Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000007

Orthogroup ID

OG0013632

Physical Location & Seq

Genomic Coordinates Reverse (-)

38437437 .. 38446674

Gene Structure 9238 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug07G0346600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2010 bp

ATGGCCGTCGATGATGACTTGTTGGTGAATTCTAAGCCGATGATGGAGGAACCACTGGTCGACTACCGAGTTTATCCGATCCCCGATACAGTCCCAGATGAAAATTTGGAAAGATTTTTTCAGAACGCGAAATCGAAATTAGAAAAGTATGGCACCACAATCACTCTGAATGCGGCTGAGCAAACCCTCACATTCGTACCAGGGGTAAGTAAGTGGAACCCTGGCCCTGCCTTGAACAAATATGGCAAGTTTGAAATCACCACTTTCACTGTGCCCTTCCCCGAAAATCGAGCAACAAAGTTGAAACATGTTTGGCCCGACGTCGAAGAATTCTTATATGAGTTTGCCATTTCATGCAATCTCAATTTGGCTGAGTGTTCCATGCAAGTCTCAACAACCACATTTCTTGATGATCCGTATCTCCTTGACAGAGCTAGACATCTCCTTCAACTGTTGTCCACAAGTCTTGTTCCGCCATATATGGCATTAGAAATATTCCAAGGCAGCAGGCAACATGAAATCATGGAGATAGGAGATCAGCAGGGGGGGCTTTGCACAAAATTTGGGGTCAAGAAGGGGGAATATCTTAAACGATGGGAATGCCTCTTCTACTCCCTAAAGGCACTTTCAAAAGCAACACAATGTCATATCTTTCTTAACGAGAACACTTTTACTGCTGTGACTGCTGTGGAGAATACAGTTGAAAGAATTTCATGGCTCAGGTCAGTCGTGGGAGACTGCATCACCAAAAATTTGTGTCCTGCAACCTCTATCAGGAAGTTTGGAAACGAATTTGGAATGCATCAATCGATGGATGATCTTGAGGATCCACATGCCAAGCACATGGAGATGGTGAGGTCTGCCCCTTTTTTTCTCAGAGATAGCATGCCTGAAGTCTGCTCTCTCTATACGTTACTCCATGAAAAACGAGCAGCAAAGTTGCTAGAAGCTTCGTCAATGCTGGAGTCTTCCCTAAGTAACTATGGCATTTCATGTACTCTGGAGAAGGATTCCATGGCATTCACAACAACGAGATGTACTAAGGAGCCAGATATCATTGACAAGGCTTTGCAGCTACTTGAACTTCTGTCAACAACTCATGTTCCAGTATCTCTGGCAATAGAAATATTGGATGGTAGTATGCAAACTTGCGTAATTAAAATTGGGAATCAAGAAGGTGGGATTTGCTCAGACTTTGGGATCAGTGAGGAGGAATACCTTATACGATGGGAATGTCTTCGCCACTCCCTACAGGTAGTTGCCGAAACGGCGGAATGTAATGTATTTCTCAACTATTACACTGTTGCTGCTGTGGGGAATACTTCACTAGAATTGTTCAAGCAGTCAGTGGAAAACTGCTTTCTTCATAATCTGTGTCCTGGGACTGTTTGCACGGATTATAATTCTGCATCACGAGGGCTGGAAAATATTGAAGATCCACACGTCAAGCACATGGAGATGGAAAAATCGGGGTCGTCGTTGCACATGCTTGAAGTCAGCTCCTTCTGTACATTCTTTTCGCAACTACAAGCAACTCAGTTGTATGATAATTGGTCAATTGTGGAATCGTGTTTACAAAAGCATGACATTTCGTGCAAACTGGTTGCGGCCGAGTTTTACATGACAGTGTCTGTAACCACAAAGGCCGGGGAATCAAATATTAGTGACAAGATTTTGGACGTTCTTAAACTTTTATCAGTTGGTATTCCACCTTCTAAGGCAATACAAGTGCTGGAAGGCAGTATGTACTATGACTTCATCCGGACAGGGTCTCAGTATGGCGGGTTTTGCTTAAAATATGGGATCACTAAGGAGCAATTTGATCAAGTGGTTTGGCCACGAGTTGAACTCGGTTTAGAGGAAATGGCAAGAGTCATGAACTGTTACGTCAGGACTAGTCCAAATGTTATTACTGTCTGCGGTCCGCATGAACAAATAGATGAATTCAGCAAGTTCGTGCAATATTGTTTTGATTCGAGGCGTCAACCGACTTGTGCAATGGGAGTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

