Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2A

Orthogroup ID

OG0008725

Physical Location & Seq

Genomic Coordinates Reverse (-)

85214928 .. 85217169

Gene Structure 2242 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2AG627200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 930 bp

ATGGAGCCAGGCCGTCTTTTCTTTGAGCCTCAGCAAGGTGGTGGCGGCAACATGTTGTTCCTCGGGAGTGGTGATCACGTTTTCCGAGGGCCGAGATCGATAATTGGCATGGAGGAAACTTCGAGGAGGCGATCGTTTTTCAGCACTCAAGATGAATCGTACGAGGAGGAATATTACGACGAGCAGATGCCAGAGAAGAAGCGCCGCCTCACGGCCGAGCAGGTGCATCTGCTGGAGAAGAGCTTTGAGACAGATAACAAACTGGAGCCAGATCGGAAGACGCAGCTGGCCAAGAAGCTAGGGCTGCAGCCAAGACAGGTGGCTGTGTGGTTCCAGAATCGTAGGGCTCGCTGGAAGACAAAGCAGCTTGAGCGCGATTATGATGTTCTAAAAGCCTCTTATGACTCCCTTTTGGCTAACTATGATTCTATACTAAAGGAGAATCAGAAGCTCAAATCCGAGGTGGTCGCCATAACTGAGAAACTTGAAGCTAAAGATCAGGAGGAAAAAGGAGCAGCATTTGCAGGTGATCATCATCATCATGATGAGAAGCGTCTCCCTGGTCATCTTCTTCCAGGTGAGAAAGAGATGATCACGGATGTCAATGTTCCAATGAGCCTCCAGTTCGACGTGAAGGTTGAGGATCGCCTGAGCTCCGGGAGCGGTGCTTCCGCCGTGGTGGACGAGGAAGGCCCTCAGCACGTGGACAGCGGTGACTCGTATTTCCCAAGTAGCTCTGACGTCCACAATTATCCTCCTCCTCATCCTCCACATGATCATCACCACTGCATGGGGCTAGTAGGTGGGGTCCACTCGGAGGACGATGGCAGCGATGACGGTCGGAGTTACTTCTCTGATGTGTTTGCCGCCGCCGCGGCAGAGCAGCAGCCGGAGGAGGGCGTGTCGATGGGCTGGTGGGTGTGGTCCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006417 GO:0006950 GO:0006970 GO:0007275 GO:0008150 GO:0009314 GO:0009416 GO:0009628 GO:0009637 GO:0009651 GO:0009653 GO:0009889 GO:0009890 GO:0009891 GO:0009892 GO:0009893 GO:0009965 GO:0010016 GO:0010468 GO:0010556 GO:0010557 GO:0010558 GO:0010604 GO:0010605 GO:0010608 GO:0010628 GO:0010629 GO:0017148 GO:0019219 GO:0019222 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031328 GO:0032268 GO:0032269 GO:0032501 GO:0032502 GO:0034248 GO:0034249 GO:0042802 GO:0042803 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0046983 GO:0048366 GO:0048367 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051173 GO:0051246 GO:0051248 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0099402 GO:0140110 GO:1901363 GO:1902680 GO:1903506 GO:1903508 GO:1905392 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HALZ Homeobox

Protein Analysis

309

Amino Acids

35.03

Weight (kDa)

5.15

Isoelectric Point (pI)

62.62

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Homeodomain	PF00046	66 - 119	3.4e-18	Homeodomain
HALZ	PF02183	121 - 162	4.4e-18	Homeobox associated leucine zipper

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008725)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G20280 AT1G61200 AT3G01470
fragaria_vesca	FvH4_6g50570
malus_domestica	MD09G1035100.v1.1 MD13G1014900.v1.1 MD13G1196700.v1.1 MD17G1035400.v1.1
prunus_persica	Prupe.3G283200_v2.0.a1
pyrus_communis	pycom111g02800 pycom17g03260
rosa_chinensis	RchiOBHm_Chr2g0171091
rosa_laevigata	RLG00000022002
rosa_multiflora	Rmu_sc0004565.1_g000009 Rmu_sc0007623.1_g000001
rosa_roxburghii	Rroxscaffold_2G00080820
rosa_rugosa	Rorug02G0553600
rosa_samantha	Rh2AG627200 Rh2BG637100 Rh2CG606100 Rh2DG648700 Rh2DG654300
rosa_wichuraiana	Rw2G051910

