Rorug07G0322900

5'-adenylylsulfate reductase-like 4

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
Physical Location & Seq
Forward (+)
33273435 .. 33275669
2235 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0322900.1

Sequence Viewer

Length: 1770 bp
ATGGAGAAATCTCAATGGATTGCAGGCGGACATAAGTACCATAGTCAACTCTGGTTTGTCCTAACAGCTTCCTTCCTTATATTCTTGGTATTGATTTGTACAGACTATTCCTCTCTAAACTCTGGAAGAAATTTCAATCGGGTCACCTATTTCATTACCAACTTTGAAAATGTAATTGCTACCCAAAACCAAGATCAACACCATCCCAGCTCTCTTCCTCCTCAAGCTACAGATTCTCAAACAGCCGATCAAACCAAGAGGATCAGTAATTCTAGTATTACTAATACATCTAGTAGCACTCCTGCTCCATTTTCTTTTGGCCATGAAAGACAACCAAATAATGTTACCAGCTCCAATGAAACTCAAATTGCAACTGTCAATAATATTCCACCACCACAGGCTATACCTAATACCAAGCACCAAATCTCTGATTCTGATTCGTGTTCGGGTCGATACATTTATGTTTATGATCTTCCAAAAAGGTTCAACCAGGACTTGCTCAAGAATTGCCATTCCCTTCAGAGATGGACTGAAATGTGCCCCTACATGTCAAACATGGGTCTAGGGCCTAAACTAACTGAAAAATCTTCTAAGAGACGTGACCGATTATTGGGGGCCAAAGGTTGGTTTGCTACAAATCAGTTCTCATTAGAAGTTATTTTTCATAATAGGATGAAGAAGTACAAGTGCTTAACCAGTGATTCATCATTGGCCTCGGCAATATTTGTGCCCTTTTACGCTGGCCTTGATGTTGGTCGGTACCTCTGGGGCTACAACACATCTATCCGAGATGCTTCTCCTCTAGAATTGATGAAATGGCTTTCAAATAGACCTGAATGGAAGACAATGTGGGGTAAAGACCATTTCTTAGTTGGAGGCAGAATTGCATGGGATTTCAGGAGACAAACAGATAATGATTCTGATTGGGGATCCAAGCTCATGTTTTTGCCAGAATCCAAGAACATGACATTGTTGTCAATTGAATCAAGCTCTTGGAGCAACGAGCAGGCGATACCATACCCTACATACTTCCATCCCTCAAAGGAGAGTCAGGTGTCTAAGTGGCAGAGAAGAATGAGAAAGCGGAAGAGGCCATATCTCTTCACTTTTGCTGGTGCTCCAAGACCTGATTACAAAGAAAATATCCGGGATATGATTATAAGCCAATGCCAATCTTCAACCAAACAATGCAGACTTGTAGGGTGTTATCATGGTGCAAACAAGTGTGATGACCCTTTAGATTTGATGAAGGTGTTTCAATCGTCTGTATTCTGCCTGCAGCCTTCCGGGGACTCATTCACTCGTCGATCAATATTTGACTCCATCTTGGCAGGCTGCATTCCGGTTTTCTTCCATCCGGGTTCAGCTTATGTGCAGTACACATGGCACTTTCCCAGCAGCCCGTCTAAGTATTCAGTGTTTATATCAGAACATGATATCAAGGAGAAGAAGGTGATGATCAATGAGACATTGCTGAGAGTTCCCAAAGATGAAGTACTAGCAATGAGGGAGGAAGTTATAAGATTGATTCCGAAAATAATATATGCAGATCCAAGGGCATCTGGATTGGAGACATTTGAAGATGCATTTGACATAGCAGTTAAGGGACTACTTGACAAAGTAGAGAAAACTAGGAGGGACATGGAAGAGGGTAAAGATCCCGGTAATGCTTTCTCACTACTAAACGGTACCAAATTTGATATGCCTGGGACTAAGAGAAATGTATGGAAGATGAGAATGAAGGAGCTTCAAAAACAGAGAGAAATTTGA