669

Amino Acids

75.51

Weight (kDa)

5.09

Isoelectric Point (pI)

49.42

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
KH_KRR1_1st	PF17903	88 - 156	1.1e-11	Krr1 KH1 domain
KH_KRR1_1st	PF17903	500 - 579	7e-07	Krr1 KH1 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013632)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g06761
rosa_chinensis	RchiOBHm_Chr5g0012371
rosa_laevigata	RLG00000031908 RLG00000031909
rosa_roxburghii	Rroxscaffold_1G00064280 Rroxscaffold_1G00064290 Rroxscaffold_3G00218760
rosa_rugosa	Rorug05G0000700 Rorug05G0000700 Rorug07G0346600
rosa_samantha	Rh5AG095000 Rh5AG095100 Rh5BG091300 Rh5BG091400 Rh5CG104300 Rh5DG090800
rosa_wichuraiana	Rw5G008310 Rw7G042340

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1401
AatII	GACGTC	1 cut(s)	324
AccB1I	GGYRCC	1 cut(s)	152
AccI	GTMKAC	1 cut(s)	60
AccII	CGCG	1 cut(s)	128
AccIII	TCCGGA	1 cut(s)	1761
AciI	CCGC	7 cut(s)	173, 473, 1271, 1607, 1782, 1920, 1925
AclWI	GGATC	7 cut(s)	73, 407, 821, 834, 1208, 1430, 1811
AcoI	YGGCCR	3 cut(s)	3, 1608, 1835
AcsI	RAATTY	8 cut(s)	28, 103, 329, 560, 708, 751, 791, 1943
AcuI	CTGAAG	1 cut(s)	912
AcyI	GRCGYC	2 cut(s)	321, 1981
AfaI	GTAC	5 cut(s)	198, 997, 1039, 1510, 1748
AfiI	CCNNNNNNNGG	1 cut(s)	774
AflIII	ACRYGT	2 cut(s)	307, 1441
AhlI	ACTAGT	1 cut(s)	1895
AjiI	CACGTC	1 cut(s)	1444
AjnI	CCWGG	3 cut(s)	199, 220, 1378
AluBI	AGCT	4 cut(s)	434, 950, 1075, 1500
AluI	AGCT	4 cut(s)	434, 950, 1075, 1500
Alw26I	GTCTC	3 cut(s)	394, 729, 1776
AlwI	GGATC	7 cut(s)	73, 407, 821, 834, 1208, 1430, 1811
AlwNI	CAGNNNCTG	1 cut(s)	1631
Aor13HI	TCCGGA	1 cut(s)	1761
AoxI	GGCC	6 cut(s)	3, 223, 314, 1608, 1644, 1835
ApeKI	GCWGC	4 cut(s)	504, 932, 1072, 1307
ApoI	RAATTY	8 cut(s)	28, 103, 329, 560, 708, 751, 791, 1943
Asp700I	GAANNNNTTC	1 cut(s)	1236
AspS9I	GGNCC	3 cut(s)	224, 315, 1922
AsuC2I	CCSGG	1 cut(s)	1648
AsuHPI	GGTGA	4 cut(s)	37, 250, 736, 865
AvaII	GGWCC	1 cut(s)	1922
BaeGI	GKGCMC	1 cut(s)	276
BaeI	ACNNNNGTAYC	2 cut(s)	180, 213
BalI	TGGCCA	1 cut(s)	1837
BamHI	GGATCC	1 cut(s)	826
BanI	GGYRCC	1 cut(s)	152
BarI	GAAGNNNNNNTAC	4 cut(s)	1696, 1728, 1739, 1771
BauI	CACGAG	2 cut(s)	1413, 1839
BbsI	GAAGAC	2 cut(s)	960, 1229
BbvI	GCAGC	4 cut(s)	516, 944, 1084, 1294
