Rmu_sc0003940.1_g000004

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003940.1
Physical Location & Seq
Reverse (-)
29641 .. 35664
6024 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003940.1_g000004.1.cds

Sequence Viewer

Length: 6024 bp
atggagttgggaaggtggctcagacatgcttttgcaatatcaattgtccttcttctgcatatcaacggttccttatcactcggccaccaccatgctaacgtgacgacgaggtgccttgagagggagagaggtgcactccttgctatcaaaggagacctggtggatgaatacaacctgctctcttcttggggaagcgaagccaaaaagcaagactgttgcggatgggaaagagtaagctgcaatcaccagactggccatgttactcaacttcatcttggaggactggaggtgatctcttcactaggtgagtttatgactctcaaatattttaaaggaatagttagtcctaaactcattgagttgcagcatttggaatatttggacctcagttacaatttcttcaatgccagccaaattccagcgctcatttgttctctgtccaatttaagacacctagatctccattacaataacctcactgggagcaaaattccggagctcattagtaatctgatcaatttaagatatctagatctctcttatagtgactttggtgatcaacttctatatcatcagcttagaaacctctcttatggtgactttggtgatcaaattctatatcatcagcttagaaacctctcttatggtgactttggtgatcaaattctatatcatcagcttagaaaccttactcacttgcagtatctcaatctcgggaggaatgcattcactcgggctgtaaaaaacctcaattggctctcacatctttcatctttaaaatacctggacctgagtttcaccgatctaagtaaggtttctgattggctggaaacaataaacaagctccccaatttaagaaacttgaccttgagcttctgtagtcttcctcttccaactctttccactctttctcacataaattcttccaattctcttgttagtgttgatttgtctggaaatcctgctgtcatttcttcaatattcaaatggttgtgcaatttcaataccacccttgttcatcttgacctctcttccaaccaattaagtggtttgattccgaatgctttctcaaacatgggctcacttgaatatcttgacctctcttccaaccaatttagtggtttgattcccgatgttttcagaaacatgggctcacttgaacatctatccctctcttccaaccaatttagtggtatgatttcgaatgctttcgcaaacatgagctcacttgcatatctatccctctcttccaaccaattaagtggtttgatttcgaatgctttcgcaaacatgagctcacttgcatatctatccctctcttccaaccaatttagtggttgtattcccgatgctttcagaaacatgggctcacttgaacatctatccctctcttccaaccaatttagtggtttgattcccgatgctttcaaaaacatgagggcacttgaacatctatccctctcatccaaccaatttagtggtttgatttcgaatgctttcgcaaacatgagctcacttgcagatcttgacctctcttccaaccaattaagtggtttgattcccgatgctttcgcaaacatggggtcacttgaatatctatccctctcttccaaccaatttagtgatttgactcccgatgttttcagaaacatgggctcacttgaatatctatacctctcttccaaccaattaagtggttcgattcccgatgctttcgcaaacatgagctcacttgcaagtcttgacctctatttcaaccaattaagtggttcgattcccgatgctttcgcaaacatgagctcacttgcaagtcttgacctctcttccaaccaattaagtggtttgactcccgatgctttcagaaacatgggctcacttgcaagtcttgacctctatttcaaccaattaagtggttcgattcccgatgctttcgcaaacatgggctcacttgcaagtcttgacctctcttccaaccaattaagtggttcgattcccgatgttttcagaaatatgagctcacttgcaagtcttgccctatcttccaaccaattaagtggttcgattcccgatgttttcagaaatatgagctcacttgcaagtcttgccctatcttccaaccaattaagtggttcgattcccgatgttttcagaaatatgagctcacttgcaagtcttgccctatcttccaaccaattaagtggttcgattcccgatgttttcagaaatatgagctcacttgcaagtcttgccctatcttccaaccaattaagtggttcgattcccgatgttttcagaaatatgagctcacttgcaagtcttgccctatcttccaaccaattaagtggttcgattcccgatgttttcagaaatatgagctcacttgcaagtcttgccctatcttccaaccaattaagtggttcgattcccgatgttttcagaaatatgagctcacttgcaagtcttgacctctcttccaaccaattaagtggttcgattcccgatgttttcagaaatatgagctcacttgcaagtcttgccctatcttccaaccaattaagtggttcgattcccgatgttttcagaaatatgggctcacttgaacatcttaccctctcttccaaccaattaagtggttcgattcccgatgttttcgcaaacatgggctcacttgcaagtcttgccctctcttccaaccaattaagtggtttcactcccgatgctttcagaaacatgagctcacttgcaagtcttgccctctcttccaaccaattaagtggttcgattcccgatgctttcaaaaacatgggctcacttgcaagtcttgacctctcttccaaccaattaagtggttcgattcccgatgctttcagaaacatgggctcacttgcaagtcttgacctctcttccaaccaattaaggggttggactcccgatgctttcataaacatgggctcacttgcaagtcttgacctctcttccaaccaattaaggggttggactcccgatgctttcagaaacatgggctcacttgcaagtcttgacctctcttccaaccaattaagtggttcgattcccgatgctttcagaaacatgagctcacttgcaagtcttgatctctcttccaaccaattaaggggtttcagtctcgatgttttcgcaaacatgagctcacttggaagtcttgacctctcttccaaccaattaagtggtttgactcccgatgctttcagaaacatgagctcacttgaaagtcttgacctctcttccaaccaattaagtggttcgattcccgatgctttcagaaacatgggctcacttgaacatctattcctctattccaacaaattaagtggttcgattcccgatgttttcagaaacatgggctcacttgcaagtcttgacctctctttaaaccaattaagtggtttcactcccgatgcttttagaaacatgagctcacttgcatatctatccctctcttccaaccaattaagtggttcgattcccgatgctttcagaaacatgggctcacttgaacatcttgacctctcttccaaccaattaagtggtttgattcccgatgctttcagaaacatgggctcacttgaacatcttgacctctcttccaaccaattaagtggtttgactcccgatgctttcagaaacatgggctcacttttagatcttgacctctcttccaacaaattaagtggtttgattcacgatgctttcgcaaacatgagctcacttgaaggtcttgacatctcttataacccattcgagggagggatcccagcatccattggccagttatgcagtttgagacatgtgtcagttttaggttgtaatctaacaagtggacaactttccgagtttgttcaaggatgttcagcatgtgttcaaaactcattacagagttttgatctttccaataatcatcttgctgggtcacttcctaatcttacaagcttttcatcattggaggtattaactctctccaaaaataagttgagtgttctggatagtattggaaaattttcttctctgaaacaattatatgttgatcaaaatctattacgatggatgataccggaaagtattgggaaactctccggtttgtatgtcttggatctctctggaaatcttctgagcggaagaattccagaaggtattgggcaactctcatcattgggacgtttagttctttctggaaatcaattaagcagaagcatacctgaaactattgggcaactttcatctttggaaagtttagatctctctagaaatctattaagcggaagaataccggaaagtattggacagatgtctaggttgggctttataaatcttagtatgaatcgtttggaaggggagatttcagaaactcatttctcaaaactcatttttctagacgagttggatttatcctataacccattattagaattcaatgtcacttctgattgggttcctcgtttccaattgtattatctaagtttgaggtcttgtatggtagggccggatttcccaaaatggcttcgaacccaaaaatatctttcctacattgacatgtctgatggtgacatttcagatgtccttccaagttggttgtggggtctatttcgtgacggttcgactatagatctgtcaaacaatcaaattagaggaacattagagagttcagaggctgtatcattcagccgagttgaagttcgatttagttcgaaccagttggaaggtccaataccctcatttctatcaaaagcgtcatatttggatctctctgataataaattttcagagatgacttccttcttgtgttctgcgaatgttaaaatttctaaatttcttgatctctccacaaacaatattcctggagaagttccagattgctggagacattgggtcaatctagaacttctcgatttgagtaacaattctttttctgggaaaatcccacccaatataggatgtttacttcgaatcaaaacattgaaattaaggagcaacagacttgtgggagaattgccttcatccttgaagaattgtacaagcttaaatgttattgatcttgggtacaataagctttcaagttcagtgcctgaatggttaggggtcagtcttccaaatttggttattcttatgcttcaatccaatcagcttagtggaagtttgccttcacaactatgccatctagcacgccttcaaattttggatgtctctgtgaatgaaatctctggaactataccaaaatgcctcgatagtttgacttctttggctcaagaaggaaattcaaatctaaccatcagacattcgtttaatatgtctaatggtgaaggaaatatgacctctctttattatgaggatgatgcaaccttcatgtggaaaggaataatgtcttcatacaaaaacactctggggctagtcaagagaattgatctctcaagcaacagattaactggggagattccaagtgaaatcactcatcttgttgggctcgtttctctgaacctttcaaggaacaatttgactgggcaaatacctccagagatcggaaagttgaagtcactagattctcttgatttgtctagaaacaagataggtggcaggattccgacaagccttgctcggatctatggacttggtgtcatggatttgtcatataacaacttgtctggtgaaattccaactggtactcagctccagagctttgatccctccttttatgctggaaatcctcaattgtgtggacttccacttgaagtttgtaatccagagggaactggtcggccaaatgtctcgagtgatcaagaagatccagatgagctcatcacaacgggcttttacataaatctgggacttggatttgctgttggattctgggttgtctgcgggagtttgatattcaagcggtcatggagatatgcatactacaacttcttgaatgctttaaatgattggctttatgtgagggtagctttgatcagacggcaattaaaggatatgcttagtggacaatcttaa

