Rw1G022420

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
Physical Location & Seq
Reverse (-)
47460875 .. 47462362
1488 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G022420.1

Sequence Viewer

Length: 1488 bp
ATGGTAGGGCCGGATTTCCCAAAATGGCTTCGAACCCAAAAATATCTTTCCTACCTTGACATGTCTGATGGTGACATTTCAGATGTCCTTCCAAGTTGGTTCTGGGGTCTACTTCATGACGTTTCGACTATAGATCTGTCTAACAATCAAATTAGAAGAACATTAGGGAGTTCAGAGGCTGTATCAGTCAACGGAGTTGAAGTTCGGTTTAGTTCGAACCAGTTGGAAGGTCTAGTGCTCCCATTTCTATCAAATGCGAAATATTTGGATCTATCTGATAATAAATTTTCAGAGGTGATCACTTCCTTCTTGTGTTCGTCAAATGTTAAAATTTCCATATTTCTTGATCTCTCCACTAACCATATTTCTGGAGAACTTCCAGATTGCTGGAGACACTGGGTCAATCTAGAACTTCTTGATTTGAGTAACAATTCTTTTTCTGGGAAAATTCCACCAAGTATAAGATGTTTAGTTCGAATCGAAACATTGAAATTAAGGAGCAACAGACTTGTGGGAGAATTGCCTTCATTCTTGAAGAATTGTACAAGCTTAAATGTTATTGATCTTGGGAACAATAAGCTTTCAAGTTCAGTGCCTGAATGGTTAGGGGTCAGTCTTCCAAATTTGGTTATTCTTATGCTTCAATCCAATCAGCTTAGTGGAAGTTTGCCTTCACAATTATGCCATCTAGCACACCTTCAAATTTTGGACGTCTCTGTAAATGAAATCTCTGGAACTATACCAAAATGCCTCGATAGTTTGACTTCTTTGGCTCAAGAAGGAAATACAAATCTAACCATCAGACATTCGTTTAATATGTCTAATTTTGAAGGAAATATGACCTCTCTTTATTATGAGGATGATGCAACCTTCATGTGGAAAGGAATAATGTCTTCATATAAAAACACTCTGGGGCTAGTCAAGAGAATTGATCTCTCAAGCAACAGATTAACTGGAGAGATTCCAAGTGAAATCACTCATCTTGTTGGGCTCGTTTCTCTGAATCTTTCAAGGAACAATTTGACTGGACAAATACCTCTAGAGATCGGAAAGTTGAAGTCACTAGATTCTTTTGATTTGTCTAGCAACAAGATAGGTGGCAGGATTCCGACAAGCCTTGCTCATATCAATAGACTTACTTACATGAATTTATCATATAACAACTTGTCTGGTGAAATTCCAACTGGTACTCAGCTCCAGAGCTTTGATCCCTCTTTCTATGCCGGAAATCCTCAATTGTGTGGACGTCCACTTGAAGCTTGTAATCCAGAGGGAACTGGTCGGCCAAATGTCTCGAGTGATCAAGCAGATCCAAATGAGCTCATCACACCGGGCTTTTACATAAGTCTGGGACTTGGATTTGCTGTTGGATTCTGGGTTGTCTGTGGGAGCTTGATATTCAAGCGATCATGGAGATATGCATACTACAACTTCTTGAATGCTTTAAATGATTGGCTTTATGTGAGGGTAGCTTTGATCAGACGGTAA

Protein Analysis

495

Amino Acids

55.05

Weight (kDa)

5.94

Isoelectric Point (pI)

43.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_8 PF13855 115 - 170 3.1e-06 Leucine rich repeat
LRR_8 PF13855 160 - 219 2e-06 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000028)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g45420 FvH4_4g14031 FvH4_5g20780 FvH4_6g28530 FvH4_7g14020 FvH4_7g14030 FvH4_7g14040 FvH4_7g14050 FvH4_7g14060 FvH4_7g14070 FvH4_7g14090 FvH4_7g14110 FvH4_7g14140 FvH4_7g14450