BccI	CCATC	7 cut(s)	37, 588, 805, 844, 1127, 1221, 1453
BceAI	ACGGC	1 cut(s)	1284
BcgI	CGANNNNNNTGC	2 cut(s)	582, 616
BciT130I	CCWGG	3 cut(s)	201, 222, 1380
BclI	TGATCA	1 cut(s)	1822
BcnI	CCSGG	1 cut(s)	1648
BcoDI	GTCTC	3 cut(s)	394, 729, 1776
BcuI	ACTAGT	1 cut(s)	1895
BfaI	CTAG	4 cut(s)	435, 944, 1328, 1896
BfmI	CTRYAG	1 cut(s)	1250
BglI	GCCNNNNNGGC	1 cut(s)	1268
BisI	GCNGC	6 cut(s)	174, 505, 933, 1073, 1308, 1608
BlpI	GCTNAGC	1 cut(s)	177
BlsI	GCNGC	6 cut(s)	175, 506, 934, 1074, 1309, 1609
Bme1390I	CCNGG	4 cut(s)	201, 222, 1380, 1648
Bme18I	GGWCC	1 cut(s)	1922
BmgBI	CACGTC	1 cut(s)	1444
BmgT120I	GGNCC	3 cut(s)	224, 315, 1922
BmiI	GGNNCC	5 cut(s)	51, 154, 218, 828, 1047
BmrFI	CCNGG	4 cut(s)	201, 222, 1380, 1648
BmsI	GCATC	3 cut(s)	750, 811, 1418
BpiI	GAAGAC	2 cut(s)	960, 1229
BplI	GAGNNNNNCTC	2 cut(s)	1833, 1865
BpmI	CTGGAG	2 cut(s)	983, 1022
Bpu10I	CCTNAGC	1 cut(s)	719
Bpu1102I	GCTNAGC	1 cut(s)	177
BpuEI	CTTGAG	1 cut(s)	842
BpuMI	CCSGG	1 cut(s)	1648
Bsa29I	ATCGAT	1 cut(s)	809
BsaBI	GATNNNNATC	1 cut(s)	417
BsaHI	GRCGYC	2 cut(s)	321, 1981
BsaI	GGTCTC	1 cut(s)	1776
BsaJI	CCNNGG	6 cut(s)	200, 220, 499, 1014, 1379, 1647
BsaWI	WCCGGW	1 cut(s)	1761
Bsc4I	CCNNNNNNNGG	1 cut(s)	774
Bse1I	ACTGG	3 cut(s)	60, 1106, 1605
Bse3DI	GCAATG	1 cut(s)	2004
Bse8I	GATNNNNATC	1 cut(s)	417
BseAI	TCCGGA	1 cut(s)	1761
BseBI	CCWGG	3 cut(s)	201, 222, 1380
BseCI	ATCGAT	1 cut(s)	809
BseDI	CCNNGG	6 cut(s)	200, 220, 499, 1014, 1379, 1647
BseGI	GGATG	3 cut(s)	820, 1138, 1758
BseJI	GATNNNNATC	1 cut(s)	417
BseLI	CCNNNNNNNGG	1 cut(s)	774
BseMI	GCAATG	1 cut(s)	2004
BseMII	CTCAG	7 cut(s)	168, 363, 733, 889, 1203, 1550, 1787
BseNI	ACTGG	3 cut(s)	60, 1106, 1605
BseRI	GAGGAG	1 cut(s)	1223
BseSI	GKGCMC	1 cut(s)	276
BseX3I	CGGCCG	1 cut(s)	1608
BseXI	GCAGC	4 cut(s)	516, 944, 1084, 1294
Bsh1236I	CGCG	1 cut(s)	128
Bsh1285I	CGRYCG	1 cut(s)	1611
BshFI	GGCC	6 cut(s)	5, 225, 316, 1610, 1646, 1837
BshNI	GGYRCC	1 cut(s)	152
BshVI	ATCGAT	1 cut(s)	809
BsiEI	CGRYCG	1 cut(s)	1611
BsiSI	CCGG	2 cut(s)	1647, 1762
BslFI	GGGAC	2 cut(s)	77, 1396
BslI	CCNNNNNNNGG	1 cut(s)	774
BsmAI	GTCTC	3 cut(s)	394, 729, 1776
BsmFI	GGGAC	2 cut(s)	77, 1396
BsmI	GAATGC	4 cut(s)	175, 605, 804, 1019
BsnI	GGCC	6 cut(s)	5, 225, 316, 1610, 1646, 1837
