Rorug07G0098700

Belongs to the mitochondrial carrier (TC 2.A.29) family

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
Physical Location & Seq
Reverse (-)
7780912 .. 7786035
5124 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0098700.1

Sequence Viewer

Length: 1605 bp
ATGGCGTCCGAAGCCCTAGAGGAGAAGAAGCCGGAAGAAGAAGCTCCTGTTGAGGATAAACAGGAGGTTGAAGCTGAAGAGGACGAAGAGAAAGAGGATCTGCCGGAAGTGCCCGAGAAGGCGACGGAGAACGAGGAAGGCGAAGAAACTCCCAAGAAAGGTAAGCGGACTCGGAGAGCCAGCTCGAAGAGCCAGACTGAGTCGAAGAAGCAGCGAGGCGGAGACTCAGCTGTGAAGAACCCGAAGAAGGAAGCCGAGGTGGAAAAGAAGGAGAAGGAGCCGGTTACTCCGGTGAGTGAGAGGCCTACTAGGGAGAGGAAAGTAGTTGAGAGATACTCAGCTCCCGAGAGTGGAAGGTCTTCGGCGACGAAACCATTGAACATTGAGAAGGGTCGTGGAACTCAGCTCAAGGATATTCCAAACGTGGCTTTCAAGTTATCGAAGAGAAAACCGGATGACAATCTTCAATTACTGCACACAATTCTTTTTGGGAAGAAAGCAAAGTCTCACAGTTTAAAGAGAAACATTGTCCAGTTTTCAGGTTATGTGTGGGCTGAGAATGAGCAAGAAAAACAGAGGACAAGGGTAAAGGAGAAGCTTGATAAGTGTGTTAAAGAAAAGTTAATGGATTTTTGTGACGTGCTTAATATTCAAATCAATAAAGCTGGCACAAAGAAGGAAGAACTTTCTGCAAAGTTATTGGAGTTCTTGGAATCCCCACATGCTACAACTGATGTTTTGCTTGCTGAAAAGGAACAGAAAGGGCAAAAGCGCAAGAAGAAGGTTACACCAAGTAAGATTGCAGGTTCTGGAGAAGGATCACCGGAAACTCCAGCCAAGAAACTAAAGGACACACCCAGTGTTGAAAAGAATGAAGAGTCAACCAAAGATGAAGAGGACGAATTTGATGATAAAGTTGAACCTTCTGAAGAAGATGATGATGACAGGATGAATGAAGAAACTGATCATGGGGATAAATCTGATGAAGAGGAAGATGAACCAAAGGACCAGGTGTCAAGTCCAAAAAGTTCATCCAAAGATGTGAAGGAGGGCTCAAAGGTTAAAACTGGGGGGAAGTCAACACCAGCTAAGAAGAAAACCCCTGCAAAATCTGTGAAAACTTCTACAGAGTCTGAAAAGAAATCTCGTTCTACTTCAAAAAGAGGTGCAAGTGATGCTGATGGAGCTTCTGGTTCTAAAGCAAAGGGATCTGTGAAAAAACAGAAAACTGAAAAGGAAAGCCCAAAGGATAGTAAGGCAAAAACCACTAGCAAAAAACAGTCGAGCAAGTCCCCAGCCAAGGTTCCAGCAAAGGATCAAGTGAAAGGCAAAACTAGCAAGAAGGCAAAGACAGAGCCCACAAAAGAAGATGTGCATGCTGTAATTGTTGACATTCTGAAGGAAGTGGACTTCAATACTGCAACTTTATCTGATATTCTCAGGCAACTTGGTACCCACTTTGGTATTGATTTAATGCATAGAAAAGCGGAGGTGAAGGACATAATTACGGATGTAATTAATAACATGACTGATGAGGAAGAAGAGGATGAAGAAGAGGAAGCAGCTGGTGATGATTCAGAGAAAGAGGACCATGATGATGCTTAG

Protein Analysis

534

Amino Acids

59.44

Weight (kDa)

5.6

Isoelectric Point (pI)

55.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DEK_C PF08766 453 - 505 4.2e-14 DEK C terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000028)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g45420 FvH4_4g14031 FvH4_5g20780 FvH4_6g28530 FvH4_7g14020 FvH4_7g14030 FvH4_7g14040 FvH4_7g14050 FvH4_7g14060 FvH4_7g14070 FvH4_7g14090 FvH4_7g14110 FvH4_7g14140 FvH4_7g14450