malus_domestica MD00G1189100.v1.1 MD01G1018600.v1.1 MD01G1053800.v1.1 MD01G1053900.v1.1 MD01G1054000.v1.1 MD01G1054100.v1.1 MD01G1056700.v1.1 MD01G1057000.v1.1 MD01G1057300.v1.1 MD01G1057400.v1.1 MD01G1061600.v1.1 MD01G1061800.v1.1 MD01G1061900.v1.1 MD01G1062000.v1.1 MD01G1062400.v1.1 MD01G1062500.v1.1 MD01G1063200.v1.1 MD01G1063300.v1.1 MD01G1063400.v1.1 MD01G1063700.v1.1 MD01G1063900.v1.1 MD01G1064200.v1.1 MD01G1064300.v1.1 MD01G1064400.v1.1 MD01G1064600.v1.1 MD01G1064700.v1.1 MD01G1181100.v1.1 MD01G1212300.v1.1 MD01G1212500.v1.1 MD01G1212600.v1.1 MD02G1271900.v1.1 MD07G1136500.v1.1 MD07G1139300.v1.1 MD07G1141200.v1.1 MD07G1144700.v1.1 MD08G1144200.v1.1 MD14G1186300.v1.1 MD14G1186500.v1.1 MD14G1186700.v1.1 MD14G1186800.v1.1 MD15G1351300.v1.1 MD15G1439500.v1.1
prunus_persica Prupe.1G067000_v2.0.a1 Prupe.2G077400_v2.0.a1 Prupe.2G077700_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078600_v2.0.a1 Prupe.2G078800_v2.0.a1 Prupe.2G099600_v2.0.a1 Prupe.2G099700_v2.0.a1 Prupe.2G155100_v2.0.a1 Prupe.2G155500_v2.0.a1 Prupe.2G155600_v2.0.a1 Prupe.2G155800_v2.0.a1 Prupe.2G155900_v2.0.a1 Prupe.2G156100_v2.0.a1 Prupe.2G166100_v2.0.a1 Prupe.2G166300_v2.0.a1 Prupe.2G167500_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G168400_v2.0.a1 Prupe.2G168700_v2.0.a1 Prupe.2G168800_v2.0.a1 Prupe.2G169000_v2.0.a1 Prupe.2G169100_v2.0.a1 Prupe.2G169200_v2.0.a1 Prupe.2G169500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G172300_v2.0.a1 Prupe.2G304800_v2.0.a1 Prupe.4G264800_v2.0.a1 Prupe.4G265000_v2.0.a1 Prupe.5G051900_v2.0.a1 Prupe.5G052000_v2.0.a1
pyrus_communis pycom01g08380 pycom01g08430 pycom01g08490 pycom01g08520 pycom01g08540 pycom01g08550 pycom01g08600 pycom01g08630 pycom01g08660 pycom01g08720 pycom01g09180 pycom01g09200 pycom01g09210 pycom01g09270 pycom01g09280 pycom01g09300 pycom01g09380 pycom01g19110 pycom01g22260 pycom01g22310 pycom01g22330 pycom01g22350 pycom01g22360 pycom02g23250 pycom07g13420 pycom07g13670 pycom07g13900 pycom07g13910 pycom07g13960 pycom07g13970 pycom07g25680 pycom11g22830
rosa_chinensis RchiOBHm_Chr0c22g0500431 RchiOBHm_Chr0c22g0500441 RchiOBHm_Chr0c22g0500561 RchiOBHm_Chr0c22g0500571 RchiOBHm_Chr0c22g0500611 RchiOBHm_Chr0c22g0500621 RchiOBHm_Chr0c22g0500631 RchiOBHm_Chr0c22g0500681 RchiOBHm_Chr1g0348221 RchiOBHm_Chr1g0348251 RchiOBHm_Chr1g0352861 RchiOBHm_Chr1g0352871 RchiOBHm_Chr1g0352891 RchiOBHm_Chr1g0352901 RchiOBHm_Chr1g0354671 RchiOBHm_Chr1g0354701 