Protein Analysis

2007

Amino Acids

218.1

Weight (kDa)

5.11

Isoelectric Point (pI)

33.28

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000028)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g45420 FvH4_4g14031 FvH4_5g20780 FvH4_6g28530 FvH4_7g14020 FvH4_7g14030 FvH4_7g14040 FvH4_7g14050 FvH4_7g14060 FvH4_7g14070 FvH4_7g14090 FvH4_7g14110 FvH4_7g14140 FvH4_7g14450
malus_domestica MD00G1189100.v1.1 MD01G1018600.v1.1 MD01G1053800.v1.1 MD01G1053900.v1.1 MD01G1054000.v1.1 MD01G1054100.v1.1 MD01G1056700.v1.1 MD01G1057000.v1.1 MD01G1057300.v1.1 MD01G1057400.v1.1 MD01G1061600.v1.1 MD01G1061800.v1.1 MD01G1061900.v1.1 MD01G1062000.v1.1 MD01G1062400.v1.1 MD01G1062500.v1.1 MD01G1063200.v1.1 MD01G1063300.v1.1 MD01G1063400.v1.1 MD01G1063700.v1.1 MD01G1063900.v1.1 MD01G1064200.v1.1 MD01G1064300.v1.1 MD01G1064400.v1.1 MD01G1064600.v1.1 MD01G1064700.v1.1 MD01G1181100.v1.1 MD01G1212300.v1.1 MD01G1212500.v1.1 MD01G1212600.v1.1 MD02G1271900.v1.1 MD07G1136500.v1.1 MD07G1139300.v1.1 MD07G1141200.v1.1 MD07G1144700.v1.1 MD08G1144200.v1.1 MD14G1186300.v1.1 MD14G1186500.v1.1 MD14G1186700.v1.1 MD14G1186800.v1.1 MD15G1351300.v1.1 MD15G1439500.v1.1
prunus_persica Prupe.1G067000_v2.0.a1 Prupe.2G077400_v2.0.a1 Prupe.2G077700_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078600_v2.0.a1 Prupe.2G078800_v2.0.a1 Prupe.2G099600_v2.0.a1 Prupe.2G099700_v2.0.a1 Prupe.2G155100_v2.0.a1 Prupe.2G155500_v2.0.a1 Prupe.2G155600_v2.0.a1 Prupe.2G155800_v2.0.a1 Prupe.2G155900_v2.0.a1 Prupe.2G156100_v2.0.a1 Prupe.2G166100_v2.0.a1 Prupe.2G166300_v2.0.a1 Prupe.2G167500_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G168400_v2.0.a1 Prupe.2G168700_v2.0.a1 Prupe.2G168800_v2.0.a1 Prupe.2G169000_v2.0.a1 Prupe.2G169100_v2.0.a1 Prupe.2G169200_v2.0.a1 Prupe.2G169500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G172300_v2.0.a1 Prupe.2G304800_v2.0.a1 Prupe.4G264800_v2.0.a1 Prupe.4G265000_v2.0.a1 Prupe.5G051900_v2.0.a1 Prupe.5G052000_v2.0.a1
pyrus_communis pycom01g08380 pycom01g08430 pycom01g08490 pycom01g08520 pycom01g08540 pycom01g08550 pycom01g08600 pycom01g08630 pycom01g08660 pycom01g08720 pycom01g09180 pycom01g09200 pycom01g09210 pycom01g09270 pycom01g09280 pycom01g09300 pycom01g09380 pycom01g19110 pycom01g22260 pycom01g22310 pycom01g22330 pycom01g22350 pycom01g22360 pycom02g23250 pycom07g13420 pycom07g13670 pycom07g13900 pycom07g13910 pycom07g13960 pycom07g13970 pycom07g25680 pycom11g22830
