Rh1AG472500

Phosphate-induced protein 1 conserved region

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1A
OG0005922
Physical Location & Seq
Forward (+)
68429858 .. 68431265
1408 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1AG472500.1

Sequence Viewer

Length: 1149 bp
ATGGTTTTTCGTGTTGCTGTAGCAACTCAGGCTCTCTTGCTAATCCTCCTCCTCACTACGCCTCACTTCGTATTGGCAGGCAAGAAAGGAGGAGGCGGAGGCAAGAAAGGAGGAGGCGGTAAGGGTGGGGGTAAAAAACCATCGGCACCTTATAGACCACCTAAGCATGGTGGAGGCGGGGCCAAGAATAAACCATCGAAACCAGCAACACCTTATAGACCACCTGTAGTAGGCCAGCCCAAAAAACCAGCGGCACCTTATACACCTCTCCCGGCAGCTGCGGTTACCATGGACCTGCCTAGACCAGGGACACAGCCGGGAGGTCCCGCCTGTAAGGGCAACGGTGAGGGTATCATATACAAGGGAGGCCCTCTCCTGACCGGGGAGCTCAACCTTTCCATCATATTTTACGGCCAATGGCAGAGCCAACACAAGGATCTGATCAGGAGTTTCCTCAGTTCGTTGGCGGTGCCGGGCTCGACGGCGAACCAGTGGTGGGCCATTGTGGAAGGCTACCAGGCTGCGGCCAATAAGCCCAACAAAGGCGTCCATATCAAAGTGGGCACTCAGTCGAGCGATGAAAAGGCCTCCTTGGGCAAAGTTTTGACCAAAGACTTCATCAAGCAGCTTGTGCAAAGGGCCAAGAGCGGCAACCCCAACACTGTCGCTGTCATCTTCGCCCACAAAGATGTCGCAGTTTCAGACCTGTGCAGGGGCAAATGCTACGAGCATGGAGCGTTTGATAACATGCCCTATGTCATTGTCGGAAACCCCGAAATCGAGTGCCCCGGTTCTTGTGCCATTCCCTTCGCAAAGGCCAGCTACGGTCCTGCAGGCGACACCGTCAAACCACCAAACGGCGACCTTGGCGTTGATGCTACCATCGTCAACTTCGCCTCCGGCTTGGCTTCAGTAGTCACTAACCCATTCAACGGCGGATTTTCCAAACCAGGACCCAAAACCTGGGCGATTGAGGCTGGCAACGCCTGCGAGGATATGTTCGGAAGCGGCGCAGGCCCCGGCCGACCCGGAAAGATGACAATTGACGCAGCCGGTTGTGGCTACAATGCCGTTGGAGAAGGGGGTGCCAGATTCTTGCTTCCAGCAATTTGGGATCCAAAGTCGTCCACATGCTGGACCCCTATGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Phi_1

Protein Analysis

382

Amino Acids

39.37

Weight (kDa)

9.54

Isoelectric Point (pI)

