RchiOBHm_Chr1g0354881

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
Physical Location & Seq
Reverse (-)
47672249 .. 47675836
3588 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ58040

Sequence Viewer

Length: 3363 bp
ATGGAGTTGGGAAGGTGGCTCAAACATGCTTATGCAATATCAATTGTGCTTCTTCTGCATATCAACGCTTCCTTATCCCTTGGCCACCACCATGCTAACGTGACGGCAAGATGCCTAGAGAGGGAGAGGGATGCACTCCTTGCTATCAAAGGAGACCTGGTGGATGAATACAACCTGCTCTCTTCATGGGGAAGCGAAGCCAAAAAGCGAGACTGTTGCGGATGGGAAAGAGTCCACTGCGATCACCAGACTGGCCATGTTATTCAACTTCATCTGAATGGAGAACCGTTGTTGACCTATTTGCAAGGTGAGATTAGTCCTAAAATCATTGAGTTACAGCATTTGGAATATTTGGACCTCAGTCACAATCCCTTCAGGCAAATTCCAGCAATCATTTGTTCTTTATTCAATTTAAGACACCTAGATCTCAGTTTCAATTTCATTGGCTTCTCTAGGAGCAAAATTCCGGAGCTCATTGGTAACTTGACCAATTTAAGATATCTAGATATGTCTGCCAATTTTCTAGGTGATGAAACTCCATATCATCAGCTTGGAAACCTTACTCACTTGCAGTATCTCAATCTCGGGTATAATGACATCACTCATGGTGTAGAAAACCTCCATTGGCTCCCACATCTTTCATCATTAAAATACCTGGACCTGAGTTCTACCAATCTAATTAAGGTTTCTGATTGGCTGGAAACAATAAACAAGCTCCCCAATTTAAGAAATTTGACCTTGAGATTATGTAGTCTTCCTCCTCCAACTCTTTCCACTCTTTCTCACATAAATTCTTCCAATTCTCTTGTAAGTGTTGATTTGTCCAAAAATCCTGCTGTCAGTTCTTCAATATTCAAATGGTTGTGCAACTACAATACCACCCTTGTTCATATTGACCTCTCTTTCAACCAATTAAGTGGTTTGATTTCGAATGCTTTCAGTAACATGAGCTCACTTGCATATCTTGACCTCTCTTCCAACCAATTAAGTGGTTTGATTCCAGATGTCTTCAAAAACAAGAGCTCACTTGCATATCTTGACCTCTCTAATAACCAACTTGAAGGAGGAATCCCAGCATCCATTGGCCAGTTATGTAATTTGCGAACCTTGGCCATTTCAGACAATAGGTTACATGGACAGTTCTCTGAATTTGTTCAAACTTTGTCTATTTGTACTCAAAACTCATTGGAGAGATTGTATCTATCTCAAAATGATCTTGCTGGGTCATTGCCTAATCTTGCAAACTTTCAATCATTGAAGGAATTATATCTCTCTGAAAACCAGTTGAGTGGAATCATTCCTGATAGTATTGGAAAGTTGTCTTCATTGAAGACATTAGATCTCGAAGAAAATAGGCTAAGCGGAATGATACCGGAGAGTATTGGGCAAATGTCATTGTTGAGAGAGTTGTATCTACAGGGAAACCAACTTAGTGGAATGATACCAGAGAGTATTGGGCAAATGTCAATGTTGATAGAGTTGTATCTACAGGGAAACCAACTTAGTGGGATGATACCGGAGAGTATTGGGAAATTGTCAGCCTTGCATAAATTAGACCTCTCCGGTAATCGATTAAACGGGACAGTACCTAAAAGTATTGGACAATGCTCAGAATTGTCCAATATGAATCTTAGTAAGAATTCTTTAGAAGGGGTAATTTCGGAAGTTCATTTTTCAAAATTGTCTGCACTGGAGGCATTGGATTTATCCTATAACCCATTAGTTTTCAATGTCAATTCTGACTGGGTTCCTCCTTTTCAATTGGGCTCTCTAAGTTTGAGGTCTTGCCAGATGGGGACATATTTCCCAAACTGGCTTCGAACTCAACAAAGTCTTTCCAAACTTGATATCTCCTATGCTGGAATTTCAAATGTCCTTCCAAGTTGGTTCTGGAGTCTCTTTGGTAACATTCATGCAATAGATCTCTCTCATAATCAACTTAGAGGAACATTTGAGAGTTCAAAATTGAAGGTTTCATCATCATATGAAGTTGAAGTTCATTTTGGTTCGAACCAATTCGAAGGTTCAATACCGTCAAGTTTATTAGCTGCGTCATATTTGGATCTCTCCAATAATAAGTTCTCAGACATGACATCCTTGTGTGTTACTTCAGAGCTTCAGAGTTTAAAGTTTCTTAATCTCTCAGGCAATCATGTTTCAGGAGAAATTCCAGATTGTTGGAGGCATTTGGTCTCCCTAAAACTACTCGATTTGAGTAGCAATGCTTTTTCCGGGAAAATCCCAACCACTATAGGCACTTTATTTCGAATGGAAACATTGAAATTGAGAAGCAACAAACTTGTGGGAGAATTGCCTTCATCCTTGAAGAATTGTAAGAGCTTAAAAGTGATTGATCTTGGAGATAATCAGCTTTTAGGATCAGTCCCTGAATGGTTGGGAGTTAGTTTTCCAAATTTGGTTATACTAATGCTTCGATCTAATCAGTTTAGAGGGAGTTTGCCTTCACAGTTATGTCATTTAACGCACATTCAGATTTTGGATTTCTCTGTGAATGAAATATCTGGAGCTATACCTAAATGCCTCAATAATTTGACTTCTTTAACTCGAGAAGGAAATTCAAGTCTAACCATCAGACATTCTTTTCATCCATCTTATGCACAAGCACCTGGGATGGCGGAAGCACCTTCGCCTGCTGATATGGCGGAAGCGGAAGCACCTATGATGCCATCTGATTATTATGAGGATGATGCAACCTTCATGTGGAAAGGAATAATGTCTTCATACAAAAACACTCTGGGGCTAGTCAAGAGAATTGATCTCTCAAGTAACAGATTAACTGGGGAGATTCCAAGTGAAATCACTCATCTTGTTGGGCTCGTTTCTCTGAATCTTTCAAGGAACAATTTGACTGGACAAATACCTCTAGAGATCGGAAAGTTGAAGTCACTAGATTCTCTTGATTTGTCTAGCAACAAGATAGGTGGCAGGATTCCAACAAGCCTTGCTCGGATCGATAGACTTACTTACATGAATTTATCATATAACAACTTGTCTGGTGAAATTCCAACTGGCACTCAGCTCCAGAGCTTTGATCCATCCTTTTATGCTGGAAATCCTCAATTGTGTGGACGTCCACTTGAAGCTTGTAATCCAGAGGGAACTGGTGGGCCAAATGTCTCGAGTGATCAAGAAGATCCAGATGAGCTCATCACACCGGGCTTTTACATAAGTCTGGGACTTGGATTTGCTGTTGGATTCTGGGTTGTCTGTGGGAGCTTGATATTCAAGCGGTCATGGAGATATGCATACTACAACTTCTTGAATGCTTTAAATGATTGGCTTTATGTGAGGGTAGCTTTGATCAGACGGCAATTAAAGGATATGCTTAGTGGACAATCTTAA

Protein Analysis

1120

Amino Acids

124.13

Weight (kDa)

5.98

Isoelectric Point (pI)

39.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 40 - 81 8.1e-08 Leucine rich repeat N-terminal domain
LRR_14 PF23598 104 - 253 6.4e-13 Leucine-rich repeat region
LRR_8 PF13855 290 - 329 4.2e-06 Leucine rich repeat
LRR_8 PF13855 294 - 353 9.6e-12 Leucine rich repeat
LRR_8 PF13855 326 - 377 1.5e-06 Leucine rich repeat
LRR_14 PF23598 409 - 618 1.5e-19 Leucine-rich repeat region
LRR_8 PF13855 418 - 477 4.7e-13 Leucine rich repeat
LRR_8 PF13855 467 - 525 2.5e-09 Leucine rich repeat
LRR_8 PF13855 514 - 574 1.9e-09 Leucine rich repeat
LRR_8 PF13855 686 - 742 1.5e-06 Leucine rich repeat
LRR_14 PF23598 687 - 786 1.8e-07 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000028)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g45420 FvH4_4g14031 FvH4_5g20780 FvH4_6g28530 FvH4_7g14020 FvH4_7g14030 FvH4_7g14040 FvH4_7g14050 FvH4_7g14060 FvH4_7g14070 FvH4_7g14090 FvH4_7g14110 FvH4_7g14140 FvH4_7g14450
malus_domestica MD00G1189100.v1.1 MD01G1018600.v1.1 MD01G1053800.v1.1 MD01G1053900.v1.1 MD01G1054000.v1.1 MD01G1054100.v1.1 MD01G1056700.v1.1 MD01G1057000.v1.1 MD01G1057300.v1.1 MD01G1057400.v1.1 MD01G1061600.v1.1 MD01G1061800.v1.1 MD01G1061900.v1.1 MD01G1062000.v1.1 MD01G1062400.v1.1 MD01G1062500.v1.1 MD01G1063200.v1.1 MD01G1063300.v1.1 MD01G1063400.v1.1 MD01G1063700.v1.1 MD01G1063900.v1.1 MD01G1064200.v1.1 MD01G1064300.v1.1 MD01G1064400.v1.1 MD01G1064600.v1.1 MD01G1064700.v1.1 MD01G1181100.v1.1 MD01G1212300.v1.1 MD01G1212500.v1.1 MD01G1212600.v1.1 MD02G1271900.v1.1 MD07G1136500.v1.1 MD07G1139300.v1.1 MD07G1141200.v1.1 MD07G1144700.v1.1 MD08G1144200.v1.1 MD14G1186300.v1.1 MD14G1186500.v1.1 MD14G1186700.v1.1 MD14G1186800.v1.1 MD15G1351300.v1.1 MD15G1439500.v1.1
prunus_persica Prupe.1G067000_v2.0.a1 Prupe.2G077400_v2.0.a1 Prupe.2G077700_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078600_v2.0.a1 Prupe.2G078800_v2.0.a1 Prupe.2G099600_v2.0.a1 Prupe.2G099700_v2.0.a1 Prupe.2G155100_v2.0.a1 Prupe.2G155500_v2.0.a1 Prupe.2G155600_v2.0.a1 Prupe.2G155800_v2.0.a1 Prupe.2G155900_v2.0.a1 Prupe.2G156100_v2.0.a1 Prupe.2G166100_v2.0.a1 Prupe.2G166300_v2.0.a1 Prupe.2G167500_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G168400_v2.0.a1 Prupe.2G168700_v2.0.a1 Prupe.2G168800_v2.0.a1 Prupe.2G169000_v2.0.a1 Prupe.2G169100_v2.0.a1 Prupe.2G169200_v2.0.a1 Prupe.2G169500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G172300_v2.0.a1 Prupe.2G304800_v2.0.a1 Prupe.4G264800_v2.0.a1 Prupe.4G265000_v2.0.a1 Prupe.5G051900_v2.0.a1 Prupe.5G052000_v2.0.a1
