Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2D

Orthogroup ID

OG0008725

Physical Location & Seq

Genomic Coordinates Reverse (-)

87509526 .. 87512377

Gene Structure 2852 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2DG648700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 927 bp

ATGGAGCCAGGCCGTCTTTTCTTTGAGCCTCAGCAAGGTGGTGGCGGCAACATGTTGTTCCTCGGGAGTGGTGATCACGTTTTCCGAGGGCCGAGATCGATAATTGGCATGGAGGAAACTTCGAGGAGGCGATCGTTTTTCAGCACGCAAGATGAATTGTACGAGGAGGAATATTACGACGAGCAGATGCCAGAGAAGAAGCGCCGCCTCACGGCCGAGCAGGTGCATCTGCTGGAGAAGAGCTTTGAGACAGATAACAAACTGGAGCCGGATCGGAAGACGCAGCTGGCCAAGAAGCTAGGGCTGCAGCCAAGACAGGTGGCTGTGTGGTTCCAGAATCGTAGGGCTCGCTGGAAGACAAAGCAGCTTGAGCGCGATTATGATGTTCTAAAAGCCTCTTATGACTCCCTTTTGGCTAACAATGATTCTATCCTCAAGGAGAATCAGAAGCTCAAATCCGAGGTGGTCGCCATAACTGAGAAACTTGAAGCTAAAGATCAGGAGGAAAAAGGAGCAGCATTTGCAGGTGATCATCATCATCCACATGAGAAGCGACTCCCTGGTCATCTTCTTCCAGGTGAGAAAGAGATGATCACGGATGTCAATGTTCCAATGAGCCTCCAGTTCGACGTGAAGGTTGAGGATCGCCTGAGCTCCGGGAGCGGCGCTTCGGCCGTGGTGGACGAGGAAGGCCCTCAGCACGTGGACAGCGGTGACTCGTATTTCCCAAGTAGCTCTGACGTCCACAATTATCCTCCTCATCCTCCACATGATCATCACCACTGCATGGGGCTAGTAGGTGGGGTCCACTCGGAGGACGATGGCAGCGATGACGGTCAGAGTTACTTCTCTGATGTGTTTGCCGCCGCCGCCGCAGAGCAGCAGCCGGAGGAGGGCGTGTCGATGGGTTGGTGGGTGTGGTCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006417 GO:0006950 GO:0006970 GO:0007275 GO:0008150 GO:0009314 GO:0009416 GO:0009628 GO:0009637 GO:0009651 GO:0009653 GO:0009889 GO:0009890 GO:0009891 GO:0009892 GO:0009893 GO:0009965 GO:0010016 GO:0010468 GO:0010556 GO:0010557 GO:0010558 GO:0010604 GO:0010605 GO:0010608 GO:0010628 GO:0010629 GO:0017148 GO:0019219 GO:0019222 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031328 GO:0032268 GO:0032269 GO:0032501 GO:0032502 GO:0034248 GO:0034249 GO:0042802 GO:0042803 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0046983 GO:0048366 GO:0048367 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051173 GO:0051246 GO:0051248 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0099402 GO:0140110 GO:1901363 GO:1902680 GO:1903506 GO:1903508 GO:1905392 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HALZ Homeobox

Protein Analysis

308

Amino Acids

34.86

Weight (kDa)

5.15

Isoelectric Point (pI)

60.68

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Homeodomain	PF00046	66 - 119	3.6e-18	Homeodomain
HALZ	PF02183	121 - 162	1.1e-17	Homeobox associated leucine zipper

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008725)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G20280 AT1G61200 AT3G01470
fragaria_vesca	FvH4_6g50570
malus_domestica	MD09G1035100.v1.1 MD13G1014900.v1.1 MD13G1196700.v1.1 MD17G1035400.v1.1
prunus_persica	Prupe.3G283200_v2.0.a1
pyrus_communis	pycom111g02800 pycom17g03260
rosa_chinensis	RchiOBHm_Chr2g0171091
rosa_laevigata	RLG00000022002
rosa_multiflora	Rmu_sc0004565.1_g000009 Rmu_sc0007623.1_g000001
rosa_roxburghii	Rroxscaffold_2G00080820
rosa_rugosa	Rorug02G0553600
rosa_samantha	Rh2AG627200 Rh2BG637100 Rh2CG606100 Rh2DG648700 Rh2DG654300
rosa_wichuraiana	Rw2G051910

