RNA-binding protein 42-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G04500 AT3G04500 AT3G04500 |
| fragaria_vesca | FvH4_5g31050 FvH4_6g01880 FvH4_6g01880 |
| malus_domestica | MD04G1229900.v1.1 MD12G1247000.v1.1 MD12G1247100.v1.1 MD12G1247300.v1.1 |
| prunus_persica | Prupe.6G350000_v2.0.a1 |
| pyrus_communis | pycom04g20370 pycom04g20380 pycom12g22690 |
| rosa_chinensis | RchiOBHm_Chr1g0368131 RchiOBHm_Chr3g0449621 |
| rosa_laevigata | RLG00000025814 |
| rosa_multiflora | Rmu_sc0024237.1_g000001 Rmu_sc0038999.1_g000001 Rmu_ssc0000031.1_g000001 |
| rosa_roxburghii | Rroxscaffold_6G00427520 |
| rosa_rugosa | Rorug02G0622600 |
| rosa_samantha | Rh1AG346200 Rh1BG308500 Rh1CG324200 Rh1DG340600 |
| rosa_wichuraiana | Rw3G001670 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 112 |
| AcuI | CTGAAG | 1 cut(s) | 108 |
| AfaI | GTAC | 2 cut(s) | 16, 160 |
| AgsI | TTSAA | 1 cut(s) | 49 |
| AjnI | CCWGG | 1 cut(s) | 168 |
| AluBI | AGCT | 3 cut(s) | 53, 86, 92 |
| AluI | AGCT | 3 cut(s) | 53, 86, 92 |
| Alw21I | GWGCWC | 1 cut(s) | 81 |
| Alw26I | GTCTC | 1 cut(s) | 167 |
| Alw44I | GTGCAC | 1 cut(s) | 77 |
| ApaLI | GTGCAC | 1 cut(s) | 77 |
| ApeKI | GCWGC | 1 cut(s) | 53 |
| AsuHPI | GGTGA | 1 cut(s) | 155 |
| BaeGI | GKGCMC | 1 cut(s) | 81 |
| Bbv12I | GWGCWC | 1 cut(s) | 81 |
| BbvI | GCAGC | 1 cut(s) | 40 |
| BciT130I | CCWGG | 1 cut(s) | 170 |
| BcoDI | GTCTC | 1 cut(s) | 167 |
| BisI | GCNGC | 1 cut(s) | 54 |
| BlpI | GCTNAGC | 1 cut(s) | 93 |
| BlsI | GCNGC | 1 cut(s) | 55 |
| Bme1390I | CCNGG | 1 cut(s) | 170 |
| BmrFI | CCNGG | 1 cut(s) | 170 |
| BpmI | CTGGAG | 2 cut(s) | 59, 191 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 93 |
| BsaI | GGTCTC | 1 cut(s) | 167 |
| BseBI | CCWGG | 1 cut(s) | 170 |
| BseGI | GGATG | 1 cut(s) | 17 |
| BseMII | CTCAG | 1 cut(s) | 149 |
| BseSI | GKGCMC | 1 cut(s) | 81 |
| BseXI | GCAGC | 1 cut(s) | 40 |
| BsiHKAI | GWGCWC | 1 cut(s) | 81 |
| BsmAI | GTCTC | 1 cut(s) | 167 |
| Bso31I | GGTCTC | 1 cut(s) | 167 |
| Bsp1286I | GDGCHC | 1 cut(s) | 81 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 93 |
| BspACI | CCGC | 1 cut(s) | 112 |
| BspCNI | CTCAG | 1 cut(s) | 148 |
| BspTNI | GGTCTC | 1 cut(s) | 167 |
| Bst2UI | CCWGG | 1 cut(s) | 170 |
| Bst4CI | ACNGT | 2 cut(s) | 68, 163 |
| BstDEI | CTNAG | 2 cut(s) | 93, 135 |
| BstF5I | GGATG | 1 cut(s) | 17 |
| BstMAI | GTCTC | 1 cut(s) | 167 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 59 |
| BstNI | CCWGG | 1 cut(s) | 170 |
| BstSCI | CCNGG | 1 cut(s) | 168 |