Bso31I	GGTCTC	1 cut(s)	1776
Bsp1286I	GDGCHC	1 cut(s)	276
Bsp13I	TCCGGA	1 cut(s)	1761
Bsp1407I	TGTACA	1 cut(s)	1508
Bsp143I	GATC	9 cut(s)	78, 412, 535, 817, 826, 1200, 1435, 1803, 1822
Bsp1720I	GCTNAGC	1 cut(s)	177
Bsp19I	CCATGG	1 cut(s)	1014
BspACI	CCGC	7 cut(s)	173, 473, 1271, 1607, 1782, 1920, 1925
BspANI	GGCC	6 cut(s)	5, 225, 316, 1610, 1646, 1837
BspCNI	CTCAG	7 cut(s)	169, 364, 732, 888, 1202, 1549, 1786
BspDI	ATCGAT	1 cut(s)	809
BspEI	TCCGGA	1 cut(s)	1761
BspFNI	CGCG	1 cut(s)	128
BspHI	TCATGA	1 cut(s)	1875
BspLI	GGNNCC	5 cut(s)	51, 154, 218, 828, 1047
BspPI	GGATC	7 cut(s)	73, 407, 821, 834, 1208, 1430, 1811
BspT107I	GGYRCC	1 cut(s)	152
BspTNI	GGTCTC	1 cut(s)	1776
BsrDI	GCAATG	1 cut(s)	2004
BsrGI	TGTACA	1 cut(s)	1508
BsrI	ACTGG	3 cut(s)	60, 1106, 1605
BssECI	CCNNGG	6 cut(s)	200, 220, 499, 1014, 1379, 1647
BssMI	GATC	9 cut(s)	78, 412, 535, 817, 826, 1200, 1435, 1803, 1822
BssNI	GRCGYC	2 cut(s)	321, 1981
BssSI	CACGAG	2 cut(s)	1413, 1839
BssT1I	CCWWGG	2 cut(s)	499, 1014
Bst2BI	CACGAG	2 cut(s)	1413, 1839
Bst2UI	CCWGG	3 cut(s)	201, 222, 1380
Bst4CI	ACNGT	9 cut(s)	91, 271, 453, 700, 1303, 1387, 1627, 1883, 1915
Bst6I	CTCTTC	1 cut(s)	611
BstACI	GRCGYC	2 cut(s)	321, 1981
BstAUI	TGTACA	1 cut(s)	1508
BstC8I	GCNNGC	2 cut(s)	509, 887
BstDSI	CCRYGG	1 cut(s)	1014
BstENI	CCTNNNNNAGG	1 cut(s)	772
BstF5I	GGATG	3 cut(s)	820, 1138, 1758
BstFNI	CGCG	1 cut(s)	128
BstKTI	GATC	9 cut(s)	81, 415, 538, 820, 829, 1203, 1438, 1806, 1825
BstMAI	GTCTC	3 cut(s)	394, 729, 1776
BstMBI	GATC	9 cut(s)	78, 412, 535, 817, 826, 1200, 1435, 1803, 1822
BstMCI	CGRYCG	1 cut(s)	1611
BstMWI	GCNNNNNNNGC	4 cut(s)	547, 683, 1268, 1788
BstNI	CCWGG	3 cut(s)	201, 222, 1380
BstNSI	RCATGY	4 cut(s)	311, 836, 889, 1489
BstSCI	CCNGG	4 cut(s)	199, 220, 1378, 1646
BstSFI	CTRYAG	1 cut(s)	1250
BstSLI	GKGCMC	1 cut(s)	276
BstUI	CGCG	1 cut(s)	128
BstV1I	GCAGC	4 cut(s)	516, 944, 1084, 1294
BstV2I	GAAGAC	2 cut(s)	960, 1229
BstX2I	RGATCY	2 cut(s)	826, 1435
BstXI	CCANNNNNNTGG	1 cut(s)	844
BstYI	RGATCY	2 cut(s)	826, 1435
BstZI	CGGCCG	1 cut(s)	1608
Bsu15I	ATCGAT	1 cut(s)	809
BsuRI	GGCC	6 cut(s)	5, 225, 316, 1610, 1646, 1837
BsuTUI	ATCGAT	1 cut(s)	809
BtgI	CCRYGG	1 cut(s)	1014
BtrI	CACGTC	1 cut(s)	1444