malus_domestica MD00G1189100.v1.1 MD01G1018600.v1.1 MD01G1053800.v1.1 MD01G1053900.v1.1 MD01G1054000.v1.1 MD01G1054100.v1.1 MD01G1056700.v1.1 MD01G1057000.v1.1 MD01G1057300.v1.1 MD01G1057400.v1.1 MD01G1061600.v1.1 MD01G1061800.v1.1 MD01G1061900.v1.1 MD01G1062000.v1.1 MD01G1062400.v1.1 MD01G1062500.v1.1 MD01G1063200.v1.1 MD01G1063300.v1.1 MD01G1063400.v1.1 MD01G1063700.v1.1 MD01G1063900.v1.1 MD01G1064200.v1.1 MD01G1064300.v1.1 MD01G1064400.v1.1 MD01G1064600.v1.1 MD01G1064700.v1.1 MD01G1181100.v1.1 MD01G1212300.v1.1 MD01G1212500.v1.1 MD01G1212600.v1.1 MD02G1271900.v1.1 MD07G1136500.v1.1 MD07G1139300.v1.1 MD07G1141200.v1.1 MD07G1144700.v1.1 MD08G1144200.v1.1 MD14G1186300.v1.1 MD14G1186500.v1.1 MD14G1186700.v1.1 MD14G1186800.v1.1 MD15G1351300.v1.1 MD15G1439500.v1.1
prunus_persica Prupe.1G067000_v2.0.a1 Prupe.2G077400_v2.0.a1 Prupe.2G077700_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078600_v2.0.a1 Prupe.2G078800_v2.0.a1 Prupe.2G099600_v2.0.a1 Prupe.2G099700_v2.0.a1 Prupe.2G155100_v2.0.a1 Prupe.2G155500_v2.0.a1 Prupe.2G155600_v2.0.a1 Prupe.2G155800_v2.0.a1 Prupe.2G155900_v2.0.a1 Prupe.2G156100_v2.0.a1 Prupe.2G166100_v2.0.a1 Prupe.2G166300_v2.0.a1 Prupe.2G167500_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G168400_v2.0.a1 Prupe.2G168700_v2.0.a1 Prupe.2G168800_v2.0.a1 Prupe.2G169000_v2.0.a1 Prupe.2G169100_v2.0.a1 Prupe.2G169200_v2.0.a1 Prupe.2G169500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G172300_v2.0.a1 Prupe.2G304800_v2.0.a1 Prupe.4G264800_v2.0.a1 Prupe.4G265000_v2.0.a1 Prupe.5G051900_v2.0.a1 Prupe.5G052000_v2.0.a1
pyrus_communis pycom01g08380 pycom01g08430 pycom01g08490 pycom01g08520 pycom01g08540 pycom01g08550 pycom01g08600 pycom01g08630 pycom01g08660 pycom01g08720 pycom01g09180 pycom01g09200 pycom01g09210 pycom01g09270 pycom01g09280 pycom01g09300 pycom01g09380 pycom01g19110 pycom01g22260 pycom01g22310 pycom01g22330 pycom01g22350 pycom01g22360 pycom02g23250 pycom07g13420 pycom07g13670 pycom07g13900 pycom07g13910 pycom07g13960 pycom07g13970 pycom07g25680 pycom11g22830
rosa_chinensis RchiOBHm_Chr0c22g0500431 RchiOBHm_Chr0c22g0500441 RchiOBHm_Chr0c22g0500561 RchiOBHm_Chr0c22g0500571 RchiOBHm_Chr0c22g0500611 RchiOBHm_Chr0c22g0500621 RchiOBHm_Chr0c22g0500631 RchiOBHm_Chr0c22g0500681 RchiOBHm_Chr1g0348221 RchiOBHm_Chr1g0348251 RchiOBHm_Chr1g0352861 RchiOBHm_Chr1g0352871 RchiOBHm_Chr1g0352891 RchiOBHm_Chr1g0352901 RchiOBHm_Chr1g0354671 RchiOBHm_Chr1g0354701 RchiOBHm_Chr1g0354711 RchiOBHm_Chr1g0354751 RchiOBHm_Chr1g0354761 RchiOBHm_Chr1g0354841 RchiOBHm_Chr1g0354851 RchiOBHm_Chr1g0354881 RchiOBHm_Chr1g0354971 RchiOBHm_Chr1g0354981 RchiOBHm_Chr1g0354991 RchiOBHm_Chr1g0355001 RchiOBHm_Chr1g0355011 RchiOBHm_Chr1g0355021 RchiOBHm_Chr1g0355861 RchiOBHm_Chr1g0379671 RchiOBHm_Chr1g0379681 RchiOBHm_Chr2g0096591 RchiOBHm_Chr2g0132821 RchiOBHm_Chr3g0454901 RchiOBHm_Chr3g0472711 RchiOBHm_Chr4g0400791 RchiOBHm_Chr5g0069481 RchiOBHm_Chr5g0069511 RchiOBHm_Chr5g0069551 RchiOBHm_Chr6g0254651 RchiOBHm_Chr6g0259721 RchiOBHm_Chr7g0205911 RchiOBHm_Chr7g0206401 RchiOBHm_Chr7g0206571 RchiOBHm_Chr7g0206581 