Protein Analysis

589

Amino Acids

67.8

Weight (kDa)

9.24

Isoelectric Point (pI)

52.74

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Exostosin_GT47 PF03016 147 - 485 2.6e-82 Exostosin GT47 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1160, 1520
AasI GACNNNNNNGTC 1 cut(s) 973
Acc65I GGTACC 2 cut(s) 759, 1688
AccB1I GGYRCC 2 cut(s) 759, 1688
AccB7I CCANNNNNTGG 1 cut(s) 624
AciI CCGC 2 cut(s) 27, 1084
AclWI GGATC 5 cut(s) 269, 924, 937, 1544, 1652
AcoI YGGCCR 1 cut(s) 319
AcsI RAATTY 3 cut(s) 130, 1694, 1764
AcuI CTGAAG 1 cut(s) 503
AfaI GTAC 7 cut(s) 38, 100, 683, 761, 1379, 1497, 1690
AfiI CCNNNNNNNGG 2 cut(s) 610, 624
AflIII ACRYGT 1 cut(s) 546
AgsI TTSAA 9 cut(s) 136, 167, 487, 825, 983, 1179, 1259, 1580, 1751
AjiI CACGTC 1 cut(s) 599
AjnI CCWGG 2 cut(s) 489, 1705
AluBI AGCT 8 cut(s) 68, 210, 227, 351, 937, 990, 1367, 1747
AluI AGCT 8 cut(s) 68, 210, 227, 351, 937, 990, 1367, 1747
Alw21I GWGCWC 1 cut(s) 1120
Alw26I GTCTC 4 cut(s) 589, 895, 1460, 1565
AlwI GGATC 5 cut(s) 269, 924, 937, 1544, 1652
AoxI GGCC 6 cut(s) 319, 566, 615, 711, 742, 1091
ApeKI GCWGC 3 cut(s) 1279, 1335, 1398
ApoI RAATTY 3 cut(s) 130, 1694, 1764
Asp718I GGTACC 2 cut(s) 759, 1688
AspS9I GGNCC 2 cut(s) 566, 615
AsuC2I CCSGG 4 cut(s) 1148, 1288, 1359, 1662
AsuHPI GGTGA 2 cut(s) 136, 1465
BaeGI GKGCMC 2 cut(s) 542, 732
BaeI ACNNNNGTAYC 2 cut(s) 20, 53
BalI TGGCCA 1 cut(s) 321
BamHI GGATCC 1 cut(s) 929
BanI GGYRCC 2 cut(s) 759, 1688
BbsI GAAGAC 1 cut(s) 848
Bbv12I GWGCWC 1 cut(s) 1120
BbvI GCAGC 3 cut(s) 1291, 1322, 1410
BccI CCATC 5 cut(s) 210, 519, 1041, 1331, 1362
BciT130I CCWGG 2 cut(s) 491, 1707
BclI TGATCA 1 cut(s) 1458
BcnI CCSGG 4 cut(s) 1148, 1288, 1359, 1662
BcoDI GTCTC 4 cut(s) 589, 895, 1460, 1565
BfaI CTAG 6 cut(s) 273, 291, 563, 803, 1499, 1632
BfmI CTRYAG 2 cut(s) 228, 1277
BisI GCNGC 3 cut(s) 1280, 1336, 1399
BlsI GCNGC 3 cut(s) 1281, 1337, 1400
BmcAI AGTACT 1 cut(s) 1497
Bme1390I CCNGG 6 cut(s) 491, 1148, 1288, 1359, 1662, 1707
BmgBI CACGTC 1 cut(s) 599
BmgT120I GGNCC 2 cut(s) 566, 615
BmiI GGNNCC 4 cut(s) 616, 761, 931, 1690