31.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Phi_1 PF04674 120 - 381 2.2e-83 Phosphate-induced protein 1 conserved region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 303
AccB1I GGYRCC 4 cut(s) 145, 253, 469, 1085
AccB7I CCANNNNNTGG 2 cut(s) 963, 1134
AccBSI CCGCTC 1 cut(s) 648
AclWI GGATC 3 cut(s) 444, 1109, 1122
AcoI YGGCCR 3 cut(s) 412, 525, 1021
AcuI CTGAAG 1 cut(s) 894
AcyI GRCGYC 1 cut(s) 546
AgsI TTSAA 1 cut(s) 931
AjnI CCWGG 4 cut(s) 304, 516, 949, 962
AluBI AGCT 4 cut(s) 278, 388, 628, 822
AluI AGCT 4 cut(s) 278, 388, 628, 822
Alw21I GWGCWC 1 cut(s) 390
AlwI GGATC 3 cut(s) 444, 1109, 1122
ApeKI GCWGC 5 cut(s) 275, 278, 521, 625, 1049
AspLEI GCGC 1 cut(s) 1013
AsuC2I CCSGG 7 cut(s) 272, 318, 382, 474, 789, 1020, 1029
AsuHPI GGTGA 1 cut(s) 356
AvaII GGWCC 5 cut(s) 292, 323, 827, 953, 1137
BaeGI GKGCMC 2 cut(s) 566, 788
BamHI GGATCC 1 cut(s) 1114
BanI GGYRCC 4 cut(s) 145, 253, 469, 1085
BanII GRGCYC 2 cut(s) 390, 479
Bbv12I GWGCWC 1 cut(s) 390
BbvI GCAGC 5 cut(s) 265, 287, 508, 637, 1061
BccI CCATC 4 cut(s) 148, 202, 407, 890
BceAI ACGGC 5 cut(s) 427, 498, 874, 949, 1055
BciT130I CCWGG 4 cut(s) 306, 518, 951, 964
BclI TGATCA 1 cut(s) 441
BcnI CCSGG 7 cut(s) 272, 318, 382, 474, 789, 1020, 1029
BfaI CTAG 1 cut(s) 300
BfmI CTRYAG 3 cut(s) 18, 225, 831
BfuAI ACCTGC 1 cut(s) 303
BisI GCNGC 9 cut(s) 252, 276, 279, 522, 525, 626, 649, 1009, 1050
BlsI GCNGC 9 cut(s) 253, 277, 280, 523, 526, 627, 650, 1010, 1051
Bme18I GGWCC 5 cut(s) 292, 323, 827, 953, 1137
BmsI GCATC 1 cut(s) 865
BplI GAGNNNNNCTC 2 cut(s) 357, 389
Bpu10I CCTNAGC 1 cut(s) 162
BpuMI CCSGG 7 cut(s) 272, 318, 382, 474, 789, 1020, 1029
BsaHI GRCGYC 1 cut(s) 546
BsaJI CCNNGG 8 cut(s) 288, 305, 381, 591, 787, 865, 963, 1018
BsaXI ACNNNNNCTCC 2 cut(s) 881, 911
Bse118I RCCGGY 1 cut(s) 1052
Bse1I ACTGG 1 cut(s) 490
BseBI CCWGG 4 cut(s) 306, 518, 951, 964
BseDI CCNNGG 8 cut(s) 288, 305, 381, 591, 787, 865, 963, 1018
BseMII CTCAG 3 cut(s) 41, 469, 581
BseNI ACTGG 1 cut(s) 490
BseRI GAGGAG 4 cut(s) 38, 41, 105, 126
BseSI GKGCMC 2 cut(s) 566, 788
BseX3I CGGCCG 1 cut(s) 1021
BseXI GCAGC 5 cut(s) 265, 287, 508, 637, 1061
BsgI GTGCAG 1 cut(s) 730
Bsh1285I CGRYCG 1 cut(s) 1024
BshNI GGYRCC 4 cut(s) 145, 253, 469, 1085
BsiEI CGRYCG 1 cut(s) 1024
