Rh1CG443300

Phosphate-induced protein 1 conserved region

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1C
OG0005922
Physical Location & Seq
Forward (+)
69575545 .. 69577265
1721 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1CG443300.1

Sequence Viewer

Length: 1158 bp
ATGGTTTTTCGTGTTGCAGTAGCAACTCAGGCTCTCTTGCTAATCCTCCTCCTCACTACGCCTCACTTCGTATTGGCAGGCAAGAAAGGAGGAAACGGAGGCAAGAAAGGAGGAGGCGGTAAGGGTGGGGCTAAAAAACCATCGGCACCTTATAGAGCACCTAAGAATGGTGGAGGCGGGGCCAAGAATAAACCATCGAAACCATCGAAACCAGCAACACCTTATAGACCACCTGTAGTAGCCGCGCCCAAAAAACCAGTGGCAGCTTATACACCTCTGCCGGAAGCTGTGGCCACCATTGAAGTGCCTAGACCAGGGACACTATCGAGAGGTCCCGCCTGTAAGGGCAACGGTGAGGGTATCATATACAAGGGAGGCCCTCTCCTGACCGGGGAGCTCAACCTTTCCATCATATTTTACGGCCAATGGCAGAGCCAACACAAGGATCTGATCAGGAGTTTCCTCAGTTCGTTGGCGGTGCCGGGCTCGACGGCGAACCAGTGGTGGGCCATTGTGGAAAGTTACCAGACTGTGGCCAATATGCCCAACCAAGGCGTCCATATCAAAGTGGGCACTCAGTCGAGCGATGACAAGGCCTCCTTGGGCAAAGTTTTGACCAAAGACTTTATCAAGCAGCTTGTGCAGAGGGCCAAGAGCGGCAACCCCAACACTCTCGCTGTCATCTTCGCCCACAAAGATGTCGCAGTTGCAGACCTGTGCAGGGGCAAATGCTACGAGCATGGAGCGTTTGATAACATGCCCTATCTCATTGTCGGAAACCCCGAAGTTGAGTGCCCTGGTTCTTGTGCCATTCCCTTCGCAAAGGCCAGCTACGGTCCTGCAGGCGACACCGTCAAACCACCAAACGGCGACCTTGGCGTTGATGCTACCATCATCAACTTTGCCTCCGGCTTGGCTTCAGTAGTCACTAACCCATTCAACGGCGGATTTTCCAAACCAGGACCCAAAACCTGGGCGATTGAGGCTGGCAACGCCTGCGAGGATATGTTCGGAAGCGGAGCAGGCCCCGGCCAACCCGGAAAGATGACAATCGACGCAGCCGGTTGTGGCTACAATGCCGTTGGAGATGGGGGTGCCAGATTCTTGCTTCCAGCAATTTGGGATCCAAAGTCGTCCACATGCTGGACCCCTATGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Phi_1

Protein Analysis

385

Amino Acids

39.82

Weight (kDa)

9.45

Isoelectric Point (pI)

