Rorug01G0244000

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
Physical Location & Seq
Forward (+)
34956370 .. 34961321
4952 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0244000.1

Sequence Viewer

Length: 1566 bp
ATGGCCCAAGTGAGCAAAATCTGTGGCAATGGAGCTCAAAGCATCAATCTTTTGCCCAATGTCTCCAAACCCCAGATACCCAAATCGTTAAATTCAATCTCTTTGAAGTCACAGCTTTTGGGTTCTTCGAATTCTGTGAGTTTGAAGATGAAAAATGGGGTTGTGGGTGGTAAAGCCAGGGCTGGTGGGCTTAGAGTTTCGGCTTCAGTTGTTACAGCAGAGAAGCCGTCGACGGTGCCGGAGATTGTGTTGCAACCCATCAAAGAAATTTCGGGTACCATAACTTTGCCGGGTTCTAAGTCCTTGTCCAATCGGATTCTGCTTATTGCTGCTCTTTCTGAGGGAACAACTGTTGTAGACAATTTACTAGATAGTGATGATATCAATTATATGCTTGGTGCGTTGAAAACGCTTGGGCTAAAAGTGGAAGATGACAAGGCAAACAAAAGAGCTGTTGTGGAGGGTTGTGGTGGTCAGTTTCCTATGGGGAATAAATCCGGAGAGGAAGTTCAACTTTTCCTTGGAAATGCTGGAACAGCAATGAGGCCGTTGACTGCGGCAGTAACTGCTGCTGGTGGACATTCTAGGTATGTACTTGATGGGGTGCCCCGAATGAGGGAGAGACCAATTGGAGATTTGGTCACTGGTCTTAAGCAGCTTGGTGCAGATGTTGACTGTTTTCTTGGAACAGATTGTCCTCCTGTTCGTGTAATTGGAAAGGGAGGCCTTCCAGGAGGCAAGGTGAAACTCTCTGGATCAATCAGTAGTCAATATTTGACTTCTTTGCTTATGGCGGCTCCTTTGGCTCTGGGAGATGTTGAAGTTGAGATTATTGATAAGCTGATTTCCATTCCATATGTTGAAATGACTTTGAAATTGATGGAACGCTTTGGGGTCACAGTGGAACATAGTGATAGCTGGGATCGATTTTTGGTCCGAGGAGGTCAAAAATACAAGTCTCCTGGAAAAGCCTTTGTCGAAGGTGATGCTTCAAGTGCTAGTTACTTTCTAGCTGGTGCTGCAGTAACGGGTGGGACTGTAACTGTTGAAGGCTGTGGCACAAGCAGTTTACAGGGAGATGTAAAATTCGCTGAAGTTCTTGAAAAGATGGGCGCTGAAGTTACCTGGACAGAGAATAGTGTCACCGTCACAGGACCTCCACGACATTCTTCTGGAAGAAAGCACTTGAAAGCTGTTGATGTCAACATGAACAAGATGCCGGATGTTGCCATGACTCTTGCTGTAGTTGCTCTTTTTGCCGATGGTCCAACTGCCATAAGAGATGTGGCAAGCTGGAGAGTGAAGGAGACAGAAAGGATGATTGCCATTTGCACCGAACTCAGGAAGTTGGGAGCCACTGTTGAAGAAGGGCCTGATTACTGTGTAATCACACCACCAGAAAAACTAAATGTAACAGCCATAGACACATACGATGACCACAGAATGGCCATGGCATTCTCCCTTGCTGCCTGTGGAGACGTTCCCGTTACCATCAAGGATCCCGGTTGCACCAGAAAAACATTCCCCAACTACTTCGAAGTCCTGGAGAAGTTTACAAAACATTAA

Protein Analysis

521

Amino Acids

55.11

Weight (kDa)

7.96

Isoelectric Point (pI)

27.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
EPSP_synthase PF00275 85 - 515 6.8e-141 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000028)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g45420 FvH4_4g14031 FvH4_5g20780 FvH4_6g28530 FvH4_7g14020 FvH4_7g14030 FvH4_7g14040 FvH4_7g14050 FvH4_7g14060 FvH4_7g14070 FvH4_7g14090 FvH4_7g14110 FvH4_7g14140 FvH4_7g14450
malus_domestica MD00G1189100.v1.1 MD01G1018600.v1.1 MD01G1053800.v1.1 MD01G1053900.v1.1 MD01G1054000.v1.1 MD01G1054100.v1.1 MD01G1056700.v1.1 MD01G1057000.v1.1 MD01G1057300.v1.1 MD01G1057400.v1.1 MD01G1061600.v1.1 MD01G1061800.v1.1 MD01G1061900.v1.1 MD01G1062000.v1.1 MD01G1062400.v1.1 MD01G1062500.v1.1 MD01G1063200.v1.1 MD01G1063300.v1.1 MD01G1063400.v1.1 MD01G1063700.v1.1 MD01G1063900.v1.1 MD01G1064200.v1.1 MD01G1064300.v1.1 MD01G1064400.v1.1 MD01G1064600.v1.1 MD01G1064700.v1.1 MD01G1181100.v1.1 MD01G1212300.v1.1 MD01G1212500.v1.1 MD01G1212600.v1.1 MD02G1271900.v1.1 MD07G1136500.v1.1 MD07G1139300.v1.1 MD07G1141200.v1.1 MD07G1144700.v1.1 MD08G1144200.v1.1 MD14G1186300.v1.1 MD14G1186500.v1.1 MD14G1186700.v1.1 MD14G1186800.v1.1 MD15G1351300.v1.1 MD15G1439500.v1.1