BtsCI	GGATG	3 cut(s)	820, 1138, 1758
BtsIMutI	CAGTG	6 cut(s)	53, 267, 1210, 1299, 1353, 1632
Cac8I	GCNNGC	2 cut(s)	509, 887
CaiI	CAGNNNCTG	1 cut(s)	1631
CciI	TCATGA	1 cut(s)	1875
Cfr13I	GGNCC	3 cut(s)	224, 315, 1922
ClaI	ATCGAT	1 cut(s)	809
CpoI	CGGWCCG	1 cut(s)	1922
CseI	GACGC	1 cut(s)	1970
Csp6I	GTAC	5 cut(s)	197, 996, 1038, 1509, 1747
CspCI	CAANNNNNGTGG	4 cut(s)	388, 423, 448, 483
CspI	CGGWCCG	1 cut(s)	1922
CviQI	GTAC	5 cut(s)	197, 996, 1038, 1509, 1747
DpnI	GATC	9 cut(s)	80, 414, 537, 819, 828, 1202, 1437, 1805, 1824
DpnII	GATC	9 cut(s)	78, 412, 535, 817, 826, 1200, 1435, 1803, 1822
EaeI	YGGCCR	3 cut(s)	3, 1608, 1835
EagI	CGGCCG	1 cut(s)	1608
Eam1104I	CTCTTC	1 cut(s)	611
EarI	CTCTTC	1 cut(s)	611
EciI	GGCGGA	2 cut(s)	462, 1286
EclXI	CGGCCG	1 cut(s)	1608
Eco130I	CCWWGG	2 cut(s)	499, 1014
Eco31I	GGTCTC	1 cut(s)	1776
Eco32I	GATATC	1 cut(s)	1054
Eco47I	GGWCC	1 cut(s)	1922
Eco52I	CGGCCG	1 cut(s)	1608
Eco57I	CTGAAG	1 cut(s)	912
EcoNI	CCTNNNNNAGG	1 cut(s)	772
EcoRI	GAATTC	3 cut(s)	28, 329, 1943
EcoRII	CCWGG	3 cut(s)	199, 220, 1378
EcoRV	GATATC	1 cut(s)	1054
EcoT14I	CCWWGG	2 cut(s)	499, 1014
EcoT22I	ATGCAT	1 cut(s)	804
ErhI	CCWWGG	2 cut(s)	499, 1014
FaqI	GGGAC	2 cut(s)	77, 1396
FauI	CCCGC	1 cut(s)	1775
FbaI	TGATCA	1 cut(s)	1822
FblI	GTMKAC	1 cut(s)	60
Fnu4HI	GCNGC	6 cut(s)	174, 505, 933, 1073, 1308, 1608
FokI	GGATG	3 cut(s)	827, 1145, 1745
Fsp4HI	GCNGC	6 cut(s)	174, 505, 933, 1073, 1308, 1608
FspBI	CTAG	4 cut(s)	435, 944, 1328, 1896
GluI	GCNGC	6 cut(s)	174, 505, 933, 1073, 1308, 1608
GsuI	CTGGAG	2 cut(s)	983, 1022
HaeIII	GGCC	6 cut(s)	5, 225, 316, 1610, 1646, 1837
HapII	CCGG	2 cut(s)	1647, 1762
HgaI	GACGC	1 cut(s)	1970
Hin1I	GRCGYC	2 cut(s)	321, 1981
HincII	GTYRAC	3 cut(s)	61, 1092, 1985
HindII	GTYRAC	3 cut(s)	61, 1092, 1985
HindIII	AAGCTT	1 cut(s)	948
HinfI	GANTC	7 cut(s)	965, 1010, 1168, 1565, 1652, 1872, 1973
HpaII	CCGG	2 cut(s)	1647, 1762
HphI	GGTGA	4 cut(s)	37, 250, 736, 865
Hpy166II	GTNNAC	5 cut(s)	61, 459, 1092, 1574, 1985
Hpy188I	TCNGA	5 cut(s)	78, 123, 168, 878, 1192
Hpy8I	GTNNAC	5 cut(s)	61, 459, 1092, 1574, 1985
Hpy99I	CGWCG	4 cut(s)	11, 323, 326, 1480
HpyAV	CCTTC	8 cut(s)	286, 455, 568, 1000, 1169, 1513, 1722, 1730
HpyCH4III	ACNGT	9 cut(s)	91, 271, 453, 700, 1303, 1387, 1627, 1883, 1915