| BstSLI | GKGCMC | 1 cut(s) | 81 |
| BstV1I | GCAGC | 1 cut(s) | 40 |
| BtsCI | GGATG | 1 cut(s) | 17 |
| Csp6I | GTAC | 2 cut(s) | 15, 159 |
| CviAII | CATG | 1 cut(s) | 196 |
| CviJI | RGCY | 3 cut(s) | 53, 86, 92 |
| CviKI_1 | RGCY | 3 cut(s) | 53, 86, 92 |
| CviQI | GTAC | 2 cut(s) | 15, 159 |
| DdeI | CTNAG | 2 cut(s) | 93, 135 |
| Eco31I | GGTCTC | 1 cut(s) | 167 |
| Eco57I | CTGAAG | 1 cut(s) | 108 |
| EcoRII | CCWGG | 1 cut(s) | 168 |
| FaeI | CATG | 1 cut(s) | 199 |
| FaiI | YATR | 2 cut(s) | 187, 197 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 42, 74 |
| FatI | CATG | 1 cut(s) | 195 |
| FauI | CCCGC | 1 cut(s) | 119 |
| Fnu4HI | GCNGC | 1 cut(s) | 54 |
| FokI | GGATG | 1 cut(s) | 24 |
| Fsp4HI | GCNGC | 1 cut(s) | 54 |
| GluI | GCNGC | 1 cut(s) | 54 |
| GsuI | CTGGAG | 2 cut(s) | 59, 191 |
| Hin1II | CATG | 1 cut(s) | 199 |
| HphI | GGTGA | 1 cut(s) | 155 |
| Hpy166II | GTNNAC | 1 cut(s) | 79 |
| Hpy188I | TCNGA | 1 cut(s) | 138 |
| Hpy8I | GTNNAC | 1 cut(s) | 79 |
| HpyCH4III | ACNGT | 2 cut(s) | 68, 163 |
| HpyCH4V | TGCA | 2 cut(s) | 62, 79 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 59 |
| HpyF3I | CTNAG | 2 cut(s) | 93, 135 |
| Hsp92II | CATG | 1 cut(s) | 199 |
| LpnPI | CCDG | 6 cut(s) | 23, 42, 135, 141, 155, 182 |
| Lsp1109I | GCAGC | 1 cut(s) | 40 |
| MfeI | CAATTG | 1 cut(s) | 179 |
| MhlI | GDGCHC | 1 cut(s) | 81 |
| MluCI | AATT | 1 cut(s) | 179 |
| MmeI | TCCRAC | 1 cut(s) | 142 |
| MnlI | CCTC | 1 cut(s) | 13 |
| MseI | TTAA | 1 cut(s) | 155 |
| MspR9I | CCNGG | 1 cut(s) | 170 |
| MunI | CAATTG | 1 cut(s) | 179 |
| MvaI | CCWGG | 1 cut(s) | 170 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 59 |
| NlaIII | CATG | 1 cut(s) | 199 |
| PkrI | GCNGC | 1 cut(s) | 55 |
| Psp6I | CCWGG | 1 cut(s) | 168 |
| PspGI | CCWGG | 1 cut(s) | 168 |
| RsaI | GTAC | 2 cut(s) | 16, 160 |
| RsaNI | GTAC | 2 cut(s) | 15, 159 |
| SaqAI | TTAA | 1 cut(s) | 155 |
| SatI | GCNGC | 1 cut(s) | 54 |
| ScrFI | CCNGG | 1 cut(s) | 170 |
| SduI | GDGCHC | 1 cut(s) | 81 |
| SetI | ASST | 4 cut(s) | 55, 88, 94, 145 |
| SgeI | CNNG | 8 cut(s) | 41, 50, 71, 123, 134, 140, 181, 182 |
| Sse9I | AATT | 1 cut(s) | 179 |
| SsiI | CCGC | 1 cut(s) | 112 |
| StyD4I | CCNGG | 1 cut(s) | 168 |
| TaaI | ACNGT | 2 cut(s) | 68, 163 |
| TasI | AATT | 1 cut(s) | 179 |
| TatI | WGTACW | 1 cut(s) | 158 |
| Tru1I | TTAA | 1 cut(s) | 155 |
| Tru9I | TTAA | 1 cut(s) | 155 |
| TseI | GCWGC | 1 cut(s) | 53 |
| TspGWI | ACGGA | 2 cut(s) | 24, 32 |
| VneI | GTGCAC | 1 cut(s) | 77 |