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	211, 515
AatII	GACGTC	1 cut(s)	744
Acc36I	ACCTGC	2 cut(s)	211, 515
AccB7I	CCANNNNNTGG	1 cut(s)	790
AccBSI	CCGCTC	1 cut(s)	663
AccII	CGCG	2 cut(s)	375, 875
AciI	CCGC	9 cut(s)	45, 205, 663, 672, 711, 867, 870, 873, 875
AclWI	GGATC	1 cut(s)	651
AcoI	YGGCCR	2 cut(s)	213, 288
AcvI	CACGTG	1 cut(s)	703
AcyI	GRCGYC	1 cut(s)	741
AfaI	GTAC	1 cut(s)	161
AfiI	CCNNNNNNNGG	5 cut(s)	35, 211, 790, 817, 896
AflIII	ACRYGT	1 cut(s)	51
AgsI	TTSAA	1 cut(s)	488
AjiI	CACGTC	1 cut(s)	631
AjnI	CCWGG	3 cut(s)	7, 559, 574
AluBI	AGCT	8 cut(s)	243, 286, 298, 367, 451, 491, 654, 735
AluI	AGCT	8 cut(s)	243, 286, 298, 367, 451, 491, 654, 735
Alw21I	GWGCWC	1 cut(s)	656
Alw26I	GTCTC	2 cut(s)	242, 560
AlwI	GGATC	1 cut(s)	651
Ama87I	CYCGRG	1 cut(s)	62
AoxI	GGCC	5 cut(s)	10, 89, 213, 288, 691
ApeKI	GCWGC	8 cut(s)	283, 304, 307, 364, 515, 828, 883, 886
AspLEI	GCGC	2 cut(s)	204, 375
AspS9I	GGNCC	4 cut(s)	89, 692, 808, 924
AsuC2I	CCSGG	1 cut(s)	658
AsuHPI	GGTGA	5 cut(s)	83, 539, 590, 725, 773
AvaI	CYCGRG	1 cut(s)	62
AvaII	GGWCC	2 cut(s)	808, 924
BalI	TGGCCA	1 cut(s)	290
BanII	GRGCYC	2 cut(s)	349, 656
BbrPI	CACGTG	1 cut(s)	703
BbsI	GAAGAC	2 cut(s)	284, 362
Bbv12I	GWGCWC	1 cut(s)	656
BbvCI	CCTCAGC	2 cut(s)	30, 696
BbvI	GCAGC	8 cut(s)	291, 295, 319, 376, 527, 840, 895, 898
BccI	CCATC	2 cut(s)	818, 901
BceAI	ACGGC	2 cut(s)	228, 659
BciT130I	CCWGG	3 cut(s)	9, 561, 576
BclI	TGATCA	4 cut(s)	73, 529, 591, 775
BcnI	CCSGG	1 cut(s)	658
BcoDI	GTCTC	2 cut(s)	242, 560
BfaI	CTAG	2 cut(s)	299, 797
BfmI	CTRYAG	1 cut(s)	305
BfoI	RGCGCY	1 cut(s)	205
BfuAI	ACCTGC	2 cut(s)	211, 515
BglI	GCCNNNNNGGC	1 cut(s)	875
Bme1390I	CCNGG	4 cut(s)	9, 561, 576, 658
Bme18I	GGWCC	2 cut(s)	808, 924
BmeT110I	CYCGRG	1 cut(s)	62
BmgBI	CACGTC	1 cut(s)	631
BmgT120I	GGNCC	4 cut(s)	89, 692, 808, 924
BmiI	GGNNCC	4 cut(s)	6, 267, 332, 809
BmrFI	CCNGG	4 cut(s)	9, 561, 576, 658
BmsI	GCATC	2 cut(s)	177, 235
BpiI	GAAGAC	2 cut(s)	284, 362
BpmI	CTGGAG	3 cut(s)	254, 284, 605
Bpu10I	CCTNAGC	3 cut(s)	30, 650, 696
BpuEI	CTTGAG	2 cut(s)	132, 389
BpuMI	CCSGG	1 cut(s)	658
Bsa29I	ATCGAT	1 cut(s)	98
BsaAI	YACGTR	1 cut(s)	703
BsaBI	GATNNNNATC	1 cut(s)	534
BsaHI	GRCGYC	1 cut(s)	741
BsaJI	CCNNGG	6 cut(s)	61, 85, 459, 559, 675, 873