prunus_persica Prupe.1G067000_v2.0.a1 Prupe.2G077400_v2.0.a1 Prupe.2G077700_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078600_v2.0.a1 Prupe.2G078800_v2.0.a1 Prupe.2G099600_v2.0.a1 Prupe.2G099700_v2.0.a1 Prupe.2G155100_v2.0.a1 Prupe.2G155500_v2.0.a1 Prupe.2G155600_v2.0.a1 Prupe.2G155800_v2.0.a1 Prupe.2G155900_v2.0.a1 Prupe.2G156100_v2.0.a1 Prupe.2G166100_v2.0.a1 Prupe.2G166300_v2.0.a1 Prupe.2G167500_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G168400_v2.0.a1 Prupe.2G168700_v2.0.a1 Prupe.2G168800_v2.0.a1 Prupe.2G169000_v2.0.a1 Prupe.2G169100_v2.0.a1 Prupe.2G169200_v2.0.a1 Prupe.2G169500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G172300_v2.0.a1 Prupe.2G304800_v2.0.a1 Prupe.4G264800_v2.0.a1 Prupe.4G265000_v2.0.a1 Prupe.5G051900_v2.0.a1 Prupe.5G052000_v2.0.a1
pyrus_communis pycom01g08380 pycom01g08430 pycom01g08490 pycom01g08520 pycom01g08540 pycom01g08550 pycom01g08600 pycom01g08630 pycom01g08660 pycom01g08720 pycom01g09180 pycom01g09200 pycom01g09210 pycom01g09270 pycom01g09280 pycom01g09300 pycom01g09380 pycom01g19110 pycom01g22260 pycom01g22310 pycom01g22330 pycom01g22350 pycom01g22360 pycom02g23250 pycom07g13420 pycom07g13670 pycom07g13900 pycom07g13910 pycom07g13960 pycom07g13970 pycom07g25680 pycom11g22830
rosa_chinensis RchiOBHm_Chr0c22g0500431 RchiOBHm_Chr0c22g0500441 RchiOBHm_Chr0c22g0500561 RchiOBHm_Chr0c22g0500571 RchiOBHm_Chr0c22g0500611 RchiOBHm_Chr0c22g0500621 RchiOBHm_Chr0c22g0500631 RchiOBHm_Chr0c22g0500681 RchiOBHm_Chr1g0348221 RchiOBHm_Chr1g0348251 RchiOBHm_Chr1g0352861 RchiOBHm_Chr1g0352871 RchiOBHm_Chr1g0352891 RchiOBHm_Chr1g0352901 RchiOBHm_Chr1g0354671 RchiOBHm_Chr1g0354701 RchiOBHm_Chr1g0354711 RchiOBHm_Chr1g0354751 RchiOBHm_Chr1g0354761 RchiOBHm_Chr1g0354841 RchiOBHm_Chr1g0354851 RchiOBHm_Chr1g0354881 RchiOBHm_Chr1g0354971 RchiOBHm_Chr1g0354981 RchiOBHm_Chr1g0354991 RchiOBHm_Chr1g0355001 RchiOBHm_Chr1g0355011 RchiOBHm_Chr1g0355021 RchiOBHm_Chr1g0355861 RchiOBHm_Chr1g0379671 RchiOBHm_Chr1g0379681 RchiOBHm_Chr2g0096591 RchiOBHm_Chr2g0132821 RchiOBHm_Chr3g0454901 RchiOBHm_Chr3g0472711 RchiOBHm_Chr4g0400791 RchiOBHm_Chr5g0069481 RchiOBHm_Chr5g0069511 RchiOBHm_Chr5g0069551 RchiOBHm_Chr6g0254651 RchiOBHm_Chr6g0259721 RchiOBHm_Chr7g0205911 RchiOBHm_Chr7g0206401 RchiOBHm_Chr7g0206571 RchiOBHm_Chr7g0206581 RchiOBHm_Chr7g0206621 RchiOBHm_Chr7g0206631 RchiOBHm_Chr7g0206641 RchiOBHm_Chr7g0206681 RchiOBHm_Chr7g0206691 RchiOBHm_Chr7g0206751 RchiOBHm_Chr7g0206761 RchiOBHm_Chr7g0206851 RchiOBHm_Chr7g0206911 RchiOBHm_Chr7g0206921 RchiOBHm_Chr7g0207001 RchiOBHm_Chr7g0207011 RchiOBHm_Chr7g0207031 RchiOBHm_Chr7g0207101 RchiOBHm_Chr7g0207161 RchiOBHm_Chr7g0207201 