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| Species | Orthologous Gene IDs |
|---|---|
| rosa_laevigata | RLG00000011729 RLG00000014626 RLG00000021567 RLG00000030167 RLG00000036677 |
| rosa_roxburghii | Rroxscaffold_1G00004760 Rroxscaffold_2G00085340 Rroxscaffold_7G00171820 Rroxscaffold_7G00178220 Rroxscaffold_7G00178230 |
| rosa_samantha | Rh2AG422800 Rh5DG541800 Rh6AG097700 Rh6BG378200 Rh6CG056100 Rh6CG383800 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AfaI | GTAC | 1 cut(s) | 30 |
| AgsI | TTSAA | 1 cut(s) | 306 |
| AluBI | AGCT | 3 cut(s) | 41, 91, 236 |
| AluI | AGCT | 3 cut(s) | 41, 91, 236 |
| Alw26I | GTCTC | 2 cut(s) | 87, 259 |
| AoxI | GGCC | 2 cut(s) | 152, 249 |
| ApaI | GGGCCC | 1 cut(s) | 156 |
| ApeKI | GCWGC | 1 cut(s) | 41 |
| AspS9I | GGNCC | 4 cut(s) | 152, 153, 243, 250 |
| AvaII | GGWCC | 1 cut(s) | 243 |
| BaeGI | GKGCMC | 1 cut(s) | 156 |
| BanII | GRGCYC | 1 cut(s) | 156 |
| BbvCI | CCTCAGC | 1 cut(s) | 66 |
| BbvI | GCAGC | 1 cut(s) | 28 |
| BcoDI | GTCTC | 2 cut(s) | 87, 259 |
| BfaI | CTAG | 1 cut(s) | 237 |
| BisI | GCNGC | 1 cut(s) | 42 |
| BlsI | GCNGC | 1 cut(s) | 43 |
| Bme18I | GGWCC | 1 cut(s) | 243 |
| BmgT120I | GGNCC | 4 cut(s) | 152, 153, 243, 250 |
| BmiI | GGNNCC | 2 cut(s) | 154, 155 |
| BmrI | ACTGGG | 1 cut(s) | 220 |
| BmuI | ACTGGG | 1 cut(s) | 220 |
| Bpu10I | CCTNAGC | 2 cut(s) | 66, 290 |
| BpuEI | CTTGAG | 1 cut(s) | 113 |
| BsaI | GGTCTC | 1 cut(s) | 259 |
| BsaJI | CCNNGG | 2 cut(s) | 148, 246 |
| Bse1I | ACTGG | 1 cut(s) | 226 |
| BseDI | CCNNGG | 2 cut(s) | 148, 246 |
| BseMII | CTCAG | 3 cut(s) | 36, 80, 152 |
| BseNI | ACTGG | 1 cut(s) | 226 |
| BseSI | GKGCMC | 1 cut(s) | 156 |
| BseXI | GCAGC | 1 cut(s) | 28 |
| BseYI | CCCAGC | 4 cut(s) | 60, 87, 108, 205 |
| BsgI | GTGCAG | 1 cut(s) | 146 |
| BshFI | GGCC | 2 cut(s) | 154, 251 |
| BslFI | GGGAC | 2 cut(s) | 115, 169 |
| BsmAI | GTCTC | 2 cut(s) | 87, 259 |
| BsmFI | GGGAC | 2 cut(s) | 115, 169 |
| BsmI | GAATGC | 1 cut(s) | 55 |
| BsnI | GGCC | 2 cut(s) | 154, 251 |
| Bso31I | GGTCTC | 1 cut(s) | 259 |
| Bsp120I | GGGCCC | 1 cut(s) | 152 |
| Bsp1286I | GDGCHC | 1 cut(s) | 156 |
| Bsp1407I | TGTACA | 1 cut(s) | 28 |
| BspANI | GGCC | 2 cut(s) | 154, 251 |
| BspCNI | CTCAG | 3 cut(s) | 37, 79, 151 |
| BspLI | GGNNCC | 2 cut(s) | 154, 155 |
| BspTNI | GGTCTC | 1 cut(s) | 259 |
| BsrGI | TGTACA | 1 cut(s) | 28 |
| BsrI | ACTGG | 1 cut(s) | 226 |
| BssECI | CCNNGG | 2 cut(s) | 148, 246 |
| BssT1I | CCWWGG | 2 cut(s) | 148, 246 |
| BstAUI | TGTACA | 1 cut(s) | 28 |
| BstC8I | GCNNGC | 1 cut(s) | 114 |
| BstDEI | CTNAG | 4 cut(s) | 45, 66, 138, 290 |
| BstMAI | GTCTC | 2 cut(s) | 87, 259 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 41, 50, 109 |
| BstNSI | RCATGY | 1 cut(s) | 116 |
| BstSLI | GKGCMC | 1 cut(s) | 156 |
| BstV1I | GCAGC | 1 cut(s) | 28 |
| BsuRI | GGCC | 2 cut(s) | 154, 251 |
