Domain of unknown function (DUF4408)
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G26130 AT5G56980 |
| fragaria_vesca | FvH4_1g07560 |
| malus_domestica | MD02G1080400.v1.1 MD15G1207800.v1.1 |
| prunus_persica | Prupe.7G209100_v2.0.a1 |
| pyrus_communis | pycom15g18410 |
| rosa_laevigata | RLG00000016403 |
| rosa_multiflora | Rmu_co8329807.1_g000001 Rmu_sc0004086.1_g000010 Rmu_sc0021911.1_g000006 |
| rosa_roxburghii | Rroxscaffold_2G00148090 |
| rosa_rugosa | Rorug02G0036200 Rorug02G0036300 |
| rosa_samantha | Rh2AG082500 Rh2BG083300 Rh2CG085300 Rh2DG081400 |
| rosa_wichuraiana | Rw2G006470 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 68 |
| AccBSI | CCGCTC | 1 cut(s) | 268 |
| AccI | GTMKAC | 1 cut(s) | 136 |
| AccII | CGCG | 2 cut(s) | 484, 665 |
| AccIII | TCCGGA | 2 cut(s) | 246, 357 |
| AciI | CCGC | 4 cut(s) | 88, 140, 268, 567 |
| AclWI | GGATC | 1 cut(s) | 408 |
| AcuI | CTGAAG | 1 cut(s) | 450 |
| AcyI | GRCGYC | 1 cut(s) | 362 |
| AfaI | GTAC | 1 cut(s) | 296 |
| AflIII | ACRYGT | 2 cut(s) | 157, 328 |
| AgeI | ACCGGT | 1 cut(s) | 687 |
| AgsI | TTSAA | 1 cut(s) | 694 |
| AjnI | CCWGG | 2 cut(s) | 150, 372 |
| AluBI | AGCT | 4 cut(s) | 21, 428, 671, 703 |
| AluI | AGCT | 4 cut(s) | 21, 428, 671, 703 |
| Alw26I | GTCTC | 2 cut(s) | 386, 480 |
| AlwI | GGATC | 1 cut(s) | 408 |
| Aor13HI | TCCGGA | 2 cut(s) | 246, 357 |
| AoxI | GGCC | 2 cut(s) | 375, 450 |
| ApeKI | GCWGC | 3 cut(s) | 610, 697, 700 |
| AsiGI | ACCGGT | 1 cut(s) | 687 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 435 |
| AspS9I | GGNCC | 2 cut(s) | 276, 376 |
| AsuC2I | CCSGG | 3 cut(s) | 206, 317, 422 |
| AsuHPI | GGTGA | 2 cut(s) | 194, 565 |
| AsuII | TTCGAA | 1 cut(s) | 585 |
| AvaII | GGWCC | 1 cut(s) | 276 |
| BanI | GGYRCC | 1 cut(s) | 68 |
| BbvCI | CCTCAGC | 1 cut(s) | 105 |
| BbvI | GCAGC | 3 cut(s) | 622, 709, 712 |
| BccI | CCATC | 3 cut(s) | 71, 222, 287 |
| BciT130I | CCWGG | 2 cut(s) | 152, 374 |
| BcnI | CCSGG | 3 cut(s) | 206, 317, 422 |
| BcoDI | GTCTC | 2 cut(s) | 386, 480 |
| BfmI | CTRYAG | 1 cut(s) | 409 |
| BglII | AGATCT | 1 cut(s) | 433 |
| BisI | GCNGC | 4 cut(s) | 269, 611, 698, 701 |
| BlpI | GCTNAGC | 1 cut(s) | 17 |
| BlsI | GCNGC | 4 cut(s) | 270, 612, 699, 702 |
| Bme1390I | CCNGG | 5 cut(s) | 152, 206, 317, 374, 422 |