pyrus_communis pycom01g08380 pycom01g08430 pycom01g08490 pycom01g08520 pycom01g08540 pycom01g08550 pycom01g08600 pycom01g08630 pycom01g08660 pycom01g08720 pycom01g09180 pycom01g09200 pycom01g09210 pycom01g09270 pycom01g09280 pycom01g09300 pycom01g09380 pycom01g19110 pycom01g22260 pycom01g22310 pycom01g22330 pycom01g22350 pycom01g22360 pycom02g23250 pycom07g13420 pycom07g13670 pycom07g13900 pycom07g13910 pycom07g13960 pycom07g13970 pycom07g25680 pycom11g22830
rosa_chinensis RchiOBHm_Chr0c22g0500431 RchiOBHm_Chr0c22g0500441 RchiOBHm_Chr0c22g0500561 RchiOBHm_Chr0c22g0500571 RchiOBHm_Chr0c22g0500611 RchiOBHm_Chr0c22g0500621 RchiOBHm_Chr0c22g0500631 RchiOBHm_Chr0c22g0500681 RchiOBHm_Chr1g0348221 RchiOBHm_Chr1g0348251 RchiOBHm_Chr1g0352861 RchiOBHm_Chr1g0352871 RchiOBHm_Chr1g0352891 RchiOBHm_Chr1g0352901 RchiOBHm_Chr1g0354671 RchiOBHm_Chr1g0354701 RchiOBHm_Chr1g0354711 RchiOBHm_Chr1g0354751 RchiOBHm_Chr1g0354761 RchiOBHm_Chr1g0354841 RchiOBHm_Chr1g0354851 RchiOBHm_Chr1g0354881 RchiOBHm_Chr1g0354971 RchiOBHm_Chr1g0354981 RchiOBHm_Chr1g0354991 RchiOBHm_Chr1g0355001 RchiOBHm_Chr1g0355011 RchiOBHm_Chr1g0355021 RchiOBHm_Chr1g0355861 RchiOBHm_Chr1g0379671 RchiOBHm_Chr1g0379681 RchiOBHm_Chr2g0096591 RchiOBHm_Chr2g0132821 RchiOBHm_Chr3g0454901 RchiOBHm_Chr3g0472711 RchiOBHm_Chr4g0400791 RchiOBHm_Chr5g0069481 RchiOBHm_Chr5g0069511 RchiOBHm_Chr5g0069551 RchiOBHm_Chr6g0254651 RchiOBHm_Chr6g0259721 RchiOBHm_Chr7g0205911 RchiOBHm_Chr7g0206401 RchiOBHm_Chr7g0206571 RchiOBHm_Chr7g0206581 RchiOBHm_Chr7g0206621 RchiOBHm_Chr7g0206631 RchiOBHm_Chr7g0206641 RchiOBHm_Chr7g0206681 RchiOBHm_Chr7g0206691 RchiOBHm_Chr7g0206751 RchiOBHm_Chr7g0206761 RchiOBHm_Chr7g0206851 RchiOBHm_Chr7g0206911 RchiOBHm_Chr7g0206921 RchiOBHm_Chr7g0207001 RchiOBHm_Chr7g0207011 RchiOBHm_Chr7g0207031 RchiOBHm_Chr7g0207101 RchiOBHm_Chr7g0207161 RchiOBHm_Chr7g0207201 RchiOBHm_Chr7g0207271 RchiOBHm_Chr7g0207301 RchiOBHm_Chr7g0207311 RchiOBHm_Chr7g0207421 RchiOBHm_Chr7g0207481 RchiOBHm_Chr7g0207491 RchiOBHm_Chr7g0207501 RchiOBHm_Chr7g0207521 RchiOBHm_Chr7g0207531 RchiOBHm_Chr7g0207561 RchiOBHm_Chr7g0207571 RchiOBHm_Chr7g0207581 RchiOBHm_Chr7g0207601 RchiOBHm_Chr7g0207621 RchiOBHm_Chr7g0207631 RchiOBHm_Chr7g0207651 RchiOBHm_Chr7g0207661 RchiOBHm_Chr7g0207711 RchiOBHm_Chr7g0207761 RchiOBHm_Chr7g0207801 RchiOBHm_Chr7g0208821 RchiOBHm_Chr7g0208831 RchiOBHm_Chr7g0208841 RchiOBHm_Chr7g0213601 RchiOBHm_Chr7g0215981 RchiOBHm_Chr7g0216021
rosa_laevigata RLG00000003193 RLG00000003194 RLG00000003287 RLG00000003288 RLG00000003289 RLG00000003293 RLG00000003294 RLG00000003295 RLG00000003297 RLG00000003299 RLG00000003301 RLG00000003327 RLG00000003347 RLG00000016653 RLG00000018642 RLG00000018643 RLG00000019285 RLG00000022542 RLG00000026368 RLG00000026371 RLG00000028124 RLG00000028125 RLG00000028183 RLG00000028184 RLG00000028185 RLG00000028188 RLG00000028673 RLG00000029267 RLG00000029325 RLG00000029674 RLG00000032883 RLG00000036055 RLG00000036058 RLG00000036065 RLG00000036068 RLG00000036071 RLG00000036072 RLG00000036075 RLG00000036076