HpyCH4IV	ACGT	5 cut(s)	321, 911, 1443, 1680, 1887
HpyF10VI	GCNNNNNNNGC	4 cut(s)	547, 683, 1268, 1788
HpySE526I	ACGT	5 cut(s)	321, 911, 1443, 1680, 1887
Hsp92I	GRCGYC	2 cut(s)	321, 1981
Kpn2I	TCCGGA	1 cut(s)	1761
Ksp22I	TGATCA	1 cut(s)	1822
Kzo9I	GATC	9 cut(s)	78, 412, 535, 817, 826, 1200, 1435, 1803, 1822
LmnI	GCTCC	3 cut(s)	1045, 1505, 1813
Lsp1109I	GCAGC	4 cut(s)	516, 944, 1084, 1294
LweI	GCATC	3 cut(s)	750, 811, 1418
MaeI	CTAG	4 cut(s)	435, 944, 1328, 1896
MaeII	ACGT	5 cut(s)	321, 911, 1443, 1680, 1887
MaeIII	GTNAC	6 cut(s)	679, 912, 977, 1633, 1664, 1883
MalI	GATC	9 cut(s)	80, 414, 537, 819, 828, 1202, 1437, 1805, 1824
MboI	GATC	9 cut(s)	78, 412, 535, 817, 826, 1200, 1435, 1803, 1822
MboII	GAAGA	6 cut(s)	338, 598, 960, 1229, 1355, 1445
MfeI	CAATTG	1 cut(s)	1557
MflI	RGATCY	2 cut(s)	826, 1435
MhlI	GDGCHC	1 cut(s)	276
MlsI	TGGCCA	1 cut(s)	1837
MluNI	TGGCCA	1 cut(s)	1837
MlyI	GAGTC	2 cut(s)	974, 1881
Mox20I	TGGCCA	1 cut(s)	1837
Mph1103I	ATGCAT	1 cut(s)	804
MroI	TCCGGA	1 cut(s)	1761
MroXI	GAANNNNTTC	1 cut(s)	1236
MscI	TGGCCA	1 cut(s)	1837
MseI	TTAA	5 cut(s)	588, 657, 1158, 1686, 1793
MslI	CAYNNNNRTG	3 cut(s)	848, 1457, 1625
Msp20I	TGGCCA	1 cut(s)	1837
MspI	CCGG	2 cut(s)	1647, 1762
MspR9I	CCNGG	4 cut(s)	201, 222, 1380, 1648
MunI	CAATTG	1 cut(s)	1557
Mva1269I	GAATGC	4 cut(s)	175, 605, 804, 1019
MvaI	CCWGG	3 cut(s)	201, 222, 1380
MvnI	CGCG	1 cut(s)	128
MwoI	GCNNNNNNNGC	4 cut(s)	547, 683, 1268, 1788
NciI	CCSGG	1 cut(s)	1648
NcoI	CCATGG	1 cut(s)	1014
NdeII	GATC	9 cut(s)	78, 412, 535, 817, 826, 1200, 1435, 1803, 1822
NlaIV	GGNNCC	5 cut(s)	51, 154, 218, 828, 1047
NmeAIII	GCCGAG	1 cut(s)	1636
NmuCI	GTSAC	2 cut(s)	679, 1664
NsiI	ATGCAT	1 cut(s)	804
NspI	RCATGY	4 cut(s)	311, 836, 889, 1489
PaeI	GCATGC	1 cut(s)	889
PagI	TCATGA	1 cut(s)	1875
PciI	ACATGT	1 cut(s)	307
PcsI	WCGNNNNNNNCGW	1 cut(s)	1475
PctI	GAATGC	4 cut(s)	175, 605, 804, 1019
PdmI	GAANNNNTTC	1 cut(s)	1236
PfeI	GAWTC	5 cut(s)	1010, 1168, 1565, 1652, 1973
PflFI	GACNNNGTC	2 cut(s)	1627, 1768
PkrI	GCNGC	6 cut(s)	175, 506, 934, 1074, 1309, 1609
PleI	GAGTC	2 cut(s)	973, 1880
PpsI	GAGTC	2 cut(s)	973, 1880
PscI	ACATGT	1 cut(s)	307
PsiI	TTATAA	1 cut(s)	1401
Psp6I	CCWGG	3 cut(s)	199, 220, 1378
