1960, 2004
BstMWI	GCNNNNNNNGC	6 cut(s)	583, 924, 977, 1058, 1334, 1595
BstNI	CCWGG	3 cut(s)	606, 986, 1123
BstNSI	RCATGY	4 cut(s)	385, 874, 1742, 1822
BstSCI	CCNGG	4 cut(s)	359, 604, 984, 1121
BstSFI	CTRYAG	1 cut(s)	190
BstSLI	GKGCMC	1 cut(s)	1393
BstV1I	GCAGC	5 cut(s)	93, 188, 1516, 1573, 1996
BstX2I	RGATCY	3 cut(s)	528, 667, 724
BstXI	CCANNNNNNTGG	1 cut(s)	299
BstYI	RGATCY	3 cut(s)	528, 667, 724
BsuRI	GGCC	2 cut(s)	1281, 1656
BtgI	CCRYGG	1 cut(s)	1010
BtgZI	GCGATG	1 cut(s)	836
BtsCI	GGATG	7 cut(s)	76, 374, 637, 794, 1104, 1371, 1618
BtsI	GCAGTG	1 cut(s)	91
BtsIMutI	CAGTG	2 cut(s)	91, 199
BveI	ACCTGC	1 cut(s)	1942
Cac8I	GCNNGC	3 cut(s)	1404, 1740, 1820
CciI	TCATGA	1 cut(s)	454
CfoI	GCGC	1 cut(s)	1408
Cfr13I	GGNCC	2 cut(s)	1014, 1725
CseI	GACGC	2 cut(s)	285, 1796
CsiI	ACCWGGT	1 cut(s)	604
Csp6I	GTAC	6 cut(s)	187, 237, 560, 745, 803, 2004
CviQI	GTAC	6 cut(s)	187, 237, 560, 745, 803, 2004
DdeI	CTNAG	7 cut(s)	46, 799, 1534, 1560, 1720, 1947, 1971
DraI	TTTAAA	1 cut(s)	1444
DriI	GACNNNNNGTC	1 cut(s)	1731
Eam1104I	CTCTTC	3 cut(s)	3, 669, 1157
Eam1105I	GACNNNNNGTC	1 cut(s)	1731
EarI	CTCTTC	3 cut(s)	3, 669, 1157
Eco24I	GRGCYC	1 cut(s)	1300
Eco31I	GGTCTC	3 cut(s)	116, 1897, 1960
Eco32I	GATATC	1 cut(s)	1790
Eco47I	GGWCC	2 cut(s)	1014, 1725
Eco57I	CTGAAG	1 cut(s)	27
Eco88I	CYCGRG	1 cut(s)	1677
EcoNI	CCTNNNNNAGG	1 cut(s)	1680
EcoO109I	RGGNCCY	1 cut(s)	1725
EcoRII	CCWGG	3 cut(s)	604, 984, 1121
EcoRV	GATATC	1 cut(s)	1790
EcoT22I	ATGCAT	4 cut(s)	796, 1369, 1555, 1600
EcoT38I	GRGCYC	1 cut(s)	1300
FalI	AAGNNNNNCTT	2 cut(s)	1560, 1592
FaqI	GGGAC	3 cut(s)	279, 1238, 1738
FauNDI	CATATG	3 cut(s)	790, 811, 1493
FbaI	TGATCA	2 cut(s)	1027, 1855
Fnu4HI	GCNGC	5 cut(s)	82, 177, 1530, 1587, 1985
FokI	GGATG	7 cut(s)	83, 381, 644, 781, 1111, 1358, 1625
FriOI	GRGCYC	1 cut(s)	1300
Fsp4HI	GCNGC	5 cut(s)	82, 177, 1530, 1587, 1985
FspBI	CTAG	5 cut(s)	108, 119, 1214, 1923, 1934
GlaI	GCGC	1 cut(s)	1407
GluI	GCNGC	5 cut(s)	82, 177, 1530, 1587, 1985
GsuI	CTGGAG	3 cut(s)	36, 632, 1476
HaeIII	GGCC	2 cut(s)	1281, 1656
HapII	CCGG	5 cut(s)	226, 361, 526, 671, 1781
HgaI	GACGC	2 cut(s)	285, 1796
HhaI	GCGC	1 cut(s)	1408
Hin1I	GRCGYC	1 cut(s)	1807
Hin6I	GCGC	1 cut(s)	1406
HinP1I	GCGC	1 cut(s)	1406
HincII	GTYRAC	1 cut(s)	1270
HindII	GTYRAC	1 cut(s)	1270
HindIII	AAGCTT	1 cut(s)	1562