| Bme18I | GGWCC | 1 cut(s) | 276 |
| BmgT120I | GGNCC | 2 cut(s) | 276, 376 |
| BmiI | GGNNCC | 3 cut(s) | 70, 210, 321 |
| BmrFI | CCNGG | 5 cut(s) | 152, 206, 317, 374, 422 |
| BmrI | ACTGGG | 1 cut(s) | 286 |
| BmuI | ACTGGG | 1 cut(s) | 286 |
| BoxI | GACNNNNGTC | 1 cut(s) | 519 |
| Bpu10I | CCTNAGC | 2 cut(s) | 105, 272 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 17 |
| Bpu14I | TTCGAA | 1 cut(s) | 585 |
| BpuEI | CTTGAG | 2 cut(s) | 368, 689 |
| BpuMI | CCSGG | 3 cut(s) | 206, 317, 422 |
| BsaAI | YACGTR | 2 cut(s) | 220, 331 |
| BsaBI | GATNNNNATC | 1 cut(s) | 438 |
| BsaHI | GRCGYC | 1 cut(s) | 362 |
| BsaI | GGTCTC | 1 cut(s) | 480 |
| BsaJI | CCNNGG | 1 cut(s) | 447 |
| BsaWI | WCCGGW | 5 cut(s) | 236, 246, 347, 357, 687 |
| Bse118I | RCCGGY | 1 cut(s) | 687 |
| Bse1I | ACTGG | 2 cut(s) | 127, 292 |
| Bse8I | GATNNNNATC | 1 cut(s) | 438 |
| BseAI | TCCGGA | 2 cut(s) | 246, 357 |
| BseBI | CCWGG | 2 cut(s) | 152, 374 |
| BseDI | CCNNGG | 1 cut(s) | 447 |
| BseGI | GGATG | 1 cut(s) | 439 |
| BseJI | GATNNNNATC | 1 cut(s) | 438 |
| BseMII | CTCAG | 3 cut(s) | 31, 119, 286 |
| BseNI | ACTGG | 2 cut(s) | 127, 292 |
| BseRI | GAGGAG | 1 cut(s) | 391 |
| BseXI | GCAGC | 3 cut(s) | 622, 709, 712 |
| Bsh1236I | CGCG | 2 cut(s) | 484, 665 |
| Bsh1285I | CGRYCG | 2 cut(s) | 237, 447 |
| BshFI | GGCC | 2 cut(s) | 377, 452 |
| BshNI | GGYRCC | 1 cut(s) | 68 |
| BshTI | ACCGGT | 1 cut(s) | 687 |
| BsiEI | CGRYCG | 2 cut(s) | 237, 447 |
| BsiSI | CCGG | 9 cut(s) | 206, 237, 247, 317, 348, 358, 422, 607, 688 |
| BsmAI | GTCTC | 2 cut(s) | 386, 480 |
| BsmBI | CGTCTC | 1 cut(s) | 386 |
| BsnI | GGCC | 2 cut(s) | 377, 452 |
| Bso31I | GGTCTC | 1 cut(s) | 480 |
| Bsp119I | TTCGAA | 1 cut(s) | 585 |
| Bsp13I | TCCGGA | 2 cut(s) | 246, 357 |
| Bsp143I | GATC | 3 cut(s) | 199, 413, 433 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 17 |
| BspACI | CCGC | 4 cut(s) | 88, 140, 268, 567 |
| BspANI | GGCC | 2 cut(s) | 377, 452 |
| BspCNI | CTCAG | 3 cut(s) | 30, 118, 285 |
| BspEI | TCCGGA | 2 cut(s) | 246, 357 |
| BspFNI | CGCG | 2 cut(s) | 484, 665 |
| BspHI | TCATGA | 1 cut(s) | 523 |
| BspLI | GGNNCC | 3 cut(s) | 70, 210, 321 |
| BspPI | GGATC | 1 cut(s) | 408 |
| BspT104I | TTCGAA | 1 cut(s) | 585 |
| BspT107I | GGYRCC | 1 cut(s) | 68 |