rosa_chinensis RchiOBHm_Chr0c22g0500431 RchiOBHm_Chr0c22g0500441 RchiOBHm_Chr0c22g0500561 RchiOBHm_Chr0c22g0500571 RchiOBHm_Chr0c22g0500611 RchiOBHm_Chr0c22g0500621 RchiOBHm_Chr0c22g0500631 RchiOBHm_Chr0c22g0500681 RchiOBHm_Chr1g0348221 RchiOBHm_Chr1g0348251 RchiOBHm_Chr1g0352861 RchiOBHm_Chr1g0352871 RchiOBHm_Chr1g0352891 RchiOBHm_Chr1g0352901 RchiOBHm_Chr1g0354671 RchiOBHm_Chr1g0354701 RchiOBHm_Chr1g0354711 RchiOBHm_Chr1g0354751 RchiOBHm_Chr1g0354761 RchiOBHm_Chr1g0354841 RchiOBHm_Chr1g0354851 RchiOBHm_Chr1g0354881 RchiOBHm_Chr1g0354971 RchiOBHm_Chr1g0354981 RchiOBHm_Chr1g0354991 RchiOBHm_Chr1g0355001 RchiOBHm_Chr1g0355011 RchiOBHm_Chr1g0355021 RchiOBHm_Chr1g0355861 RchiOBHm_Chr1g0379671 RchiOBHm_Chr1g0379681 RchiOBHm_Chr2g0096591 RchiOBHm_Chr2g0132821 RchiOBHm_Chr3g0454901 RchiOBHm_Chr3g0472711 RchiOBHm_Chr4g0400791 RchiOBHm_Chr5g0069481 RchiOBHm_Chr5g0069511 RchiOBHm_Chr5g0069551 RchiOBHm_Chr6g0254651 RchiOBHm_Chr6g0259721 RchiOBHm_Chr7g0205911 RchiOBHm_Chr7g0206401 RchiOBHm_Chr7g0206571 RchiOBHm_Chr7g0206581 RchiOBHm_Chr7g0206621 RchiOBHm_Chr7g0206631 RchiOBHm_Chr7g0206641 RchiOBHm_Chr7g0206681 RchiOBHm_Chr7g0206691 RchiOBHm_Chr7g0206751 RchiOBHm_Chr7g0206761 RchiOBHm_Chr7g0206851 RchiOBHm_Chr7g0206911 RchiOBHm_Chr7g0206921 RchiOBHm_Chr7g0207001 RchiOBHm_Chr7g0207011 RchiOBHm_Chr7g0207031 RchiOBHm_Chr7g0207101 RchiOBHm_Chr7g0207161 RchiOBHm_Chr7g0207201 RchiOBHm_Chr7g0207271 RchiOBHm_Chr7g0207301 RchiOBHm_Chr7g0207311 RchiOBHm_Chr7g0207421 RchiOBHm_Chr7g0207481 RchiOBHm_Chr7g0207491 RchiOBHm_Chr7g0207501 RchiOBHm_Chr7g0207521 RchiOBHm_Chr7g0207531 RchiOBHm_Chr7g0207561 RchiOBHm_Chr7g0207571 RchiOBHm_Chr7g0207581 RchiOBHm_Chr7g0207601 RchiOBHm_Chr7g0207621 RchiOBHm_Chr7g0207631 RchiOBHm_Chr7g0207651 RchiOBHm_Chr7g0207661 RchiOBHm_Chr7g0207711 RchiOBHm_Chr7g0207761 RchiOBHm_Chr7g0207801 RchiOBHm_Chr7g0208821 RchiOBHm_Chr7g0208831 RchiOBHm_Chr7g0208841 RchiOBHm_Chr7g0213601 RchiOBHm_Chr7g0215981 RchiOBHm_Chr7g0216021
rosa_laevigata RLG00000003193 RLG00000003194 RLG00000003287 RLG00000003288 RLG00000003289 RLG00000003293 RLG00000003294 RLG00000003295 RLG00000003297 RLG00000003299 RLG00000003301 RLG00000003327 RLG00000003347 RLG00000016653 RLG00000018642 RLG00000018643 RLG00000019285 RLG00000022542 RLG00000026368 RLG00000026371 RLG00000028124 RLG00000028125 RLG00000028183 RLG00000028184 RLG00000028185 RLG00000028188 RLG00000028673 RLG00000029267 RLG00000029325 RLG00000029674 RLG00000032883 RLG00000036055 RLG00000036058 RLG00000036065 RLG00000036068 RLG00000036071 RLG00000036072 RLG00000036075 RLG00000036076
rosa_multiflora Rmu_co8250183.1_g000001 Rmu_co8271981.1_g000001 Rmu_co8410829.1_g000001 Rmu_co8432879.1_g000001 Rmu_co8441941.1_g000001 Rmu_sc0000076.1_g000031 Rmu_sc0000738.1_g000038 Rmu_sc0000848.1_g000003 Rmu_sc0000848.1_g000014 Rmu_sc0000848.1_g000015 Rmu_sc0000848.1_g000016 Rmu_sc0001264.1_g000001 Rmu_sc0002284.1_g000018 Rmu_sc0002356.1_g000011 Rmu_sc0003020.1_g000003 Rmu_sc0003115.1_g000001 Rmu_sc0003115.1_g000002 Rmu_sc0003115.1_g000003 Rmu_sc0003115.1_g000004 Rmu_sc0003115.1_g000005 Rmu_sc0003115.1_g000008 Rmu_sc0003115.1_g000010 Rmu_sc0003115.1_g000011 Rmu_sc0003115.1_g000014 Rmu_sc0003565.1_g000002 Rmu_sc0003652.1_g000013 Rmu_sc0003652.1_g000015 Rmu_sc0003652.1_g000016 Rmu_sc0003652.1_g000019 Rmu_sc0003940.1_g000001 