No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr4g0406751 |
| rosa_laevigata | RLG00000000934 RLG00000011018 RLG00000017602 RLG00000018634 |
| rosa_multiflora | Rmu_sc0002302.1_g000003 Rmu_sc0002718.1_g000040 Rmu_ssc0000174.1_g000026 |
| rosa_rugosa | Rorug07G0098700 |
| rosa_samantha | Rh2AG218800 Rh2AG478500 Rh2CG220500 Rh2CG464700 Rh2DG224700 Rh3CG286800 Rh3CG326200 Rh5CG443900 Rh5DG264700 Rh5DG264800 Rh7DG256000 |
| rosa_wichuraiana | Rw6G024920 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 34 |
| AfaI | GTAC | 2 cut(s) | 150, 323 |
| AgsI | TTSAA | 1 cut(s) | 425 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 233 |
| AluBI | AGCT | 2 cut(s) | 137, 198 |
| AluI | AGCT | 2 cut(s) | 137, 198 |
| ApeKI | GCWGC | 1 cut(s) | 69 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 207 |
| AsuHPI | GGTGA | 2 cut(s) | 229, 263 |
| BbvI | GCAGC | 1 cut(s) | 56 |
| BccI | CCATC | 3 cut(s) | 139, 162, 309 |
| BglII | AGATCT | 1 cut(s) | 277 |
| BisI | GCNGC | 1 cut(s) | 70 |
| BlsI | GCNGC | 1 cut(s) | 71 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 233 |
| BmsI | GCATC | 2 cut(s) | 54, 484 |
| Bse3DI | GCAATG | 1 cut(s) | 253 |
| BseMI | GCAATG | 1 cut(s) | 253 |
| BseXI | GCAGC | 1 cut(s) | 56 |
| BseYI | CCCAGC | 1 cut(s) | 198 |
| Bsh1236I | CGCG | 1 cut(s) | 34 |
| BslFI | GGGAC | 1 cut(s) | 370 |
| BsmFI | GGGAC | 1 cut(s) | 370 |
| Bsp143I | GATC | 1 cut(s) | 277 |
| BspFNI | CGCG | 1 cut(s) | 34 |
| BspQI | GCTCTTC | 1 cut(s) | 236 |
| BsrDI | GCAATG | 1 cut(s) | 253 |
| BssMI | GATC | 1 cut(s) | 277 |
| Bst6I | CTCTTC | 1 cut(s) | 236 |
| BstFNI | CGCG | 1 cut(s) | 34 |
| BstKTI | GATC | 1 cut(s) | 280 |
| BstMBI | GATC | 1 cut(s) | 277 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 106 |
| BstNSI | RCATGY | 1 cut(s) | 463 |
| BstUI | CGCG | 1 cut(s) | 34 |
| BstV1I | GCAGC | 1 cut(s) | 56 |
| BstX2I | RGATCY | 1 cut(s) | 277 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 415 |
| BstYI | RGATCY | 1 cut(s) | 277 |
| BtgZI | GCGATG | 1 cut(s) | 31 |
| Csp6I | GTAC | 2 cut(s) | 149, 322 |
| CviAII | CATG | 1 cut(s) | 460 |
| CviJI | RGCY | 4 cut(s) | 137, 198, 208, 349 |
| CviKI_1 | RGCY | 4 cut(s) | 137, 198, 208, 349 |
| CviQI | GTAC | 2 cut(s) | 149, 322 |
| DpnI | GATC | 1 cut(s) | 279 |
| DpnII | GATC | 1 cut(s) | 277 |
| DriI | GACNNNNNGTC | 1 cut(s) | 233 |
| Eam1104I | CTCTTC | 1 cut(s) | 236 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 233 |
| EarI | CTCTTC | 1 cut(s) | 236 |
| EcoT22I | ATGCAT | 1 cut(s) | 477 |
| FaeI | CATG | 1 cut(s) | 463 |
| FaqI | GGGAC | 1 cut(s) | 370 |
| FatI | CATG | 1 cut(s) | 459 |
| Fnu4HI | GCNGC | 1 cut(s) | 70 |
| Fsp4HI | GCNGC | 1 cut(s) | 70 |
| GluI | GCNGC | 1 cut(s) | 70 |
| GsaI | CCCAGC | 1 cut(s) | 202 |