| BspTNI | GGTCTC | 1 cut(s) | 480 |
| BsrBI | CCGCTC | 1 cut(s) | 268 |
| BsrFI | RCCGGY | 1 cut(s) | 687 |
| BsrI | ACTGG | 2 cut(s) | 127, 292 |
| BssAI | RCCGGY | 1 cut(s) | 687 |
| BssECI | CCNNGG | 1 cut(s) | 447 |
| BssMI | GATC | 3 cut(s) | 199, 413, 433 |
| BssNI | GRCGYC | 1 cut(s) | 362 |
| Bst2UI | CCWGG | 2 cut(s) | 152, 374 |
| Bst6I | CTCTTC | 1 cut(s) | 47 |
| BstACI | GRCGYC | 1 cut(s) | 362 |
| BstBAI | YACGTR | 2 cut(s) | 220, 331 |
| BstBI | TTCGAA | 1 cut(s) | 585 |
| BstC8I | GCNNGC | 2 cut(s) | 23, 571 |
| BstDEI | CTNAG | 3 cut(s) | 17, 105, 272 |
| BstF5I | GGATG | 1 cut(s) | 439 |
| BstFNI | CGCG | 2 cut(s) | 484, 665 |
| BstKTI | GATC | 3 cut(s) | 202, 416, 436 |
| BstMAI | GTCTC | 2 cut(s) | 386, 480 |
| BstMBI | GATC | 3 cut(s) | 199, 413, 433 |
| BstMCI | CGRYCG | 2 cut(s) | 237, 447 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 22, 724 |
| BstNI | CCWGG | 2 cut(s) | 152, 374 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 519 |
| BstSCI | CCNGG | 5 cut(s) | 150, 204, 315, 372, 420 |
| BstSFI | CTRYAG | 1 cut(s) | 409 |
| BstUI | CGCG | 2 cut(s) | 484, 665 |
| BstV1I | GCAGC | 3 cut(s) | 622, 709, 712 |
| BstX2I | RGATCY | 2 cut(s) | 413, 433 |
| BstYI | RGATCY | 2 cut(s) | 413, 433 |
| BsuRI | GGCC | 2 cut(s) | 377, 452 |
| BtsCI | GGATG | 1 cut(s) | 439 |
| Cac8I | GCNNGC | 2 cut(s) | 23, 571 |
| CciI | TCATGA | 1 cut(s) | 523 |
| Cfr10I | RCCGGY | 1 cut(s) | 687 |
| Cfr13I | GGNCC | 2 cut(s) | 276, 376 |
| CseI | GACGC | 3 cut(s) | 370, 490, 671 |
| Csp6I | GTAC | 1 cut(s) | 295 |
| CspAI | ACCGGT | 1 cut(s) | 687 |
| CviAII | CATG | 3 cut(s) | 13, 262, 524 |
| CviQI | GTAC | 1 cut(s) | 295 |
| DdeI | CTNAG | 3 cut(s) | 17, 105, 272 |
| DpnI | GATC | 3 cut(s) | 201, 415, 435 |
| DpnII | GATC | 3 cut(s) | 199, 413, 433 |
| Eam1104I | CTCTTC | 1 cut(s) | 47 |
| EarI | CTCTTC | 1 cut(s) | 47 |
| EciI | GGCGGA | 1 cut(s) | 556 |
| Eco31I | GGTCTC | 1 cut(s) | 480 |
| Eco47I | GGWCC | 1 cut(s) | 276 |
| Eco57I | CTGAAG | 1 cut(s) | 450 |
| EcoRII | CCWGG | 2 cut(s) | 150, 372 |
| Esp3I | CGTCTC | 1 cut(s) | 386 |
| FaeI | CATG | 3 cut(s) | 16, 265, 527 |
| FaiI | YATR | 5 cut(s) | 14, 263, 492, 494, 525 |
| FatI | CATG | 3 cut(s) | 12, 261, 523 |
| FauNDI | CATATG | 1 cut(s) | 492 |
| FblI | GTMKAC | 1 cut(s) | 136 |