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	211, 515
AasI	GACNNNNNNGTC	1 cut(s)	561
AatII	GACGTC	1 cut(s)	744
Acc36I	ACCTGC	2 cut(s)	211, 515
AccB7I	CCANNNNNTGG	1 cut(s)	787
AccBSI	CCGCTC	1 cut(s)	663
AccII	CGCG	1 cut(s)	375
AciI	CCGC	8 cut(s)	45, 205, 663, 711, 864, 867, 870, 873
AclWI	GGATC	2 cut(s)	279, 651
AcoI	YGGCCR	3 cut(s)	213, 288, 672
AcvI	CACGTG	1 cut(s)	703
AcyI	GRCGYC	1 cut(s)	741
AfaI	GTAC	1 cut(s)	161
AfiI	CCNNNNNNNGG	5 cut(s)	35, 211, 787, 814, 893
AflIII	ACRYGT	1 cut(s)	51
AgsI	TTSAA	1 cut(s)	488
AjiI	CACGTC	1 cut(s)	631
AjnI	CCWGG	3 cut(s)	7, 559, 574
AluBI	AGCT	8 cut(s)	243, 286, 298, 367, 451, 491, 654, 735
AluI	AGCT	8 cut(s)	243, 286, 298, 367, 451, 491, 654, 735
Alw21I	GWGCWC	1 cut(s)	656
Alw26I	GTCTC	1 cut(s)	242
AlwI	GGATC	2 cut(s)	279, 651
Ama87I	CYCGRG	1 cut(s)	62
AoxI	GGCC	6 cut(s)	10, 89, 213, 288, 672, 691
ApeKI	GCWGC	8 cut(s)	283, 304, 307, 364, 515, 825, 880, 883
AspLEI	GCGC	3 cut(s)	204, 375, 668
AspS9I	GGNCC	4 cut(s)	89, 692, 805, 921
AsuC2I	CCSGG	1 cut(s)	658
AsuHPI	GGTGA	5 cut(s)	83, 539, 590, 725, 770
AvaI	CYCGRG	1 cut(s)	62
AvaII	GGWCC	2 cut(s)	805, 921
BalI	TGGCCA	1 cut(s)	290
BanII	GRGCYC	2 cut(s)	349, 656
BbrPI	CACGTG	1 cut(s)	703
BbsI	GAAGAC	2 cut(s)	284, 362
Bbv12I	GWGCWC	1 cut(s)	656
BbvCI	CCTCAGC	2 cut(s)	30, 696
BbvI	GCAGC	8 cut(s)	291, 295, 319, 376, 527, 837, 892, 895
BccI	CCATC	2 cut(s)	815, 898
BceAI	ACGGC	2 cut(s)	228, 659
BciT130I	CCWGG	3 cut(s)	9, 561, 576
BclI	TGATCA	4 cut(s)	73, 529, 591, 772
BcnI	CCSGG	1 cut(s)	658
BcoDI	GTCTC	1 cut(s)	242
BfaI	CTAG	2 cut(s)	299, 794
BfmI	CTRYAG	1 cut(s)	305
BfoI	RGCGCY	2 cut(s)	205, 669
BfuAI	ACCTGC	2 cut(s)	211, 515
Bme1390I	CCNGG	4 cut(s)	9, 561, 576, 658
Bme18I	GGWCC	2 cut(s)	805, 921
BmeT110I	CYCGRG	1 cut(s)	62
BmgBI	CACGTC	1 cut(s)	631
BmgT120I	GGNCC	4 cut(s)	89, 692, 805, 921
BmiI	GGNNCC	4 cut(s)	6, 267, 332, 806
BmrFI	CCNGG	4 cut(s)	9, 561, 576, 658
BmsI	GCATC	2 cut(s)	177, 235
BpiI	GAAGAC	2 cut(s)	284, 362
BpmI	CTGGAG	3 cut(s)	254, 284, 605
Bpu10I	CCTNAGC	3 cut(s)	30, 650, 696
BpuEI	CTTGAG	2 cut(s)	389, 419
BpuMI	CCSGG	1 cut(s)	658
Bsa29I	ATCGAT	1 cut(s)	98
BsaAI	YACGTR	1 cut(s)	703
BsaBI	GATNNNNATC	1 cut(s)	534