RchiOBHm_Chr7g0206621 RchiOBHm_Chr7g0206631 RchiOBHm_Chr7g0206641 RchiOBHm_Chr7g0206681 RchiOBHm_Chr7g0206691 RchiOBHm_Chr7g0206751 RchiOBHm_Chr7g0206761 RchiOBHm_Chr7g0206851 RchiOBHm_Chr7g0206911 RchiOBHm_Chr7g0206921 RchiOBHm_Chr7g0207001 RchiOBHm_Chr7g0207011 RchiOBHm_Chr7g0207031 RchiOBHm_Chr7g0207101 RchiOBHm_Chr7g0207161 RchiOBHm_Chr7g0207201 RchiOBHm_Chr7g0207271 RchiOBHm_Chr7g0207301 RchiOBHm_Chr7g0207311 RchiOBHm_Chr7g0207421 RchiOBHm_Chr7g0207481 RchiOBHm_Chr7g0207491 RchiOBHm_Chr7g0207501 RchiOBHm_Chr7g0207521 RchiOBHm_Chr7g0207531 RchiOBHm_Chr7g0207561 RchiOBHm_Chr7g0207571 RchiOBHm_Chr7g0207581 RchiOBHm_Chr7g0207601 RchiOBHm_Chr7g0207621 RchiOBHm_Chr7g0207631 RchiOBHm_Chr7g0207651 RchiOBHm_Chr7g0207661 RchiOBHm_Chr7g0207711 RchiOBHm_Chr7g0207761 RchiOBHm_Chr7g0207801 RchiOBHm_Chr7g0208821 RchiOBHm_Chr7g0208831 RchiOBHm_Chr7g0208841 RchiOBHm_Chr7g0213601 RchiOBHm_Chr7g0215981 RchiOBHm_Chr7g0216021
rosa_laevigata RLG00000003193 RLG00000003194 RLG00000003287 RLG00000003288 RLG00000003289 RLG00000003293 RLG00000003294 RLG00000003295 RLG00000003297 RLG00000003299 RLG00000003301 RLG00000003327 RLG00000003347 RLG00000016653 RLG00000018642 RLG00000018643 RLG00000019285 RLG00000022542 RLG00000026368 RLG00000026371 RLG00000028124 RLG00000028125 RLG00000028183 RLG00000028184 RLG00000028185 RLG00000028188 RLG00000028673 RLG00000029267 RLG00000029325 RLG00000029674 RLG00000032883 RLG00000036055 RLG00000036058 RLG00000036065 RLG00000036068 RLG00000036071 RLG00000036072 RLG00000036075 RLG00000036076
rosa_multiflora Rmu_co8250183.1_g000001 Rmu_co8271981.1_g000001 Rmu_co8410829.1_g000001 Rmu_co8432879.1_g000001 Rmu_co8441941.1_g000001 Rmu_sc0000076.1_g000031 Rmu_sc0000738.1_g000038 Rmu_sc0000848.1_g000003 Rmu_sc0000848.1_g000014 Rmu_sc0000848.1_g000015 Rmu_sc0000848.1_g000016 Rmu_sc0001264.1_g000001 Rmu_sc0002284.1_g000018 Rmu_sc0002356.1_g000011 Rmu_sc0003020.1_g000003 Rmu_sc0003115.1_g000001 Rmu_sc0003115.1_g000002 Rmu_sc0003115.1_g000003 Rmu_sc0003115.1_g000004 Rmu_sc0003115.1_g000005 Rmu_sc0003115.1_g000008 Rmu_sc0003115.1_g000010 Rmu_sc0003115.1_g000011 Rmu_sc0003115.1_g000014 Rmu_sc0003565.1_g000002 Rmu_sc0003652.1_g000013 Rmu_sc0003652.1_g000015 Rmu_sc0003652.1_g000016 Rmu_sc0003652.1_g000019 Rmu_sc0003940.1_g000001 Rmu_sc0003940.1_g000004 Rmu_sc0003940.1_g000009 Rmu_sc0004084.1_g000010 Rmu_sc0004705.1_g000021 Rmu_sc0004972.1_g000007 Rmu_sc0004987.1_g000002 Rmu_sc0004987.1_g000006 Rmu_sc0005065.1_g000018 Rmu_sc0005065.1_g000029 Rmu_sc0005391.1_g000002 Rmu_sc0005633.1_g000003 Rmu_sc0005633.1_g000008 Rmu_sc0006632.1_g000014 Rmu_sc0006632.1_g000018 Rmu_sc0006681.1_g000010 Rmu_sc0006681.1_g000011 Rmu_sc0006733.1_g000003 Rmu_sc0007385.1_g000005 