RchiOBHm_Chr7g0207271 RchiOBHm_Chr7g0207301 RchiOBHm_Chr7g0207311 RchiOBHm_Chr7g0207421 RchiOBHm_Chr7g0207481 RchiOBHm_Chr7g0207491 RchiOBHm_Chr7g0207501 RchiOBHm_Chr7g0207521 RchiOBHm_Chr7g0207531 RchiOBHm_Chr7g0207561 RchiOBHm_Chr7g0207571 RchiOBHm_Chr7g0207581 RchiOBHm_Chr7g0207601 RchiOBHm_Chr7g0207621 RchiOBHm_Chr7g0207631 RchiOBHm_Chr7g0207651 RchiOBHm_Chr7g0207661 RchiOBHm_Chr7g0207711 RchiOBHm_Chr7g0207761 RchiOBHm_Chr7g0207801 RchiOBHm_Chr7g0208821 RchiOBHm_Chr7g0208831 RchiOBHm_Chr7g0208841 RchiOBHm_Chr7g0213601 RchiOBHm_Chr7g0215981 RchiOBHm_Chr7g0216021
rosa_laevigata RLG00000003193 RLG00000003194 RLG00000003287 RLG00000003288 RLG00000003289 RLG00000003293 RLG00000003294 RLG00000003295 RLG00000003297 RLG00000003299 RLG00000003301 RLG00000003327 RLG00000003347 RLG00000016653 RLG00000018642 RLG00000018643 RLG00000019285 RLG00000022542 RLG00000026368 RLG00000026371 RLG00000028124 RLG00000028125 RLG00000028183 RLG00000028184 RLG00000028185 RLG00000028188 RLG00000028673 RLG00000029267 RLG00000029325 RLG00000029674 RLG00000032883 RLG00000036055 RLG00000036058 RLG00000036065 RLG00000036068 RLG00000036071 RLG00000036072 RLG00000036075 RLG00000036076
rosa_multiflora Rmu_co8250183.1_g000001 Rmu_co8271981.1_g000001 Rmu_co8410829.1_g000001 Rmu_co8432879.1_g000001 Rmu_co8441941.1_g000001 Rmu_sc0000076.1_g000031 Rmu_sc0000738.1_g000038 Rmu_sc0000848.1_g000003 Rmu_sc0000848.1_g000014 Rmu_sc0000848.1_g000015 Rmu_sc0000848.1_g000016 Rmu_sc0001264.1_g000001 Rmu_sc0002284.1_g000018 Rmu_sc0002356.1_g000011 Rmu_sc0003020.1_g000003 Rmu_sc0003115.1_g000001 Rmu_sc0003115.1_g000002 Rmu_sc0003115.1_g000003 Rmu_sc0003115.1_g000004 Rmu_sc0003115.1_g000005 Rmu_sc0003115.1_g000008 Rmu_sc0003115.1_g000010 Rmu_sc0003115.1_g000011 Rmu_sc0003115.1_g000014 Rmu_sc0003565.1_g000002 Rmu_sc0003652.1_g000013 Rmu_sc0003652.1_g000015 Rmu_sc0003652.1_g000016 Rmu_sc0003652.1_g000019 Rmu_sc0003940.1_g000001 Rmu_sc0003940.1_g000004 Rmu_sc0003940.1_g000009 Rmu_sc0004084.1_g000010 Rmu_sc0004705.1_g000021 Rmu_sc0004972.1_g000007 Rmu_sc0004987.1_g000002 Rmu_sc0004987.1_g000006 Rmu_sc0005065.1_g000018 Rmu_sc0005065.1_g000029 Rmu_sc0005391.1_g000002 Rmu_sc0005633.1_g000003 Rmu_sc0005633.1_g000008 Rmu_sc0006632.1_g000014 Rmu_sc0006632.1_g000018 Rmu_sc0006681.1_g000010 Rmu_sc0006681.1_g000011 Rmu_sc0006733.1_g000003 Rmu_sc0007385.1_g000005 Rmu_sc0007385.1_g000007 Rmu_sc0007385.1_g000009 Rmu_sc0007385.1_g000016 Rmu_sc0007645.1_g000002 Rmu_sc0007645.1_g000003 Rmu_sc0007645.1_g000022 Rmu_sc0007828.1_g000008 Rmu_sc0008509.1_g000003 Rmu_sc0008509.1_g000015 Rmu_sc0008509.1_g000016 Rmu_sc0008509.1_g000020 Rmu_sc0008509.1_g000030 Rmu_sc0008509.1_g000041 Rmu_sc0008756.1_g000001 Rmu_sc0008756.1_g000003 Rmu_sc0013028.1_g000002 Rmu_sc0013028.1_g000003 Rmu_sc0013028.1_g000005 Rmu_sc0013160.1_g000001 Rmu_sc0014454.1_g000009 Rmu_sc0014455.1_g000007 Rmu_sc0014659.1_g000004 Rmu_sc0017798.1_g000002 Rmu_sc0017798.1_g000004 Rmu_sc0029608.1_g000001 Rmu_sc0037861.1_g000001 Rmu_sc0038750.1_g000001 Rmu_sc0042995.1_g000001 Rmu_ssc0000161.1_g000017