BsaHI	GRCGYC	1 cut(s)	741
BsaJI	CCNNGG	5 cut(s)	61, 85, 459, 559, 675
BsaXI	ACNNNNNCTCC	2 cut(s)	884, 914
Bsc4I	CCNNNNNNNGG	5 cut(s)	35, 211, 787, 814, 893
Bse1I	ACTGG	2 cut(s)	267, 622
Bse8I	GATNNNNATC	1 cut(s)	534
BseBI	CCWGG	3 cut(s)	9, 561, 576
BseCI	ATCGAT	1 cut(s)	98
BseDI	CCNNGG	5 cut(s)	61, 85, 459, 559, 675
BseGI	GGATG	3 cut(s)	538, 604, 760
BseJI	GATNNNNATC	1 cut(s)	534
BseLI	CCNNNNNNNGG	5 cut(s)	35, 211, 787, 814, 893
BseMII	CTCAG	4 cut(s)	44, 468, 641, 710
BseNI	ACTGG	2 cut(s)	267, 622
BseRI	GAGGAG	4 cut(s)	139, 179, 747, 905
BseX3I	CGGCCG	2 cut(s)	213, 672
BseXI	GCAGC	8 cut(s)	291, 295, 319, 376, 527, 837, 892, 895
Bsh1236I	CGCG	1 cut(s)	375
Bsh1285I	CGRYCG	3 cut(s)	134, 216, 675
BshFI	GGCC	6 cut(s)	12, 91, 215, 290, 674, 693
BshVI	ATCGAT	1 cut(s)	98
BsiEI	CGRYCG	3 cut(s)	134, 216, 675
BsiHKAI	GWGCWC	1 cut(s)	656
BsiHKCI	CYCGRG	1 cut(s)	62
BsiSI	CCGG	3 cut(s)	269, 657, 887
BslI	CCNNNNNNNGG	5 cut(s)	35, 211, 787, 814, 893
BsmAI	GTCTC	1 cut(s)	242
BsnI	GGCC	6 cut(s)	12, 91, 215, 290, 674, 693
BsoBI	CYCGRG	1 cut(s)	62
Bsp1286I	GDGCHC	2 cut(s)	349, 656
Bsp143I	GATC	9 cut(s)	73, 95, 131, 271, 496, 529, 591, 643, 772
BspACI	CCGC	8 cut(s)	45, 205, 663, 711, 864, 867, 870, 873
BspANI	GGCC	6 cut(s)	12, 91, 215, 290, 674, 693
BspCNI	CTCAG	4 cut(s)	43, 469, 642, 709
BspDI	ATCGAT	1 cut(s)	98
BspFNI	CGCG	1 cut(s)	375
BspLI	GGNNCC	4 cut(s)	6, 267, 332, 806
BspMAI	CTGCAG	1 cut(s)	309
BspMI	ACCTGC	2 cut(s)	211, 515
BspPI	GGATC	2 cut(s)	279, 651
BspQI	GCTCTTC	1 cut(s)	233
BsrBI	CCGCTC	1 cut(s)	663
BsrI	ACTGG	2 cut(s)	267, 622
BssECI	CCNNGG	5 cut(s)	61, 85, 459, 559, 675
BssMI	GATC	9 cut(s)	73, 95, 131, 271, 496, 529, 591, 643, 772
BssNI	GRCGYC	1 cut(s)	741
Bst2UI	CCWGG	3 cut(s)	9, 561, 576
Bst4CI	ACNGT	1 cut(s)	836
Bst6I	CTCTTC	1 cut(s)	233
BstACI	GRCGYC	1 cut(s)	741
BstAPI	GCANNNNNTGC	1 cut(s)	521
BstBAI	YACGTR	1 cut(s)	703
BstC8I	GCNNGC	3 cut(s)	146, 288, 349
BstDEI	CTNAG	4 cut(s)	30, 477, 650, 696
BstDSI	CCRYGG	1 cut(s)	675
BstENI	CCTNNNNNAGG	1 cut(s)	33
BstF5I	GGATG	3 cut(s)	538, 604, 760
BstFNI	CGCG	1 cut(s)	375
BstH2I	RGCGCY	2 cut(s)	205, 669
BstHHI	GCGC	3 cut(s)	204, 375, 668
BstKTI	GATC	9 cut(s)	76, 98, 134, 274, 499, 532, 594, 646, 775
