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| Species | Orthologous Gene IDs |
|---|---|
| rosa_laevigata | RLG00000003162 RLG00000007080 RLG00000029092 RLG00000032470 RLG00000035964 |
| rosa_multiflora | Rmu_sc0002014.1_g000026 |
| rosa_roxburghii | Rroxscaffold_5G00370940 |
| rosa_samantha | Rh1AG018600 Rh1BG011400 Rh1CG015800 Rh2AG467000 Rh2CG453500 Rh2CG453800 Rh3BG079000 Rh3CG078900 Rh4BG296600 Rh5BG172700 Rh5CG188800 Rh5DG174300 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 45, 152 |
| AclWI | GGATC | 2 cut(s) | 185, 336 |
| AcyI | GRCGYC | 1 cut(s) | 118 |
| Alw21I | GWGCWC | 1 cut(s) | 159 |
| Alw26I | GTCTC | 3 cut(s) | 57, 221, 268 |
| AlwI | GGATC | 2 cut(s) | 185, 336 |
| ApeKI | GCWGC | 3 cut(s) | 47, 83, 251 |
| AspS9I | GGNCC | 1 cut(s) | 341 |
| AsuC2I | CCSGG | 1 cut(s) | 186 |
| AsuHPI | GGTGA | 3 cut(s) | 245, 311, 374 |
| AvaII | GGWCC | 1 cut(s) | 341 |
| Bbv12I | GWGCWC | 1 cut(s) | 159 |
| BbvI | GCAGC | 3 cut(s) | 34, 70, 238 |
| BccI | CCATC | 2 cut(s) | 167, 359 |
| BcnI | CCSGG | 1 cut(s) | 186 |
| BcoDI | GTCTC | 3 cut(s) | 57, 221, 268 |
| BfaI | CTAG | 3 cut(s) | 197, 218, 281 |
| BfmI | CTRYAG | 1 cut(s) | 252 |
| BisI | GCNGC | 3 cut(s) | 48, 84, 252 |
| BlsI | GCNGC | 3 cut(s) | 49, 85, 253 |
| Bme1390I | CCNGG | 1 cut(s) | 186 |
| Bme18I | GGWCC | 1 cut(s) | 341 |
| BmgT120I | GGNCC | 1 cut(s) | 341 |
| BmiI | GGNNCC | 1 cut(s) | 342 |
| BmrFI | CCNGG | 1 cut(s) | 186 |
| BpuMI | CCSGG | 1 cut(s) | 186 |
| BsaBI | GATNNNNATC | 1 cut(s) | 198 |
| BsaHI | GRCGYC | 1 cut(s) | 118 |
| BsaJI | CCNNGG | 1 cut(s) | 163 |
| Bse8I | GATNNNNATC | 1 cut(s) | 198 |
| BseDI | CCNNGG | 1 cut(s) | 163 |
| BseJI | GATNNNNATC | 1 cut(s) | 198 |
| BseMII | CTCAG | 1 cut(s) | 346 |
| BseXI | GCAGC | 3 cut(s) | 34, 70, 238 |
| BsiHKAI | GWGCWC | 1 cut(s) | 159 |
| BsiSI | CCGG | 1 cut(s) | 185 |
| BsmAI | GTCTC | 3 cut(s) | 57, 221, 268 |
| BsmBI | CGTCTC | 1 cut(s) | 57 |
| Bsp1286I | GDGCHC | 1 cut(s) | 159 |
| Bsp143I | GATC | 4 cut(s) | 177, 193, 199, 328 |
| BspACI | CCGC | 2 cut(s) | 45, 152 |
| BspCNI | CTCAG | 1 cut(s) | 345 |
| BspLI | GGNNCC | 1 cut(s) | 342 |
| BspMAI | CTGCAG | 1 cut(s) | 256 |
| BspPI | GGATC | 2 cut(s) | 185, 336 |
| BssECI | CCNNGG | 1 cut(s) | 163 |
| BssMI | GATC | 4 cut(s) | 177, 193, 199, 328 |
| BssNI | GRCGYC | 1 cut(s) | 118 |
| Bst4CI | ACNGT | 3 cut(s) | 241, 299, 355 |
| Bst6I | CTCTTC | 1 cut(s) | 351 |
| BstACI | GRCGYC | 1 cut(s) | 118 |
| BstC8I | GCNNGC | 1 cut(s) | 93 |
| BstDEI | CTNAG | 1 cut(s) | 332 |
| BstKTI | GATC | 4 cut(s) | 180, 196, 202, 331 |
| BstMAI | GTCTC | 3 cut(s) | 57, 221, 268 |
| BstMBI | GATC | 4 cut(s) | 177, 193, 199, 328 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 56, 92 |
| BstSCI | CCNGG | 1 cut(s) | 184 |
| BstSFI | CTRYAG | 1 cut(s) | 252 |
| BstV1I | GCAGC | 3 cut(s) | 34, 70, 238 |
| BstX2I | RGATCY | 1 cut(s) | 328 |
| BstYI | RGATCY | 1 cut(s) | 328 |
| Cac8I | GCNNGC | 1 cut(s) | 93 |
| Cfr13I | GGNCC | 1 cut(s) | 341 |