rosa_roxburghii Rroxscaffold_1G00009180 Rroxscaffold_1G00009190 Rroxscaffold_1G00011450 Rroxscaffold_1G00011480 Rroxscaffold_2G00111660 Rroxscaffold_2G00113570 Rroxscaffold_2G00122140 Rroxscaffold_3G00243730 Rroxscaffold_3G00245750 Rroxscaffold_3G00245760 Rroxscaffold_3G00250220 Rroxscaffold_3G00251160 Rroxscaffold_3G00251270 Rroxscaffold_3G00251280 Rroxscaffold_3G00251300 Rroxscaffold_3G00251340 Rroxscaffold_3G00251350 Rroxscaffold_3G00251390 Rroxscaffold_3G00251400 Rroxscaffold_3G00251560 Rroxscaffold_3G00251570 Rroxscaffold_3G00251870 Rroxscaffold_3G00252200 Rroxscaffold_3G00252210 Rroxscaffold_4G00279970 Rroxscaffold_4G00299970 Rroxscaffold_4G00300760 Rroxscaffold_4G00300780 Rroxscaffold_4G00300810 Rroxscaffold_4G00300850 Rroxscaffold_4G00307080 Rroxscaffold_4G00307100 Rroxscaffold_4G00313990 Rroxscaffold_6G00405080
rosa_rugosa Rorug01G0193600 Rorug01G0193700 Rorug01G0243800 Rorug01G0244000 Rorug01G0244000 Rorug01G0244400 Rorug01G0414300.1 Rorug01G0414500 Rorug01G0414600 Rorug02G0235600 Rorug02G0307900 Rorug02G0583100 Rorug02G0583200 Rorug02G0583300 Rorug05G0398000 Rorug05G0398100 Rorug05G0398200 Rorug05G0580300 Rorug05G0590300 Rorug06G0116000 Rorug06G0116100 Rorug07G0096800 Rorug07G0097100.1 Rorug07G0097200 Rorug07G0098600 Rorug07G0098600 Rorug07G0098700 Rorug07G0099100 Rorug07G0106100 Rorug07G0106200 Rorug07G0106200 Rorug07G0106300 Rorug07G0157600 Rorug07G0157700 Rorug07G0157700 Rorug07G0157800
rosa_samantha Rh1AG255500 Rh1AG256700 Rh1BG225800 Rh1BG226200 Rh1BG230000 Rh1CG195300 Rh1CG238400 Rh1CG238500 Rh1CG238900 Rh1CG239000 Rh1CG239300 Rh1CG239400 Rh1CG239800 Rh1CG240000 Rh1CG240200 Rh1CG240300 Rh1CG244300 Rh1CG406900 Rh1CG407300 Rh1CG407400 Rh2CG343600 Rh2DG383200 Rh3BG205900 Rh4AG404400 Rh4BG415500 Rh5AG455200 Rh5AG455600 Rh5CG497000 Rh5CG497200 Rh7AG228800 Rh7AG230400 Rh7AG230800 Rh7AG231200 Rh7AG231600 Rh7AG231800 Rh7AG232100 Rh7AG241600 Rh7BG236200 Rh7CG238200 Rh7CG239100 Rh7CG243400 Rh7CG244900
rosa_wichuraiana Rw0G023040 Rw1G017780 Rw1G022320 Rw1G022340 Rw1G022410 Rw1G022420 Rw1G022440 Rw1G022460 Rw1G022490 Rw1G022500 Rw1G022530 Rw1G022550 Rw1G022560 Rw1G022600 Rw1G023060 Rw1G038150 Rw1G038160 Rw2G008210 Rw2G022350 Rw2G029290 Rw4G015050 Rw4G019850 Rw5G024060 Rw5G042460 Rw7G019160 Rw7G019460 Rw7G019690 Rw7G019830 Rw7G019860 Rw7G019880 Rw7G019890 Rw7G019930 Rw7G019990 Rw7G020460 Rw7G025100 Rw7G025120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 275
AccB1I GGYRCC 3 cut(s) 235, 275, 604
AccB7I CCANNNNNTGG 1 cut(s) 1444
AccI GTMKAC 2 cut(s) 230, 357
AccIII TCCGGA 1 cut(s) 497
AciI CCGC 2 cut(s) 557, 794
AclWI GGATC 4 cut(s) 763, 930, 1493, 1506
AcoI YGGCCR 1 cut(s) 1446