BsaXI	ACNNNNNCTCC	2 cut(s)	887, 917
Bsc4I	CCNNNNNNNGG	5 cut(s)	35, 211, 790, 817, 896
Bse1I	ACTGG	2 cut(s)	267, 622
Bse8I	GATNNNNATC	1 cut(s)	534
BseBI	CCWGG	3 cut(s)	9, 561, 576
BseCI	ATCGAT	1 cut(s)	98
BseDI	CCNNGG	6 cut(s)	61, 85, 459, 559, 675, 873
BseGI	GGATG	2 cut(s)	604, 763
BseJI	GATNNNNATC	1 cut(s)	534
BseLI	CCNNNNNNNGG	5 cut(s)	35, 211, 790, 817, 896
BseMII	CTCAG	4 cut(s)	44, 468, 641, 710
BseNI	ACTGG	2 cut(s)	267, 622
BseRI	GAGGAG	5 cut(s)	139, 179, 747, 750, 908
BseX3I	CGGCCG	1 cut(s)	213
BseXI	GCAGC	8 cut(s)	291, 295, 319, 376, 527, 840, 895, 898
Bsh1236I	CGCG	2 cut(s)	375, 875
Bsh1285I	CGRYCG	3 cut(s)	134, 216, 841
BshFI	GGCC	5 cut(s)	12, 91, 215, 290, 693
BshVI	ATCGAT	1 cut(s)	98
BsiEI	CGRYCG	3 cut(s)	134, 216, 841
BsiHKAI	GWGCWC	1 cut(s)	656
BsiHKCI	CYCGRG	1 cut(s)	62
BsiSI	CCGG	2 cut(s)	657, 890
BsiWI	CGTACG	1 cut(s)	159
BslI	CCNNNNNNNGG	5 cut(s)	35, 211, 790, 817, 896
BsmAI	GTCTC	2 cut(s)	242, 560
BsmBI	CGTCTC	1 cut(s)	560
BsnI	GGCC	5 cut(s)	12, 91, 215, 290, 693
BsoBI	CYCGRG	1 cut(s)	62
Bsp1286I	GDGCHC	2 cut(s)	349, 656
Bsp143I	GATC	9 cut(s)	73, 95, 131, 271, 496, 529, 591, 643, 775
BspACI	CCGC	9 cut(s)	45, 205, 663, 672, 711, 867, 870, 873, 875
BspANI	GGCC	5 cut(s)	12, 91, 215, 290, 693
BspCNI	CTCAG	4 cut(s)	43, 469, 642, 709
BspDI	ATCGAT	1 cut(s)	98
BspFNI	CGCG	2 cut(s)	375, 875
BspHI	TCATGA	1 cut(s)	541
BspLI	GGNNCC	4 cut(s)	6, 267, 332, 809
BspMAI	CTGCAG	1 cut(s)	309
BspMI	ACCTGC	2 cut(s)	211, 515
BspPI	GGATC	1 cut(s)	651
BspQI	GCTCTTC	1 cut(s)	233
BsrBI	CCGCTC	1 cut(s)	663
BsrI	ACTGG	2 cut(s)	267, 622
BssECI	CCNNGG	6 cut(s)	61, 85, 459, 559, 675, 873
BssMI	GATC	9 cut(s)	73, 95, 131, 271, 496, 529, 591, 643, 775
BssNI	GRCGYC	1 cut(s)	741
Bst2UI	CCWGG	3 cut(s)	9, 561, 576
Bst4CI	ACNGT	1 cut(s)	839
Bst6I	CTCTTC	1 cut(s)	233
BstACI	GRCGYC	1 cut(s)	741
BstAPI	GCANNNNNTGC	1 cut(s)	521
BstBAI	YACGTR	1 cut(s)	703
BstC8I	GCNNGC	2 cut(s)	288, 349
BstDEI	CTNAG	4 cut(s)	30, 477, 650, 696
BstDSI	CCRYGG	2 cut(s)	675, 873
BstENI	CCTNNNNNAGG	1 cut(s)	33
BstF5I	GGATG	2 cut(s)	604, 763
BstFNI	CGCG	2 cut(s)	375, 875
BstH2I	RGCGCY	1 cut(s)	205
BstHHI	GCGC	2 cut(s)	204, 375
BstKTI	GATC	9 cut(s)	76, 98, 134, 274, 499, 532, 594, 646, 778