Rmu_sc0003940.1_g000004 Rmu_sc0003940.1_g000009 Rmu_sc0004084.1_g000010 Rmu_sc0004705.1_g000021 Rmu_sc0004972.1_g000007 Rmu_sc0004987.1_g000002 Rmu_sc0004987.1_g000006 Rmu_sc0005065.1_g000018 Rmu_sc0005065.1_g000029 Rmu_sc0005391.1_g000002 Rmu_sc0005633.1_g000003 Rmu_sc0005633.1_g000008 Rmu_sc0006632.1_g000014 Rmu_sc0006632.1_g000018 Rmu_sc0006681.1_g000010 Rmu_sc0006681.1_g000011 Rmu_sc0006733.1_g000003 Rmu_sc0007385.1_g000005 Rmu_sc0007385.1_g000007 Rmu_sc0007385.1_g000009 Rmu_sc0007385.1_g000016 Rmu_sc0007645.1_g000002 Rmu_sc0007645.1_g000003 Rmu_sc0007645.1_g000022 Rmu_sc0007828.1_g000008 Rmu_sc0008509.1_g000003 Rmu_sc0008509.1_g000015 Rmu_sc0008509.1_g000016 Rmu_sc0008509.1_g000020 Rmu_sc0008509.1_g000030 Rmu_sc0008509.1_g000041 Rmu_sc0008756.1_g000001 Rmu_sc0008756.1_g000003 Rmu_sc0013028.1_g000002 Rmu_sc0013028.1_g000003 Rmu_sc0013028.1_g000005 Rmu_sc0013160.1_g000001 Rmu_sc0014454.1_g000009 Rmu_sc0014455.1_g000007 Rmu_sc0014659.1_g000004 Rmu_sc0017798.1_g000002 Rmu_sc0017798.1_g000004 Rmu_sc0029608.1_g000001 Rmu_sc0037861.1_g000001 Rmu_sc0038750.1_g000001 Rmu_sc0042995.1_g000001 Rmu_ssc0000161.1_g000017
rosa_roxburghii Rroxscaffold_1G00009180 Rroxscaffold_1G00009190 Rroxscaffold_1G00011450 Rroxscaffold_1G00011480 Rroxscaffold_2G00111660 Rroxscaffold_2G00113570 Rroxscaffold_2G00122140 Rroxscaffold_3G00243730 Rroxscaffold_3G00245750 Rroxscaffold_3G00245760 Rroxscaffold_3G00250220 Rroxscaffold_3G00251160 Rroxscaffold_3G00251270 Rroxscaffold_3G00251280 Rroxscaffold_3G00251300 Rroxscaffold_3G00251340 Rroxscaffold_3G00251350 Rroxscaffold_3G00251390 Rroxscaffold_3G00251400 Rroxscaffold_3G00251560 Rroxscaffold_3G00251570 Rroxscaffold_3G00251870 Rroxscaffold_3G00252200 Rroxscaffold_3G00252210 Rroxscaffold_4G00279970 Rroxscaffold_4G00299970 Rroxscaffold_4G00300760 Rroxscaffold_4G00300780 Rroxscaffold_4G00300810 Rroxscaffold_4G00300850 Rroxscaffold_4G00307080 Rroxscaffold_4G00307100 Rroxscaffold_4G00313990 Rroxscaffold_6G00405080
rosa_rugosa Rorug01G0193600 Rorug01G0193700 Rorug01G0243800 Rorug01G0244000 Rorug01G0244000 Rorug01G0244400 Rorug01G0414300.1 Rorug01G0414500 Rorug01G0414600 Rorug02G0235600 Rorug02G0307900 Rorug02G0583100 Rorug02G0583200 Rorug02G0583300 Rorug05G0398000 Rorug05G0398100 Rorug05G0398200 Rorug05G0580300 Rorug05G0590300 Rorug06G0116000 Rorug06G0116100 Rorug07G0096800 Rorug07G0097100.1 Rorug07G0097200 Rorug07G0098600 Rorug07G0098600 Rorug07G0098700 Rorug07G0099100 Rorug07G0106100 Rorug07G0106200 Rorug07G0106200 Rorug07G0106300 Rorug07G0157600 Rorug07G0157700 Rorug07G0157700 Rorug07G0157800
rosa_samantha Rh1AG255500 Rh1AG256700 Rh1BG225800 Rh1BG226200 Rh1BG230000 Rh1CG195300 Rh1CG238400 Rh1CG238500 Rh1CG238900 Rh1CG239000 Rh1CG239300 Rh1CG239400 Rh1CG239800 Rh1CG240000 Rh1CG240200 Rh1CG240300 Rh1CG244300 Rh1CG406900 Rh1CG407300 Rh1CG407400 Rh2CG343600 Rh2DG383200 Rh3BG205900 Rh4AG404400 Rh4BG415500 Rh5AG455200 Rh5AG455600 Rh5CG497000 Rh5CG497200 Rh7AG228800 Rh7AG230400 Rh7AG230800 Rh7AG231200 Rh7AG231600 Rh7AG231800 Rh7AG232100 Rh7AG241600 Rh7BG236200 Rh7CG238200 Rh7CG239100 Rh7CG243400 Rh7CG244900