BmrFI CCNGG 6 cut(s) 491, 1148, 1288, 1359, 1662, 1707
BmsI GCATC 3 cut(s) 781, 1568, 1573
BpiI GAAGAC 1 cut(s) 848
BpuEI CTTGAG 2 cut(s) 207, 485
BpuMI CCSGG 4 cut(s) 1148, 1288, 1359, 1662
BsaJI CCNNGG 4 cut(s) 714, 1287, 1553, 1706
BsaWI WCCGGW 1 cut(s) 1342
BsaXI ACNNNNNCTCC 2 cut(s) 289, 319
Bsc4I CCNNNNNNNGG 2 cut(s) 610, 624
Bse1I ACTGG 1 cut(s) 696
Bse3DI GCAATG 2 cut(s) 1469, 1509
BseBI CCWGG 2 cut(s) 491, 1707
BseDI CCNNGG 4 cut(s) 714, 1287, 1553, 1706
BseGI GGATG 4 cut(s) 202, 678, 1033, 1354
BseLI CCNNNNNNNGG 2 cut(s) 610, 624
BseMI GCAATG 2 cut(s) 1469, 1509
BseMII CTCAG 1 cut(s) 1466
BseNI ACTGG 1 cut(s) 696
BseRI GAGGAG 2 cut(s) 210, 789
BseSI GKGCMC 2 cut(s) 542, 732
BseXI GCAGC 3 cut(s) 1291, 1322, 1410
BseYI CCCAGC 2 cut(s) 206, 1394
BsgI GTGCAG 1 cut(s) 1394
BshFI GGCC 6 cut(s) 321, 568, 617, 713, 744, 1093
BshNI GGYRCC 2 cut(s) 759, 1688
BsiHKAI GWGCWC 1 cut(s) 1120
BsiSI CCGG 5 cut(s) 1147, 1287, 1343, 1358, 1662
BslFI GGGAC 4 cut(s) 1304, 1620, 1652, 1723
BslI CCNNNNNNNGG 2 cut(s) 610, 624
BsmAI GTCTC 4 cut(s) 589, 895, 1460, 1565
BsmBI CGTCTC 1 cut(s) 589
BsmFI GGGAC 4 cut(s) 1304, 1620, 1652, 1723
BsmI GAATGC 1 cut(s) 1338
BsnI GGCC 6 cut(s) 321, 568, 617, 713, 744, 1093
Bsp1286I GDGCHC 3 cut(s) 542, 732, 1120
Bsp1407I TGTACA 1 cut(s) 98
Bsp143I GATC 9 cut(s) 193, 247, 261, 469, 929, 1307, 1458, 1549, 1657
BspACI CCGC 2 cut(s) 27, 1084
BspANI GGCC 6 cut(s) 321, 568, 617, 713, 744, 1093
BspCNI CTCAG 1 cut(s) 1467
BspLI GGNNCC 4 cut(s) 616, 761, 931, 1690
BspMAI CTGCAG 1 cut(s) 1281
BspPI GGATC 5 cut(s) 269, 924, 937, 1544, 1652
BspT107I GGYRCC 2 cut(s) 759, 1688
BsrDI GCAATG 2 cut(s) 1469, 1509
BsrGI TGTACA 1 cut(s) 98
BsrI ACTGG 1 cut(s) 696
BssECI CCNNGG 4 cut(s) 714, 1287, 1553, 1706
BssMI GATC 9 cut(s) 193, 247, 261, 469, 929, 1307, 1458, 1549, 1657
BssT1I CCWWGG 1 cut(s) 1553
Bst2UI CCWGG 2 cut(s) 491, 1707
Bst4CI ACNGT 2 cut(s) 376, 1688
Bst6I CTCTTC 4 cut(s) 219, 1082, 1106, 1641
BstAUI TGTACA 1 cut(s) 98
BstC8I GCNNGC 5 cut(s) 25, 742, 1008, 1277, 1333