HpaII	CCGG	5 cut(s)	226, 361, 526, 671, 1781
HphI	GGTGA	2 cut(s)	1154, 1658
Hpy166II	GTNNAC	4 cut(s)	747, 1145, 1270, 1391
Hpy188III	TCNNGA	9 cut(s)	119, 170, 455, 671, 1309, 1568, 1679, 1781, 1957
Hpy8I	GTNNAC	4 cut(s)	747, 1145, 1270, 1391
Hpy99I	CGWCG	1 cut(s)	1812
HpyAV	CCTTC	8 cut(s)	497, 948, 970, 997, 1128, 1676, 1833, 1847
HpyCH4III	ACNGT	4 cut(s)	194, 236, 296, 807
HpyCH4IV	ACGT	1 cut(s)	1147
HpyF10VI	GCNNNNNNNGC	6 cut(s)	583, 924, 977, 1058, 1334, 1595
HpyF3I	CTNAG	7 cut(s)	46, 799, 1534, 1560, 1720, 1947, 1971
HpySE526I	ACGT	1 cut(s)	1147
Hsp92I	GRCGYC	1 cut(s)	1807
HspAI	GCGC	1 cut(s)	1406
KflI	GGGWCCC	1 cut(s)	1725
Kpn2I	TCCGGA	2 cut(s)	670, 1780
Ksp22I	TGATCA	2 cut(s)	1027, 1855
LmnI	GCTCC	3 cut(s)	583, 651, 1508
Lsp1109I	GCAGC	5 cut(s)	93, 188, 1516, 1573, 1996
LweI	GCATC	7 cut(s)	163, 422, 803, 817, 1056, 1607, 1695
MabI	ACCWGGT	1 cut(s)	604
MaeI	CTAG	5 cut(s)	108, 119, 1214, 1923, 1934
MaeII	ACGT	1 cut(s)	1147
MaeIII	GTNAC	4 cut(s)	427, 1148, 1878, 1903
MboII	GAAGA	6 cut(s)	20, 686, 1174, 1784, 1905, 2035
MfeI	CAATTG	2 cut(s)	750, 1341
MflI	RGATCY	3 cut(s)	528, 667, 724
MhlI	GDGCHC	3 cut(s)	1300, 1393, 1513
MlyI	GAGTC	3 cut(s)	521, 749, 1202
MmeI	TCCRAC	4 cut(s)	348, 871, 1399, 1790
Mph1103I	ATGCAT	4 cut(s)	796, 1369, 1555, 1600
MroI	TCCGGA	2 cut(s)	670, 1780
MroXI	GAANNNNTTC	1 cut(s)	980
MseI	TTAA	5 cut(s)	695, 857, 1022, 1362, 1443
MslI	CAYNNNNRTG	3 cut(s)	418, 453, 964
MspA1I	CMGCKG	1 cut(s)	1876
MspI	CCGG	5 cut(s)	226, 361, 526, 671, 1781
MspR9I	CCNGG	4 cut(s)	361, 606, 986, 1123
MunI	CAATTG	2 cut(s)	750, 1341
Mva1269I	GAATGC	3 cut(s)	980, 1367, 1553
MvaI	CCWGG	3 cut(s)	606, 986, 1123
MwoI	GCNNNNNNNGC	6 cut(s)	583, 924, 977, 1058, 1334, 1595
NciI	CCSGG	1 cut(s)	361
NdeI	CATATG	3 cut(s)	790, 811, 1493
NlaIV	GGNNCC	6 cut(s)	468, 530, 1008, 1674, 1726, 1727
NmeAIII	GCCGAG	1 cut(s)	1378
NmuCI	GTSAC	1 cut(s)	427
NsiI	ATGCAT	4 cut(s)	796, 1369, 1555, 1600
NspI	RCATGY	4 cut(s)	385, 874, 1742, 1822
NspV	TTCGAA	1 cut(s)	1209
PaeI	GCATGC	2 cut(s)	1742, 1822
PagI	TCATGA	1 cut(s)	454
PcsI	WCGNNNNNNNCGW	2 cut(s)	437, 1089
PctI	GAATGC	3 cut(s)	980, 1367, 1553
PdmI	GAANNNNTTC	1 cut(s)	980
PfeI	GAWTC	7 cut(s)	92, 139, 216, 1480, 1520, 1777, 1910
Pfl23II	CGTACG	1 cut(s)	236
PkrI	GCNGC	5 cut(s)	83, 178, 1531, 1588, 1986
PleI	GAGTC	3 cut(s)	520, 749, 1201