28.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Phi_1 PF04674 123 - 384 1e-82 Phosphate-induced protein 1 conserved region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 3 cut(s) 145, 478, 1094
AccB7I CCANNNNNTGG 3 cut(s) 532, 972, 1143
AccBSI CCGCTC 1 cut(s) 657
AccII CGCG 1 cut(s) 245
AciI CCGC 8 cut(s) 117, 177, 243, 336, 476, 657, 945, 1017
AclWI GGATC 3 cut(s) 453, 1118, 1131
AcoI YGGCCR 4 cut(s) 291, 421, 534, 1030
AcuI CTGAAG 1 cut(s) 903
AcyI GRCGYC 1 cut(s) 555
AgsI TTSAA 2 cut(s) 302, 940
AjnI CCWGG 4 cut(s) 313, 796, 958, 971
AluBI AGCT 5 cut(s) 266, 287, 397, 637, 831
AluI AGCT 5 cut(s) 266, 287, 397, 637, 831
Alw21I GWGCWC 2 cut(s) 160, 399
AlwI GGATC 3 cut(s) 453, 1118, 1131
ApeKI GCWGC 3 cut(s) 263, 634, 1058
AspLEI GCGC 1 cut(s) 247
AspS9I GGNCC 9 cut(s) 180, 332, 377, 507, 648, 836, 962, 1025, 1146
AsuC2I CCSGG 4 cut(s) 391, 483, 1029, 1038
AsuHPI GGTGA 1 cut(s) 365
AvaII GGWCC 4 cut(s) 332, 836, 962, 1146
BaeGI GKGCMC 2 cut(s) 575, 797
BalI TGGCCA 2 cut(s) 293, 536
BamHI GGATCC 1 cut(s) 1123
BanI GGYRCC 3 cut(s) 145, 478, 1094
BanII GRGCYC 2 cut(s) 399, 488
Bbv12I GWGCWC 2 cut(s) 160, 399
BbvI GCAGC 3 cut(s) 275, 646, 1070
BccI CCATC 6 cut(s) 148, 202, 211, 416, 899, 1082
BceAI ACGGC 5 cut(s) 436, 507, 883, 958, 1064
BciT130I CCWGG 4 cut(s) 315, 798, 960, 973
BclI TGATCA 1 cut(s) 450
BcnI CCSGG 4 cut(s) 391, 483, 1029, 1038
BfaI CTAG 1 cut(s) 309
BfmI CTRYAG 2 cut(s) 234, 840
BisI GCNGC 5 cut(s) 243, 264, 635, 658, 1059
BlsI GCNGC 5 cut(s) 244, 265, 636, 659, 1060
Bme1390I CCNGG 8 cut(s) 315, 391, 483, 798, 960, 973, 1029, 1038
Bme18I GGWCC 4 cut(s) 332, 836, 962, 1146
BmgT120I GGNCC 9 cut(s) 180, 332, 377, 507, 648, 836, 962, 1025, 1146
BmiI GGNNCC 9 cut(s) 147, 181, 334, 480, 964, 1027, 1096, 1125, 1148
BmrFI CCNGG 8 cut(s) 315, 391, 483, 798, 960, 973, 1029, 1038
BmsI GCATC 1 cut(s) 874
BplI GAGNNNNNCTC 2 cut(s) 366, 398
BpuMI CCSGG 4 cut(s) 391, 483, 1029, 1038
BsaBI GATNNNNATC 1 cut(s) 1049
BsaHI GRCGYC 1 cut(s) 555
BsaJI CCNNGG 8 cut(s) 314, 390, 550, 600, 796, 874, 972, 1027
BsaXI ACNNNNNCTCC 4 cut(s) 581, 611, 890, 920
Bse118I RCCGGY 1 cut(s) 1061
Bse1I ACTGG 2 cut(s) 257, 499
Bse8I GATNNNNATC 1 cut(s) 1049
BseBI CCWGG 4 cut(s) 315, 798, 960, 973
BseDI CCNNGG 8 cut(s) 314, 390, 550, 600, 796, 874, 972, 1027
BseJI GATNNNNATC 1 cut(s) 1049
BseMII CTCAG 3 cut(s) 41, 478, 590
BseNI ACTGG 2 cut(s) 257, 499