rosa_multiflora Rmu_co8250183.1_g000001 Rmu_co8271981.1_g000001 Rmu_co8410829.1_g000001 Rmu_co8432879.1_g000001 Rmu_co8441941.1_g000001 Rmu_sc0000076.1_g000031 Rmu_sc0000738.1_g000038 Rmu_sc0000848.1_g000003 Rmu_sc0000848.1_g000014 Rmu_sc0000848.1_g000015 Rmu_sc0000848.1_g000016 Rmu_sc0001264.1_g000001 Rmu_sc0002284.1_g000018 Rmu_sc0002356.1_g000011 Rmu_sc0003020.1_g000003 Rmu_sc0003115.1_g000001 Rmu_sc0003115.1_g000002 Rmu_sc0003115.1_g000003 Rmu_sc0003115.1_g000004 Rmu_sc0003115.1_g000005 Rmu_sc0003115.1_g000008 Rmu_sc0003115.1_g000010 Rmu_sc0003115.1_g000011 Rmu_sc0003115.1_g000014 Rmu_sc0003565.1_g000002 Rmu_sc0003652.1_g000013 Rmu_sc0003652.1_g000015 Rmu_sc0003652.1_g000016 Rmu_sc0003652.1_g000019 Rmu_sc0003940.1_g000001 Rmu_sc0003940.1_g000004 Rmu_sc0003940.1_g000009 Rmu_sc0004084.1_g000010 Rmu_sc0004705.1_g000021 Rmu_sc0004972.1_g000007 Rmu_sc0004987.1_g000002 Rmu_sc0004987.1_g000006 Rmu_sc0005065.1_g000018 Rmu_sc0005065.1_g000029 Rmu_sc0005391.1_g000002 Rmu_sc0005633.1_g000003 Rmu_sc0005633.1_g000008 Rmu_sc0006632.1_g000014 Rmu_sc0006632.1_g000018 Rmu_sc0006681.1_g000010 Rmu_sc0006681.1_g000011 Rmu_sc0006733.1_g000003 Rmu_sc0007385.1_g000005 Rmu_sc0007385.1_g000007 Rmu_sc0007385.1_g000009 Rmu_sc0007385.1_g000016 Rmu_sc0007645.1_g000002 Rmu_sc0007645.1_g000003 Rmu_sc0007645.1_g000022 Rmu_sc0007828.1_g000008 Rmu_sc0008509.1_g000003 Rmu_sc0008509.1_g000015 Rmu_sc0008509.1_g000016 Rmu_sc0008509.1_g000020 Rmu_sc0008509.1_g000030 Rmu_sc0008509.1_g000041 Rmu_sc0008756.1_g000001 Rmu_sc0008756.1_g000003 Rmu_sc0013028.1_g000002 Rmu_sc0013028.1_g000003 Rmu_sc0013028.1_g000005 Rmu_sc0013160.1_g000001 Rmu_sc0014454.1_g000009 Rmu_sc0014455.1_g000007 Rmu_sc0014659.1_g000004 Rmu_sc0017798.1_g000002 Rmu_sc0017798.1_g000004 Rmu_sc0029608.1_g000001 Rmu_sc0037861.1_g000001 Rmu_sc0038750.1_g000001 Rmu_sc0042995.1_g000001 Rmu_ssc0000161.1_g000017
rosa_roxburghii Rroxscaffold_1G00009180 Rroxscaffold_1G00009190 Rroxscaffold_1G00011450 Rroxscaffold_1G00011480 Rroxscaffold_2G00111660 Rroxscaffold_2G00113570 Rroxscaffold_2G00122140 Rroxscaffold_3G00243730 Rroxscaffold_3G00245750 Rroxscaffold_3G00245760 Rroxscaffold_3G00250220 Rroxscaffold_3G00251160 Rroxscaffold_3G00251270 Rroxscaffold_3G00251280 Rroxscaffold_3G00251300 Rroxscaffold_3G00251340 Rroxscaffold_3G00251350 Rroxscaffold_3G00251390 Rroxscaffold_3G00251400 Rroxscaffold_3G00251560 Rroxscaffold_3G00251570 Rroxscaffold_3G00251870 Rroxscaffold_3G00252200 Rroxscaffold_3G00252210 Rroxscaffold_4G00279970 Rroxscaffold_4G00299970 Rroxscaffold_4G00300760 Rroxscaffold_4G00300780 Rroxscaffold_4G00300810 Rroxscaffold_4G00300850 Rroxscaffold_4G00307080 Rroxscaffold_4G00307100 Rroxscaffold_4G00313990 Rroxscaffold_6G00405080
rosa_rugosa Rorug01G0193600 Rorug01G0193700 Rorug01G0243800 Rorug01G0244000 Rorug01G0244000 Rorug01G0244400 Rorug01G0414300.1 Rorug01G0414500 Rorug01G0414600 Rorug02G0235600 Rorug02G0307900 Rorug02G0583100 Rorug02G0583200 Rorug02G0583300 Rorug05G0398000 Rorug05G0398100 Rorug05G0398200 Rorug05G0580300 Rorug05G0590300 Rorug06G0116000 Rorug06G0116100 Rorug07G0096800 Rorug07G0097100.1 Rorug07G0097200 Rorug07G0098600 Rorug07G0098600 Rorug07G0098700 Rorug07G0099100 Rorug07G0106100 Rorug07G0106200 Rorug07G0106200 Rorug07G0106300 Rorug07G0157600 Rorug07G0157700 Rorug07G0157700 Rorug07G0157800