BstMAI	GTCTC	1 cut(s)	242
BstMBI	GATC	9 cut(s)	73, 95, 131, 271, 496, 529, 591, 643, 772
BstMCI	CGRYCG	3 cut(s)	134, 216, 675
BstMWI	GCNNNNNNNGC	6 cut(s)	304, 370, 521, 660, 869, 872
BstNI	CCWGG	3 cut(s)	9, 561, 576
BstNSI	RCATGY	1 cut(s)	55
BstSCI	CCNGG	4 cut(s)	7, 559, 574, 656
BstSFI	CTRYAG	1 cut(s)	305
BstUI	CGCG	1 cut(s)	375
BstV1I	GCAGC	8 cut(s)	291, 295, 319, 376, 527, 837, 892, 895
BstV2I	GAAGAC	2 cut(s)	284, 362
BstZI	CGGCCG	2 cut(s)	213, 672
Bsu15I	ATCGAT	1 cut(s)	98
BsuRI	GGCC	6 cut(s)	12, 91, 215, 290, 674, 693
BsuTUI	ATCGAT	1 cut(s)	98
BtgI	CCRYGG	1 cut(s)	675
BtgZI	GCGATG	1 cut(s)	843
BtrI	CACGTC	1 cut(s)	631
BtsCI	GGATG	3 cut(s)	538, 604, 760
BtsI	GCAGTG	1 cut(s)	781
BtsIMutI	CAGTG	1 cut(s)	781
BveI	ACCTGC	2 cut(s)	211, 515
Cac8I	GCNNGC	3 cut(s)	146, 288, 349
CfoI	GCGC	3 cut(s)	204, 375, 668
Cfr13I	GGNCC	4 cut(s)	89, 692, 805, 921
ClaI	ATCGAT	1 cut(s)	98
CseI	GACGC	1 cut(s)	289
Csp6I	GTAC	1 cut(s)	160
CspCI	CAANNNNNGTGG	2 cut(s)	300, 335
CviAII	CATG	5 cut(s)	52, 109, 545, 770, 787
CviQI	GTAC	1 cut(s)	160
DdeI	CTNAG	4 cut(s)	30, 477, 650, 696
DpnI	GATC	9 cut(s)	75, 97, 133, 273, 498, 531, 593, 645, 774
DpnII	GATC	9 cut(s)	73, 95, 131, 271, 496, 529, 591, 643, 772
DrdI	GACNNNNNNGTC	1 cut(s)	561
DseDI	GACNNNNNNGTC	1 cut(s)	561
EaeI	YGGCCR	3 cut(s)	213, 288, 672
EagI	CGGCCG	2 cut(s)	213, 672
Eam1104I	CTCTTC	1 cut(s)	233
EarI	CTCTTC	1 cut(s)	233
Ecl136II	GAGCTC	1 cut(s)	654
EclXI	CGGCCG	2 cut(s)	213, 672
Eco24I	GRGCYC	2 cut(s)	349, 656
Eco47I	GGWCC	2 cut(s)	805, 921
Eco52I	CGGCCG	2 cut(s)	213, 672
Eco53kI	GAGCTC	1 cut(s)	654
Eco72I	CACGTG	1 cut(s)	703
Eco88I	CYCGRG	1 cut(s)	62
EcoICRI	GAGCTC	1 cut(s)	654
EcoNI	CCTNNNNNAGG	1 cut(s)	33
EcoO109I	RGGNCCY	1 cut(s)	692
EcoRII	CCWGG	3 cut(s)	7, 559, 574
EcoT38I	GRGCYC	2 cut(s)	349, 656
FaeI	CATG	5 cut(s)	55, 112, 548, 773, 790
FaiI	YATR	8 cut(s)	53, 110, 381, 402, 473, 546, 771, 788
FatI	CATG	5 cut(s)	51, 108, 544, 769, 786
FbaI	TGATCA	4 cut(s)	73, 529, 591, 772
FokI	GGATG	3 cut(s)	525, 611, 747
FriOI	GRGCYC	2 cut(s)	349, 656
FspBI	CTAG	2 cut(s)	299, 794
GlaI	GCGC	3 cut(s)	203, 374, 667
GsuI	CTGGAG	3 cut(s)	254, 284, 605
HaeII	RGCGCY	2 cut(s)	205, 669