RchiOBHm_Chr1g0354711 RchiOBHm_Chr1g0354751 RchiOBHm_Chr1g0354761 RchiOBHm_Chr1g0354841 RchiOBHm_Chr1g0354851 RchiOBHm_Chr1g0354881 RchiOBHm_Chr1g0354971 RchiOBHm_Chr1g0354981 RchiOBHm_Chr1g0354991 RchiOBHm_Chr1g0355001 RchiOBHm_Chr1g0355011 RchiOBHm_Chr1g0355021 RchiOBHm_Chr1g0355861 RchiOBHm_Chr1g0379671 RchiOBHm_Chr1g0379681 RchiOBHm_Chr2g0096591 RchiOBHm_Chr2g0132821 RchiOBHm_Chr3g0454901 RchiOBHm_Chr3g0472711 RchiOBHm_Chr4g0400791 RchiOBHm_Chr5g0069481 RchiOBHm_Chr5g0069511 RchiOBHm_Chr5g0069551 RchiOBHm_Chr6g0254651 RchiOBHm_Chr6g0259721 RchiOBHm_Chr7g0205911 RchiOBHm_Chr7g0206401 RchiOBHm_Chr7g0206571 RchiOBHm_Chr7g0206581 RchiOBHm_Chr7g0206621 RchiOBHm_Chr7g0206631 RchiOBHm_Chr7g0206641 RchiOBHm_Chr7g0206681 RchiOBHm_Chr7g0206691 RchiOBHm_Chr7g0206751 RchiOBHm_Chr7g0206761 RchiOBHm_Chr7g0206851 RchiOBHm_Chr7g0206911 RchiOBHm_Chr7g0206921 RchiOBHm_Chr7g0207001 RchiOBHm_Chr7g0207011 RchiOBHm_Chr7g0207031 RchiOBHm_Chr7g0207101 RchiOBHm_Chr7g0207161 RchiOBHm_Chr7g0207201 RchiOBHm_Chr7g0207271 RchiOBHm_Chr7g0207301 RchiOBHm_Chr7g0207311 RchiOBHm_Chr7g0207421 RchiOBHm_Chr7g0207481 RchiOBHm_Chr7g0207491 RchiOBHm_Chr7g0207501 RchiOBHm_Chr7g0207521 RchiOBHm_Chr7g0207531 RchiOBHm_Chr7g0207561 RchiOBHm_Chr7g0207571 RchiOBHm_Chr7g0207581 RchiOBHm_Chr7g0207601 RchiOBHm_Chr7g0207621 RchiOBHm_Chr7g0207631 RchiOBHm_Chr7g0207651 RchiOBHm_Chr7g0207661 RchiOBHm_Chr7g0207711 RchiOBHm_Chr7g0207761 RchiOBHm_Chr7g0207801 RchiOBHm_Chr7g0208821 RchiOBHm_Chr7g0208831 RchiOBHm_Chr7g0208841 RchiOBHm_Chr7g0213601 RchiOBHm_Chr7g0215981 RchiOBHm_Chr7g0216021
rosa_laevigata RLG00000003193 RLG00000003194 RLG00000003287 RLG00000003288 RLG00000003289 RLG00000003293 RLG00000003294 RLG00000003295 RLG00000003297 RLG00000003299 RLG00000003301 RLG00000003327 RLG00000003347 RLG00000016653 RLG00000018642 RLG00000018643 RLG00000019285 RLG00000022542 RLG00000026368 RLG00000026371 RLG00000028124 RLG00000028125 RLG00000028183 RLG00000028184 RLG00000028185 RLG00000028188 RLG00000028673 RLG00000029267 RLG00000029325 RLG00000029674 RLG00000032883 RLG00000036055 RLG00000036058 RLG00000036065 RLG00000036068 RLG00000036071 RLG00000036072 RLG00000036075 RLG00000036076