BstMAI	GTCTC	2 cut(s)	242, 560
BstMBI	GATC	9 cut(s)	73, 95, 131, 271, 496, 529, 591, 643, 775
BstMCI	CGRYCG	3 cut(s)	134, 216, 841
BstMWI	GCNNNNNNNGC	6 cut(s)	304, 370, 521, 660, 872, 875
BstNI	CCWGG	3 cut(s)	9, 561, 576
BstNSI	RCATGY	1 cut(s)	55
BstSCI	CCNGG	4 cut(s)	7, 559, 574, 656
BstSFI	CTRYAG	1 cut(s)	305
BstUI	CGCG	2 cut(s)	375, 875
BstV1I	GCAGC	8 cut(s)	291, 295, 319, 376, 527, 840, 895, 898
BstV2I	GAAGAC	2 cut(s)	284, 362
BstZI	CGGCCG	1 cut(s)	213
Bsu15I	ATCGAT	1 cut(s)	98
BsuRI	GGCC	5 cut(s)	12, 91, 215, 290, 693
BsuTUI	ATCGAT	1 cut(s)	98
BtgI	CCRYGG	2 cut(s)	675, 873
BtgZI	GCGATG	1 cut(s)	846
BtrI	CACGTC	1 cut(s)	631
BtsCI	GGATG	2 cut(s)	604, 763
BtsI	GCAGTG	1 cut(s)	784
BtsIMutI	CAGTG	1 cut(s)	784
BveI	ACCTGC	2 cut(s)	211, 515
Cac8I	GCNNGC	2 cut(s)	288, 349
CciI	TCATGA	1 cut(s)	541
CfoI	GCGC	2 cut(s)	204, 375
Cfr13I	GGNCC	4 cut(s)	89, 692, 808, 924
Cfr42I	CCGCGG	1 cut(s)	876
ClaI	ATCGAT	1 cut(s)	98
CseI	GACGC	2 cut(s)	289, 542
Csp6I	GTAC	1 cut(s)	160
CspCI	CAANNNNNGTGG	2 cut(s)	300, 335
CviAII	CATG	5 cut(s)	52, 109, 542, 773, 790
CviQI	GTAC	1 cut(s)	160
DdeI	CTNAG	4 cut(s)	30, 477, 650, 696
DpnI	GATC	9 cut(s)	75, 97, 133, 273, 498, 531, 593, 645, 777
DpnII	GATC	9 cut(s)	73, 95, 131, 271, 496, 529, 591, 643, 775
EaeI	YGGCCR	2 cut(s)	213, 288
EagI	CGGCCG	1 cut(s)	213
Eam1104I	CTCTTC	1 cut(s)	233
EarI	CTCTTC	1 cut(s)	233
EciI	GGCGGA	1 cut(s)	661
Ecl136II	GAGCTC	1 cut(s)	654
EclXI	CGGCCG	1 cut(s)	213
Eco24I	GRGCYC	2 cut(s)	349, 656
Eco47I	GGWCC	2 cut(s)	808, 924
Eco52I	CGGCCG	1 cut(s)	213
Eco53kI	GAGCTC	1 cut(s)	654
Eco72I	CACGTG	1 cut(s)	703
Eco88I	CYCGRG	1 cut(s)	62
EcoICRI	GAGCTC	1 cut(s)	654
EcoNI	CCTNNNNNAGG	1 cut(s)	33
EcoO109I	RGGNCCY	1 cut(s)	692
EcoRII	CCWGG	3 cut(s)	7, 559, 574
EcoT38I	GRGCYC	2 cut(s)	349, 656
Esp3I	CGTCTC	1 cut(s)	560
FaeI	CATG	5 cut(s)	55, 112, 545, 776, 793
FatI	CATG	5 cut(s)	51, 108, 541, 772, 789
FbaI	TGATCA	4 cut(s)	73, 529, 591, 775
FokI	GGATG	2 cut(s)	611, 750
FriOI	GRGCYC	2 cut(s)	349, 656
FspBI	CTAG	2 cut(s)	299, 797
GlaI	GCGC	2 cut(s)	203, 374
GsuI	CTGGAG	3 cut(s)	254, 284, 605
HaeII	RGCGCY	1 cut(s)	205
HaeIII	GGCC	5 cut(s)	12, 91, 215, 290, 693
HapII	CCGG	2 cut(s)	657, 890
HgaI	GACGC	2 cut(s)	289, 542
HhaI	GCGC	2 cut(s)	204, 375