| CseI | GACGC | 2 cut(s) | 39, 107 |
| CviJI | RGCY | 3 cut(s) | 5, 95, 189 |
| CviKI_1 | RGCY | 3 cut(s) | 5, 95, 189 |
| DdeI | CTNAG | 1 cut(s) | 332 |
| DpnI | GATC | 4 cut(s) | 179, 195, 201, 330 |
| DpnII | GATC | 4 cut(s) | 177, 193, 199, 328 |
| Eam1104I | CTCTTC | 1 cut(s) | 351 |
| EarI | CTCTTC | 1 cut(s) | 351 |
| Eco47I | GGWCC | 1 cut(s) | 341 |
| EcoO109I | RGGNCCY | 1 cut(s) | 341 |
| Esp3I | CGTCTC | 1 cut(s) | 57 |
| FaiI | YATR | 3 cut(s) | 14, 208, 244 |
| Fnu4HI | GCNGC | 3 cut(s) | 48, 84, 252 |
| Fsp4HI | GCNGC | 3 cut(s) | 48, 84, 252 |
| FspBI | CTAG | 3 cut(s) | 197, 218, 281 |
| GluI | GCNGC | 3 cut(s) | 48, 84, 252 |
| HapII | CCGG | 1 cut(s) | 185 |
| HgaI | GACGC | 2 cut(s) | 39, 107 |
| Hin1I | GRCGYC | 1 cut(s) | 118 |
| HpaII | CCGG | 1 cut(s) | 185 |
| HphI | GGTGA | 3 cut(s) | 245, 311, 374 |
| Hpy188III | TCNNGA | 4 cut(s) | 109, 197, 273, 281 |
| Hpy99I | CGWCG | 1 cut(s) | 123 |
| HpyAV | CCTTC | 1 cut(s) | 296 |
| HpyCH4III | ACNGT | 3 cut(s) | 241, 299, 355 |
| HpyCH4V | TGCA | 2 cut(s) | 86, 254 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 56, 92 |
| HpyF3I | CTNAG | 1 cut(s) | 332 |
| Hsp92I | GRCGYC | 1 cut(s) | 118 |
| Kzo9I | GATC | 4 cut(s) | 177, 193, 199, 328 |
| LpnPI | CCDG | 8 cut(s) | 45, 69, 77, 81, 198, 216, 319, 329 |
| Lsp1109I | GCAGC | 3 cut(s) | 34, 70, 238 |
| MaeI | CTAG | 3 cut(s) | 197, 218, 281 |
| MalI | GATC | 4 cut(s) | 179, 195, 201, 330 |
| MboI | GATC | 4 cut(s) | 177, 193, 199, 328 |
| MboII | GAAGA | 3 cut(s) | 128, 131, 338 |
| MflI | RGATCY | 1 cut(s) | 328 |
| MhlI | GDGCHC | 1 cut(s) | 159 |
| MmeI | TCCRAC | 2 cut(s) | 273, 355 |
| MnlI | CCTC | 4 cut(s) | 108, 173, 354, 371 |
| MspA1I | CMGCKG | 1 cut(s) | 47 |
| MspI | CCGG | 1 cut(s) | 185 |
| MspR9I | CCNGG | 1 cut(s) | 186 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 56, 92 |
| NciI | CCSGG | 1 cut(s) | 186 |
| NdeII | GATC | 4 cut(s) | 177, 193, 199, 328 |
| NlaIV | GGNNCC | 1 cut(s) | 342 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 398 |
| PkrI | GCNGC | 3 cut(s) | 49, 85, 253 |
| PpuMI | RGGWCCY | 1 cut(s) | 341 |
| Psp5II | RGGWCCY | 1 cut(s) | 341 |
| PspN4I | GGNNCC | 1 cut(s) | 342 |
| PspPI | GGNCC | 1 cut(s) | 341 |
| PspPPI | RGGWCCY | 1 cut(s) | 341 |
| PstI | CTGCAG | 1 cut(s) | 256 |
| PsuI | RGATCY | 1 cut(s) | 328 |
| SatI | GCNGC | 3 cut(s) | 48, 84, 252 |
| Sau3AI | GATC | 4 cut(s) | 177, 193, 199, 328 |
| Sau96I | GGNCC | 1 cut(s) | 341 |
| ScrFI | CCNGG | 1 cut(s) | 186 |
| SduI | GDGCHC | 1 cut(s) | 159 |
| SetI | ASST | 8 cut(s) | 133, 165, 235, 272, 307, 338, 364, 382 |
| SfcI | CTRYAG | 1 cut(s) | 252 |
| SinI | GGWCC | 1 cut(s) | 341 |
| SsiI | CCGC | 2 cut(s) | 45, 152 |
| SspMI | CTAG | 3 cut(s) | 197, 218, 281 |
| StyD4I | CCNGG | 1 cut(s) | 184 |
| TaaI | ACNGT | 3 cut(s) | 241, 299, 355 |
| TaqI | TCGA | 2 cut(s) | 192, 272 |
| TseI | GCWGC | 3 cut(s) | 47, 83, 251 |
| VpaK11BI | GGWCC | 1 cut(s) | 341 |
| XbaI | TCTAGA | 2 cut(s) | 196, 280 |
| XspI | CTAG | 3 cut(s) | 197, 218, 281 |