AcsI RAATTY 4 cut(s) 91, 130, 267, 1085
AcuI CTGAAG 3 cut(s) 189, 1113, 1137
AfaI GTAC 2 cut(s) 277, 594
AfiI CCNNNNNNNGG 4 cut(s) 615, 616, 1341, 1444
AflII CTTAAG 1 cut(s) 650
AjnI CCWGG 5 cut(s) 176, 730, 961, 1124, 1542
AloI GAACNNNNNNTCC 4 cut(s) 492, 524, 679, 711
AluBI AGCT 9 cut(s) 35, 115, 452, 658, 841, 918, 1013, 1193, 1293
AluI AGCT 9 cut(s) 35, 115, 452, 658, 841, 918, 1013, 1193, 1293
Alw21I GWGCWC 1 cut(s) 37
Alw26I GTCTC 5 cut(s) 67, 616, 963, 1301, 1470
AlwI GGATC 4 cut(s) 763, 930, 1493, 1506
AlwNI CAGNNNCTG 1 cut(s) 566
Aor13HI TCCGGA 1 cut(s) 497
AoxI GGCC 5 cut(s) 3, 545, 724, 1370, 1446
ApeKI GCWGC 5 cut(s) 329, 569, 655, 1019, 1466
ApoI RAATTY 4 cut(s) 91, 130, 267, 1085
Asp718I GGTACC 1 cut(s) 275
AspLEI GCGC 1 cut(s) 1115
AspS9I GGNCC 5 cut(s) 4, 934, 1154, 1265, 1370
AsuC2I CCSGG 2 cut(s) 291, 1503
AsuHPI GGTGA 3 cut(s) 754, 995, 1135
AsuII TTCGAA 2 cut(s) 128, 1536
AvaII GGWCC 3 cut(s) 934, 1154, 1265
BaeGI GKGCMC 1 cut(s) 609
BalI TGGCCA 1 cut(s) 1448
BamHI GGATCC 1 cut(s) 1498
BanI GGYRCC 3 cut(s) 235, 275, 604
BanII GRGCYC 1 cut(s) 37
Bbv12I GWGCWC 1 cut(s) 37
BbvI GCAGC 5 cut(s) 316, 556, 667, 1006, 1453
BccI CCATC 6 cut(s) 266, 593, 874, 1102, 1256, 1499
BceAI ACGGC 2 cut(s) 211, 532
BcgI CGANNNNNNTGC 2 cut(s) 968, 1002
BciT130I CCWGG 5 cut(s) 178, 732, 963, 1126, 1544
BcnI CCSGG 2 cut(s) 291, 1503
BcoDI GTCTC 5 cut(s) 67, 616, 963, 1301, 1470
BfaI CTAG 4 cut(s) 368, 585, 999, 1010
BfmI CTRYAG 2 cut(s) 1020, 1242
BfoI RGCGCY 1 cut(s) 1116
BfrI CTTAAG 1 cut(s) 650
BisI GCNGC 7 cut(s) 330, 558, 570, 656, 795, 1020, 1467
BlsI GCNGC 7 cut(s) 331, 559, 571, 657, 796, 1021, 1468
Bme1390I CCNGG 7 cut(s) 178, 291, 732, 963, 1126, 1503, 1544
Bme18I GGWCC 3 cut(s) 934, 1154, 1265
BmgT120I GGNCC 5 cut(s) 4, 934, 1154, 1265, 1370
BmiI GGNNCC 6 cut(s) 237, 277, 606, 798, 1354, 1500
BmrFI CCNGG 7 cut(s) 178, 291, 732, 963, 1126, 1503, 1544
BmsI GCATC 3 cut(s) 51, 976, 1206
BpmI CTGGAG 2 cut(s) 1315, 1565
Bpu14I TTCGAA 2 cut(s) 128, 1536
BpuMI CCSGG 2 cut(s) 291, 1503
Bsa29I ATCGAT 1 cut(s) 925
BsaI GGTCTC 1 cut(s) 616
BsaJI CCNNGG 4 cut(s) 177, 520, 937, 1449
BsaWI WCCGGW 1 cut(s) 497
Bsc4I CCNNNNNNNGG 4 cut(s) 615, 616, 1341, 1444
Bse1I ACTGG 1 cut(s) 649
Bse3DI GCAATG 2 cut(s) 34, 546
BseAI TCCGGA 1 cut(s) 497
BseBI CCWGG 5 cut(s) 178, 732, 963, 1126, 1544
BseCI ATCGAT 1 cut(s) 925
BseDI CCNNGG 4 cut(s) 177, 520, 937, 1449
BseGI GGATG 2 cut(s) 1228, 1323
BseLI CCNNNNNNNGG 4 cut(s) 615, 616, 1341, 1444
BseMI GCAATG 2 cut(s) 34, 546
BseMII CTCAG 2 cut(s) 330, 1354
BseNI ACTGG 1 cut(s) 649
BseRI GAGGAG 1 cut(s) 954
BseSI GKGCMC 1 cut(s) 609
BseXI GCAGC 5 cut(s) 316, 556, 667, 1006, 1453
BseYI CCCAGC 1 cut(s) 918
BsgI GTGCAG 1 cut(s) 684
BshFI GGCC 5 cut(s) 5, 547, 726, 1372, 1448
BshNI GGYRCC 3 cut(s) 235, 275, 604
BshVI ATCGAT 1 cut(s) 925
BsiHKAI GWGCWC 1 cut(s) 37