Hin1I	GRCGYC	1 cut(s)	741
Hin1II	CATG	5 cut(s)	55, 112, 545, 776, 793
Hin6I	GCGC	2 cut(s)	202, 373
HinP1I	GCGC	2 cut(s)	202, 373
HinfI	GANTC	6 cut(s)	155, 337, 404, 425, 442, 716
HpaII	CCGG	2 cut(s)	657, 890
HphI	GGTGA	5 cut(s)	83, 539, 590, 725, 773
Hpy166II	GTNNAC	4 cut(s)	682, 706, 745, 811
Hpy188I	TCNGA	8 cut(s)	86, 276, 447, 460, 739, 817, 843, 856
Hpy188III	TCNNGA	5 cut(s)	64, 149, 334, 500, 542
Hpy8I	GTNNAC	4 cut(s)	682, 706, 745, 811
Hpy99I	CGWCG	2 cut(s)	182, 632
HpyAV	CCTTC	2 cut(s)	628, 683
HpyCH4III	ACNGT	1 cut(s)	839
HpyCH4IV	ACGT	4 cut(s)	78, 630, 702, 741
HpyCH4V	TGCA	4 cut(s)	226, 307, 524, 789
HpyF10VI	GCNNNNNNNGC	6 cut(s)	304, 370, 521, 660, 872, 875
HpyF3I	CTNAG	4 cut(s)	30, 477, 650, 696
HpySE526I	ACGT	4 cut(s)	78, 630, 702, 741
Hsp92I	GRCGYC	1 cut(s)	741
Hsp92II	CATG	5 cut(s)	55, 112, 545, 776, 793
HspAI	GCGC	2 cut(s)	202, 373
Ksp22I	TGATCA	4 cut(s)	73, 529, 591, 775
KspI	CCGCGG	1 cut(s)	876
Kzo9I	GATC	9 cut(s)	73, 95, 131, 271, 496, 529, 591, 643, 775
LguI	GCTCTTC	1 cut(s)	233
LmnI	GCTCC	5 cut(s)	4, 265, 512, 659, 660
Lsp1109I	GCAGC	8 cut(s)	291, 295, 319, 376, 527, 840, 895, 898
LweI	GCATC	2 cut(s)	177, 235
MaeI	CTAG	2 cut(s)	299, 797
MaeII	ACGT	4 cut(s)	78, 630, 702, 741
MaeIII	GTNAC	2 cut(s)	713, 845
MalI	GATC	9 cut(s)	75, 97, 133, 273, 498, 531, 593, 645, 777
MbiI	CCGCTC	1 cut(s)	663
MboI	GATC	9 cut(s)	73, 95, 131, 271, 496, 529, 591, 643, 775
MboII	GAAGA	6 cut(s)	208, 250, 289, 367, 560, 563
MhlI	GDGCHC	2 cut(s)	349, 656
MlsI	TGGCCA	1 cut(s)	290
MluCI	AATT	2 cut(s)	102, 748
MluNI	TGGCCA	1 cut(s)	290
MlyI	GAGTC	2 cut(s)	398, 710
MmeI	TCCRAC	1 cut(s)	821
Mox20I	TGGCCA	1 cut(s)	290
MscI	TGGCCA	1 cut(s)	290
MslI	CAYNNNNRTG	2 cut(s)	540, 543
Msp20I	TGGCCA	1 cut(s)	290
MspA1I	CMGCKG	3 cut(s)	286, 711, 875
MspI	CCGG	2 cut(s)	657, 890
MspR9I	CCNGG	4 cut(s)	9, 561, 576, 658
MvaI	CCWGG	3 cut(s)	9, 561, 576
MvnI	CGCG	2 cut(s)	375, 875
MwoI	GCNNNNNNNGC	6 cut(s)	304, 370, 521, 660, 872, 875
NciI	CCSGG	1 cut(s)	658
NdeII	GATC	9 cut(s)	73, 95, 131, 271, 496, 529, 591, 643, 775
NlaIII	CATG	5 cut(s)	55, 112, 545, 776, 793
NlaIV	GGNNCC	4 cut(s)	6, 267, 332, 809
NmeAIII	GCCGAG	2 cut(s)	117, 241
NmuCI	GTSAC	1 cut(s)	713
NspI	RCATGY	1 cut(s)	55