rosa_multiflora Rmu_co8250183.1_g000001 Rmu_co8271981.1_g000001 Rmu_co8410829.1_g000001 Rmu_co8432879.1_g000001 Rmu_co8441941.1_g000001 Rmu_sc0000076.1_g000031 Rmu_sc0000738.1_g000038 Rmu_sc0000848.1_g000003 Rmu_sc0000848.1_g000014 Rmu_sc0000848.1_g000015 Rmu_sc0000848.1_g000016 Rmu_sc0001264.1_g000001 Rmu_sc0002284.1_g000018 Rmu_sc0002356.1_g000011 Rmu_sc0003020.1_g000003 Rmu_sc0003115.1_g000001 Rmu_sc0003115.1_g000002 Rmu_sc0003115.1_g000003 Rmu_sc0003115.1_g000004 Rmu_sc0003115.1_g000005 Rmu_sc0003115.1_g000008 Rmu_sc0003115.1_g000010 Rmu_sc0003115.1_g000011 Rmu_sc0003115.1_g000014 Rmu_sc0003565.1_g000002 Rmu_sc0003652.1_g000013 Rmu_sc0003652.1_g000015 Rmu_sc0003652.1_g000016 Rmu_sc0003652.1_g000019 Rmu_sc0003940.1_g000001 Rmu_sc0003940.1_g000004 Rmu_sc0003940.1_g000009 Rmu_sc0004084.1_g000010 Rmu_sc0004705.1_g000021 Rmu_sc0004972.1_g000007 Rmu_sc0004987.1_g000002 Rmu_sc0004987.1_g000006 Rmu_sc0005065.1_g000018 Rmu_sc0005065.1_g000029 Rmu_sc0005391.1_g000002 Rmu_sc0005633.1_g000003 Rmu_sc0005633.1_g000008 Rmu_sc0006632.1_g000014 Rmu_sc0006632.1_g000018 Rmu_sc0006681.1_g000010 Rmu_sc0006681.1_g000011 Rmu_sc0006733.1_g000003 Rmu_sc0007385.1_g000005 Rmu_sc0007385.1_g000007 Rmu_sc0007385.1_g000009 Rmu_sc0007385.1_g000016 Rmu_sc0007645.1_g000002 Rmu_sc0007645.1_g000003 Rmu_sc0007645.1_g000022 Rmu_sc0007828.1_g000008 Rmu_sc0008509.1_g000003 Rmu_sc0008509.1_g000015 Rmu_sc0008509.1_g000016 Rmu_sc0008509.1_g000020 Rmu_sc0008509.1_g000030 Rmu_sc0008509.1_g000041 Rmu_sc0008756.1_g000001 Rmu_sc0008756.1_g000003 Rmu_sc0013028.1_g000002 Rmu_sc0013028.1_g000003 Rmu_sc0013028.1_g000005 Rmu_sc0013160.1_g000001 Rmu_sc0014454.1_g000009 Rmu_sc0014455.1_g000007 Rmu_sc0014659.1_g000004 Rmu_sc0017798.1_g000002 Rmu_sc0017798.1_g000004 Rmu_sc0029608.1_g000001 Rmu_sc0037861.1_g000001 Rmu_sc0038750.1_g000001 Rmu_sc0042995.1_g000001 Rmu_ssc0000161.1_g000017
rosa_roxburghii Rroxscaffold_1G00009180 Rroxscaffold_1G00009190 Rroxscaffold_1G00011450 Rroxscaffold_1G00011480 Rroxscaffold_2G00111660 Rroxscaffold_2G00113570 Rroxscaffold_2G00122140 Rroxscaffold_3G00243730 Rroxscaffold_3G00245750 Rroxscaffold_3G00245760 Rroxscaffold_3G00250220 Rroxscaffold_3G00251160 Rroxscaffold_3G00251270 Rroxscaffold_3G00251280 Rroxscaffold_3G00251300 Rroxscaffold_3G00251340 Rroxscaffold_3G00251350 Rroxscaffold_3G00251390 Rroxscaffold_3G00251400 Rroxscaffold_3G00251560 Rroxscaffold_3G00251570 Rroxscaffold_3G00251870 Rroxscaffold_3G00252200 Rroxscaffold_3G00252210 Rroxscaffold_4G00279970 Rroxscaffold_4G00299970 Rroxscaffold_4G00300760 Rroxscaffold_4G00300780 Rroxscaffold_4G00300810 Rroxscaffold_4G00300850 Rroxscaffold_4G00307080 Rroxscaffold_4G00307100 Rroxscaffold_4G00313990 Rroxscaffold_6G00405080