Rmu_sc0007385.1_g000007 Rmu_sc0007385.1_g000009 Rmu_sc0007385.1_g000016 Rmu_sc0007645.1_g000002 Rmu_sc0007645.1_g000003 Rmu_sc0007645.1_g000022 Rmu_sc0007828.1_g000008 Rmu_sc0008509.1_g000003 Rmu_sc0008509.1_g000015 Rmu_sc0008509.1_g000016 Rmu_sc0008509.1_g000020 Rmu_sc0008509.1_g000030 Rmu_sc0008509.1_g000041 Rmu_sc0008756.1_g000001 Rmu_sc0008756.1_g000003 Rmu_sc0013028.1_g000002 Rmu_sc0013028.1_g000003 Rmu_sc0013028.1_g000005 Rmu_sc0013160.1_g000001 Rmu_sc0014454.1_g000009 Rmu_sc0014455.1_g000007 Rmu_sc0014659.1_g000004 Rmu_sc0017798.1_g000002 Rmu_sc0017798.1_g000004 Rmu_sc0029608.1_g000001 Rmu_sc0037861.1_g000001 Rmu_sc0038750.1_g000001 Rmu_sc0042995.1_g000001 Rmu_ssc0000161.1_g000017
rosa_roxburghii Rroxscaffold_1G00009180 Rroxscaffold_1G00009190 Rroxscaffold_1G00011450 Rroxscaffold_1G00011480 Rroxscaffold_2G00111660 Rroxscaffold_2G00113570 Rroxscaffold_2G00122140 Rroxscaffold_3G00243730 Rroxscaffold_3G00245750 Rroxscaffold_3G00245760 Rroxscaffold_3G00250220 Rroxscaffold_3G00251160 Rroxscaffold_3G00251270 Rroxscaffold_3G00251280 Rroxscaffold_3G00251300 Rroxscaffold_3G00251340 Rroxscaffold_3G00251350 Rroxscaffold_3G00251390 Rroxscaffold_3G00251400 Rroxscaffold_3G00251560 Rroxscaffold_3G00251570 Rroxscaffold_3G00251870 Rroxscaffold_3G00252200 Rroxscaffold_3G00252210 Rroxscaffold_4G00279970 Rroxscaffold_4G00299970 Rroxscaffold_4G00300760 Rroxscaffold_4G00300780 Rroxscaffold_4G00300810 Rroxscaffold_4G00300850 Rroxscaffold_4G00307080 Rroxscaffold_4G00307100 Rroxscaffold_4G00313990 Rroxscaffold_6G00405080
rosa_rugosa Rorug01G0193600 Rorug01G0193700 Rorug01G0243800 Rorug01G0244000 Rorug01G0244000 Rorug01G0244400 Rorug01G0414300.1 Rorug01G0414500 Rorug01G0414600 Rorug02G0235600 Rorug02G0307900 Rorug02G0583100 Rorug02G0583200 Rorug02G0583300 Rorug05G0398000 Rorug05G0398100 Rorug05G0398200 Rorug05G0580300 Rorug05G0590300 Rorug06G0116000 Rorug06G0116100 Rorug07G0096800 Rorug07G0097100.1 Rorug07G0097200 Rorug07G0098600 Rorug07G0098600 Rorug07G0098700 Rorug07G0099100 Rorug07G0106100 Rorug07G0106200 Rorug07G0106200 Rorug07G0106300 Rorug07G0157600 Rorug07G0157700 Rorug07G0157700 Rorug07G0157800
rosa_samantha Rh1AG255500 Rh1AG256700 Rh1BG225800 Rh1BG226200 Rh1BG230000 Rh1CG195300 Rh1CG238400 Rh1CG238500 Rh1CG238900 Rh1CG239000 Rh1CG239300 Rh1CG239400 Rh1CG239800 Rh1CG240000 Rh1CG240200 Rh1CG240300 Rh1CG244300 Rh1CG406900 Rh1CG407300 Rh1CG407400 Rh2CG343600 Rh2DG383200 Rh3BG205900 Rh4AG404400 Rh4BG415500 Rh5AG455200 Rh5AG455600 Rh5CG497000 Rh5CG497200 Rh7AG228800 Rh7AG230400 Rh7AG230800 Rh7AG231200 Rh7AG231600 Rh7AG231800 Rh7AG232100 Rh7AG241600 Rh7BG236200 Rh7CG238200 Rh7CG239100 Rh7CG243400 Rh7CG244900
