Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G18475 |
| fragaria_vesca | FvH4_5g35730 FvH4_5g35730 FvH4_5g35730 FvH4_5g35730 FvH4_5g35730 |
| prunus_persica | Prupe.1G528200_v2.0.a1 |
| pyrus_communis | pycom08g16680 |
| rosa_chinensis | RchiOBHm_Chr4g0424581 RchiOBHm_Chr7g0237351 |
| rosa_laevigata | RLG00000001010 RLG00000007454 |
| rosa_multiflora | Rmu_co8091050.1_g000001 Rmu_sc0000281.1_g000013 Rmu_sc0000820.1_g000045 Rmu_sc0002603.1_g000021 Rmu_sc0002923.1_g000038 Rmu_sc0006438.1_g000010 |
| rosa_roxburghii | Rroxscaffold_3G00224290 Rroxscaffold_3G00224300 Rroxscaffold_5G00366500 |
| rosa_rugosa | Rorug04G0198000 Rorug07G0302800 Rorug07G0302800 |
| rosa_samantha | Rh1CG247200 Rh1DG083900 Rh4AG254700 Rh4BG260200 Rh4CG271700 Rh4DG254900 Rh5AG212800 Rh6DG464200 Rh7AG460000 Rh7BG429900 Rh7CG477300 Rh7DG446600 |
| rosa_wichuraiana | Rw1G023340 Rw4G022020 Rw7G038100 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 270 |
| AfaI | GTAC | 2 cut(s) | 60, 124 |
| AgsI | TTSAA | 6 cut(s) | 36, 65, 146, 190, 208, 269 |
| AluBI | AGCT | 2 cut(s) | 211, 310 |
| AluI | AGCT | 2 cut(s) | 211, 310 |
| AlwI | GGATC | 1 cut(s) | 270 |
| AoxI | GGCC | 1 cut(s) | 165 |
| AspS9I | GGNCC | 1 cut(s) | 166 |
| BccI | CCATC | 1 cut(s) | 112 |
| BmcAI | AGTACT | 2 cut(s) | 60, 124 |
| BmgT120I | GGNCC | 1 cut(s) | 166 |
| Bse1I | ACTGG | 1 cut(s) | 86 |
| Bse3DI | GCAATG | 1 cut(s) | 247 |
| BseMI | GCAATG | 1 cut(s) | 247 |
| BseNI | ACTGG | 1 cut(s) | 86 |
| BshFI | GGCC | 1 cut(s) | 167 |
| BsnI | GGCC | 1 cut(s) | 167 |
| Bsp143I | GATC | 1 cut(s) | 262 |
| BspANI | GGCC | 1 cut(s) | 167 |
| BspHI | TCATGA | 1 cut(s) | 21 |
| BspPI | GGATC | 1 cut(s) | 270 |
| BsrDI | GCAATG | 1 cut(s) | 247 |
| BsrI | ACTGG | 1 cut(s) | 86 |
| BssMI | GATC | 1 cut(s) | 262 |
| Bst4CI | ACNGT | 1 cut(s) | 174 |
| Bst6I | CTCTTC | 1 cut(s) | 188 |
| BstDEI | CTNAG | 1 cut(s) | 306 |
| BstKTI | GATC | 1 cut(s) | 265 |
| BstMBI | GATC | 1 cut(s) | 262 |
| BstNSI | RCATGY | 1 cut(s) | 222 |
| BstX2I | RGATCY | 1 cut(s) | 262 |
| BstYI | RGATCY | 1 cut(s) | 262 |
| BsuRI | GGCC | 1 cut(s) | 167 |
| CciI | TCATGA | 1 cut(s) | 21 |
| Cfr13I | GGNCC | 1 cut(s) | 166 |
| Csp6I | GTAC | 2 cut(s) | 59, 123 |
| CviAII | CATG | 4 cut(s) | 22, 50, 181, 219 |
| CviJI | RGCY | 5 cut(s) | 85, 103, 167, 211, 310 |
| CviKI_1 | RGCY | 5 cut(s) | 85, 103, 167, 211, 310 |
| CviQI | GTAC | 2 cut(s) | 59, 123 |
| DdeI | CTNAG | 1 cut(s) | 306 |
| DpnI | GATC | 1 cut(s) | 264 |
| DpnII | GATC | 1 cut(s) | 262 |
| DraI | TTTAAA | 1 cut(s) | 132 |