rosa_samantha Rh1AG255500 Rh1AG256700 Rh1BG225800 Rh1BG226200 Rh1BG230000 Rh1CG195300 Rh1CG238400 Rh1CG238500 Rh1CG238900 Rh1CG239000 Rh1CG239300 Rh1CG239400 Rh1CG239800 Rh1CG240000 Rh1CG240200 Rh1CG240300 Rh1CG244300 Rh1CG406900 Rh1CG407300 Rh1CG407400 Rh2CG343600 Rh2DG383200 Rh3BG205900 Rh4AG404400 Rh4BG415500 Rh5AG455200 Rh5AG455600 Rh5CG497000 Rh5CG497200 Rh7AG228800 Rh7AG230400 Rh7AG230800 Rh7AG231200 Rh7AG231600 Rh7AG231800 Rh7AG232100 Rh7AG241600 Rh7BG236200 Rh7CG238200 Rh7CG239100 Rh7CG243400 Rh7CG244900
rosa_wichuraiana Rw0G023040 Rw1G017780 Rw1G022320 Rw1G022340 Rw1G022410 Rw1G022420 Rw1G022440 Rw1G022460 Rw1G022490 Rw1G022500 Rw1G022530 Rw1G022550 Rw1G022560 Rw1G022600 Rw1G023060 Rw1G038150 Rw1G038160 Rw2G008210 Rw2G022350 Rw2G029290 Rw4G015050 Rw4G019850 Rw5G024060 Rw5G042460 Rw7G019160 Rw7G019460 Rw7G019690 Rw7G019830 Rw7G019860 Rw7G019880 Rw7G019890 Rw7G019930 Rw7G019990 Rw7G020460 Rw7G025100 Rw7G025120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 3094
Acc36I ACCTGC 1 cut(s) 183
AccIII TCCGGA 1 cut(s) 466
AciI CCGC 6 cut(s) 219, 1362, 2636, 2663, 2669, 3250
AclWI GGATC 5 cut(s) 2070, 2386, 2978, 3047, 3149
AcoI YGGCCR 4 cut(s) 82, 253, 1084, 1110
AcuI CTGAAG 3 cut(s) 358, 2094, 2102
AcyI GRCGYC 1 cut(s) 3091
AfaI GTAC 2 cut(s) 1174, 1587
AfiI CCNNNNNNNGG 2 cut(s) 121, 2721
AjnI CCWGG 3 cut(s) 156, 654, 2626
AjuI GAANNNNNNNTTGG 4 cut(s) 1986, 2018, 2063, 2095
Alw21I GWGCWC 4 cut(s) 474, 953, 1025, 3168
Alw26I GTCTC 5 cut(s) 147, 204, 1901, 2197, 3142
AlwI GGATC 5 cut(s) 2070, 2386, 2978, 3047, 3149
AlwNI CAGNNNCTG 1 cut(s) 2387
Ama87I CYCGRG 3 cut(s) 584, 2565, 3139
Aor13HI TCCGGA 1 cut(s) 466
AoxI GGCC 5 cut(s) 82, 253, 1084, 1110, 3128
ApeKI GCWGC 1 cut(s) 2048
Asp700I GAANNNNTTC 3 cut(s) 935, 1152, 2015
AspS9I GGNCC 3 cut(s) 355, 658, 3128
AsuC2I CCSGG 2 cut(s) 2233, 3177
AsuHPI GGTGA 4 cut(s) 236, 320, 539, 3029
AsuII TTCGAA 5 cut(s) 929, 1819, 2009, 2019, 2266
AvaI CYCGRG 3 cut(s) 584, 2565, 3139
AvaII GGWCC 2 cut(s) 355, 658
BalI TGGCCA 4 cut(s) 84, 255, 1086, 1112
BanII GRGCYC 6 cut(s) 474, 953, 1025, 1769, 2838, 3168
BarI GAAGNNNNNNTAC 2 cut(s) 2013, 2045
BbsI GAAGAC 5 cut(s) 746, 1000, 1314, 1337, 2730
Bbv12I GWGCWC 4 cut(s) 474, 953, 1025, 3168
BbvI GCAGC 1 cut(s) 2035
BccI CCATC 7 cut(s) 216, 1786, 2597, 2617, 2626, 2695, 3064
BceAI ACGGC 2 cut(s) 120, 3344
BcgI CGANNNNNNTGC 2 cut(s) 198, 232
BciT130I CCWGG 3 cut(s) 158, 656, 2628
BclI TGATCA 2 cut(s) 3145, 3321
BcnI CCSGG 2 cut(s) 2233, 3177
BcoDI GTCTC 5 cut(s) 147, 204, 1901, 2197, 3142
BfaI CTAG 9 cut(s) 116, 422, 453, 503, 524, 2762, 2885, 2909, 2928
BfmI CTRYAG 3 cut(s) 1415, 1487, 2250
BfuAI ACCTGC 1 cut(s) 183
BglII AGATCT 3 cut(s) 424, 1339, 1921
BisI GCNGC 1 cut(s) 2049
BlpI GCTNAGC 1 cut(s) 1358
BlsI GCNGC 1 cut(s) 2050
Bme1390I CCNGG 5 cut(s) 158, 656, 2233, 2628, 3177
Bme18I GGWCC 2 cut(s) 355, 658
BmeT110I CYCGRG 3 cut(s) 584, 2565, 3139