rosa_wichuraiana Rw0G023040 Rw1G017780 Rw1G022320 Rw1G022340 Rw1G022410 Rw1G022420 Rw1G022440 Rw1G022460 Rw1G022490 Rw1G022500 Rw1G022530 Rw1G022550 Rw1G022560 Rw1G022600 Rw1G023060 Rw1G038150 Rw1G038160 Rw2G008210 Rw2G022350 Rw2G029290 Rw4G015050 Rw4G019850 Rw5G024060 Rw5G042460 Rw7G019160 Rw7G019460 Rw7G019690 Rw7G019830 Rw7G019860 Rw7G019880 Rw7G019890 Rw7G019930 Rw7G019990 Rw7G020460 Rw7G025100 Rw7G025120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 794
Acc65I GGTACC 1 cut(s) 1451
AccB1I GGYRCC 1 cut(s) 1451
AciI CCGC 3 cut(s) 166, 219, 1487
AclWI GGATC 4 cut(s) 105, 826, 1216, 1323
AcsI RAATTY 1 cut(s) 902
AcuI CTGAAG 3 cut(s) 96, 948, 1418
AcyI GRCGYC 1 cut(s) 5
AdeI CACNNNGTG 1 cut(s) 860
AfaI GTAC 1 cut(s) 1453
AfiI CCNNNNNNNGG 4 cut(s) 158, 247, 350, 1300
AgsI TTSAA 9 cut(s) 71, 379, 433, 467, 653, 866, 920, 1158, 1414
AhdI GACNNNNNGTC 1 cut(s) 1012
AjiI CACGTC 1 cut(s) 640
AjnI CCWGG 1 cut(s) 1008
Alw26I GTCTC 2 cut(s) 216, 510
AlwI GGATC 4 cut(s) 105, 826, 1216, 1323
AlwNI CAGNNNCTG 2 cut(s) 809, 1133
Ama87I CYCGRG 2 cut(s) 113, 344
AoxI GGCC 1 cut(s) 302
ApeKI GCWGC 2 cut(s) 211, 1562
ApoI RAATTY 1 cut(s) 902
AseI ATTAAT 1 cut(s) 1518
Asp700I GAANNNNTTC 1 cut(s) 358
Asp718I GGTACC 1 cut(s) 1451
AspLEI GCGC 1 cut(s) 774
AspS9I GGNCC 2 cut(s) 1006, 1588
AsuHPI GGTGA 4 cut(s) 304, 813, 1504, 1580
AvaI CYCGRG 2 cut(s) 113, 344
AvaII GGWCC 2 cut(s) 1006, 1588
BaeGI GKGCMC 1 cut(s) 114
BanI GGYRCC 1 cut(s) 1451
BanII GRGCYC 2 cut(s) 1055, 1359
BbsI GAAGAC 1 cut(s) 351
BbvI GCAGC 2 cut(s) 223, 1574
BccI CCATC 1 cut(s) 1175
BciT130I CCWGG 1 cut(s) 1010
BclI TGATCA 1 cut(s) 964
BcoDI GTCTC 2 cut(s) 216, 510
BfaI CTAG 4 cut(s) 17, 309, 1269, 1335
BfmI CTRYAG 1 cut(s) 1125
BfuAI ACCTGC 1 cut(s) 794
BisI GCNGC 2 cut(s) 212, 1563
BlsI GCNGC 2 cut(s) 213, 1564
Bme1390I CCNGG 1 cut(s) 1010
Bme18I GGWCC 2 cut(s) 1006, 1588
BmeRI GACNNNNNGTC 1 cut(s) 1012
BmeT110I CYCGRG 2 cut(s) 113, 344
BmgBI CACGTC 1 cut(s) 640
BmgT120I GGNCC 2 cut(s) 1006, 1588
BmiI GGNNCC 3 cut(s) 279, 1305, 1453
BmrFI CCNGG 1 cut(s) 1010
BmrI ACTGGG 2 cut(s) 852, 1077
BmsI GCATC 2 cut(s) 1165, 1588
BmuI ACTGGG 2 cut(s) 852, 1077
BpiI GAAGAC 1 cut(s) 351
BplI GAGNNNNNCTC 2 cut(s) 320, 352
BpmI CTGGAG 2 cut(s) 816, 831
BpuEI CTTGAG 1 cut(s) 392
BsaBI GATNNNNATC 1 cut(s) 459
BsaHI GRCGYC 1 cut(s) 5
BsaJI CCNNGG 2 cut(s) 255, 1299
BsaWI WCCGGW 3 cut(s) 289, 451, 823
Bsc4I CCNNNNNNNGG 4 cut(s) 158, 247, 350, 1300
Bse118I RCCGGY 1 cut(s) 280
Bse1I ACTGG 3 cut(s) 532, 858, 1072
Bse8I GATNNNNATC 1 cut(s) 459
BseBI CCWGG 1 cut(s) 1010
BseDI CCNNGG 2 cut(s) 255, 1299
BseGI GGATG 5 cut(s) 460, 954, 1031, 1516, 1552
BseJI GATNNNNATC 1 cut(s) 459
BseLI CCNNNNNNNGG 4 cut(s) 158, 247, 350, 1300
BseMII CTCAG 6 cut(s) 189, 240, 351, 416, 546, 1453
BseNI ACTGG 3 cut(s) 532, 858, 1072