BsiSI CCGG 5 cut(s) 239, 290, 498, 1220, 1503
BslFI GGGAC 1 cut(s) 1048
BslI CCNNNNNNNGG 4 cut(s) 615, 616, 1341, 1444
BsmAI GTCTC 5 cut(s) 67, 616, 963, 1301, 1470
BsmBI CGTCTC 1 cut(s) 1470
BsmFI GGGAC 1 cut(s) 1048
BsmI GAATGC 1 cut(s) 1454
BsnI GGCC 5 cut(s) 5, 547, 726, 1372, 1448
Bso31I GGTCTC 1 cut(s) 616
Bsp119I TTCGAA 2 cut(s) 128, 1536
Bsp1286I GDGCHC 2 cut(s) 37, 609
Bsp13I TCCGGA 1 cut(s) 497
Bsp143I GATC 3 cut(s) 755, 922, 1498
Bsp19I CCATGG 1 cut(s) 1449
BspACI CCGC 2 cut(s) 557, 794
BspANI GGCC 5 cut(s) 5, 547, 726, 1372, 1448
BspCNI CTCAG 2 cut(s) 331, 1353
BspDI ATCGAT 1 cut(s) 925
BspEI TCCGGA 1 cut(s) 497
BspLI GGNNCC 6 cut(s) 237, 277, 606, 798, 1354, 1500
BspMAI CTGCAG 1 cut(s) 1024
BspPI GGATC 4 cut(s) 763, 930, 1493, 1506
BspT104I TTCGAA 2 cut(s) 128, 1536
BspT107I GGYRCC 3 cut(s) 235, 275, 604
BspTI CTTAAG 1 cut(s) 650
BspTNI GGTCTC 1 cut(s) 616
BsrDI GCAATG 2 cut(s) 34, 546
BsrI ACTGG 1 cut(s) 649
BssECI CCNNGG 4 cut(s) 177, 520, 937, 1449
BssMI GATC 3 cut(s) 755, 922, 1498
BssT1I CCWWGG 2 cut(s) 520, 1449
Bst2UI CCWGG 5 cut(s) 178, 732, 963, 1126, 1544
Bst4CI ACNGT 9 cut(s) 235, 352, 677, 901, 1039, 1045, 1147, 1360, 1382
BstAFI CTTAAG 1 cut(s) 650
BstAPI GCANNNNNTGC 1 cut(s) 566
BstBI TTCGAA 2 cut(s) 128, 1536
BstC8I GCNNGC 1 cut(s) 1291
BstDEI CTNAG 4 cut(s) 191, 297, 339, 1340
BstDSI CCRYGG 1 cut(s) 1449
BstF5I GGATG 2 cut(s) 1228, 1323
BstH2I RGCGCY 1 cut(s) 1116
BstHHI GCGC 1 cut(s) 1115
BstKTI GATC 3 cut(s) 758, 925, 1501
BstMAI GTCTC 5 cut(s) 67, 616, 963, 1301, 1470
BstMBI GATC 3 cut(s) 755, 922, 1498
BstMWI GCNNNNNNNGC 7 cut(s) 536, 566, 803, 995, 1019, 1247, 1256
BstNI CCWGG 5 cut(s) 178, 732, 963, 1126, 1544
BstSCI CCNGG 7 cut(s) 176, 289, 730, 961, 1124, 1501, 1542
BstSFI CTRYAG 2 cut(s) 1020, 1242
BstSLI GKGCMC 1 cut(s) 609
BstV1I GCAGC 5 cut(s) 316, 556, 667, 1006, 1453
BstX2I RGATCY 1 cut(s) 1498
BstYI RGATCY 1 cut(s) 1498
Bsu15I ATCGAT 1 cut(s) 925
BsuRI GGCC 5 cut(s) 5, 547, 726, 1372, 1448
BsuTUI ATCGAT 1 cut(s) 925
BtgI CCRYGG 1 cut(s) 1449
BtsCI GGATG 2 cut(s) 1228, 1323
BtsIMutI CAGTG 3 cut(s) 642, 906, 1356
Cac8I GCNNGC 1 cut(s) 1291
CaiI CAGNNNCTG 1 cut(s) 566
CfoI GCGC 1 cut(s) 1115
Cfr13I GGNCC 5 cut(s) 4, 934, 1154, 1265, 1370
ClaI ATCGAT 1 cut(s) 925
Csp6I GTAC 2 cut(s) 276, 593
CspCI CAANNNNNGTGG 2 cut(s) 4, 39
CviAII CATG 3 cut(s) 1207, 1231, 1450
CviQI GTAC 2 cut(s) 276, 593
DdeI CTNAG 4 cut(s) 191, 297, 339, 1340
DpnI GATC 3 cut(s) 757, 924, 1500
DpnII GATC 3 cut(s) 755, 922, 1498
EaeI YGGCCR 1 cut(s) 1446
Ecl136II GAGCTC 1 cut(s) 35
Eco130I CCWWGG 2 cut(s) 520, 1449
Eco147I AGGCCT 1 cut(s) 726
Eco24I GRGCYC 1 cut(s) 37
Eco31I GGTCTC 1 cut(s) 616
Eco32I GATATC 1 cut(s) 382
Eco47I GGWCC 3 cut(s) 934, 1154, 1265
Eco53kI GAGCTC 1 cut(s) 35
Eco57I CTGAAG 3 cut(s) 189, 1113, 1137
EcoICRI GAGCTC 1 cut(s) 35
EcoO109I RGGNCCY 2 cut(s) 1154, 1370