BmgT120I GGNCC 3 cut(s) 355, 658, 3128
BmiI GGNNCC 2 cut(s) 629, 1749
BmrFI CCNGG 5 cut(s) 158, 656, 2233, 2628, 3177
BmrI ACTGGG 2 cut(s) 1753, 2808
BmsI GCATC 5 cut(s) 101, 121, 1085, 2673, 2698
BmuI ACTGGG 2 cut(s) 1753, 2808
BoxI GACNNNNGTC 1 cut(s) 360
BpiI GAAGAC 5 cut(s) 746, 1000, 1314, 1337, 2730
BpmI CTGGAG 4 cut(s) 1712, 1912, 2544, 3026
Bpu1102I GCTNAGC 1 cut(s) 1358
Bpu14I TTCGAA 5 cut(s) 929, 1819, 2009, 2019, 2266
BpuEI CTTGAG 2 cut(s) 760, 2767
BpuMI CCSGG 2 cut(s) 2233, 3177
Bsa29I ATCGAT 2 cut(s) 1570, 2973
BsaHI GRCGYC 1 cut(s) 3091
BsaI GGTCTC 2 cut(s) 147, 2197
BsaJI CCNNGG 3 cut(s) 79, 1107, 2627
BsaWI WCCGGW 4 cut(s) 466, 1372, 1516, 1562
BsaXI ACNNNNNCTCC 4 cut(s) 144, 174, 1181, 1211
Bsc4I CCNNNNNNNGG 2 cut(s) 121, 2721
Bse3DI GCAATG 2 cut(s) 1226, 2227
BseAI TCCGGA 1 cut(s) 466
BseBI CCWGG 3 cut(s) 158, 656, 2628
BseCI ATCGAT 2 cut(s) 1570, 2973
BseDI CCNNGG 3 cut(s) 79, 1107, 2627
BseLI CCNNNNNNNGG 2 cut(s) 121, 2721
BseMI GCAATG 2 cut(s) 1226, 2227
BseMII CTCAG 7 cut(s) 373, 442, 653, 1623, 2097, 2157, 3050
BseRI GAGGAG 1 cut(s) 750
BseXI GCAGC 1 cut(s) 2035
BseYI CCCAGC 2 cut(s) 1072, 1220
BsgI GTGCAG 1 cut(s) 1671
BshFI GGCC 5 cut(s) 84, 255, 1086, 1112, 3130
BshVI ATCGAT 2 cut(s) 1570, 2973
BsiHKAI GWGCWC 4 cut(s) 474, 953, 1025, 3168
BsiHKCI CYCGRG 3 cut(s) 584, 2565, 3139
BsiSI CCGG 6 cut(s) 467, 1373, 1517, 1563, 2232, 3176
BslFI GGGAC 4 cut(s) 1594, 1810, 2369, 3210
BslI CCNNNNNNNGG 2 cut(s) 121, 2721
BsmAI GTCTC 5 cut(s) 147, 204, 1901, 2197, 3142
BsmFI GGGAC 4 cut(s) 1594, 1810, 2369, 3210
BsmI GAATGC 2 cut(s) 937, 3289
BsnI GGCC 5 cut(s) 84, 255, 1086, 1112, 3130
Bso31I GGTCTC 2 cut(s) 147, 2197
BsoBI CYCGRG 3 cut(s) 584, 2565, 3139
Bsp119I TTCGAA 5 cut(s) 929, 1819, 2009, 2019, 2266
Bsp1286I GDGCHC 6 cut(s) 474, 953, 1025, 1769, 2838, 3168
Bsp13I TCCGGA 1 cut(s) 466
Bsp1720I GCTNAGC 1 cut(s) 1358
BspACI CCGC 6 cut(s) 219, 1362, 2636, 2663, 2669, 3250
BspANI GGCC 5 cut(s) 84, 255, 1086, 1112, 3130
BspCNI CTCAG 7 cut(s) 372, 441, 654, 1622, 2096, 2156, 3049
BspDI ATCGAT 2 cut(s) 1570, 2973
BspEI TCCGGA 1 cut(s) 466
BspLI GGNNCC 2 cut(s) 629, 1749
BspMI ACCTGC 1 cut(s) 183
BspPI GGATC 5 cut(s) 2070, 2386, 2978, 3047, 3149
BspT104I TTCGAA 5 cut(s) 929, 1819, 2009, 2019, 2266
BspTNI GGTCTC 2 cut(s) 147, 2197
BsrDI GCAATG 2 cut(s) 1226, 2227
BssECI CCNNGG 3 cut(s) 79, 1107, 2627
BssNI GRCGYC 1 cut(s) 3091
BssT1I CCWWGG 2 cut(s) 79, 1107
Bst2UI CCWGG 3 cut(s) 158, 656, 2628
Bst4CI ACNGT 6 cut(s) 215, 288, 1140, 1585, 2034, 2469
Bst6I CTCTTC 2 cut(s) 187, 979
BstACI GRCGYC 1 cut(s) 3091
BstAPI GCANNNNNTGC 1 cut(s) 140
BstBI TTCGAA 5 cut(s) 929, 1819, 2009, 2019, 2266
BstC8I GCNNGC 1 cut(s) 2652
BstMAI GTCTC 5 cut(s) 147, 204, 1901, 2197, 3142
BstMWI GCNNNNNNNGC 4 cut(s) 55, 140, 1694, 2660
BstNI CCWGG 3 cut(s) 158, 656, 2628
BstNSI RCATGY 1 cut(s) 29
BstPAI GACNNNNGTC 1 cut(s) 360
BstSCI CCNGG 5 cut(s) 156, 654, 2231, 2626, 3175
BstSFI CTRYAG 3 cut(s) 1415, 1487, 2250
BstV1I GCAGC 1 cut(s) 2035
BstV2I GAAGAC 5 cut(s) 746, 1000, 1314, 1337, 2730
BstX2I RGATCY 5 cut(s) 424, 1339, 1921, 2062, 3154