BseRI GAGGAG 1 cut(s) 35
BseSI GKGCMC 1 cut(s) 114
BseXI GCAGC 2 cut(s) 223, 1574
BseYI CCCAGC 1 cut(s) 1294
BsgI GTGCAG 1 cut(s) 458
BshFI GGCC 1 cut(s) 304
BshNI GGYRCC 1 cut(s) 1451
BsiHKCI CYCGRG 2 cut(s) 113, 344
BsiSI CCGG 6 cut(s) 32, 104, 281, 290, 452, 824
BslFI GGGAC 1 cut(s) 1276
BslI CCNNNNNNNGG 4 cut(s) 158, 247, 350, 1300
BsmAI GTCTC 2 cut(s) 216, 510
BsmFI GGGAC 1 cut(s) 1276
BsnI GGCC 1 cut(s) 304
BsoBI CYCGRG 2 cut(s) 113, 344
Bsp1286I GDGCHC 3 cut(s) 114, 1055, 1359
Bsp143I GATC 5 cut(s) 97, 818, 964, 1208, 1315
BspACI CCGC 3 cut(s) 166, 219, 1487
BspANI GGCC 1 cut(s) 304
BspCNI CTCAG 6 cut(s) 190, 239, 350, 415, 547, 1452
BspLI GGNNCC 3 cut(s) 279, 1305, 1453
BspMI ACCTGC 1 cut(s) 794
BspPI GGATC 4 cut(s) 105, 826, 1216, 1323
BspQI GCTCTTC 1 cut(s) 182
BspT107I GGYRCC 1 cut(s) 1451
BsrFI RCCGGY 1 cut(s) 280
BsrI ACTGG 3 cut(s) 532, 858, 1072
BssAI RCCGGY 1 cut(s) 280
BssECI CCNNGG 2 cut(s) 255, 1299
BssMI GATC 5 cut(s) 97, 818, 964, 1208, 1315
BssNI GRCGYC 1 cut(s) 5
BssT1I CCWWGG 1 cut(s) 1299
Bst2UI CCWGG 1 cut(s) 1010
Bst4CI ACNGT 2 cut(s) 512, 1281
Bst6I CTCTTC 9 cut(s) 72, 81, 182, 437, 870, 888, 981, 1536, 1548
BstACI GRCGYC 1 cut(s) 5
BstAPI GCANNNNNTGC 1 cut(s) 1175
BstC8I GCNNGC 4 cut(s) 181, 667, 744, 1377
BstDEI CTNAG 8 cut(s) 198, 226, 337, 402, 555, 1089, 1439, 1602
BstF5I GGATG 5 cut(s) 460, 954, 1031, 1516, 1552
BstHHI GCGC 1 cut(s) 774
BstKTI GATC 5 cut(s) 100, 821, 967, 1211, 1318
BstMAI GTCTC 2 cut(s) 216, 510
BstMBI GATC 5 cut(s) 97, 818, 964, 1208, 1315
BstMWI GCNNNNNNNGC 6 cut(s) 11, 109, 189, 1175, 1184, 1335
BstNI CCWGG 1 cut(s) 1010
BstNSI RCATGY 2 cut(s) 725, 1379
BstSCI CCNGG 1 cut(s) 1008
BstSFI CTRYAG 1 cut(s) 1125
BstSLI GKGCMC 1 cut(s) 114
BstV1I GCAGC 2 cut(s) 223, 1574
BstV2I GAAGAC 1 cut(s) 351
BstX2I RGATCY 2 cut(s) 97, 1208
BstYI RGATCY 2 cut(s) 97, 1208
BsuRI GGCC 1 cut(s) 304
BtrI CACGTC 1 cut(s) 640
BtsCI GGATG 5 cut(s) 460, 954, 1031, 1516, 1552
BtsIMutI CAGTG 1 cut(s) 865
BveI ACCTGC 1 cut(s) 794
Cac8I GCNNGC 4 cut(s) 181, 667, 744, 1377
CaiI CAGNNNCTG 2 cut(s) 809, 1133
CfoI GCGC 1 cut(s) 774
Cfr10I RCCGGY 1 cut(s) 280
Cfr13I GGNCC 2 cut(s) 1006, 1588
CsiI ACCWGGT 1 cut(s) 1008
Csp6I GTAC 1 cut(s) 1452
CviAII CATG 5 cut(s) 722, 968, 1376, 1525, 1592
CviQI GTAC 1 cut(s) 1452
DdeI CTNAG 8 cut(s) 198, 226, 337, 402, 555, 1089, 1439, 1602
DpnI GATC 5 cut(s) 99, 820, 966, 1210, 1317
DpnII GATC 5 cut(s) 97, 818, 964, 1208, 1315
DraI TTTAAA 1 cut(s) 516
DraIII CACNNNGTG 1 cut(s) 860
DriI GACNNNNNGTC 1 cut(s) 1012
Eam1104I CTCTTC 9 cut(s) 72, 81, 182, 437, 870, 888, 981, 1536, 1548
Eam1105I GACNNNNNGTC 1 cut(s) 1012
EarI CTCTTC 9 cut(s) 72, 81, 182, 437, 870, 888, 981, 1536, 1548
