HB1, ASXL, restriction endonuclease HTH domain
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr4g0406751 |
| rosa_laevigata | RLG00000000934 RLG00000011018 RLG00000017602 RLG00000018634 |
| rosa_multiflora | Rmu_sc0002302.1_g000003 Rmu_sc0002718.1_g000040 Rmu_ssc0000174.1_g000026 |
| rosa_rugosa | Rorug07G0098700 |
| rosa_samantha | Rh2AG218800 Rh2AG478500 Rh2CG220500 Rh2CG464700 Rh2DG224700 Rh3CG286800 Rh3CG326200 Rh5CG443900 Rh5DG264700 Rh5DG264800 Rh7DG256000 |
| rosa_wichuraiana | Rw6G024920 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcoI | YGGCCR | 1 cut(s) | 121 |
| AcsI | RAATTY | 1 cut(s) | 179 |
| AcuI | CTGAAG | 1 cut(s) | 180 |
| AluBI | AGCT | 1 cut(s) | 149 |
| AluI | AGCT | 1 cut(s) | 149 |
| Alw26I | GTCTC | 1 cut(s) | 147 |
| AoxI | GGCC | 1 cut(s) | 121 |
| ApoI | RAATTY | 1 cut(s) | 179 |
| BalI | TGGCCA | 1 cut(s) | 123 |
| BccI | CCATC | 1 cut(s) | 132 |
| BciVI | GTATCC | 1 cut(s) | 60 |
| BcoDI | GTCTC | 1 cut(s) | 147 |
| BfaI | CTAG | 2 cut(s) | 24, 138 |
| BfuI | GTATCC | 1 cut(s) | 60 |
| BpmI | CTGGAG | 1 cut(s) | 171 |
| BsaJI | CCNNGG | 1 cut(s) | 62 |
| BseDI | CCNNGG | 1 cut(s) | 62 |
| BseGI | GGATG | 1 cut(s) | 16 |
| BshFI | GGCC | 1 cut(s) | 123 |
| BsmAI | GTCTC | 1 cut(s) | 147 |
| BsnI | GGCC | 1 cut(s) | 123 |
| Bsp19I | CCATGG | 1 cut(s) | 62 |
| BspANI | GGCC | 1 cut(s) | 123 |
| BssECI | CCNNGG | 1 cut(s) | 62 |
| BssT1I | CCWWGG | 1 cut(s) | 62 |
| Bst4CI | ACNGT | 1 cut(s) | 82 |
| BstDEI | CTNAG | 1 cut(s) | 95 |
| BstDSI | CCRYGG | 1 cut(s) | 62 |
| BstF5I | GGATG | 1 cut(s) | 16 |
| BstMAI | GTCTC | 1 cut(s) | 147 |
| BstNSI | RCATGY | 1 cut(s) | 137 |
| BsuI | GTATCC | 1 cut(s) | 60 |
| BsuRI | GGCC | 1 cut(s) | 123 |
| BtgI | CCRYGG | 1 cut(s) | 62 |
| BtsCI | GGATG | 1 cut(s) | 16 |
| CviAII | CATG | 3 cut(s) | 63, 103, 134 |
| CviJI | RGCY | 4 cut(s) | 92, 100, 123, 149 |
| CviKI_1 | RGCY | 4 cut(s) | 92, 100, 123, 149 |
| DdeI | CTNAG | 1 cut(s) | 95 |
| EaeI | YGGCCR | 1 cut(s) | 121 |
| Eco130I | CCWWGG | 1 cut(s) | 62 |
| Eco57I | CTGAAG | 1 cut(s) | 180 |
| EcoT14I | CCWWGG | 1 cut(s) | 62 |
| ErhI | CCWWGG | 1 cut(s) | 62 |
| FaeI | CATG | 3 cut(s) | 66, 106, 137 |
| FaiI | YATR | 6 cut(s) | 64, 104, 116, 118, 135, 186 |
| FatI | CATG | 3 cut(s) | 62, 102, 133 |
| FokI | GGATG | 1 cut(s) | 23 |
| FspBI | CTAG | 2 cut(s) | 24, 138 |
| GsuI | CTGGAG | 1 cut(s) | 171 |
| HaeIII | GGCC | 1 cut(s) | 123 |
| Hin1II | CATG | 3 cut(s) | 66, 106, 137 |
| HinfI | GANTC | 2 cut(s) | 155, 171 |
| Hpy166II | GTNNAC | 1 cut(s) | 131 |
| Hpy188I | TCNGA | 1 cut(s) | 160 |
| Hpy188III | TCNNGA | 1 cut(s) | 41 |
| Hpy8I | GTNNAC | 1 cut(s) | 131 |
| HpyCH4III | ACNGT | 1 cut(s) | 82 |
| HpyF3I | CTNAG | 1 cut(s) | 95 |
| Hsp92II | CATG | 3 cut(s) | 66, 106, 137 |
| LpnPI | CCDG | 3 cut(s) | 54, 135, 160 |
| MaeI | CTAG | 2 cut(s) | 24, 138 |
| MaeIII | GTNAC | 1 cut(s) | 19 |
| MboII | GAAGA | 2 cut(s) | 155, 173 |
| MlsI | TGGCCA | 1 cut(s) | 123 |
| MluCI | AATT | 2 cut(s) | 28, 179 |
| MluNI | TGGCCA | 1 cut(s) | 123 |
| MlyI | GAGTC | 1 cut(s) | 149 |
| Mox20I | TGGCCA | 1 cut(s) | 123 |
| MscI | TGGCCA | 1 cut(s) | 123 |
| Msp20I | TGGCCA | 1 cut(s) | 123 |
| NcoI | CCATGG | 1 cut(s) | 62 |
| NlaIII | CATG | 3 cut(s) | 66, 106, 137 |
| NspI | RCATGY | 1 cut(s) | 137 |
| PfeI | GAWTC | 1 cut(s) | 171 |
| PleI | GAGTC | 1 cut(s) | 149 |
| PpsI | GAGTC | 1 cut(s) | 149 |
| SchI | GAGTC | 1 cut(s) | 149 |
| SetI | ASST | 1 cut(s) | 151 |
| Sse9I | AATT | 2 cut(s) | 28, 179 |
| SspMI | CTAG | 2 cut(s) | 24, 138 |
| StyI | CCWWGG | 1 cut(s) | 62 |
| TaaI | ACNGT | 1 cut(s) | 82 |
| TaqI | TCGA | 1 cut(s) | 189 |
| TasI | AATT | 2 cut(s) | 28, 179 |
| TfiI | GAWTC | 1 cut(s) | 171 |
| TspDTI | ATGAA | 1 cut(s) | 17 |
| XapI | RAATTY | 1 cut(s) | 179 |
| XceI | RCATGY | 1 cut(s) | 137 |
| XspI | CTAG | 2 cut(s) | 24, 138 |