rosa_rugosa Rorug01G0193600 Rorug01G0193700 Rorug01G0243800 Rorug01G0244000 Rorug01G0244000 Rorug01G0244400 Rorug01G0414300.1 Rorug01G0414500 Rorug01G0414600 Rorug02G0235600 Rorug02G0307900 Rorug02G0583100 Rorug02G0583200 Rorug02G0583300 Rorug05G0398000 Rorug05G0398100 Rorug05G0398200 Rorug05G0580300 Rorug05G0590300 Rorug06G0116000 Rorug06G0116100 Rorug07G0096800 Rorug07G0097100.1 Rorug07G0097200 Rorug07G0098600 Rorug07G0098600 Rorug07G0098700 Rorug07G0099100 Rorug07G0106100 Rorug07G0106200 Rorug07G0106200 Rorug07G0106300 Rorug07G0157600 Rorug07G0157700 Rorug07G0157700 Rorug07G0157800
rosa_samantha Rh1AG255500 Rh1AG256700 Rh1BG225800 Rh1BG226200 Rh1BG230000 Rh1CG195300 Rh1CG238400 Rh1CG238500 Rh1CG238900 Rh1CG239000 Rh1CG239300 Rh1CG239400 Rh1CG239800 Rh1CG240000 Rh1CG240200 Rh1CG240300 Rh1CG244300 Rh1CG406900 Rh1CG407300 Rh1CG407400 Rh2CG343600 Rh2DG383200 Rh3BG205900 Rh4AG404400 Rh4BG415500 Rh5AG455200 Rh5AG455600 Rh5CG497000 Rh5CG497200 Rh7AG228800 Rh7AG230400 Rh7AG230800 Rh7AG231200 Rh7AG231600 Rh7AG231800 Rh7AG232100 Rh7AG241600 Rh7BG236200 Rh7CG238200 Rh7CG239100 Rh7CG243400 Rh7CG244900
rosa_wichuraiana Rw0G023040 Rw1G017780 Rw1G022320 Rw1G022340 Rw1G022410 Rw1G022420 Rw1G022440 Rw1G022460 Rw1G022490 Rw1G022500 Rw1G022530 Rw1G022550 Rw1G022560 Rw1G022600 Rw1G023060 Rw1G038150 Rw1G038160 Rw2G008210 Rw2G022350 Rw2G029290 Rw4G015050 Rw4G019850 Rw5G024060 Rw5G042460 Rw7G019160 Rw7G019460 Rw7G019690 Rw7G019830 Rw7G019860 Rw7G019880 Rw7G019890 Rw7G019930 Rw7G019990 Rw7G020460 Rw7G025100 Rw7G025120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 714, 1249
AccI GTMKAC 1 cut(s) 109
AclWI GGATC 3 cut(s) 276, 1202, 1304
AcoI YGGCCR 1 cut(s) 1283
AcsI RAATTY 7 cut(s) 284, 330, 447, 622, 702, 1147, 1176
AcyI GRCGYC 2 cut(s) 711, 1246
AfaI GTAC 2 cut(s) 544, 1189
AfiI CCNNNNNNNGG 1 cut(s) 876
AflIII ACRYGT 1 cut(s) 60
AhdI GACNNNNNGTC 1 cut(s) 398
AloI GAACNNNNNNTCC 2 cut(s) 186, 218
AluBI AGCT 9 cut(s) 549, 580, 655, 1195, 1203, 1259, 1321, 1392, 1472
AluI AGCT 9 cut(s) 549, 580, 655, 1195, 1203, 1259, 1321, 1392, 1472
Alw21I GWGCWC 2 cut(s) 240, 1323