EciI GGCGGA 1 cut(s) 234
Eco130I CCWWGG 1 cut(s) 1299
Eco147I AGGCCT 1 cut(s) 304
Eco24I GRGCYC 2 cut(s) 1055, 1359
Eco47I GGWCC 2 cut(s) 1006, 1588
Eco57I CTGAAG 3 cut(s) 96, 948, 1418
Eco88I CYCGRG 2 cut(s) 113, 344
EcoRII CCWGG 1 cut(s) 1008
EcoT14I CCWWGG 1 cut(s) 1299
EcoT22I ATGCAT 1 cut(s) 1479
EcoT38I GRGCYC 2 cut(s) 1055, 1359
ErhI CCWWGG 1 cut(s) 1299
FaeI CATG 5 cut(s) 725, 971, 1379, 1528, 1595
FaiI YATR 8 cut(s) 546, 723, 969, 1377, 1479, 1502, 1526, 1593
FaqI GGGAC 1 cut(s) 1276
FatI CATG 5 cut(s) 721, 967, 1375, 1524, 1591
FbaI TGATCA 1 cut(s) 964
Fnu4HI GCNGC 2 cut(s) 212, 1563
FokI GGATG 5 cut(s) 467, 961, 1018, 1523, 1559
FriOI GRGCYC 2 cut(s) 1055, 1359
Fsp4HI GCNGC 2 cut(s) 212, 1563
FspBI CTAG 4 cut(s) 17, 309, 1269, 1335
GlaI GCGC 1 cut(s) 773
GluI GCNGC 2 cut(s) 212, 1563
GsaI CCCAGC 1 cut(s) 1298
GsuI CTGGAG 2 cut(s) 816, 831
HaeIII GGCC 1 cut(s) 304
HapII CCGG 6 cut(s) 32, 104, 281, 290, 452, 824
HhaI GCGC 1 cut(s) 774
Hin1I GRCGYC 1 cut(s) 5
Hin1II CATG 5 cut(s) 725, 971, 1379, 1528, 1595
Hin6I GCGC 1 cut(s) 772
HinP1I GCGC 1 cut(s) 772
HincII GTYRAC 3 cut(s) 882, 1080, 1390
HindII GTYRAC 3 cut(s) 882, 1080, 1390
HindIII AAGCTT 1 cut(s) 596
HinfI GANTC 7 cut(s) 169, 200, 224, 713, 878, 1130, 1574
HpaII CCGG 6 cut(s) 32, 104, 281, 290, 452, 824
HphI GGTGA 4 cut(s) 304, 813, 1504, 1580
Hpy166II GTNNAC 4 cut(s) 882, 1080, 1390, 1408
Hpy188I TCNGA 8 cut(s) 10, 174, 928, 982, 1135, 1398, 1432, 1579
Hpy188III TCNNGA 2 cut(s) 344, 810
Hpy8I GTNNAC 4 cut(s) 882, 1080, 1390, 1408
Hpy99I CGWCG 2 cut(s) 127, 370
HpyCH4III ACNGT 2 cut(s) 512, 1281
HpyCH4IV ACGT 2 cut(s) 423, 639
HpyCH4V TGCA 8 cut(s) 475, 692, 803, 1106, 1169, 1375, 1421, 1477
HpyF10VI GCNNNNNNNGC 6 cut(s) 11, 109, 189, 1175, 1184, 1335
HpyF3I CTNAG 8 cut(s) 198, 226, 337, 402, 555, 1089, 1439, 1602
HpySE526I ACGT 2 cut(s) 423, 639
Hsp92I GRCGYC 1 cut(s) 5
Hsp92II CATG 5 cut(s) 725, 971, 1379, 1528, 1595
HspAI GCGC 1 cut(s) 772
KpnI GGTACC 1 cut(s) 1455
Ksp22I TGATCA 1 cut(s) 964
Kzo9I GATC 5 cut(s) 97, 818, 964, 1208, 1315
LguI GCTCTTC 1 cut(s) 182
LmnI GCTCC 4 cut(s) 49, 277, 346, 1184
Lsp1109I GCAGC 2 cut(s) 223, 1574
LweI GCATC 2 cut(s) 1165, 1588
MabI ACCWGGT 1 cut(s) 1008
MaeI CTAG 4 cut(s) 17, 309, 1269, 1335
MaeII ACGT 2 cut(s) 423, 639
MaeIII GTNAC 3 cut(s) 283, 635, 784
MalI GATC 5 cut(s) 99, 820, 966, 1210, 1317
MboI GATC 5 cut(s) 97, 818, 964, 1208, 1315
MflI RGATCY 2 cut(s) 97, 1208
MhlI GDGCHC 3 cut(s) 114, 1055, 1359
MluCI AATT 6 cut(s) 467, 480, 902, 1383, 1503, 1515
MlyI GAGTC 5 cut(s) 163, 209, 218, 887, 1139
Mph1103I ATGCAT 1 cut(s) 1479
MroXI GAANNNNTTC 1 cut(s) 358
MseI TTAA 7 cut(s) 515, 612, 623, 645, 1062, 1472, 1518
MslI CAYNNNNRTG 1 cut(s) 1596
MspA1I CMGCKG 2 cut(s) 230, 1565