rosa_wichuraiana Rw0G023040 Rw1G017780 Rw1G022320 Rw1G022340 Rw1G022410 Rw1G022420 Rw1G022440 Rw1G022460 Rw1G022490 Rw1G022500 Rw1G022530 Rw1G022550 Rw1G022560 Rw1G022600 Rw1G023060 Rw1G038150 Rw1G038160 Rw2G008210 Rw2G022350 Rw2G029290 Rw4G015050 Rw4G019850 Rw5G024060 Rw5G042460 Rw7G019160 Rw7G019460 Rw7G019690 Rw7G019830 Rw7G019860 Rw7G019880 Rw7G019890 Rw7G019930 Rw7G019990 Rw7G020460 Rw7G025100 Rw7G025120

Restriction Enzyme Sites

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Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 3771, 4343
Acc36I ACCTGC 1 cut(s) 183
AccB1I GGYRCC 1 cut(s) 111
AccBSI CCGCTC 1 cut(s) 4152
AccIII TCCGGA 1 cut(s) 493
AciI CCGC 5 cut(s) 219, 4152, 4296, 5892, 5911
AclWI GGATC 7 cut(s) 3784, 3797, 4137, 4785, 5639, 5708, 5810
AcoI YGGCCR 4 cut(s) 82, 253, 3805, 5789
AdeI CACNNNGTG 1 cut(s) 305
AfaI GTAC 3 cut(s) 5050, 5078, 5695
AfeI AGCGCT 1 cut(s) 423
AfiI CCNNNNNNNGG 9 cut(s) 121, 2917, 2989, 3133, 3781, 3782, 4967, 5382, 5552
AflIII ACRYGT 2 cut(s) 3826, 4569
AhdI GACNNNNNGTC 2 cut(s) 4904, 5645
AjnI CCWGG 3 cut(s) 156, 783, 4873
AloI GAACNNNNNNTCC 4 cut(s) 3312, 3344, 4185, 4217
Alw26I GTCTC 6 cut(s) 147, 3149, 3817, 4891, 5224, 5803
Alw44I GTGCAC 1 cut(s) 132
AlwI GGATC 7 cut(s) 3784, 3797, 4137, 4785, 5639, 5708, 5810
AlwNI CAGNNNCTG 2 cut(s) 4688, 5102
Ama87I CYCGRG 3 cut(s) 713, 732, 5800
Aor13HI TCCGGA 1 cut(s) 493
Aor51HI AGCGCT 1 cut(s) 423
AoxI GGCC 5 cut(s) 82, 253, 3805, 4517, 5789
ApaLI GTGCAC 1 cut(s) 132
ApeKI GCWGC 2 cut(s) 237, 364
ArsI GACNNNNNNTTYG 2 cut(s) 1568, 1600
Asp700I GAANNNNTTC 6 cut(s) 725, 1064, 1208, 1280, 1496, 4036
AspLEI GCGC 1 cut(s) 424
AspS9I GGNCC 4 cut(s) 382, 787, 4517, 4739
AsuII TTCGAA 6 cut(s) 1202, 1274, 1490, 4540, 4724, 4981
AvaI CYCGRG 3 cut(s) 713, 732, 5800
AvaII GGWCC 3 cut(s) 382, 787, 4739
BaeGI GKGCMC 2 cut(s) 136, 1444
BalI TGGCCA 2 cut(s) 255, 3807
BamHI GGATCC 1 cut(s) 3789
BanI GGYRCC 1 cut(s) 111
BarI GAAGNNNNNNTAC 2 cut(s) 4728, 4760
BbsI GAAGAC 3 cut(s) 875, 5114, 5391
BbvI GCAGC 2 cut(s) 224, 376
BccI CCATC 5 cut(s) 216, 4074, 4571, 5199, 5312
BceAI ACGGC 1 cut(s) 6005
BciT130I CCWGG 3 cut(s) 158, 785, 4875
BclI TGATCA 7 cut(s) 513, 556, 607, 658, 4063, 5806, 5982
BcoDI GTCTC 6 cut(s) 147, 3149, 3817, 4891, 5224, 5803
BfmI CTRYAG 2 cut(s) 877, 4638
BfoI RGCGCY 1 cut(s) 425
BfuAI ACCTGC 1 cut(s) 183
BglII AGATCT 6 cut(s) 457, 532, 1522, 3682, 4273, 4642
BisI GCNGC 2 cut(s) 238, 365
BlsI GCNGC 2 cut(s) 239, 366
Bme1390I CCNGG 3 cut(s) 158, 785, 4875
Bme18I GGWCC 3 cut(s) 382, 787, 4739
BmeRI GACNNNNNGTC 2 cut(s) 4904, 5645
BmeT110I CYCGRG 3 cut(s) 713, 732, 5800
BmgT120I GGNCC 4 cut(s) 382, 787, 4517, 4739
BmiI GGNNCC 4 cut(s) 70, 113, 3791, 4470
BmrFI CCNGG 3 cut(s) 158, 785, 4875
BmrI ACTGGG 3 cut(s) 489, 5469, 5541
BmuI ACTGGG 3 cut(s) 489, 5469, 5541
BoxI GACNNNNGTC 2 cut(s) 3829, 4324
BpiI GAAGAC 3 cut(s) 875, 5114, 5391
BplI GAGNNNNNCTC 4 cut(s) 120, 152, 278, 310