BsiHKAI GWGCWC 1 cut(s) 390
BsiSI CCGG 9 cut(s) 272, 317, 381, 473, 789, 900, 1020, 1029, 1053
BslFI GGGAC 2 cut(s) 309, 322
BsmFI GGGAC 2 cut(s) 309, 322
Bsp1286I GDGCHC 4 cut(s) 390, 479, 566, 788
Bsp143I GATC 3 cut(s) 436, 441, 1114
Bsp19I CCATGG 1 cut(s) 288
BspCNI CTCAG 3 cut(s) 40, 468, 580
BspMAI CTGCAG 1 cut(s) 835
BspMI ACCTGC 1 cut(s) 303
BspPI GGATC 3 cut(s) 444, 1109, 1122
BspT107I GGYRCC 4 cut(s) 145, 253, 469, 1085
BsrBI CCGCTC 1 cut(s) 648
BsrFI RCCGGY 1 cut(s) 1052
BsrI ACTGG 1 cut(s) 490
BssAI RCCGGY 1 cut(s) 1052
BssECI CCNNGG 8 cut(s) 288, 305, 381, 591, 787, 865, 963, 1018
BssMI GATC 3 cut(s) 436, 441, 1114
BssNI GRCGYC 1 cut(s) 546
BssT1I CCWWGG 3 cut(s) 288, 591, 865
Bst2UI CCWGG 4 cut(s) 306, 518, 951, 964
Bst4CI ACNGT 4 cut(s) 344, 664, 827, 844
BstACI GRCGYC 1 cut(s) 546
BstAPI GCANNNNNTGC 2 cut(s) 631, 987
BstC8I GCNNGC 7 cut(s) 79, 236, 820, 835, 979, 988, 1015
BstDEI CTNAG 4 cut(s) 27, 162, 455, 567
BstDSI CCRYGG 1 cut(s) 288
BstEII GGTNACC 1 cut(s) 283
BstENI CCTNNNNNAGG 2 cut(s) 228, 303
BstHHI GCGC 1 cut(s) 1013
BstKTI GATC 3 cut(s) 439, 444, 1117
BstMBI GATC 3 cut(s) 436, 441, 1114
BstMCI CGRYCG 1 cut(s) 1024
BstMWI GCNNNNNNNGC 7 cut(s) 29, 631, 867, 974, 983, 987, 1014
BstNI CCWGG 4 cut(s) 306, 518, 951, 964
BstNSI RCATGY 2 cut(s) 751, 1134
BstPI GGTNACC 1 cut(s) 283
BstSFI CTRYAG 3 cut(s) 18, 225, 831
BstSLI GKGCMC 2 cut(s) 566, 788
BstV1I GCAGC 5 cut(s) 265, 287, 508, 637, 1061
BstX2I RGATCY 2 cut(s) 436, 1114
BstXI CCANNNNNNTGG 1 cut(s) 1110
BstYI RGATCY 2 cut(s) 436, 1114
BstZI CGGCCG 1 cut(s) 1021
BtgI CCRYGG 1 cut(s) 288
BtgZI GCGATG 1 cut(s) 591
BtsIMutI CAGTG 2 cut(s) 497, 660
BveI ACCTGC 1 cut(s) 303
Cac8I GCNNGC 7 cut(s) 79, 236, 820, 835, 979, 988, 1015
CfoI GCGC 1 cut(s) 1013
Cfr10I RCCGGY 1 cut(s) 1052
CseI GACGC 2 cut(s) 535, 1055
CviAII CATG 5 cut(s) 167, 289, 731, 748, 1131
DdeI CTNAG 4 cut(s) 27, 162, 455, 567
DpnI GATC 3 cut(s) 438, 443, 1116
DpnII GATC 3 cut(s) 436, 441, 1114
EaeI YGGCCR 3 cut(s) 412, 525, 1021
EagI CGGCCG 1 cut(s) 1021
EciI GGCGGA 2 cut(s) 111, 951
Ecl136II GAGCTC 1 cut(s) 388
EclXI CGGCCG 1 cut(s) 1021
Eco130I CCWWGG 3 cut(s) 288, 591, 865
Eco147I AGGCCT 1 cut(s) 587
Eco24I GRGCYC 2 cut(s) 390, 479
Eco47I GGWCC 5 cut(s) 292, 323, 827, 953, 1137