BstXI CCANNNNNNTGG 6 cut(s) 917, 989, 1289, 1433, 1505, 2178
BstYI RGATCY 5 cut(s) 424, 1339, 1921, 2062, 3154
Bsu15I ATCGAT 2 cut(s) 1570, 2973
BsuRI GGCC 5 cut(s) 84, 255, 1086, 1112, 3130
BsuTUI ATCGAT 2 cut(s) 1570, 2973
BtsI GCAGTG 1 cut(s) 235
BtsIMutI CAGTG 2 cut(s) 235, 1688
BveI ACCTGC 1 cut(s) 183
Cac8I GCNNGC 1 cut(s) 2652
CaiI CAGNNNCTG 1 cut(s) 2387
Cfr13I GGNCC 3 cut(s) 355, 658, 3128
ClaI ATCGAT 2 cut(s) 1570, 2973
CseI GACGC 1 cut(s) 2040
CsiI ACCWGGT 1 cut(s) 156
Csp6I GTAC 2 cut(s) 1173, 1586
CspCI CAANNNNNGTGG 2 cut(s) 2923, 2958
CviQI GTAC 2 cut(s) 1173, 1586
DraI TTTAAA 2 cut(s) 2127, 3291
EaeI YGGCCR 4 cut(s) 82, 253, 1084, 1110
Eam1104I CTCTTC 2 cut(s) 187, 979
EarI CTCTTC 2 cut(s) 187, 979
EciI GGCGGA 2 cut(s) 2651, 2678
Ecl136II GAGCTC 4 cut(s) 472, 951, 1023, 3166
Eco130I CCWWGG 2 cut(s) 79, 1107
Eco24I GRGCYC 6 cut(s) 474, 953, 1025, 1769, 2838, 3168
Eco31I GGTCTC 2 cut(s) 147, 2197
Eco32I GATATC 2 cut(s) 500, 1849
Eco47I GGWCC 2 cut(s) 355, 658
Eco53kI GAGCTC 4 cut(s) 472, 951, 1023, 3166
Eco57I CTGAAG 3 cut(s) 358, 2094, 2102
Eco88I CYCGRG 3 cut(s) 584, 2565, 3139
EcoICRI GAGCTC 4 cut(s) 472, 951, 1023, 3166
EcoRI GAATTC 1 cut(s) 1639
EcoRII CCWGG 3 cut(s) 156, 654, 2626
EcoRV GATATC 2 cut(s) 500, 1849
EcoT14I CCWWGG 2 cut(s) 79, 1107
EcoT22I ATGCAT 1 cut(s) 3268
EcoT38I GRGCYC 6 cut(s) 474, 953, 1025, 1769, 2838, 3168
ErhI CCWWGG 2 cut(s) 79, 1107
FaqI GGGAC 4 cut(s) 1594, 1810, 2369, 3210
FauNDI CATATG 1 cut(s) 1984
FbaI TGATCA 2 cut(s) 3145, 3321
Fnu4HI GCNGC 1 cut(s) 2049
FriOI GRGCYC 6 cut(s) 474, 953, 1025, 1769, 2838, 3168
Fsp4HI GCNGC 1 cut(s) 2049
FspBI CTAG 9 cut(s) 116, 422, 453, 503, 524, 2762, 2885, 2909, 2928
GluI GCNGC 1 cut(s) 2049
GsaI CCCAGC 2 cut(s) 1076, 1224
GsuI CTGGAG 4 cut(s) 1712, 1912, 2544, 3026
HaeIII GGCC 5 cut(s) 84, 255, 1086, 1112, 3130
HapII CCGG 6 cut(s) 467, 1373, 1517, 1563, 2232, 3176
HgaI GACGC 1 cut(s) 2040
Hin1I GRCGYC 1 cut(s) 3091
HincII GTYRAC 1 cut(s) 294
HindII GTYRAC 1 cut(s) 294
HindIII AAGCTT 1 cut(s) 3102
HpaII CCGG 6 cut(s) 467, 1373, 1517, 1563, 2232, 3176
HphI GGTGA 4 cut(s) 236, 320, 539, 3029
Hpy166II GTNNAC 5 cut(s) 235, 294, 3089, 3095, 3353
Hpy8I GTNNAC 5 cut(s) 235, 294, 3089, 3095, 3353
HpyCH4III ACNGT 6 cut(s) 215, 288, 1140, 1585, 2034, 2469
HpyCH4IV ACGT 2 cut(s) 99, 3091
HpyF10VI GCNNNNNNNGC 4 cut(s) 55, 140, 1694, 2660
HpySE526I ACGT 2 cut(s) 99, 3091
Hsp92I GRCGYC 1 cut(s) 3091
Kpn2I TCCGGA 1 cut(s) 466
Ksp22I TGATCA 2 cut(s) 3145, 3321
LmnI GCTCC 7 cut(s) 456, 469, 633, 720, 2525, 3045, 3234
Lsp1109I GCAGC 1 cut(s) 2035
LweI GCATC 5 cut(s) 101, 121, 1085, 2673, 2698
MabI ACCWGGT 1 cut(s) 156
MaeI CTAG 9 cut(s) 116, 422, 453, 503, 524, 2762, 2885, 2909, 2928
MaeII ACGT 2 cut(s) 99, 3091
MfeI CAATTG 3 cut(s) 42, 1760, 3080
MflI RGATCY 5 cut(s) 424, 1339, 1921, 2062, 3154
MhlI GDGCHC 6 cut(s) 474, 953, 1025, 1769, 2838, 3168
MlsI TGGCCA 4 cut(s) 84, 255, 1086, 1112
MluNI TGGCCA 4 cut(s) 84, 255, 1086, 1112
MlyI GAGTC 2 cut(s) 240, 1903
MmeI TCCRAC 6 cut(s) 788, 1002, 2159, 2978, 3050, 3193