BpmI CTGGAG 5 cut(s) 305, 4896, 4915, 5529, 5687
Bpu14I TTCGAA 6 cut(s) 1202, 1274, 1490, 4540, 4724, 4981
BpuEI CTTGAG 4 cut(s) 137, 889, 5265, 5428
BsaBI GATNNNNATC 1 cut(s) 4068
BsaI GGTCTC 1 cut(s) 147
BsaWI WCCGGW 4 cut(s) 493, 4090, 4112, 4306
BsaXI ACNNNNNCTCC 2 cut(s) 144, 174
Bsc4I CCNNNNNNNGG 9 cut(s) 121, 2917, 2989, 3133, 3781, 3782, 4967, 5382, 5552
Bse1I ACTGG 9 cut(s) 256, 288, 484, 3808, 4729, 5464, 5536, 5695, 5788
Bse8I GATNNNNATC 1 cut(s) 4068
BseAI TCCGGA 1 cut(s) 493
BseBI CCWGG 3 cut(s) 158, 785, 4875
BseJI GATNNNNATC 1 cut(s) 4068
BseLI CCNNNNNNNGG 9 cut(s) 121, 2917, 2989, 3133, 3781, 3782, 4967, 5382, 5552
BseMII CTCAG 5 cut(s) 34, 400, 782, 4139, 5711
BseNI ACTGG 9 cut(s) 256, 288, 484, 3808, 4729, 5464, 5536, 5695, 5788
BseSI GKGCMC 2 cut(s) 136, 1444
BseXI GCAGC 2 cut(s) 224, 376
BseYI CCCAGC 2 cut(s) 3793, 3944
BshFI GGCC 5 cut(s) 84, 255, 3807, 4519, 5791
BshNI GGYRCC 1 cut(s) 111
BsiHKCI CYCGRG 3 cut(s) 713, 732, 5800
BsiSI CCGG 5 cut(s) 494, 4091, 4113, 4307, 4520
BslFI GGGAC 2 cut(s) 4206, 5871
BslI CCNNNNNNNGG 9 cut(s) 121, 2917, 2989, 3133, 3781, 3782, 4967, 5382, 5552
BsmAI GTCTC 6 cut(s) 147, 3149, 3817, 4891, 5224, 5803
BsmFI GGGAC 2 cut(s) 4206, 5871
BsmI GAATGC 7 cut(s) 725, 727, 1066, 1210, 1282, 1498, 5950
BsnI GGCC 5 cut(s) 84, 255, 3807, 4519, 5791
Bso31I GGTCTC 1 cut(s) 147
BsoBI CYCGRG 3 cut(s) 713, 732, 5800
Bsp119I TTCGAA 6 cut(s) 1202, 1274, 1490, 4540, 4724, 4981
Bsp13I TCCGGA 1 cut(s) 493
Bsp1407I TGTACA 1 cut(s) 5048
BspACI CCGC 5 cut(s) 219, 4152, 4296, 5892, 5911
BspANI GGCC 5 cut(s) 84, 255, 3807, 4519, 5791
BspCNI CTCAG 5 cut(s) 33, 399, 783, 4140, 5710
BspEI TCCGGA 1 cut(s) 493
BspLI GGNNCC 4 cut(s) 70, 113, 3791, 4470
BspMI ACCTGC 1 cut(s) 183
BspPI GGATC 7 cut(s) 3784, 3797, 4137, 4785, 5639, 5708, 5810
BspT104I TTCGAA 6 cut(s) 1202, 1274, 1490, 4540, 4724, 4981
BspT107I GGYRCC 1 cut(s) 111
BspTNI GGTCTC 1 cut(s) 147
BsrBI CCGCTC 1 cut(s) 4152
BsrGI TGTACA 1 cut(s) 5048
BsrI ACTGG 9 cut(s) 256, 288, 484, 3808, 4729, 5464, 5536, 5695, 5788
Bst2UI CCWGG 3 cut(s) 158, 785, 4875
Bst4CI ACNGT 3 cut(s) 68, 215, 4631
BstAUI TGTACA 1 cut(s) 5048
BstBI TTCGAA 6 cut(s) 1202, 1274, 1490, 4540, 4724, 4981
BstC8I GCNNGC 2 cut(s) 409, 5200
BstH2I RGCGCY 1 cut(s) 425
BstHHI GCGC 1 cut(s) 424
BstMAI GTCTC 6 cut(s) 147, 3149, 3817, 4891, 5224, 5803
BstNI CCWGG 3 cut(s) 158, 785, 4875
BstNSI RCATGY 4 cut(s) 29, 3830, 3897, 4573
BstPAI GACNNNNGTC 2 cut(s) 3829, 4324
BstSCI CCNGG 3 cut(s) 156, 783, 4873
BstSFI CTRYAG 2 cut(s) 877, 4638
BstSLI GKGCMC 2 cut(s) 136, 1444
BstV1I GCAGC 2 cut(s) 224, 376
BstV2I GAAGAC 3 cut(s) 875, 5114, 5391
BsuRI GGCC 5 cut(s) 84, 255, 3807, 4519, 5791
BtsIMutI CAGTG 2 cut(s) 477, 5103
BveI ACCTGC 1 cut(s) 183
Cac8I GCNNGC 2 cut(s) 409, 5200
CaiI CAGNNNCTG 2 cut(s) 4688, 5102
CfoI GCGC 1 cut(s) 424
Cfr13I GGNCC 4 cut(s) 382, 787, 4517, 4739
CseI GACGC 1 cut(s) 4755
CsiI ACCWGGT 1 cut(s) 156
Csp6I GTAC 3 cut(s) 5049, 5077, 5694
CspCI CAANNNNNGTGG 6 cut(s) 3331, 3366, 3691, 3726, 5584, 5619