PspGI	CCWGG	3 cut(s)	199, 220, 1378
PspN4I	GGNNCC	5 cut(s)	51, 154, 218, 828, 1047
PspPI	GGNCC	3 cut(s)	224, 315, 1922
PstNI	CAGNNNCTG	1 cut(s)	1631
PsuI	RGATCY	2 cut(s)	826, 1435
PsyI	GACNNNGTC	2 cut(s)	1627, 1768
RsaI	GTAC	5 cut(s)	198, 997, 1039, 1510, 1748
RsaNI	GTAC	5 cut(s)	197, 996, 1038, 1509, 1747
RseI	CAYNNNNRTG	3 cut(s)	848, 1457, 1625
Rsr2I	CGGWCCG	1 cut(s)	1922
RsrII	CGGWCCG	1 cut(s)	1922
SalI	GTCGAC	1 cut(s)	59
SaqAI	TTAA	5 cut(s)	588, 657, 1158, 1686, 1793
SatI	GCNGC	6 cut(s)	174, 505, 933, 1073, 1308, 1608
Sau3AI	GATC	9 cut(s)	78, 412, 535, 817, 826, 1200, 1435, 1803, 1822
Sau96I	GGNCC	3 cut(s)	224, 315, 1922
SchI	GAGTC	2 cut(s)	974, 1881
ScrFI	CCNGG	4 cut(s)	201, 222, 1380, 1648
SduI	GDGCHC	1 cut(s)	276
SfaNI	GCATC	3 cut(s)	750, 811, 1418
SfcI	CTRYAG	1 cut(s)	1250
SinI	GGWCC	1 cut(s)	1922
SmiMI	CAYNNNNRTG	3 cut(s)	848, 1457, 1625
SmlI	CTYRAG	1 cut(s)	821
SmoI	CTYRAG	1 cut(s)	821
SpeI	ACTAGT	1 cut(s)	1895
SphI	GCATGC	1 cut(s)	889
SsiI	CCGC	7 cut(s)	173, 473, 1271, 1607, 1782, 1920, 1925
SspI	AATATT	5 cut(s)	495, 1128, 1429, 1660, 1964
SspMI	CTAG	4 cut(s)	435, 944, 1328, 1896
StyD4I	CCNGG	4 cut(s)	199, 220, 1378, 1646
StyI	CCWWGG	2 cut(s)	499, 1014
TaaI	ACNGT	9 cut(s)	91, 271, 453, 700, 1303, 1387, 1627, 1883, 1915
TaiI	ACGT	5 cut(s)	324, 914, 1446, 1683, 1890
TaqI	TCGA	7 cut(s)	9, 60, 134, 289, 324, 809, 1976
TatI	WGTACW	4 cut(s)	995, 1037, 1508, 1746
TauI	GCSGC	2 cut(s)	176, 1610
TfiI	GAWTC	5 cut(s)	1010, 1168, 1565, 1652, 1973
Tru1I	TTAA	5 cut(s)	588, 657, 1158, 1686, 1793
Tru9I	TTAA	5 cut(s)	588, 657, 1158, 1686, 1793
TscAI	CASTG	6 cut(s)	60, 274, 1210, 1306, 1353, 1632
TseFI	GTSAC	2 cut(s)	679, 1664
TseI	GCWGC	4 cut(s)	504, 932, 1072, 1307
Tsp45I	GTSAC	2 cut(s)	679, 1664
TspGWI	ACGGA	2 cut(s)	405, 1409
TspRI	CASTG	6 cut(s)	60, 274, 1210, 1306, 1353, 1632
Tth111I	GACNNNGTC	2 cut(s)	1627, 1768
VpaK11BI	GGWCC	1 cut(s)	1922
XagI	CCTNNNNNAGG	1 cut(s)	772
XapI	RAATTY	8 cut(s)	28, 103, 329, 560, 708, 751, 791, 1943
XceI	RCATGY	4 cut(s)	311, 836, 889, 1489
XmiI	GTMKAC	1 cut(s)	60
XmnI	GAANNNNTTC	1 cut(s)	1236
XspI	CTAG	4 cut(s)	435, 944, 1328, 1896
ZraI	GACGTC	1 cut(s)	322
Zsp2I	ATGCAT	1 cut(s)	804

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.