Alw26I GTCTC 3 cut(s) 385, 718, 1297
AlwI GGATC 3 cut(s) 276, 1202, 1304
AlwNI CAGNNNCTG 2 cut(s) 179, 596
Ama87I CYCGRG 1 cut(s) 1294
AoxI GGCC 2 cut(s) 8, 1283
ApoI RAATTY 7 cut(s) 284, 330, 447, 622, 702, 1147, 1176
AspS9I GGNCC 1 cut(s) 8
AsuC2I CCSGG 1 cut(s) 1332
AsuHPI GGTGA 3 cut(s) 83, 307, 1184
AsuII TTCGAA 3 cut(s) 31, 215, 475
AvaI CYCGRG 1 cut(s) 1294
BanII GRGCYC 2 cut(s) 993, 1323
BbsI GAAGAC 2 cut(s) 608, 885
Bbv12I GWGCWC 2 cut(s) 240, 1323
BccI CCATC 3 cut(s) 62, 693, 806
BclI TGATCA 3 cut(s) 297, 1300, 1476
BcnI CCSGG 1 cut(s) 1332
BcoDI GTCTC 3 cut(s) 385, 718, 1297
BfaI CTAG 7 cut(s) 233, 407, 689, 917, 1040, 1064, 1083
BfmI CTRYAG 1 cut(s) 129
BglII AGATCT 1 cut(s) 133
Bme1390I CCNGG 1 cut(s) 1332
BmeRI GACNNNNNGTC 1 cut(s) 398
BmeT110I CYCGRG 1 cut(s) 1294
BmgT120I GGNCC 1 cut(s) 8
BmrFI CCNGG 1 cut(s) 1332
BmrI ACTGGG 1 cut(s) 406
BmsI GCATC 1 cut(s) 853
BmuI ACTGGG 1 cut(s) 406
BpiI GAAGAC 2 cut(s) 608, 885
BpmI CTGGAG 4 cut(s) 390, 409, 975, 1181
Bpu14I TTCGAA 3 cut(s) 31, 215, 475
BpuEI CTTGAG 2 cut(s) 759, 922
BpuMI CCSGG 1 cut(s) 1332
BsaHI GRCGYC 2 cut(s) 711, 1246
BsaXI ACNNNNNCTCC 2 cut(s) 186, 216
Bsc4I CCNNNNNNNGG 1 cut(s) 876
Bse1I ACTGG 6 cut(s) 220, 401, 958, 1030, 1189, 1282
BseGI GGATG 1 cut(s) 865
BseLI CCNNNNNNNGG 1 cut(s) 876
BseMII CTCAG 1 cut(s) 1205
BseNI ACTGG 6 cut(s) 220, 401, 958, 1030, 1189, 1282
BshFI GGCC 2 cut(s) 10, 1285
BsiHKAI GWGCWC 2 cut(s) 240, 1323
BsiHKCI CYCGRG 1 cut(s) 1294
BsiSI CCGG 3 cut(s) 11, 1224, 1331
BslFI GGGAC 1 cut(s) 1365
BslI CCNNNNNNNGG 1 cut(s) 876
BsmAI GTCTC 3 cut(s) 385, 718, 1297
BsmBI CGTCTC 1 cut(s) 718
BsmFI GGGAC 1 cut(s) 1365
BsmI GAATGC 1 cut(s) 1444
BsnI GGCC 2 cut(s) 10, 1285
BsoBI CYCGRG 1 cut(s) 1294
Bsp119I TTCGAA 3 cut(s) 31, 215, 475
Bsp1286I GDGCHC 3 cut(s) 240, 993, 1323
Bsp1407I TGTACA 1 cut(s) 542
BspANI GGCC 2 cut(s) 10, 1285
BspCNI CTCAG 1 cut(s) 1204
BspHI TCATGA 1 cut(s) 115
BspPI GGATC 3 cut(s) 276, 1202, 1304
BspT104I TTCGAA 3 cut(s) 31, 215, 475
BsrGI TGTACA 1 cut(s) 542
BsrI ACTGG 6 cut(s) 220, 401, 958, 1030, 1189, 1282
BssNI GRCGYC 2 cut(s) 711, 1246
Bst4CI ACNGT 1 cut(s) 1485
BstACI GRCGYC 2 cut(s) 711, 1246
BstAUI TGTACA 1 cut(s) 542
BstBI TTCGAA 3 cut(s) 31, 215, 475
BstDEI CTNAG 2 cut(s) 656, 1191
BstF5I GGATG 1 cut(s) 865
BstMAI GTCTC 3 cut(s) 385, 718, 1297
BstNSI RCATGY 1 cut(s) 64