| Fnu4HI | GCNGC | 4 cut(s) | 269, 611, 698, 701 |
| FokI | GGATG | 1 cut(s) | 426 |
| Fsp4HI | GCNGC | 4 cut(s) | 269, 611, 698, 701 |
| GluI | GCNGC | 4 cut(s) | 269, 611, 698, 701 |
| HaeIII | GGCC | 2 cut(s) | 377, 452 |
| HapII | CCGG | 9 cut(s) | 206, 237, 247, 317, 348, 358, 422, 607, 688 |
| HgaI | GACGC | 3 cut(s) | 370, 490, 671 |
| Hin1I | GRCGYC | 1 cut(s) | 362 |
| Hin1II | CATG | 3 cut(s) | 16, 265, 527 |
| HincII | GTYRAC | 1 cut(s) | 661 |
| HindII | GTYRAC | 1 cut(s) | 661 |
| HinfI | GANTC | 3 cut(s) | 250, 582, 722 |
| HpaII | CCGG | 9 cut(s) | 206, 237, 247, 317, 348, 358, 422, 607, 688 |
| HphI | GGTGA | 2 cut(s) | 194, 565 |
| Hpy166II | GTNNAC | 2 cut(s) | 137, 661 |
| Hpy188I | TCNGA | 6 cut(s) | 418, 444, 504, 514, 535, 542 |
| Hpy188III | TCNNGA | 3 cut(s) | 247, 358, 524 |
| Hpy8I | GTNNAC | 2 cut(s) | 137, 661 |
| Hpy99I | CGWCG | 1 cut(s) | 484 |
| HpyAV | CCTTC | 2 cut(s) | 521, 609 |
| HpyCH4IV | ACGT | 3 cut(s) | 157, 219, 330 |
| HpyCH4V | TGCA | 1 cut(s) | 96 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 22, 724 |
| HpyF3I | CTNAG | 3 cut(s) | 17, 105, 272 |
| HpySE526I | ACGT | 3 cut(s) | 157, 219, 330 |
| Hsp92I | GRCGYC | 1 cut(s) | 362 |
| Hsp92II | CATG | 3 cut(s) | 16, 265, 527 |
| Kpn2I | TCCGGA | 2 cut(s) | 246, 357 |
| Kzo9I | GATC | 3 cut(s) | 199, 413, 433 |
| LmnI | GCTCC | 4 cut(s) | 153, 265, 375, 504 |
| Lsp1109I | GCAGC | 3 cut(s) | 622, 709, 712 |
| MaeII | ACGT | 3 cut(s) | 157, 219, 330 |
| MaeIII | GTNAC | 4 cut(s) | 220, 331, 708, 734 |
| MalI | GATC | 3 cut(s) | 201, 415, 435 |
| MbiI | CCGCTC | 1 cut(s) | 268 |
| MboI | GATC | 3 cut(s) | 199, 413, 433 |
| MboII | GAAGA | 6 cut(s) | 34, 40, 428, 443, 599, 665 |
| MflI | RGATCY | 2 cut(s) | 413, 433 |
| MluCI | AATT | 1 cut(s) | 754 |
| MlyI | GAGTC | 2 cut(s) | 244, 716 |
| MmeI | TCCRAC | 6 cut(s) | 217, 328, 441, 467, 492, 565 |
| MroI | TCCGGA | 2 cut(s) | 246, 357 |
| MroXI | GAANNNNTTC | 1 cut(s) | 435 |
| MseI | TTAA | 2 cut(s) | 684, 757 |
| MspA1I | CMGCKG | 1 cut(s) | 21 |
| MspI | CCGG | 9 cut(s) | 206, 237, 247, 317, 348, 358, 422, 607, 688 |
| MspR9I | CCNGG | 5 cut(s) | 152, 206, 317, 374, 422 |
| MvaI | CCWGG | 2 cut(s) | 152, 374 |
| MvnI | CGCG | 2 cut(s) | 484, 665 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 22, 724 |