BstDEI CTNAG 6 cut(s) 591, 868, 1059, 1407, 1475, 1713
BstEII GGTNACC 1 cut(s) 142
BstF5I GGATG 4 cut(s) 202, 678, 1033, 1354
BstKTI GATC 9 cut(s) 196, 250, 264, 472, 932, 1310, 1461, 1552, 1660
BstMAI GTCTC 4 cut(s) 589, 895, 1460, 1565
BstMBI GATC 9 cut(s) 193, 247, 261, 469, 929, 1307, 1458, 1549, 1657
BstMWI GCNNNNNNNGC 2 cut(s) 996, 1090
BstNI CCWGG 2 cut(s) 491, 1707
BstNSI RCATGY 1 cut(s) 550
BstPI GGTNACC 1 cut(s) 142
BstSCI CCNGG 6 cut(s) 489, 1146, 1286, 1357, 1660, 1705
BstSFI CTRYAG 2 cut(s) 228, 1277
BstSLI GKGCMC 2 cut(s) 542, 732
BstV1I GCAGC 3 cut(s) 1291, 1322, 1410
BstV2I GAAGAC 1 cut(s) 848
BstX2I RGATCY 3 cut(s) 929, 1549, 1657
BstYI RGATCY 3 cut(s) 929, 1549, 1657
BsuRI GGCC 6 cut(s) 321, 568, 617, 713, 744, 1093
BtrI CACGTC 1 cut(s) 599
BtsCI GGATG 4 cut(s) 202, 678, 1033, 1354
BtsIMutI CAGTG 2 cut(s) 703, 1422
Cac8I GCNNGC 5 cut(s) 25, 742, 1008, 1277, 1333
Cfr13I GGNCC 2 cut(s) 566, 615
Csp6I GTAC 7 cut(s) 37, 99, 682, 760, 1378, 1496, 1689
CviQI GTAC 7 cut(s) 37, 99, 682, 760, 1378, 1496, 1689
DdeI CTNAG 6 cut(s) 591, 868, 1059, 1407, 1475, 1713
DpnI GATC 9 cut(s) 195, 249, 263, 471, 931, 1309, 1460, 1551, 1659
DpnII GATC 9 cut(s) 193, 247, 261, 469, 929, 1307, 1458, 1549, 1657
DrdI GACNNNNNNGTC 1 cut(s) 973
DseDI GACNNNNNNGTC 1 cut(s) 973
EaeI YGGCCR 1 cut(s) 319
Eam1104I CTCTTC 4 cut(s) 219, 1082, 1106, 1641
EarI CTCTTC 4 cut(s) 219, 1082, 1106, 1641
EciI GGCGGA 1 cut(s) 42
Eco130I CCWWGG 1 cut(s) 1553
Eco32I GATATC 1 cut(s) 1438
Eco57I CTGAAG 1 cut(s) 503
Eco91I GGTNACC 1 cut(s) 142
EcoO109I RGGNCCY 1 cut(s) 566
EcoO65I GGTNACC 1 cut(s) 142
EcoRII CCWGG 2 cut(s) 489, 1705
EcoRV GATATC 1 cut(s) 1438
EcoT14I CCWWGG 1 cut(s) 1553
EcoT22I ATGCAT 1 cut(s) 1588
ErhI CCWWGG 1 cut(s) 1553
Esp3I CGTCTC 1 cut(s) 589
FaqI GGGAC 4 cut(s) 1304, 1620, 1652, 1723
FbaI TGATCA 1 cut(s) 1458
Fnu4HI GCNGC 3 cut(s) 1280, 1336, 1399
FokI GGATG 4 cut(s) 189, 685, 1020, 1341
Fsp4HI GCNGC 3 cut(s) 1280, 1336, 1399
FspBI CTAG 6 cut(s) 273, 291, 563, 803, 1499, 1632
GluI GCNGC 3 cut(s) 1280, 1336, 1399
GsaI CCCAGC 2 cut(s) 210, 1398