HaeIII	GGCC	6 cut(s)	12, 91, 215, 290, 674, 693
HapII	CCGG	3 cut(s)	269, 657, 887
HgaI	GACGC	1 cut(s)	289
HhaI	GCGC	3 cut(s)	204, 375, 668
Hin1I	GRCGYC	1 cut(s)	741
Hin1II	CATG	5 cut(s)	55, 112, 548, 773, 790
Hin6I	GCGC	3 cut(s)	202, 373, 666
HinP1I	GCGC	3 cut(s)	202, 373, 666
HinfI	GANTC	6 cut(s)	337, 404, 425, 442, 555, 716
HpaII	CCGG	3 cut(s)	269, 657, 887
HphI	GGTGA	5 cut(s)	83, 539, 590, 725, 770
Hpy166II	GTNNAC	4 cut(s)	682, 706, 745, 808
Hpy188I	TCNGA	8 cut(s)	86, 276, 447, 460, 739, 814, 840, 853
Hpy188III	TCNNGA	4 cut(s)	64, 334, 500, 924
Hpy8I	GTNNAC	4 cut(s)	682, 706, 745, 808
Hpy99I	CGWCG	2 cut(s)	182, 632
HpyAV	CCTTC	2 cut(s)	628, 683
HpyCH4III	ACNGT	1 cut(s)	836
HpyCH4IV	ACGT	4 cut(s)	78, 630, 702, 741
HpyCH4V	TGCA	4 cut(s)	226, 307, 524, 786
HpyF10VI	GCNNNNNNNGC	6 cut(s)	304, 370, 521, 660, 869, 872
HpyF3I	CTNAG	4 cut(s)	30, 477, 650, 696
HpySE526I	ACGT	4 cut(s)	78, 630, 702, 741
Hsp92I	GRCGYC	1 cut(s)	741
Hsp92II	CATG	5 cut(s)	55, 112, 548, 773, 790
HspAI	GCGC	3 cut(s)	202, 373, 666
Ksp22I	TGATCA	4 cut(s)	73, 529, 591, 772
Kzo9I	GATC	9 cut(s)	73, 95, 131, 271, 496, 529, 591, 643, 772
LguI	GCTCTTC	1 cut(s)	233
LmnI	GCTCC	5 cut(s)	4, 265, 512, 659, 660
Lsp1109I	GCAGC	8 cut(s)	291, 295, 319, 376, 527, 837, 892, 895
LweI	GCATC	2 cut(s)	177, 235
MaeI	CTAG	2 cut(s)	299, 794
MaeII	ACGT	4 cut(s)	78, 630, 702, 741
MaeIII	GTNAC	2 cut(s)	713, 842
MalI	GATC	9 cut(s)	75, 97, 133, 273, 498, 531, 593, 645, 774
MbiI	CCGCTC	1 cut(s)	663
MboI	GATC	9 cut(s)	73, 95, 131, 271, 496, 529, 591, 643, 772
MboII	GAAGA	6 cut(s)	208, 250, 289, 367, 560, 563
MhlI	GDGCHC	2 cut(s)	349, 656
MlsI	TGGCCA	1 cut(s)	290
MluCI	AATT	3 cut(s)	102, 155, 748
MluNI	TGGCCA	1 cut(s)	290
MlyI	GAGTC	3 cut(s)	398, 549, 710
Mox20I	TGGCCA	1 cut(s)	290
MscI	TGGCCA	1 cut(s)	290
MslI	CAYNNNNRTG	1 cut(s)	543
Msp20I	TGGCCA	1 cut(s)	290
MspA1I	CMGCKG	2 cut(s)	286, 711
MspI	CCGG	3 cut(s)	269, 657, 887
MspR9I	CCNGG	4 cut(s)	9, 561, 576, 658
MvaI	CCWGG	3 cut(s)	9, 561, 576
MvnI	CGCG	1 cut(s)	375
MwoI	GCNNNNNNNGC	6 cut(s)	304, 370, 521, 660, 869, 872
NciI	CCSGG	1 cut(s)	658
NdeII	GATC	9 cut(s)	73, 95, 131, 271, 496, 529, 591, 643, 772
NlaIII	CATG	5 cut(s)	55, 112, 548, 773, 790