PpsI	GAGTC	3 cut(s)	520, 749, 1201
PpuMI	RGGWCCY	1 cut(s)	1725
PshBI	ATTAAT	1 cut(s)	1362
Psp1406I	AACGTT	1 cut(s)	1147
Psp5II	RGGWCCY	1 cut(s)	1725
Psp6I	CCWGG	3 cut(s)	604, 984, 1121
PspGI	CCWGG	3 cut(s)	604, 984, 1121
PspLI	CGTACG	1 cut(s)	236
PspN4I	GGNNCC	6 cut(s)	468, 530, 1008, 1674, 1726, 1727
PspPI	GGNCC	2 cut(s)	1014, 1725
PspPPI	RGGWCCY	1 cut(s)	1725
PsuI	RGATCY	3 cut(s)	528, 667, 724
PvuII	CAGCTG	1 cut(s)	1876
RsaI	GTAC	6 cut(s)	188, 238, 561, 746, 804, 2005
RsaNI	GTAC	6 cut(s)	187, 237, 560, 745, 803, 2004
RseI	CAYNNNNRTG	3 cut(s)	418, 453, 964
SaqAI	TTAA	5 cut(s)	695, 857, 1022, 1362, 1443
SatI	GCNGC	5 cut(s)	82, 177, 1530, 1587, 1985
Sau96I	GGNCC	2 cut(s)	1014, 1725
ScaI	AGTACT	1 cut(s)	188
SchI	GAGTC	3 cut(s)	521, 749, 1202
ScrFI	CCNGG	4 cut(s)	361, 606, 986, 1123
SduI	GDGCHC	3 cut(s)	1300, 1393, 1513
SexAI	ACCWGGT	1 cut(s)	604
SfaNI	GCATC	7 cut(s)	163, 422, 803, 817, 1056, 1607, 1695
SfcI	CTRYAG	1 cut(s)	190
SfuI	TTCGAA	1 cut(s)	1209
SinI	GGWCC	2 cut(s)	1014, 1725
SmiMI	CAYNNNNRTG	3 cut(s)	418, 453, 964
SmlI	CTYRAG	2 cut(s)	587, 1309
SmoI	CTYRAG	2 cut(s)	587, 1309
SphI	GCATGC	2 cut(s)	1742, 1822
SsiI	CCGC	1 cut(s)	385
SspI	AATATT	1 cut(s)	778
SspMI	CTAG	5 cut(s)	108, 119, 1214, 1923, 1934
StyD4I	CCNGG	4 cut(s)	359, 604, 984, 1121
TaaI	ACNGT	4 cut(s)	194, 236, 296, 807
TaiI	ACGT	1 cut(s)	1150
TaqI	TCGA	5 cut(s)	1209, 1352, 1630, 1747, 1958
TatI	WGTACW	4 cut(s)	186, 559, 744, 802
TfiI	GAWTC	7 cut(s)	92, 139, 216, 1480, 1520, 1777, 1910
Tru1I	TTAA	5 cut(s)	695, 857, 1022, 1362, 1443
Tru9I	TTAA	5 cut(s)	695, 857, 1022, 1362, 1443
TscAI	CASTG	2 cut(s)	91, 199
TseFI	GTSAC	1 cut(s)	427
TseI	GCWGC	5 cut(s)	81, 176, 1529, 1586, 1984
Tsp45I	GTSAC	1 cut(s)	427
TspDTI	ATGAA	8 cut(s)	117, 471, 954, 982, 1360, 1402, 1829, 1983
TspGWI	ACGGA	4 cut(s)	132, 254, 1027, 1790
TspRI	CASTG	2 cut(s)	91, 199
VneI	GTGCAC	1 cut(s)	1389
VpaK11BI	GGWCC	2 cut(s)	1014, 1725
VspI	ATTAAT	1 cut(s)	1362
XagI	CCTNNNNNAGG	1 cut(s)	1680
XapI	RAATTY	6 cut(s)	197, 552, 640, 737, 1033, 1234
XbaI	TCTAGA	1 cut(s)	118
XceI	RCATGY	4 cut(s)	385, 874, 1742, 1822
XcmI	CCANNNNNNNNNTGG	2 cut(s)	882, 1613
XmnI	GAANNNNTTC	1 cut(s)	980
XspI	CTAG	5 cut(s)	108, 119, 1214, 1923, 1934
ZrmI	AGTACT	1 cut(s)	188
Zsp2I	ATGCAT	4 cut(s)	796, 1369, 1555, 1600

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.