BseRI GAGGAG 3 cut(s) 38, 41, 126
BseSI GKGCMC 2 cut(s) 575, 797
BseXI GCAGC 3 cut(s) 275, 646, 1070
BsgI GTGCAG 2 cut(s) 662, 739
Bsh1236I CGCG 1 cut(s) 245
BshNI GGYRCC 3 cut(s) 145, 478, 1094
BsiHKAI GWGCWC 2 cut(s) 160, 399
BsiSI CCGG 7 cut(s) 281, 390, 482, 909, 1029, 1038, 1062
BslFI GGGAC 2 cut(s) 318, 331
BsmFI GGGAC 2 cut(s) 318, 331
Bsp1286I GDGCHC 5 cut(s) 160, 399, 488, 575, 797
Bsp143I GATC 3 cut(s) 445, 450, 1123
BspACI CCGC 8 cut(s) 117, 177, 243, 336, 476, 657, 945, 1017
BspCNI CTCAG 3 cut(s) 40, 477, 589
BspFNI CGCG 1 cut(s) 245
BspLI GGNNCC 9 cut(s) 147, 181, 334, 480, 964, 1027, 1096, 1125, 1148
BspMAI CTGCAG 1 cut(s) 844
BspPI GGATC 3 cut(s) 453, 1118, 1131
BspT107I GGYRCC 3 cut(s) 145, 478, 1094
BsrBI CCGCTC 1 cut(s) 657
BsrFI RCCGGY 1 cut(s) 1061
BsrI ACTGG 2 cut(s) 257, 499
BssAI RCCGGY 1 cut(s) 1061
BssECI CCNNGG 8 cut(s) 314, 390, 550, 600, 796, 874, 972, 1027
BssMI GATC 3 cut(s) 445, 450, 1123
BssNI GRCGYC 1 cut(s) 555
BssT1I CCWWGG 3 cut(s) 550, 600, 874
Bst2UI CCWGG 4 cut(s) 315, 798, 960, 973
Bst4CI ACNGT 4 cut(s) 353, 532, 836, 853
BstACI GRCGYC 1 cut(s) 555
BstAPI GCANNNNNTGC 2 cut(s) 640, 996
BstC8I GCNNGC 6 cut(s) 79, 829, 844, 988, 997, 1024
BstDEI CTNAG 4 cut(s) 27, 162, 464, 576
BstENI CCTNNNNNAGG 1 cut(s) 312
BstFNI CGCG 1 cut(s) 245
BstHHI GCGC 1 cut(s) 247
BstKTI GATC 3 cut(s) 448, 453, 1126
BstMBI GATC 3 cut(s) 445, 450, 1123
BstMWI GCNNNNNNNGC 7 cut(s) 29, 640, 876, 983, 992, 996, 1023
BstNI CCWGG 4 cut(s) 315, 798, 960, 973
BstNSI RCATGY 2 cut(s) 760, 1143
BstSCI CCNGG 8 cut(s) 313, 389, 481, 796, 958, 971, 1027, 1036
BstSFI CTRYAG 2 cut(s) 234, 840
BstSLI GKGCMC 2 cut(s) 575, 797
BstUI CGCG 1 cut(s) 245
BstV1I GCAGC 3 cut(s) 275, 646, 1070
BstX2I RGATCY 2 cut(s) 445, 1123
BstXI CCANNNNNNTGG 1 cut(s) 1119
BstYI RGATCY 2 cut(s) 445, 1123
BtgZI GCGATG 1 cut(s) 600
BtsIMutI CAGTG 2 cut(s) 264, 506
Cac8I GCNNGC 6 cut(s) 79, 829, 844, 988, 997, 1024
CfoI GCGC 1 cut(s) 247
Cfr10I RCCGGY 1 cut(s) 1061
Cfr13I GGNCC 9 cut(s) 180, 332, 377, 507, 648, 836, 962, 1025, 1146
CseI GACGC 2 cut(s) 544, 1064
CviAII CATG 3 cut(s) 740, 757, 1140
DdeI CTNAG 4 cut(s) 27, 162, 464, 576
DpnI GATC 3 cut(s) 447, 452, 1125
DpnII GATC 3 cut(s) 445, 450, 1123
EaeI YGGCCR 4 cut(s) 291, 421, 534, 1030
EciI GGCGGA 1 cut(s) 960
Ecl136II GAGCTC 1 cut(s) 397
Eco130I CCWWGG 3 cut(s) 550, 600, 874
Eco147I AGGCCT 1 cut(s) 596
Eco24I GRGCYC 2 cut(s) 399, 488