NlaIV	GGNNCC	4 cut(s)	6, 267, 332, 806
NmeAIII	GCCGAG	2 cut(s)	117, 241
NmuCI	GTSAC	1 cut(s)	713
NspI	RCATGY	1 cut(s)	55
PaqCI	CACCTGC	2 cut(s)	211, 515
PciI	ACATGT	1 cut(s)	51
PciSI	GCTCTTC	1 cut(s)	233
PcsI	WCGNNNNNNNCGW	1 cut(s)	825
PfeI	GAWTC	3 cut(s)	337, 425, 442
PflMI	CCANNNNNTGG	1 cut(s)	787
PfoI	TCCNGGA	1 cut(s)	656
Ple19I	CGATCG	1 cut(s)	134
PleI	GAGTC	3 cut(s)	398, 549, 710
PmaCI	CACGTG	1 cut(s)	703
PmlI	CACGTG	1 cut(s)	703
PpsI	GAGTC	3 cut(s)	398, 549, 710
Ppu21I	YACGTR	1 cut(s)	703
PscI	ACATGT	1 cut(s)	51
Psp124BI	GAGCTC	1 cut(s)	656
Psp6I	CCWGG	3 cut(s)	7, 559, 574
PspCI	CACGTG	1 cut(s)	703
PspGI	CCWGG	3 cut(s)	7, 559, 574
PspN4I	GGNNCC	4 cut(s)	6, 267, 332, 806
PspPI	GGNCC	4 cut(s)	89, 692, 805, 921
PstI	CTGCAG	1 cut(s)	309
PvuI	CGATCG	1 cut(s)	134
PvuII	CAGCTG	1 cut(s)	286
RsaI	GTAC	1 cut(s)	161
RsaNI	GTAC	1 cut(s)	160
RseI	CAYNNNNRTG	1 cut(s)	543
SacI	GAGCTC	1 cut(s)	656
SapI	GCTCTTC	1 cut(s)	233
Sau3AI	GATC	9 cut(s)	73, 95, 131, 271, 496, 529, 591, 643, 772
Sau96I	GGNCC	4 cut(s)	89, 692, 805, 921
SchI	GAGTC	3 cut(s)	398, 549, 710
ScrFI	CCNGG	4 cut(s)	9, 561, 576, 658
SduI	GDGCHC	2 cut(s)	349, 656
SfaNI	GCATC	2 cut(s)	177, 235
SfcI	CTRYAG	1 cut(s)	305
SinI	GGWCC	2 cut(s)	805, 921
SmiMI	CAYNNNNRTG	1 cut(s)	543
SmlI	CTYRAG	2 cut(s)	368, 434
SmoI	CTYRAG	2 cut(s)	368, 434
Sse9I	AATT	3 cut(s)	102, 155, 748
SsiI	CCGC	8 cut(s)	45, 205, 663, 711, 864, 867, 870, 873
SspI	AATATT	1 cut(s)	173
SspMI	CTAG	2 cut(s)	299, 794
SstI	GAGCTC	1 cut(s)	656
StyD4I	CCNGG	4 cut(s)	7, 559, 574, 656
TaaI	ACNGT	1 cut(s)	836
TaiI	ACGT	4 cut(s)	81, 633, 705, 744
TaqI	TCGA	4 cut(s)	98, 122, 627, 902
TasI	AATT	3 cut(s)	102, 155, 748
TauI	GCSGC	7 cut(s)	48, 207, 666, 866, 869, 872, 875
TfiI	GAWTC	3 cut(s)	337, 425, 442
TscAI	CASTG	1 cut(s)	788
TseFI	GTSAC	1 cut(s)	713
TseI	GCWGC	8 cut(s)	283, 304, 307, 364, 515, 825, 880, 883
Tsp45I	GTSAC	1 cut(s)	713
TspDTI	ATGAA	1 cut(s)	168
TspGWI	ACGGA	1 cut(s)	611
TspRI	CASTG	1 cut(s)	788
Van91I	CCANNNNNTGG	1 cut(s)	787
VpaK11BI	GGWCC	2 cut(s)	805, 921
XagI	CCTNNNNNAGG	1 cut(s)	33
XceI	RCATGY	1 cut(s)	55
XspI	CTAG	2 cut(s)	299, 794
ZraI	GACGTC	1 cut(s)	742

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.