Eco52I CGGCCG 1 cut(s) 1021
Eco53kI GAGCTC 1 cut(s) 388
Eco57I CTGAAG 1 cut(s) 894
Eco91I GGTNACC 1 cut(s) 283
EcoICRI GAGCTC 1 cut(s) 388
EcoNI CCTNNNNNAGG 2 cut(s) 228, 303
EcoO109I RGGNCCY 4 cut(s) 323, 368, 953, 1016
EcoO65I GGTNACC 1 cut(s) 283
EcoRII CCWGG 4 cut(s) 304, 516, 949, 962
EcoT14I CCWWGG 3 cut(s) 288, 591, 865
EcoT38I GRGCYC 2 cut(s) 390, 479
ErhI CCWWGG 3 cut(s) 288, 591, 865
FaeI CATG 5 cut(s) 170, 292, 734, 751, 1134
FalI AAGNNNNNCTT 2 cut(s) 575, 607
FaqI GGGAC 2 cut(s) 309, 322
FatI CATG 5 cut(s) 166, 288, 730, 747, 1130
FauI CCCGC 2 cut(s) 170, 334
FbaI TGATCA 1 cut(s) 441
Fnu4HI GCNGC 9 cut(s) 252, 276, 279, 522, 525, 626, 649, 1009, 1050
FriOI GRGCYC 2 cut(s) 390, 479
Fsp4HI GCNGC 9 cut(s) 252, 276, 279, 522, 525, 626, 649, 1009, 1050
FspBI CTAG 1 cut(s) 300
GlaI GCGC 1 cut(s) 1012
GluI GCNGC 9 cut(s) 252, 276, 279, 522, 525, 626, 649, 1009, 1050
HapII CCGG 9 cut(s) 272, 317, 381, 473, 789, 900, 1020, 1029, 1053
HgaI GACGC 2 cut(s) 535, 1055
HhaI GCGC 1 cut(s) 1013
Hin1I GRCGYC 1 cut(s) 546
Hin1II CATG 5 cut(s) 170, 292, 734, 751, 1134
Hin6I GCGC 1 cut(s) 1011
HinP1I GCGC 1 cut(s) 1011
HincII GTYRAC 1 cut(s) 889
HindII GTYRAC 1 cut(s) 889
HinfI GANTC 1 cut(s) 1092
HpaII CCGG 9 cut(s) 272, 317, 381, 473, 789, 900, 1020, 1029, 1053
HphI GGTGA 1 cut(s) 356
Hpy166II GTNNAC 2 cut(s) 889, 1128
Hpy188I TCNGA 4 cut(s) 441, 703, 767, 1004
Hpy188III TCNNGA 2 cut(s) 376, 445
Hpy8I GTNNAC 2 cut(s) 889, 1128
Hpy99I CGWCG 1 cut(s) 484
HpyAV CCTTC 3 cut(s) 503, 817, 1073
HpyCH4III ACNGT 4 cut(s) 344, 664, 827, 844
HpyCH4V TGCA 3 cut(s) 634, 711, 833
HpyF10VI GCNNNNNNNGC 7 cut(s) 29, 631, 867, 974, 983, 987, 1014
HpyF3I CTNAG 4 cut(s) 27, 162, 455, 567
Hsp92I GRCGYC 1 cut(s) 546
Hsp92II CATG 5 cut(s) 170, 292, 734, 751, 1134
HspAI GCGC 1 cut(s) 1011
Ksp22I TGATCA 1 cut(s) 441
Kzo9I GATC 3 cut(s) 436, 441, 1114
LmnI GCTCC 2 cut(s) 385, 734
Lsp1109I GCAGC 5 cut(s) 265, 287, 508, 637, 1061
LweI GCATC 1 cut(s) 865
MaeI CTAG 1 cut(s) 300
MaeIII GTNAC 2 cut(s) 283, 916
MalI GATC 3 cut(s) 438, 443, 1116
MbiI CCGCTC 1 cut(s) 648
MboI GATC 3 cut(s) 436, 441, 1114
MboII GAAGA 1 cut(s) 667
MfeI CAATTG 1 cut(s) 1041
MflI RGATCY 2 cut(s) 436, 1114
MhlI GDGCHC 4 cut(s) 390, 479, 566, 788
MluCI AATT 2 cut(s) 1041, 1107