Eco47I GGWCC 4 cut(s) 332, 836, 962, 1146
Eco53kI GAGCTC 1 cut(s) 397
Eco57I CTGAAG 1 cut(s) 903
EcoICRI GAGCTC 1 cut(s) 397
EcoNI CCTNNNNNAGG 1 cut(s) 312
EcoO109I RGGNCCY 4 cut(s) 332, 377, 962, 1025
EcoRII CCWGG 4 cut(s) 313, 796, 958, 971
EcoT14I CCWWGG 3 cut(s) 550, 600, 874
EcoT38I GRGCYC 2 cut(s) 399, 488
ErhI CCWWGG 3 cut(s) 550, 600, 874
FaeI CATG 3 cut(s) 743, 760, 1143
FalI AAGNNNNNCTT 2 cut(s) 584, 616
FaqI GGGAC 2 cut(s) 318, 331
FatI CATG 3 cut(s) 739, 756, 1139
FauI CCCGC 2 cut(s) 170, 343
FbaI TGATCA 1 cut(s) 450
Fnu4HI GCNGC 5 cut(s) 243, 264, 635, 658, 1059
FriOI GRGCYC 2 cut(s) 399, 488
Fsp4HI GCNGC 5 cut(s) 243, 264, 635, 658, 1059
FspBI CTAG 1 cut(s) 309
GlaI GCGC 1 cut(s) 246
GluI GCNGC 5 cut(s) 243, 264, 635, 658, 1059
HapII CCGG 7 cut(s) 281, 390, 482, 909, 1029, 1038, 1062
HgaI GACGC 2 cut(s) 544, 1064
HhaI GCGC 1 cut(s) 247
Hin1I GRCGYC 1 cut(s) 555
Hin1II CATG 3 cut(s) 743, 760, 1143
Hin6I GCGC 1 cut(s) 245
HinP1I GCGC 1 cut(s) 245
HinfI GANTC 1 cut(s) 1101
HpaII CCGG 7 cut(s) 281, 390, 482, 909, 1029, 1038, 1062
HphI GGTGA 1 cut(s) 365
Hpy166II GTNNAC 1 cut(s) 1137
Hpy188I TCNGA 3 cut(s) 450, 776, 1013
Hpy188III TCNNGA 3 cut(s) 327, 385, 454
Hpy8I GTNNAC 1 cut(s) 1137
Hpy99I CGWCG 2 cut(s) 493, 1058
HpyAV CCTTC 1 cut(s) 826
HpyCH4III ACNGT 4 cut(s) 353, 532, 836, 853
HpyCH4V TGCA 5 cut(s) 17, 643, 710, 720, 842
HpyF10VI GCNNNNNNNGC 7 cut(s) 29, 640, 876, 983, 992, 996, 1023
HpyF3I CTNAG 4 cut(s) 27, 162, 464, 576
Hsp92I GRCGYC 1 cut(s) 555
Hsp92II CATG 3 cut(s) 743, 760, 1143
HspAI GCGC 1 cut(s) 245
Ksp22I TGATCA 1 cut(s) 450
Kzo9I GATC 3 cut(s) 445, 450, 1123
LmnI GCTCC 3 cut(s) 394, 743, 1019
Lsp1109I GCAGC 3 cut(s) 275, 646, 1070
LweI GCATC 1 cut(s) 874
MaeI CTAG 1 cut(s) 309
MaeIII GTNAC 2 cut(s) 521, 925
MalI GATC 3 cut(s) 447, 452, 1125
MbiI CCGCTC 1 cut(s) 657
MboI GATC 3 cut(s) 445, 450, 1123
MboII GAAGA 1 cut(s) 676
MflI RGATCY 2 cut(s) 445, 1123
MhlI GDGCHC 5 cut(s) 160, 399, 488, 575, 797
MlsI TGGCCA 2 cut(s) 293, 536
MluCI AATT 1 cut(s) 1116
MluNI TGGCCA 2 cut(s) 293, 536
MmeI TCCRAC 2 cut(s) 754, 1063
Mox20I TGGCCA 2 cut(s) 293, 536
MscI TGGCCA 2 cut(s) 293, 536
MslI CAYNNNNRTG 2 cut(s) 302, 696
Msp20I TGGCCA 2 cut(s) 293, 536
MspI CCGG 7 cut(s) 281, 390, 482, 909, 1029, 1038, 1062
MspR9I CCNGG 8 cut(s) 315, 391, 483, 798, 960, 973, 1029, 1038
MvaI CCWGG 4 cut(s) 315, 798, 960, 973