BstSCI CCNGG 1 cut(s) 1330
BstSFI CTRYAG 1 cut(s) 129
BstV2I GAAGAC 2 cut(s) 608, 885
BstX2I RGATCY 3 cut(s) 133, 268, 1309
BstXI CCANNNNNNTGG 2 cut(s) 368, 387
BstYI RGATCY 3 cut(s) 133, 268, 1309
BsuRI GGCC 2 cut(s) 10, 1285
BtsCI GGATG 1 cut(s) 865
BtsIMutI CAGTG 2 cut(s) 394, 597
CaiI CAGNNNCTG 2 cut(s) 179, 596
CciI TCATGA 1 cut(s) 115
Cfr13I GGNCC 1 cut(s) 8
Csp6I GTAC 2 cut(s) 543, 1188
CspCI CAANNNNNGTGG 2 cut(s) 1078, 1113
CviAII CATG 5 cut(s) 61, 116, 874, 1144, 1410
CviQI GTAC 2 cut(s) 543, 1188
DdeI CTNAG 2 cut(s) 656, 1191
DraI TTTAAA 1 cut(s) 1446
DriI GACNNNNNGTC 1 cut(s) 398
EaeI YGGCCR 1 cut(s) 1283
Eam1105I GACNNNNNGTC 1 cut(s) 398
Ecl136II GAGCTC 1 cut(s) 1321
Eco24I GRGCYC 2 cut(s) 993, 1323
Eco53kI GAGCTC 1 cut(s) 1321
Eco88I CYCGRG 1 cut(s) 1294
EcoICRI GAGCTC 1 cut(s) 1321
EcoT22I ATGCAT 1 cut(s) 1423
EcoT38I GRGCYC 2 cut(s) 993, 1323
Esp3I CGTCTC 1 cut(s) 718
FaeI CATG 5 cut(s) 64, 119, 877, 1147, 1413
FalI AAGNNNNNCTT 2 cut(s) 655, 687
FaqI GGGAC 1 cut(s) 1365
FatI CATG 5 cut(s) 60, 115, 873, 1143, 1409
FbaI TGATCA 3 cut(s) 297, 1300, 1476
FblI GTMKAC 1 cut(s) 109
FokI GGATG 1 cut(s) 872
FriOI GRGCYC 2 cut(s) 993, 1323
FspBI CTAG 7 cut(s) 233, 407, 689, 917, 1040, 1064, 1083
GsuI CTGGAG 4 cut(s) 390, 409, 975, 1181
HaeIII GGCC 2 cut(s) 10, 1285
HapII CCGG 3 cut(s) 11, 1224, 1331
Hin1I GRCGYC 2 cut(s) 711, 1246
Hin1II CATG 5 cut(s) 64, 119, 877, 1147, 1413
HincII GTYRAC 1 cut(s) 190
HindII GTYRAC 1 cut(s) 190
HindIII AAGCTT 3 cut(s) 547, 578, 1257
HinfI GANTC 6 cut(s) 477, 961, 1003, 1067, 1105, 1371
HpaII CCGG 3 cut(s) 11, 1224, 1331
HphI GGTGA 3 cut(s) 83, 307, 1184
Hpy166II GTNNAC 4 cut(s) 110, 190, 1244, 1250
Hpy8I GTNNAC 4 cut(s) 110, 190, 1244, 1250
HpyAV CCTTC 9 cut(s) 98, 221, 316, 534, 681, 707, 773, 824, 880
HpyCH4III ACNGT 1 cut(s) 1485
HpyCH4IV ACGT 3 cut(s) 120, 711, 1246
HpyCH4V TGCA 2 cut(s) 866, 1421
HpyF3I CTNAG 2 cut(s) 656, 1191
HpySE526I ACGT 3 cut(s) 120, 711, 1246
Hsp92I GRCGYC 2 cut(s) 711, 1246
Hsp92II CATG 5 cut(s) 64, 119, 877, 1147, 1413
Ksp22I TGATCA 3 cut(s) 297, 1300, 1476
LmnI GCTCC 4 cut(s) 243, 498, 1200, 1389
LweI GCATC 1 cut(s) 853
MaeI CTAG 7 cut(s) 233, 407, 689, 917, 1040, 1064, 1083
MaeII ACGT 3 cut(s) 120, 711, 1246
MaeIII GTNAC 3 cut(s) 71, 425, 1059
MboII GAAGA 4 cut(s) 168, 547, 608, 885
MfeI CAATTG 1 cut(s) 1235