MmeI TCCRAC 2 cut(s) 745, 1054
MslI CAYNNNNRTG 1 cut(s) 687
MspA1I CMGCKG 2 cut(s) 251, 278
MspI CCGG 9 cut(s) 272, 317, 381, 473, 789, 900, 1020, 1029, 1053
MunI CAATTG 1 cut(s) 1041
MvaI CCWGG 4 cut(s) 306, 518, 951, 964
MwoI GCNNNNNNNGC 7 cut(s) 29, 631, 867, 974, 983, 987, 1014
NciI CCSGG 7 cut(s) 272, 318, 382, 474, 789, 1020, 1029
NcoI CCATGG 1 cut(s) 288
NdeII GATC 3 cut(s) 436, 441, 1114
NlaIII CATG 5 cut(s) 170, 292, 734, 751, 1134
NmuCI GTSAC 1 cut(s) 916
NspI RCATGY 2 cut(s) 751, 1134
PceI AGGCCT 1 cut(s) 587
PcsI WCGNNNNNNNCGW 1 cut(s) 771
PfeI GAWTC 1 cut(s) 1092
PflFI GACNNNGTC 1 cut(s) 842
PflMI CCANNNNNTGG 2 cut(s) 963, 1134
PkrI GCNGC 9 cut(s) 253, 277, 280, 523, 526, 627, 650, 1010, 1051
PpuMI RGGWCCY 2 cut(s) 323, 953
Psp124BI GAGCTC 1 cut(s) 390
Psp5II RGGWCCY 2 cut(s) 323, 953
Psp6I CCWGG 4 cut(s) 304, 516, 949, 962
PspEI GGTNACC 1 cut(s) 283
PspGI CCWGG 4 cut(s) 304, 516, 949, 962
PspPPI RGGWCCY 2 cut(s) 323, 953
PstI CTGCAG 1 cut(s) 835
PsuI RGATCY 2 cut(s) 436, 1114
PsyI GACNNNGTC 1 cut(s) 842
PvuII CAGCTG 1 cut(s) 278
RseI CAYNNNNRTG 1 cut(s) 687
SacI GAGCTC 1 cut(s) 390
SatI GCNGC 9 cut(s) 252, 276, 279, 522, 525, 626, 649, 1009, 1050
Sau3AI GATC 3 cut(s) 436, 441, 1114
SbfI CCTGCAGG 1 cut(s) 835
SdaI CCTGCAGG 1 cut(s) 835
SduI GDGCHC 4 cut(s) 390, 479, 566, 788
SfaNI GCATC 1 cut(s) 865
SfcI CTRYAG 3 cut(s) 18, 225, 831
SinI GGWCC 5 cut(s) 292, 323, 827, 953, 1137
SmiMI CAYNNNNRTG 1 cut(s) 687
Sse8387I CCTGCAGG 1 cut(s) 835
Sse9I AATT 2 cut(s) 1041, 1107
SseBI AGGCCT 1 cut(s) 587
SspMI CTAG 1 cut(s) 300
SstI GAGCTC 1 cut(s) 390
StuI AGGCCT 1 cut(s) 587
StyI CCWWGG 3 cut(s) 288, 591, 865
TaaI ACNGT 4 cut(s) 344, 664, 827, 844
TaqI TCGA 4 cut(s) 197, 479, 572, 780
TasI AATT 2 cut(s) 1041, 1107
TauI GCSGC 4 cut(s) 254, 527, 651, 1011
TfiI GAWTC 1 cut(s) 1092
TscAI CASTG 2 cut(s) 497, 667
TseFI GTSAC 1 cut(s) 916
TseI GCWGC 5 cut(s) 275, 278, 521, 625, 1049
Tsp45I GTSAC 1 cut(s) 916
TspDTI ATGAA 2 cut(s) 594, 607
TspRI CASTG 2 cut(s) 497, 667
Tth111I GACNNNGTC 1 cut(s) 842
Van91I CCANNNNNTGG 2 cut(s) 963, 1134
VpaK11BI GGWCC 5 cut(s) 292, 323, 827, 953, 1137
XagI CCTNNNNNAGG 2 cut(s) 228, 303
XceI RCATGY 2 cut(s) 751, 1134
XspI CTAG 1 cut(s) 300
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.