MvnI CGCG 1 cut(s) 245
MwoI GCNNNNNNNGC 7 cut(s) 29, 640, 876, 983, 992, 996, 1023
NciI CCSGG 4 cut(s) 391, 483, 1029, 1038
NdeII GATC 3 cut(s) 445, 450, 1123
NlaIII CATG 3 cut(s) 743, 760, 1143
NlaIV GGNNCC 9 cut(s) 147, 181, 334, 480, 964, 1027, 1096, 1125, 1148
NmuCI GTSAC 1 cut(s) 925
NspI RCATGY 2 cut(s) 760, 1143
PceI AGGCCT 1 cut(s) 596
PcsI WCGNNNNNNNCGW 2 cut(s) 203, 780
PfeI GAWTC 1 cut(s) 1101
PflFI GACNNNGTC 1 cut(s) 851
PflMI CCANNNNNTGG 3 cut(s) 532, 972, 1143
PkrI GCNGC 5 cut(s) 244, 265, 636, 659, 1060
PpuMI RGGWCCY 2 cut(s) 332, 962
Psp124BI GAGCTC 1 cut(s) 399
Psp5II RGGWCCY 2 cut(s) 332, 962
Psp6I CCWGG 4 cut(s) 313, 796, 958, 971
PspGI CCWGG 4 cut(s) 313, 796, 958, 971
PspN4I GGNNCC 9 cut(s) 147, 181, 334, 480, 964, 1027, 1096, 1125, 1148
PspPI GGNCC 9 cut(s) 180, 332, 377, 507, 648, 836, 962, 1025, 1146
PspPPI RGGWCCY 2 cut(s) 332, 962
PstI CTGCAG 1 cut(s) 844
PsuI RGATCY 2 cut(s) 445, 1123
PsyI GACNNNGTC 1 cut(s) 851
RseI CAYNNNNRTG 2 cut(s) 302, 696
SacI GAGCTC 1 cut(s) 399
SatI GCNGC 5 cut(s) 243, 264, 635, 658, 1059
Sau3AI GATC 3 cut(s) 445, 450, 1123
Sau96I GGNCC 9 cut(s) 180, 332, 377, 507, 648, 836, 962, 1025, 1146
SbfI CCTGCAGG 1 cut(s) 844
ScrFI CCNGG 8 cut(s) 315, 391, 483, 798, 960, 973, 1029, 1038
SdaI CCTGCAGG 1 cut(s) 844
SduI GDGCHC 5 cut(s) 160, 399, 488, 575, 797
SfaNI GCATC 1 cut(s) 874
SfcI CTRYAG 2 cut(s) 234, 840
SinI GGWCC 4 cut(s) 332, 836, 962, 1146
SmiMI CAYNNNNRTG 2 cut(s) 302, 696
Sse8387I CCTGCAGG 1 cut(s) 844
Sse9I AATT 1 cut(s) 1116
SseBI AGGCCT 1 cut(s) 596
SsiI CCGC 8 cut(s) 117, 177, 243, 336, 476, 657, 945, 1017
SspMI CTAG 1 cut(s) 309
SstI GAGCTC 1 cut(s) 399
StuI AGGCCT 1 cut(s) 596
StyD4I CCNGG 8 cut(s) 313, 389, 481, 796, 958, 971, 1027, 1036
StyI CCWWGG 3 cut(s) 550, 600, 874
TaaI ACNGT 4 cut(s) 353, 532, 836, 853
TaqI TCGA 6 cut(s) 197, 206, 326, 488, 581, 1053
TasI AATT 1 cut(s) 1116
TauI GCSGC 2 cut(s) 245, 660
TfiI GAWTC 1 cut(s) 1101
TscAI CASTG 2 cut(s) 264, 506
TseFI GTSAC 1 cut(s) 925
TseI GCWGC 3 cut(s) 263, 634, 1058
Tsp45I GTSAC 1 cut(s) 925
TspGWI ACGGA 1 cut(s) 111
TspRI CASTG 2 cut(s) 264, 506
Tth111I GACNNNGTC 1 cut(s) 851
Van91I CCANNNNNTGG 3 cut(s) 532, 972, 1143
VpaK11BI GGWCC 4 cut(s) 332, 836, 962, 1146
XagI CCTNNNNNAGG 1 cut(s) 312
XceI RCATGY 2 cut(s) 760, 1143
XcmI CCANNNNNNNNNTGG 1 cut(s) 256
XspI CTAG 1 cut(s) 309
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.