Mox20I TGGCCA 4 cut(s) 84, 255, 1086, 1112
Mph1103I ATGCAT 1 cut(s) 3268
MroI TCCGGA 1 cut(s) 466
MroXI GAANNNNTTC 3 cut(s) 935, 1152, 2015
MscI TGGCCA 4 cut(s) 84, 255, 1086, 1112
MslI CAYNNNNRTG 5 cut(s) 30, 90, 276, 2098, 2470
Msp20I TGGCCA 4 cut(s) 84, 255, 1086, 1112
MspI CCGG 6 cut(s) 467, 1373, 1517, 1563, 2232, 3176
MspR9I CCNGG 5 cut(s) 158, 656, 2233, 2628, 3177
MunI CAATTG 3 cut(s) 42, 1760, 3080
Mva1269I GAATGC 2 cut(s) 937, 3289
MvaI CCWGG 3 cut(s) 158, 656, 2628
MwoI GCNNNNNNNGC 4 cut(s) 55, 140, 1694, 2660
NciI CCSGG 2 cut(s) 2233, 3177
NdeI CATATG 1 cut(s) 1984
NlaIV GGNNCC 2 cut(s) 629, 1749
NmuCI GTSAC 3 cut(s) 100, 362, 2904
NsiI ATGCAT 1 cut(s) 3268
NspI RCATGY 1 cut(s) 29
NspV TTCGAA 5 cut(s) 929, 1819, 2009, 2019, 2266
PaeR7I CTCGAG 2 cut(s) 2565, 3139
PctI GAATGC 2 cut(s) 937, 3289
PdmI GAANNNNTTC 3 cut(s) 935, 1152, 2015
PfeI GAWTC 9 cut(s) 997, 1068, 1293, 1627, 2806, 2848, 2912, 2950, 3216
PfoI TCCNGGA 1 cut(s) 2231
PkrI GCNGC 1 cut(s) 2050
PleI GAGTC 2 cut(s) 239, 1902
PpsI GAGTC 2 cut(s) 239, 1902
PshAI GACNNNNGTC 1 cut(s) 360
Psp124BI GAGCTC 4 cut(s) 474, 953, 1025, 3168
Psp6I CCWGG 3 cut(s) 156, 654, 2626
PspFI CCCAGC 2 cut(s) 1072, 1220
PspGI CCWGG 3 cut(s) 156, 654, 2626
PspN4I GGNNCC 2 cut(s) 629, 1749
PspPI GGNCC 3 cut(s) 355, 658, 3128
PstNI CAGNNNCTG 1 cut(s) 2387
PsuI RGATCY 5 cut(s) 424, 1339, 1921, 2062, 3154
RsaI GTAC 2 cut(s) 1174, 1587
RsaNI GTAC 2 cut(s) 1173, 1586
RseI CAYNNNNRTG 5 cut(s) 30, 90, 276, 2098, 2470
SacI GAGCTC 4 cut(s) 474, 953, 1025, 3168
SatI GCNGC 1 cut(s) 2049
Sau96I GGNCC 3 cut(s) 355, 658, 3128
SchI GAGTC 2 cut(s) 240, 1903
ScrFI CCNGG 5 cut(s) 158, 656, 2233, 2628, 3177
SduI GDGCHC 6 cut(s) 474, 953, 1025, 1769, 2838, 3168
SexAI ACCWGGT 1 cut(s) 156
SfaNI GCATC 5 cut(s) 101, 121, 1085, 2673, 2698
SfcI CTRYAG 3 cut(s) 1415, 1487, 2250
Sfr274I CTCGAG 2 cut(s) 2565, 3139
SfuI TTCGAA 5 cut(s) 929, 1819, 2009, 2019, 2266
SinI GGWCC 2 cut(s) 355, 658
SlaI CTCGAG 2 cut(s) 2565, 3139
SmiMI CAYNNNNRTG 5 cut(s) 30, 90, 276, 2098, 2470
SmlI CTYRAG 4 cut(s) 739, 2565, 2782, 3139
SmoI CTYRAG 4 cut(s) 739, 2565, 2782, 3139
SsiI CCGC 6 cut(s) 219, 1362, 2636, 2663, 2669, 3250
SspI AATATT 2 cut(s) 350, 852
SspMI CTAG 9 cut(s) 116, 422, 453, 503, 524, 2762, 2885, 2909, 2928
SstI GAGCTC 4 cut(s) 474, 953, 1025, 3168
StyD4I CCNGG 5 cut(s) 156, 654, 2231, 2626, 3175
StyI CCWWGG 2 cut(s) 79, 1107
TaaI ACNGT 6 cut(s) 215, 288, 1140, 1585, 2034, 2469
TaiI ACGT 2 cut(s) 102, 3094
TatI WGTACW 1 cut(s) 1172
TfiI GAWTC 9 cut(s) 997, 1068, 1293, 1627, 2806, 2848, 2912, 2950, 3216
TscAI CASTG 2 cut(s) 242, 1695
TseFI GTSAC 3 cut(s) 100, 362, 2904
TseI GCWGC 1 cut(s) 2048
Tsp45I GTSAC 3 cut(s) 100, 362, 2904
TspRI CASTG 2 cut(s) 242, 1695
VpaK11BI GGWCC 2 cut(s) 355, 658
XbaI TCTAGA 2 cut(s) 502, 2884
XceI RCATGY 1 cut(s) 29
XcmI CCANNNNNNNNNTGG 1 cut(s) 1887
XhoI CTCGAG 2 cut(s) 2565, 3139
XmnI GAANNNNTTC 3 cut(s) 935, 1152, 2015
XspI CTAG 9 cut(s) 116, 422, 453, 503, 524, 2762, 2885, 2909, 2928
ZraI GACGTC 1 cut(s) 3092
Zsp2I ATGCAT 1 cut(s) 3268
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.