| NciI | CCSGG | 3 cut(s) | 206, 317, 422 |
| NdeI | CATATG | 1 cut(s) | 492 |
| NdeII | GATC | 3 cut(s) | 199, 413, 433 |
| NlaIII | CATG | 3 cut(s) | 16, 265, 527 |
| NlaIV | GGNNCC | 3 cut(s) | 70, 210, 321 |
| NspV | TTCGAA | 1 cut(s) | 585 |
| PagI | TCATGA | 1 cut(s) | 523 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 72, 230, 591 |
| PdmI | GAANNNNTTC | 1 cut(s) | 435 |
| PfeI | GAWTC | 1 cut(s) | 582 |
| PflFI | GACNNNGTC | 1 cut(s) | 253 |
| PfoI | TCCNGGA | 1 cut(s) | 150 |
| PinAI | ACCGGT | 1 cut(s) | 687 |
| PkrI | GCNGC | 4 cut(s) | 270, 612, 699, 702 |
| PleI | GAGTC | 2 cut(s) | 244, 716 |
| PpsI | GAGTC | 2 cut(s) | 244, 716 |
| Ppu21I | YACGTR | 2 cut(s) | 220, 331 |
| PshAI | GACNNNNGTC | 1 cut(s) | 519 |
| Psp6I | CCWGG | 2 cut(s) | 150, 372 |
| PspGI | CCWGG | 2 cut(s) | 150, 372 |
| PspN4I | GGNNCC | 3 cut(s) | 70, 210, 321 |
| PspPI | GGNCC | 2 cut(s) | 276, 376 |
| PsuI | RGATCY | 2 cut(s) | 413, 433 |
| PsyI | GACNNNGTC | 1 cut(s) | 253 |
| PvuII | CAGCTG | 1 cut(s) | 21 |
| RsaI | GTAC | 1 cut(s) | 296 |
| RsaNI | GTAC | 1 cut(s) | 295 |
| SaqAI | TTAA | 2 cut(s) | 684, 757 |
| SatI | GCNGC | 4 cut(s) | 269, 611, 698, 701 |
| Sau3AI | GATC | 3 cut(s) | 199, 413, 433 |
| Sau96I | GGNCC | 2 cut(s) | 276, 376 |
| SchI | GAGTC | 2 cut(s) | 244, 716 |
| ScrFI | CCNGG | 5 cut(s) | 152, 206, 317, 374, 422 |
| SfcI | CTRYAG | 1 cut(s) | 409 |
| SfuI | TTCGAA | 1 cut(s) | 585 |
| SinI | GGWCC | 1 cut(s) | 276 |
| SmlI | CTYRAG | 2 cut(s) | 383, 704 |
| SmoI | CTYRAG | 2 cut(s) | 383, 704 |
| Sse9I | AATT | 1 cut(s) | 754 |
| SsiI | CCGC | 4 cut(s) | 88, 140, 268, 567 |
| StyD4I | CCNGG | 5 cut(s) | 150, 204, 315, 372, 420 |
| TaiI | ACGT | 3 cut(s) | 160, 222, 333 |
| TaqI | TCGA | 3 cut(s) | 171, 585, 720 |
| TaqII | GACCGA | 1 cut(s) | 461 |
| TasI | AATT | 1 cut(s) | 754 |
| TauI | GCSGC | 1 cut(s) | 271 |
| TfiI | GAWTC | 1 cut(s) | 582 |
| Tru1I | TTAA | 2 cut(s) | 684, 757 |
| Tru9I | TTAA | 2 cut(s) | 684, 757 |
| TseI | GCWGC | 3 cut(s) | 610, 697, 700 |
| TspDTI | ATGAA | 7 cut(s) | 34, 250, 428, 488, 540, 666, 670 |
| TspGWI | ACGGA | 2 cut(s) | 239, 243 |
| Tth111I | GACNNNGTC | 1 cut(s) | 253 |
| VpaK11BI | GGWCC | 1 cut(s) | 276 |
| XmiI | GTMKAC | 1 cut(s) | 136 |
| XmnI | GAANNNNTTC | 1 cut(s) | 435 |