| Cac8I | GCNNGC | 1 cut(s) | 114 |
| Cfr13I | GGNCC | 4 cut(s) | 152, 153, 243, 250 |
| Csp6I | GTAC | 1 cut(s) | 29 |
| CviAII | CATG | 1 cut(s) | 113 |
| CviQI | GTAC | 1 cut(s) | 29 |
| DdeI | CTNAG | 4 cut(s) | 45, 66, 138, 290 |
| Eco130I | CCWWGG | 2 cut(s) | 148, 246 |
| Eco24I | GRGCYC | 1 cut(s) | 156 |
| Eco31I | GGTCTC | 1 cut(s) | 259 |
| Eco47I | GGWCC | 1 cut(s) | 243 |
| EcoO109I | RGGNCCY | 3 cut(s) | 152, 153, 250 |
| EcoT14I | CCWWGG | 2 cut(s) | 148, 246 |
| EcoT22I | ATGCAT | 1 cut(s) | 78 |
| EcoT38I | GRGCYC | 1 cut(s) | 156 |
| ErhI | CCWWGG | 2 cut(s) | 148, 246 |
| FaeI | CATG | 1 cut(s) | 116 |
| FaiI | YATR | 6 cut(s) | 74, 78, 80, 114, 168, 261 |
| FaqI | GGGAC | 2 cut(s) | 115, 169 |
| FatI | CATG | 1 cut(s) | 112 |
| FauNDI | CATATG | 1 cut(s) | 78 |
| Fnu4HI | GCNGC | 1 cut(s) | 42 |
| FriOI | GRGCYC | 1 cut(s) | 156 |
| Fsp4HI | GCNGC | 1 cut(s) | 42 |
| FspBI | CTAG | 1 cut(s) | 237 |
| GluI | GCNGC | 1 cut(s) | 42 |
| GsaI | CCCAGC | 4 cut(s) | 64, 91, 112, 209 |
| HaeIII | GGCC | 2 cut(s) | 154, 251 |
| Hin1II | CATG | 1 cut(s) | 116 |
| Hpy188I | TCNGA | 1 cut(s) | 141 |
| HpyAV | CCTTC | 1 cut(s) | 114 |
| HpyCH4V | TGCA | 5 cut(s) | 20, 53, 76, 127, 284 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 41, 50, 109 |
| HpyF3I | CTNAG | 4 cut(s) | 45, 66, 138, 290 |
| Hsp92II | CATG | 1 cut(s) | 116 |
| Lsp1109I | GCAGC | 1 cut(s) | 28 |
| MaeI | CTAG | 1 cut(s) | 237 |
| MaeIII | GTNAC | 1 cut(s) | 143 |
| MhlI | GDGCHC | 1 cut(s) | 156 |
| MnlI | CCTC | 3 cut(s) | 75, 234, 285 |
| Mph1103I | ATGCAT | 1 cut(s) | 78 |
| Mva1269I | GAATGC | 1 cut(s) | 55 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 41, 50, 109 |
| NdeI | CATATG | 1 cut(s) | 78 |
| NlaIII | CATG | 1 cut(s) | 116 |
| NlaIV | GGNNCC | 2 cut(s) | 154, 155 |
| NmuCI | GTSAC | 1 cut(s) | 143 |
| NsiI | ATGCAT | 1 cut(s) | 78 |
| NspI | RCATGY | 1 cut(s) | 116 |
| PaeI | GCATGC | 1 cut(s) | 116 |
| PctI | GAATGC | 1 cut(s) | 55 |
| PkrI | GCNGC | 1 cut(s) | 43 |
| PspFI | CCCAGC | 4 cut(s) | 60, 87, 108, 205 |
| PspN4I | GGNNCC | 2 cut(s) | 154, 155 |
| PspOMI | GGGCCC | 1 cut(s) | 152 |
| PspPI | GGNCC | 4 cut(s) | 152, 153, 243, 250 |
| RsaI | GTAC | 1 cut(s) | 30 |
| RsaNI | GTAC | 1 cut(s) | 29 |
| SatI | GCNGC | 1 cut(s) | 42 |
| Sau96I | GGNCC | 4 cut(s) | 152, 153, 243, 250 |
| SduI | GDGCHC | 1 cut(s) | 156 |
| SetI | ASST | 5 cut(s) | 43, 93, 124, 238, 245 |
| SinI | GGWCC | 1 cut(s) | 243 |
| SmlI | CTYRAG | 1 cut(s) | 92 |
| SmoI | CTYRAG | 1 cut(s) | 92 |
| SphI | GCATGC | 1 cut(s) | 116 |
| SspMI | CTAG | 1 cut(s) | 237 |
| StyI | CCWWGG | 2 cut(s) | 148, 246 |
| TatI | WGTACW | 1 cut(s) | 28 |
| TseFI | GTSAC | 1 cut(s) | 143 |
| TseI | GCWGC | 1 cut(s) | 41 |
| Tsp45I | GTSAC | 1 cut(s) | 143 |
| VpaK11BI | GGWCC | 1 cut(s) | 243 |
| XceI | RCATGY | 1 cut(s) | 116 |
| XspI | CTAG | 1 cut(s) | 237 |
| Zsp2I | ATGCAT | 1 cut(s) | 78 |