MspI CCGG 6 cut(s) 32, 104, 281, 290, 452, 824
MspR9I CCNGG 1 cut(s) 1010
MvaI CCWGG 1 cut(s) 1010
MwoI GCNNNNNNNGC 6 cut(s) 11, 109, 189, 1175, 1184, 1335
NdeII GATC 5 cut(s) 97, 818, 964, 1208, 1315
NlaIII CATG 5 cut(s) 725, 971, 1379, 1528, 1595
NlaIV GGNNCC 3 cut(s) 279, 1305, 1453
NmeAIII GCCGAG 1 cut(s) 280
NmuCI GTSAC 1 cut(s) 635
NsiI ATGCAT 1 cut(s) 1479
NspI RCATGY 2 cut(s) 725, 1379
PaeI GCATGC 1 cut(s) 1379
PceI AGGCCT 1 cut(s) 304
PciSI GCTCTTC 1 cut(s) 182
PcsI WCGNNNNNNNCGW 1 cut(s) 138
PdmI GAANNNNTTC 1 cut(s) 358
PfeI GAWTC 2 cut(s) 713, 1574
PflFI GACNNNGTC 1 cut(s) 199
PkrI GCNGC 2 cut(s) 213, 1564
PleI GAGTC 5 cut(s) 163, 208, 218, 886, 1138
PpsI GAGTC 5 cut(s) 163, 208, 218, 886, 1138
PshBI ATTAAT 1 cut(s) 1518
Psp6I CCWGG 1 cut(s) 1008
PspFI CCCAGC 1 cut(s) 1294
PspGI CCWGG 1 cut(s) 1008
PspN4I GGNNCC 3 cut(s) 279, 1305, 1453
PspPI GGNCC 2 cut(s) 1006, 1588
PstNI CAGNNNCTG 2 cut(s) 809, 1133
PsuI RGATCY 2 cut(s) 97, 1208
PsyI GACNNNGTC 1 cut(s) 199
PvuII CAGCTG 2 cut(s) 230, 1565
RsaI GTAC 1 cut(s) 1453
RsaNI GTAC 1 cut(s) 1452
RseI CAYNNNNRTG 1 cut(s) 1596
SapI GCTCTTC 1 cut(s) 182
SaqAI TTAA 7 cut(s) 515, 612, 623, 645, 1062, 1472, 1518
SatI GCNGC 2 cut(s) 212, 1563
Sau3AI GATC 5 cut(s) 97, 818, 964, 1208, 1315
Sau96I GGNCC 2 cut(s) 1006, 1588
SchI GAGTC 5 cut(s) 163, 209, 218, 887, 1139
ScrFI CCNGG 1 cut(s) 1010
SduI GDGCHC 3 cut(s) 114, 1055, 1359
SexAI ACCWGGT 1 cut(s) 1008
SfaNI GCATC 2 cut(s) 1165, 1588
SfcI CTRYAG 1 cut(s) 1125
SinI GGWCC 2 cut(s) 1006, 1588
SmiMI CAYNNNNRTG 1 cut(s) 1596
SmlI CTYRAG 1 cut(s) 407
SmoI CTYRAG 1 cut(s) 407
SphI GCATGC 1 cut(s) 1379
Sse9I AATT 6 cut(s) 467, 480, 902, 1383, 1503, 1515
SseBI AGGCCT 1 cut(s) 304
SsiI CCGC 3 cut(s) 166, 219, 1487
SspI AATATT 1 cut(s) 649
SspMI CTAG 4 cut(s) 17, 309, 1269, 1335
StuI AGGCCT 1 cut(s) 304
StyD4I CCNGG 1 cut(s) 1008
StyI CCWWGG 1 cut(s) 1299
TaaI ACNGT 2 cut(s) 512, 1281
TaiI ACGT 2 cut(s) 426, 642
TaqI TCGA 4 cut(s) 185, 203, 440, 1283
TasI AATT 6 cut(s) 467, 480, 902, 1383, 1503, 1515
TfiI GAWTC 2 cut(s) 713, 1574
Tru1I TTAA 7 cut(s) 515, 612, 623, 645, 1062, 1472, 1518
Tru9I TTAA 7 cut(s) 515, 612, 623, 645, 1062, 1472, 1518
TscAI CASTG 1 cut(s) 865
TseFI GTSAC 1 cut(s) 635
TseI GCWGC 2 cut(s) 211, 1562
Tsp45I GTSAC 1 cut(s) 635
TspDTI ATGAA 8 cut(s) 888, 906, 965, 969, 999, 1011, 1020, 1563
TspGWI ACGGA 2 cut(s) 140, 1523
TspRI CASTG 1 cut(s) 865
Tth111I GACNNNGTC 1 cut(s) 199
VpaK11BI GGWCC 2 cut(s) 1006, 1588
VspI ATTAAT 1 cut(s) 1518
XapI RAATTY 1 cut(s) 902
XceI RCATGY 2 cut(s) 725, 1379
XmnI GAANNNNTTC 1 cut(s) 358
XspI CTAG 4 cut(s) 17, 309, 1269, 1335
Zsp2I ATGCAT 1 cut(s) 1479
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.