| Hin1II | CATG | 1 cut(s) | 463 |
| HinfI | GANTC | 3 cut(s) | 4, 59, 220 |
| HphI | GGTGA | 2 cut(s) | 229, 263 |
| Hpy166II | GTNNAC | 2 cut(s) | 122, 324 |
| Hpy188I | TCNGA | 3 cut(s) | 282, 296, 480 |
| Hpy188III | TCNNGA | 1 cut(s) | 238 |
| Hpy8I | GTNNAC | 2 cut(s) | 122, 324 |
| HpyAV | CCTTC | 1 cut(s) | 197 |
| HpyCH4IV | ACGT | 1 cut(s) | 151 |
| HpyCH4V | TGCA | 3 cut(s) | 430, 463, 475 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 106 |
| HpySE526I | ACGT | 1 cut(s) | 151 |
| Hsp92II | CATG | 1 cut(s) | 463 |
| Kzo9I | GATC | 1 cut(s) | 277 |
| LguI | GCTCTTC | 1 cut(s) | 236 |
| LmnI | GCTCC | 1 cut(s) | 42 |
| LpnPI | CCDG | 3 cut(s) | 147, 184, 354 |
| Lsp1109I | GCAGC | 1 cut(s) | 56 |
| LweI | GCATC | 2 cut(s) | 54, 484 |
| MaeII | ACGT | 1 cut(s) | 151 |
| MaeIII | GTNAC | 1 cut(s) | 391 |
| MalI | GATC | 1 cut(s) | 279 |
| MboI | GATC | 1 cut(s) | 277 |
| MboII | GAAGA | 1 cut(s) | 253 |
| MflI | RGATCY | 1 cut(s) | 277 |
| MluCI | AATT | 1 cut(s) | 91 |
| MlyI | GAGTC | 1 cut(s) | 53 |
| MnlI | CCTC | 2 cut(s) | 338, 374 |
| Mph1103I | ATGCAT | 1 cut(s) | 477 |
| MroXI | GAANNNNTTC | 1 cut(s) | 207 |
| MseI | TTAA | 3 cut(s) | 179, 362, 487 |
| MslI | CAYNNNNRTG | 1 cut(s) | 413 |
| MspA1I | CMGCKG | 1 cut(s) | 137 |
| MvnI | CGCG | 1 cut(s) | 34 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 106 |
| NdeII | GATC | 1 cut(s) | 277 |
| NlaIII | CATG | 1 cut(s) | 463 |
| NsiI | ATGCAT | 1 cut(s) | 477 |
| NspI | RCATGY | 1 cut(s) | 463 |
| PciSI | GCTCTTC | 1 cut(s) | 236 |
| PdmI | GAANNNNTTC | 1 cut(s) | 207 |
| PfeI | GAWTC | 2 cut(s) | 4, 220 |
| PkrI | GCNGC | 1 cut(s) | 71 |
| PleI | GAGTC | 1 cut(s) | 53 |
| PpsI | GAGTC | 1 cut(s) | 53 |
| PspFI | CCCAGC | 1 cut(s) | 198 |
| PsuI | RGATCY | 1 cut(s) | 277 |
| PvuII | CAGCTG | 1 cut(s) | 137 |
| RsaI | GTAC | 2 cut(s) | 150, 323 |
| RsaNI | GTAC | 2 cut(s) | 149, 322 |
| RseI | CAYNNNNRTG | 1 cut(s) | 413 |
| SapI | GCTCTTC | 1 cut(s) | 236 |
| SaqAI | TTAA | 3 cut(s) | 179, 362, 487 |
| SatI | GCNGC | 1 cut(s) | 70 |
| Sau3AI | GATC | 1 cut(s) | 277 |
| SchI | GAGTC | 1 cut(s) | 53 |
| SetI | ASST | 5 cut(s) | 139, 154, 166, 200, 385 |
| SfaNI | GCATC | 2 cut(s) | 54, 484 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 413 |
| Sse9I | AATT | 1 cut(s) | 91 |
| TaiI | ACGT | 1 cut(s) | 154 |
| TaqI | TCGA | 1 cut(s) | 237 |
| TasI | AATT | 1 cut(s) | 91 |
| TatI | WGTACW | 1 cut(s) | 321 |
| TfiI | GAWTC | 2 cut(s) | 4, 220 |
| Tru1I | TTAA | 3 cut(s) | 179, 362, 487 |
| Tru9I | TTAA | 3 cut(s) | 179, 362, 487 |
| TseI | GCWGC | 1 cut(s) | 69 |
| TspDTI | ATGAA | 3 cut(s) | 17, 27, 200 |
| XceI | RCATGY | 1 cut(s) | 463 |
| XmnI | GAANNNNTTC | 1 cut(s) | 207 |
| Zsp2I | ATGCAT | 1 cut(s) | 477 |