EcoRI GAATTC 1 cut(s) 130
EcoRII CCWGG 5 cut(s) 176, 730, 961, 1124, 1542
EcoRV GATATC 1 cut(s) 382
EcoT14I CCWWGG 2 cut(s) 520, 1449
EcoT38I GRGCYC 1 cut(s) 37
ErhI CCWWGG 2 cut(s) 520, 1449
Esp3I CGTCTC 1 cut(s) 1470
FaeI CATG 3 cut(s) 1210, 1234, 1453
FalI AAGNNNNNCTT 2 cut(s) 498, 530
FaqI GGGAC 1 cut(s) 1048
FatI CATG 3 cut(s) 1206, 1230, 1449
FauNDI CATATG 1 cut(s) 856
FblI GTMKAC 2 cut(s) 230, 357
Fnu4HI GCNGC 7 cut(s) 330, 558, 570, 656, 795, 1020, 1467
FokI GGATG 2 cut(s) 1235, 1330
FriOI GRGCYC 1 cut(s) 37
Fsp4HI GCNGC 7 cut(s) 330, 558, 570, 656, 795, 1020, 1467
FspBI CTAG 4 cut(s) 368, 585, 999, 1010
GlaI GCGC 1 cut(s) 1114
GluI GCNGC 7 cut(s) 330, 558, 570, 656, 795, 1020, 1467
GsaI CCCAGC 1 cut(s) 922
GsuI CTGGAG 2 cut(s) 1315, 1565
HaeII RGCGCY 1 cut(s) 1116
HaeIII GGCC 5 cut(s) 5, 547, 726, 1372, 1448
HapII CCGG 5 cut(s) 239, 290, 498, 1220, 1503
HhaI GCGC 1 cut(s) 1115
Hin1II CATG 3 cut(s) 1210, 1234, 1453
Hin6I GCGC 1 cut(s) 1113
HinP1I GCGC 1 cut(s) 1113
HincII GTYRAC 4 cut(s) 231, 552, 673, 1204
HindII GTYRAC 4 cut(s) 231, 552, 673, 1204
HinfI GANTC 2 cut(s) 316, 1234
HpaII CCGG 5 cut(s) 239, 290, 498, 1220, 1503
HphI GGTGA 3 cut(s) 754, 995, 1135
Hpy166II GTNNAC 8 cut(s) 231, 358, 552, 578, 673, 1070, 1204, 1554
Hpy188I TCNGA 3 cut(s) 315, 340, 938
Hpy188III TCNNGA 5 cut(s) 498, 753, 1100, 1173, 1342
Hpy8I GTNNAC 8 cut(s) 231, 358, 552, 578, 673, 1070, 1204, 1554
Hpy99I CGWCG 2 cut(s) 232, 235
HpyAV CCTTC 5 cut(s) 737, 974, 1043, 1297, 1361
HpyCH4III ACNGT 9 cut(s) 235, 352, 677, 901, 1039, 1045, 1147, 1360, 1382
HpyCH4IV ACGT 1 cut(s) 1479
HpyCH4V TGCA 5 cut(s) 253, 665, 1022, 1332, 1509
HpyF10VI GCNNNNNNNGC 7 cut(s) 536, 566, 803, 995, 1019, 1247, 1256
HpyF3I CTNAG 4 cut(s) 191, 297, 339, 1340
HpySE526I ACGT 1 cut(s) 1479
Hsp92II CATG 3 cut(s) 1210, 1234, 1453
HspAI GCGC 1 cut(s) 1113
Kpn2I TCCGGA 1 cut(s) 497
KpnI GGTACC 1 cut(s) 279
Kzo9I GATC 3 cut(s) 755, 922, 1498
LmnI GCTCC 3 cut(s) 32, 802, 1352
Lsp1109I GCAGC 5 cut(s) 316, 556, 667, 1006, 1453
LweI GCATC 3 cut(s) 51, 976, 1206
MaeI CTAG 4 cut(s) 368, 585, 999, 1010
MaeII ACGT 1 cut(s) 1479
MalI GATC 3 cut(s) 757, 924, 1500
MboI GATC 3 cut(s) 755, 922, 1498
MboII GAAGA 6 cut(s) 117, 157, 440, 1161, 1188, 1376
MfeI CAATTG 1 cut(s) 627
MflI RGATCY 1 cut(s) 1498
MhlI GDGCHC 2 cut(s) 37, 609
MlsI TGGCCA 1 cut(s) 1448
MluCI AATT 9 cut(s) 91, 130, 267, 361, 385, 627, 711, 875, 1085
MluNI TGGCCA 1 cut(s) 1448
MlyI GAGTC 1 cut(s) 1228
MmeI TCCRAC 1 cut(s) 1292
Mox20I TGGCCA 1 cut(s) 1448
MroI TCCGGA 1 cut(s) 497
MscI TGGCCA 1 cut(s) 1448
MseI TTAA 3 cut(s) 89, 651, 1564
Msp20I TGGCCA 1 cut(s) 1448
MspCI CTTAAG 1 cut(s) 650
MspI CCGG 5 cut(s) 239, 290, 498, 1220, 1503
MspR9I CCNGG 7 cut(s) 178, 291, 732, 963, 1126, 1503, 1544
MunI CAATTG 1 cut(s) 627
Mva1269I GAATGC 1 cut(s) 1454
MvaI CCWGG 5 cut(s) 178, 732, 963, 1126, 1544