HaeIII GGCC 6 cut(s) 321, 568, 617, 713, 744, 1093
HapII CCGG 5 cut(s) 1147, 1287, 1343, 1358, 1662
HincII GTYRAC 1 cut(s) 47
HindII GTYRAC 1 cut(s) 47
HpaII CCGG 5 cut(s) 1147, 1287, 1343, 1358, 1662
HphI GGTGA 2 cut(s) 136, 1465
Hpy166II GTNNAC 2 cut(s) 47, 1380
Hpy188I TCNGA 7 cut(s) 430, 436, 522, 788, 922, 1429, 1533
Hpy188III TCNNGA 5 cut(s) 123, 502, 803, 898, 1563
Hpy8I GTNNAC 2 cut(s) 47, 1380
Hpy99I CGWCG 1 cut(s) 1308
HpyAV CCTTC 6 cut(s) 82, 527, 1243, 1293, 1444, 1735
HpyCH4III ACNGT 2 cut(s) 376, 1688
HpyCH4IV ACGT 1 cut(s) 598
HpyF10VI GCNNNNNNNGC 2 cut(s) 996, 1090
HpyF3I CTNAG 6 cut(s) 591, 868, 1059, 1407, 1475, 1713
HpySE526I ACGT 1 cut(s) 598
KpnI GGTACC 2 cut(s) 763, 1692
Ksp22I TGATCA 1 cut(s) 1458
Kzo9I GATC 9 cut(s) 193, 247, 261, 469, 929, 1307, 1458, 1549, 1657
LmnI GCTCC 5 cut(s) 310, 356, 996, 1123, 1744
Lsp1109I GCAGC 3 cut(s) 1291, 1322, 1410
LweI GCATC 3 cut(s) 781, 1568, 1573
MaeI CTAG 6 cut(s) 273, 291, 563, 803, 1499, 1632
MaeII ACGT 1 cut(s) 598
MaeIII GTNAC 3 cut(s) 142, 343, 599
MalI GATC 9 cut(s) 195, 249, 263, 471, 931, 1309, 1460, 1551, 1659
MboI GATC 9 cut(s) 193, 247, 261, 469, 929, 1307, 1458, 1549, 1657
MfeI CAATTG 1 cut(s) 978
MflI RGATCY 3 cut(s) 929, 1549, 1657
MhlI GDGCHC 3 cut(s) 542, 732, 1120
MlsI TGGCCA 1 cut(s) 321
MluNI TGGCCA 1 cut(s) 321
MlyI GAGTC 3 cut(s) 1057, 1286, 1313
MmeI TCCRAC 1 cut(s) 853
Mox20I TGGCCA 1 cut(s) 321
Mph1103I ATGCAT 1 cut(s) 1588
MscI TGGCCA 1 cut(s) 321
MseI TTAA 2 cut(s) 692, 1602
Msp20I TGGCCA 1 cut(s) 321
MspI CCGG 5 cut(s) 1147, 1287, 1343, 1358, 1662
MspR9I CCNGG 6 cut(s) 491, 1148, 1288, 1359, 1662, 1707
MunI CAATTG 1 cut(s) 978
Mva1269I GAATGC 1 cut(s) 1338
MvaI CCWGG 2 cut(s) 491, 1707
MwoI GCNNNNNNNGC 2 cut(s) 996, 1090
NciI CCSGG 4 cut(s) 1148, 1288, 1359, 1662
NdeII GATC 9 cut(s) 193, 247, 261, 469, 929, 1307, 1458, 1549, 1657
NlaIV GGNNCC 4 cut(s) 616, 761, 931, 1690
NmeAIII GCCGAG 1 cut(s) 695
NmuCI GTSAC 2 cut(s) 142, 599
NsiI ATGCAT 1 cut(s) 1588
NspI RCATGY 1 cut(s) 550
PciI ACATGT 1 cut(s) 546
PctI GAATGC 1 cut(s) 1338