| Eam1104I | CTCTTC | 1 cut(s) | 188 |
| EarI | CTCTTC | 1 cut(s) | 188 |
| EcoT22I | ATGCAT | 4 cut(s) | 51, 119, 186, 224 |
| FaeI | CATG | 4 cut(s) | 25, 53, 184, 222 |
| FaiI | YATR | 7 cut(s) | 8, 23, 47, 51, 75, 182, 220 |
| FatI | CATG | 4 cut(s) | 21, 49, 180, 218 |
| HaeIII | GGCC | 1 cut(s) | 167 |
| Hin1II | CATG | 4 cut(s) | 25, 53, 184, 222 |
| HincII | GTYRAC | 1 cut(s) | 229 |
| HindII | GTYRAC | 1 cut(s) | 229 |
| HindIII | AAGCTT | 1 cut(s) | 308 |
| HinfI | GANTC | 4 cut(s) | 151, 196, 269, 329 |
| Hpy166II | GTNNAC | 1 cut(s) | 229 |
| Hpy188III | TCNNGA | 3 cut(s) | 22, 95, 266 |
| Hpy8I | GTNNAC | 1 cut(s) | 229 |
| HpyAV | CCTTC | 2 cut(s) | 283, 286 |
| HpyCH4III | ACNGT | 1 cut(s) | 174 |
| HpyCH4V | TGCA | 5 cut(s) | 49, 117, 184, 222, 252 |
| HpyF3I | CTNAG | 1 cut(s) | 306 |
| Hsp92II | CATG | 4 cut(s) | 25, 53, 184, 222 |
| Kzo9I | GATC | 1 cut(s) | 262 |
| LpnPI | CCDG | 3 cut(s) | 95, 99, 140 |
| MalI | GATC | 1 cut(s) | 264 |
| MboI | GATC | 1 cut(s) | 262 |
| MboII | GAAGA | 2 cut(s) | 202, 205 |
| MflI | RGATCY | 1 cut(s) | 262 |
| MluCI | AATT | 3 cut(s) | 38, 322, 334 |
| MlyI | GAGTC | 2 cut(s) | 205, 323 |
| MnlI | CCTC | 1 cut(s) | 274 |
| Mph1103I | ATGCAT | 4 cut(s) | 51, 119, 186, 224 |
| MseI | TTAA | 4 cut(s) | 15, 131, 201, 240 |
| NdeII | GATC | 1 cut(s) | 262 |
| NlaIII | CATG | 4 cut(s) | 25, 53, 184, 222 |
| NsiI | ATGCAT | 4 cut(s) | 51, 119, 186, 224 |
| NspI | RCATGY | 1 cut(s) | 222 |
| PagI | TCATGA | 1 cut(s) | 21 |
| PfeI | GAWTC | 2 cut(s) | 151, 269 |
| PleI | GAGTC | 2 cut(s) | 204, 323 |
| PpsI | GAGTC | 2 cut(s) | 204, 323 |
| PspPI | GGNCC | 1 cut(s) | 166 |
| PsuI | RGATCY | 1 cut(s) | 262 |
| RsaI | GTAC | 2 cut(s) | 60, 124 |
| RsaNI | GTAC | 2 cut(s) | 59, 123 |
| SaqAI | TTAA | 4 cut(s) | 15, 131, 201, 240 |
| Sau3AI | GATC | 1 cut(s) | 262 |
| Sau96I | GGNCC | 1 cut(s) | 166 |
| ScaI | AGTACT | 2 cut(s) | 60, 124 |
| SchI | GAGTC | 2 cut(s) | 205, 323 |
| SetI | ASST | 4 cut(s) | 159, 213, 285, 312 |
| Sse9I | AATT | 3 cut(s) | 38, 322, 334 |
| TaaI | ACNGT | 1 cut(s) | 174 |
| TaqI | TCGA | 1 cut(s) | 279 |
| TasI | AATT | 3 cut(s) | 38, 322, 334 |
| TatI | WGTACW | 2 cut(s) | 58, 122 |
| TfiI | GAWTC | 2 cut(s) | 151, 269 |
| Tru1I | TTAA | 4 cut(s) | 15, 131, 201, 240 |
| Tru9I | TTAA | 4 cut(s) | 15, 131, 201, 240 |
| TspDTI | ATGAA | 3 cut(s) | 38, 66, 311 |
| XceI | RCATGY | 1 cut(s) | 222 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 254 |
| ZrmI | AGTACT | 2 cut(s) | 60, 124 |
| Zsp2I | ATGCAT | 4 cut(s) | 51, 119, 186, 224 |