PagI	TCATGA	1 cut(s)	541
PaqCI	CACCTGC	2 cut(s)	211, 515
PciI	ACATGT	1 cut(s)	51
PciSI	GCTCTTC	1 cut(s)	233
PcsI	WCGNNNNNNNCGW	1 cut(s)	828
PfeI	GAWTC	4 cut(s)	155, 337, 425, 442
Pfl23II	CGTACG	1 cut(s)	159
PflMI	CCANNNNNTGG	1 cut(s)	790
PfoI	TCCNGGA	1 cut(s)	656
Ple19I	CGATCG	1 cut(s)	134
PleI	GAGTC	2 cut(s)	398, 710
PmaCI	CACGTG	1 cut(s)	703
PmlI	CACGTG	1 cut(s)	703
PpsI	GAGTC	2 cut(s)	398, 710
Ppu21I	YACGTR	1 cut(s)	703
PscI	ACATGT	1 cut(s)	51
Psp124BI	GAGCTC	1 cut(s)	656
Psp6I	CCWGG	3 cut(s)	7, 559, 574
PspCI	CACGTG	1 cut(s)	703
PspGI	CCWGG	3 cut(s)	7, 559, 574
PspLI	CGTACG	1 cut(s)	159
PspN4I	GGNNCC	4 cut(s)	6, 267, 332, 809
PspPI	GGNCC	4 cut(s)	89, 692, 808, 924
PstI	CTGCAG	1 cut(s)	309
PvuI	CGATCG	1 cut(s)	134
PvuII	CAGCTG	1 cut(s)	286
RsaI	GTAC	1 cut(s)	161
RsaNI	GTAC	1 cut(s)	160
RseI	CAYNNNNRTG	2 cut(s)	540, 543
SacI	GAGCTC	1 cut(s)	656
SacII	CCGCGG	1 cut(s)	876
SapI	GCTCTTC	1 cut(s)	233
Sau3AI	GATC	9 cut(s)	73, 95, 131, 271, 496, 529, 591, 643, 775
Sau96I	GGNCC	4 cut(s)	89, 692, 808, 924
SchI	GAGTC	2 cut(s)	398, 710
ScrFI	CCNGG	4 cut(s)	9, 561, 576, 658
SduI	GDGCHC	2 cut(s)	349, 656
SfaNI	GCATC	2 cut(s)	177, 235
SfcI	CTRYAG	1 cut(s)	305
Sfr303I	CCGCGG	1 cut(s)	876
SgrBI	CCGCGG	1 cut(s)	876
SinI	GGWCC	2 cut(s)	808, 924
SmiMI	CAYNNNNRTG	2 cut(s)	540, 543
SmlI	CTYRAG	2 cut(s)	147, 368
SmoI	CTYRAG	2 cut(s)	147, 368
Sse9I	AATT	2 cut(s)	102, 748
SsiI	CCGC	9 cut(s)	45, 205, 663, 672, 711, 867, 870, 873, 875
SspI	AATATT	1 cut(s)	173
SspMI	CTAG	2 cut(s)	299, 797
SstI	GAGCTC	1 cut(s)	656
StyD4I	CCNGG	4 cut(s)	7, 559, 574, 656
TaaI	ACNGT	1 cut(s)	839
TaiI	ACGT	4 cut(s)	81, 633, 705, 744
TaqI	TCGA	4 cut(s)	98, 122, 627, 905
TasI	AATT	2 cut(s)	102, 748
TauI	GCSGC	6 cut(s)	48, 207, 869, 872, 875, 878
TfiI	GAWTC	4 cut(s)	155, 337, 425, 442
TscAI	CASTG	1 cut(s)	791
TseFI	GTSAC	1 cut(s)	713
TseI	GCWGC	8 cut(s)	283, 304, 307, 364, 515, 828, 883, 886
Tsp45I	GTSAC	1 cut(s)	713
TspDTI	ATGAA	1 cut(s)	168
TspGWI	ACGGA	1 cut(s)	611
TspRI	CASTG	1 cut(s)	791
Van91I	CCANNNNNTGG	1 cut(s)	790
VpaK11BI	GGWCC	2 cut(s)	808, 924
XagI	CCTNNNNNAGG	1 cut(s)	33
XceI	RCATGY	1 cut(s)	55
XspI	CTAG	2 cut(s)	299, 797
ZraI	GACGTC	1 cut(s)	742

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.