PfeI GAWTC 8 cut(s) 233, 431, 437, 701, 917, 953, 983, 1528
PflMI CCANNNNNTGG 1 cut(s) 624
PfoI TCCNGGA 1 cut(s) 1146
PkrI GCNGC 3 cut(s) 1281, 1337, 1400
PleI GAGTC 3 cut(s) 1056, 1286, 1313
PpsI GAGTC 3 cut(s) 1056, 1286, 1313
PscI ACATGT 1 cut(s) 546
PsiI TTATAA 2 cut(s) 1160, 1520
Psp6I CCWGG 2 cut(s) 489, 1705
PspEI GGTNACC 1 cut(s) 142
PspFI CCCAGC 2 cut(s) 206, 1394
PspGI CCWGG 2 cut(s) 489, 1705
PspN4I GGNNCC 4 cut(s) 616, 761, 931, 1690
PspPI GGNCC 2 cut(s) 566, 615
PstI CTGCAG 1 cut(s) 1281
PsuI RGATCY 3 cut(s) 929, 1549, 1657
RsaI GTAC 7 cut(s) 38, 100, 683, 761, 1379, 1497, 1690
RsaNI GTAC 7 cut(s) 37, 99, 682, 760, 1378, 1496, 1689
SaqAI TTAA 2 cut(s) 692, 1602
SatI GCNGC 3 cut(s) 1280, 1336, 1399
Sau3AI GATC 9 cut(s) 193, 247, 261, 469, 929, 1307, 1458, 1549, 1657
Sau96I GGNCC 2 cut(s) 566, 615
ScaI AGTACT 1 cut(s) 1497
SchI GAGTC 3 cut(s) 1057, 1286, 1313
ScrFI CCNGG 6 cut(s) 491, 1148, 1288, 1359, 1662, 1707
SduI GDGCHC 3 cut(s) 542, 732, 1120
SfaNI GCATC 3 cut(s) 781, 1568, 1573
SfcI CTRYAG 2 cut(s) 228, 1277
SmlI CTYRAG 2 cut(s) 222, 500
SmoI CTYRAG 2 cut(s) 222, 500
SsiI CCGC 2 cut(s) 27, 1084
SspI AATATT 3 cut(s) 385, 723, 1314
SspMI CTAG 6 cut(s) 273, 291, 563, 803, 1499, 1632
StyD4I CCNGG 6 cut(s) 489, 1146, 1286, 1357, 1660, 1705
StyI CCWWGG 1 cut(s) 1553
TaaI ACNGT 2 cut(s) 376, 1688
TaiI ACGT 1 cut(s) 601
TaqI TCGA 2 cut(s) 451, 1306
TaqII GACCGA 1 cut(s) 618
TatI WGTACW 4 cut(s) 98, 681, 1377, 1495
TfiI GAWTC 8 cut(s) 233, 431, 437, 701, 917, 953, 983, 1528
Tru1I TTAA 2 cut(s) 692, 1602
Tru9I TTAA 2 cut(s) 692, 1602
TscAI CASTG 2 cut(s) 703, 1422
TseFI GTSAC 2 cut(s) 142, 599
TseI GCWGC 3 cut(s) 1279, 1335, 1398
Tsp45I GTSAC 2 cut(s) 142, 599
TspRI CASTG 2 cut(s) 703, 1422
Van91I CCANNNNNTGG 1 cut(s) 624
XapI RAATTY 3 cut(s) 130, 1694, 1764
XbaI TCTAGA 1 cut(s) 802
XceI RCATGY 1 cut(s) 550
XcmI CCANNNNNNNNNTGG 1 cut(s) 869
XspI CTAG 6 cut(s) 273, 291, 563, 803, 1499, 1632
ZrmI AGTACT 1 cut(s) 1497
Zsp2I ATGCAT 1 cut(s) 1588
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.