MflI RGATCY 3 cut(s) 133, 268, 1309
MhlI GDGCHC 3 cut(s) 240, 993, 1323
MmeI TCCRAC 4 cut(s) 204, 1133, 1205, 1348
Mph1103I ATGCAT 1 cut(s) 1423
MseI TTAA 6 cut(s) 327, 494, 551, 813, 950, 1445
MslI CAYNNNNRTG 1 cut(s) 679
MspI CCGG 3 cut(s) 11, 1224, 1331
MspR9I CCNGG 1 cut(s) 1332
MunI CAATTG 1 cut(s) 1235
Mva1269I GAATGC 1 cut(s) 1444
NciI CCSGG 1 cut(s) 1332
NlaIII CATG 5 cut(s) 64, 119, 877, 1147, 1413
NmuCI GTSAC 2 cut(s) 71, 1059
NsiI ATGCAT 1 cut(s) 1423
NspI RCATGY 1 cut(s) 64
NspV TTCGAA 3 cut(s) 31, 215, 475
PaeR7I CTCGAG 1 cut(s) 1294
PagI TCATGA 1 cut(s) 115
PciI ACATGT 1 cut(s) 60
PctI GAATGC 1 cut(s) 1444
PfeI GAWTC 6 cut(s) 477, 961, 1003, 1067, 1105, 1371
PscI ACATGT 1 cut(s) 60
Psp124BI GAGCTC 1 cut(s) 1323
PspPI GGNCC 1 cut(s) 8
PstNI CAGNNNCTG 2 cut(s) 179, 596
PsuI RGATCY 3 cut(s) 133, 268, 1309
RsaI GTAC 2 cut(s) 544, 1189
RsaNI GTAC 2 cut(s) 543, 1188
RseI CAYNNNNRTG 1 cut(s) 679
SacI GAGCTC 1 cut(s) 1323
SaqAI TTAA 6 cut(s) 327, 494, 551, 813, 950, 1445
Sau96I GGNCC 1 cut(s) 8
ScrFI CCNGG 1 cut(s) 1332
SduI GDGCHC 3 cut(s) 240, 993, 1323
SfaNI GCATC 1 cut(s) 853
SfcI CTRYAG 1 cut(s) 129
Sfr274I CTCGAG 1 cut(s) 1294
SfuI TTCGAA 3 cut(s) 31, 215, 475
SlaI CTCGAG 1 cut(s) 1294
SmiMI CAYNNNNRTG 1 cut(s) 679
SmlI CTYRAG 3 cut(s) 774, 937, 1294
SmoI CTYRAG 3 cut(s) 774, 937, 1294
SspI AATATT 1 cut(s) 263
SspMI CTAG 7 cut(s) 233, 407, 689, 917, 1040, 1064, 1083
SstI GAGCTC 1 cut(s) 1323
StyD4I CCNGG 1 cut(s) 1330
TaaI ACNGT 1 cut(s) 1485
TaiI ACGT 3 cut(s) 123, 714, 1249
TaqI TCGA 7 cut(s) 31, 125, 215, 475, 480, 753, 1295
TatI WGTACW 1 cut(s) 542
TfiI GAWTC 6 cut(s) 477, 961, 1003, 1067, 1105, 1371
Tru1I TTAA 6 cut(s) 327, 494, 551, 813, 950, 1445
Tru9I TTAA 6 cut(s) 327, 494, 551, 813, 950, 1445
TscAI CASTG 2 cut(s) 401, 597
TseFI GTSAC 2 cut(s) 71, 1059
Tsp45I GTSAC 2 cut(s) 71, 1059
TspDTI ATGAA 6 cut(s) 104, 516, 738, 862, 885, 1160
TspGWI ACGGA 1 cut(s) 207
TspRI CASTG 2 cut(s) 401, 597
XapI RAATTY 7 cut(s) 284, 330, 447, 622, 702, 1147, 1176
XbaI TCTAGA 2 cut(s) 406, 1039
XceI RCATGY 1 cut(s) 64
XcmI CCANNNNNNNNNTGG 1 cut(s) 99
XhoI CTCGAG 1 cut(s) 1294
XmiI GTMKAC 1 cut(s) 109
XspI CTAG 7 cut(s) 233, 407, 689, 917, 1040, 1064, 1083
ZraI GACGTC 2 cut(s) 712, 1247
Zsp2I ATGCAT 1 cut(s) 1423
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.