MwoI GCNNNNNNNGC 7 cut(s) 536, 566, 803, 995, 1019, 1247, 1256
NciI CCSGG 2 cut(s) 291, 1503
NcoI CCATGG 1 cut(s) 1449
NdeI CATATG 1 cut(s) 856
NdeII GATC 3 cut(s) 755, 922, 1498
NlaIII CATG 3 cut(s) 1210, 1234, 1453
NlaIV GGNNCC 6 cut(s) 237, 277, 606, 798, 1354, 1500
NmuCI GTSAC 5 cut(s) 108, 640, 895, 1141, 1147
NspV TTCGAA 2 cut(s) 128, 1536
PceI AGGCCT 1 cut(s) 726
PctI GAATGC 1 cut(s) 1454
PfeI GAWTC 1 cut(s) 316
PflMI CCANNNNNTGG 1 cut(s) 1444
PfoI TCCNGGA 3 cut(s) 730, 961, 1542
PkrI GCNGC 7 cut(s) 331, 559, 571, 657, 796, 1021, 1468
PleI GAGTC 1 cut(s) 1228
PpsI GAGTC 1 cut(s) 1228
PpuMI RGGWCCY 1 cut(s) 1154
Psp124BI GAGCTC 1 cut(s) 37
Psp5II RGGWCCY 1 cut(s) 1154
Psp6I CCWGG 5 cut(s) 176, 730, 961, 1124, 1542
PspFI CCCAGC 1 cut(s) 918
PspGI CCWGG 5 cut(s) 176, 730, 961, 1124, 1542
PspN4I GGNNCC 6 cut(s) 237, 277, 606, 798, 1354, 1500
PspPI GGNCC 5 cut(s) 4, 934, 1154, 1265, 1370
PspPPI RGGWCCY 1 cut(s) 1154
PstI CTGCAG 1 cut(s) 1024
PstNI CAGNNNCTG 1 cut(s) 566
PsuI RGATCY 1 cut(s) 1498
RsaI GTAC 2 cut(s) 277, 594
RsaNI GTAC 2 cut(s) 276, 593
SacI GAGCTC 1 cut(s) 37
SalI GTCGAC 1 cut(s) 229
SaqAI TTAA 3 cut(s) 89, 651, 1564
SatI GCNGC 7 cut(s) 330, 558, 570, 656, 795, 1020, 1467
Sau3AI GATC 3 cut(s) 755, 922, 1498
Sau96I GGNCC 5 cut(s) 4, 934, 1154, 1265, 1370
SchI GAGTC 1 cut(s) 1228
ScrFI CCNGG 7 cut(s) 178, 291, 732, 963, 1126, 1503, 1544
SduI GDGCHC 2 cut(s) 37, 609
SfaNI GCATC 3 cut(s) 51, 976, 1206
SfcI CTRYAG 2 cut(s) 1020, 1242
SfuI TTCGAA 2 cut(s) 128, 1536
SgrDI CGTCGACG 1 cut(s) 229
SinI GGWCC 3 cut(s) 934, 1154, 1265
SmlI CTYRAG 1 cut(s) 650
SmoI CTYRAG 1 cut(s) 650
Sse9I AATT 9 cut(s) 91, 130, 267, 361, 385, 627, 711, 875, 1085
SseBI AGGCCT 1 cut(s) 726
SsiI CCGC 2 cut(s) 557, 794
SspI AATATT 1 cut(s) 773
SspMI CTAG 4 cut(s) 368, 585, 999, 1010
SstI GAGCTC 1 cut(s) 37
StuI AGGCCT 1 cut(s) 726
StyD4I CCNGG 7 cut(s) 176, 289, 730, 961, 1124, 1501, 1542
StyI CCWWGG 2 cut(s) 520, 1449
TaaI ACNGT 9 cut(s) 235, 352, 677, 901, 1039, 1045, 1147, 1360, 1382
TaiI ACGT 1 cut(s) 1482
TaqI TCGA 5 cut(s) 128, 230, 925, 978, 1536
TasI AATT 9 cut(s) 91, 130, 267, 361, 385, 627, 711, 875, 1085
TatI WGTACW 1 cut(s) 592
TauI GCSGC 2 cut(s) 560, 797
TfiI GAWTC 1 cut(s) 316
Tru1I TTAA 3 cut(s) 89, 651, 1564
Tru9I TTAA 3 cut(s) 89, 651, 1564
TscAI CASTG 3 cut(s) 649, 906, 1363
TseFI GTSAC 5 cut(s) 108, 640, 895, 1141, 1147
TseI GCWGC 5 cut(s) 329, 569, 655, 1019, 1466
Tsp45I GTSAC 5 cut(s) 108, 640, 895, 1141, 1147
TspDTI ATGAA 2 cut(s) 164, 1223
TspRI CASTG 3 cut(s) 649, 906, 1363
Van91I CCANNNNNTGG 1 cut(s) 1444
Vha464I CTTAAG 1 cut(s) 650
VpaK11BI GGWCC 3 cut(s) 934, 1154, 1265
XapI RAATTY 4 cut(s) 91, 130, 267, 1085
XcmI CCANNNNNNNNNTGG 1 cut(s) 1282
XmiI GTMKAC 2 cut(s) 230, 357
XspI CTAG 4 cut(s) 368, 585, 999, 1010
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.