CviQI GTAC 3 cut(s) 5049, 5077, 5694
DraI TTTAAA 4 cut(s) 331, 777, 3411, 5952
DraIII CACNNNGTG 1 cut(s) 305
DriI GACNNNNNGTC 2 cut(s) 4904, 5645
EaeI YGGCCR 4 cut(s) 82, 253, 3805, 5789
Eam1105I GACNNNNNGTC 2 cut(s) 4904, 5645
Eco31I GGTCTC 1 cut(s) 147
Eco32I GATATC 1 cut(s) 527
Eco47I GGWCC 3 cut(s) 382, 787, 4739
Eco47III AGCGCT 1 cut(s) 423
Eco88I CYCGRG 3 cut(s) 713, 732, 5800
EcoRI GAATTC 2 cut(s) 4158, 4445
EcoRII CCWGG 3 cut(s) 156, 783, 4873
EcoRV GATATC 1 cut(s) 527
EcoT22I ATGCAT 2 cut(s) 727, 5929
FalI AAGNNNNNCTT 2 cut(s) 5161, 5193
FaqI GGGAC 2 cut(s) 4206, 5871
FauI CCCGC 1 cut(s) 5885
FbaI TGATCA 7 cut(s) 513, 556, 607, 658, 4063, 5806, 5982
Fnu4HI GCNGC 2 cut(s) 238, 365
Fsp4HI GCNGC 2 cut(s) 238, 365
GlaI GCGC 1 cut(s) 423
GluI GCNGC 2 cut(s) 238, 365
GsaI CCCAGC 2 cut(s) 3797, 3948
GsuI CTGGAG 5 cut(s) 305, 4896, 4915, 5529, 5687
HaeII RGCGCY 1 cut(s) 425
HaeIII GGCC 5 cut(s) 84, 255, 3807, 4519, 5791
HapII CCGG 5 cut(s) 494, 4091, 4113, 4307, 4520
HgaI GACGC 1 cut(s) 4755
HhaI GCGC 1 cut(s) 424
Hin6I GCGC 1 cut(s) 422
HinP1I GCGC 1 cut(s) 422
HindIII AAGCTT 3 cut(s) 3967, 5053, 5084
HpaII CCGG 5 cut(s) 494, 4091, 4113, 4307, 4520
Hpy166II GTNNAC 5 cut(s) 134, 3860, 4976, 5750, 6014
Hpy8I GTNNAC 5 cut(s) 134, 3860, 4976, 5750, 6014
Hpy99I CGWCG 1 cut(s) 109
HpyCH4III ACNGT 3 cut(s) 68, 215, 4631
HpyCH4IV ACGT 2 cut(s) 99, 4195
HpySE526I ACGT 2 cut(s) 99, 4195
HspAI GCGC 1 cut(s) 422
Kpn2I TCCGGA 1 cut(s) 493
Ksp22I TGATCA 7 cut(s) 513, 556, 607, 658, 4063, 5806, 5982
LmnI GCTCC 5 cut(s) 483, 496, 849, 5004, 5706
Lsp1109I GCAGC 2 cut(s) 224, 376
MabI ACCWGGT 1 cut(s) 156
MaeII ACGT 2 cut(s) 99, 4195
MbiI CCGCTC 1 cut(s) 4152
MfeI CAATTG 4 cut(s) 42, 751, 4481, 5741
MlsI TGGCCA 2 cut(s) 255, 3807
MluNI TGGCCA 2 cut(s) 255, 3807
MlyI GAGTC 7 cut(s) 310, 1624, 1840, 2920, 2992, 3208, 3640
Mox20I TGGCCA 2 cut(s) 255, 3807
Mph1103I ATGCAT 2 cut(s) 727, 5929
MroI TCCGGA 1 cut(s) 493
MroXI GAANNNNTTC 6 cut(s) 725, 1064, 1208, 1280, 1496, 4036
MscI TGGCCA 2 cut(s) 255, 3807
MslI CAYNNNNRTG 4 cut(s) 90, 2945, 4568, 5185
Msp20I TGGCCA 2 cut(s) 255, 3807
MspI CCGG 5 cut(s) 494, 4091, 4113, 4307, 4520
MspR9I CCNGG 3 cut(s) 158, 785, 4875
MunI CAATTG 4 cut(s) 42, 751, 4481, 5741
Mva1269I GAATGC 7 cut(s) 725, 727, 1066, 1210, 1282, 1498, 5950
MvaI CCWGG 3 cut(s) 158, 785, 4875
NlaIV GGNNCC 4 cut(s) 70, 113, 3791, 4470
NmeAIII GCCGAG 2 cut(s) 60, 4727
NsiI ATGCAT 2 cut(s) 727, 5929
NspI RCATGY 4 cut(s) 29, 3830, 3897, 4573
NspV TTCGAA 6 cut(s) 1202, 1274, 1490, 4540, 4724, 4981
PaeR7I CTCGAG 1 cut(s) 5800
PciI ACATGT 2 cut(s) 3826, 4569
PctI GAATGC 7 cut(s) 725, 727, 1066, 1210, 1282, 1498, 5950
PdmI GAANNNNTTC 6 cut(s) 725, 1064, 1208, 1280, 1496, 4036
PfoI TCCNGGA 1 cut(s) 4873
PkrI GCNGC 2 cut(s) 239, 366
PleI GAGTC 7 cut(s) 310, 1624, 1840, 2920, 2992, 3208, 3640
PpsI GAGTC 7 cut(s) 310, 1624, 1840, 2920, 2992, 3208, 3640
PscI ACATGT 2 cut(s) 3826, 4569
PshAI GACNNNNGTC 2 cut(s) 3829, 4324
PsiI TTATAA 2 cut(s) 3771, 4343
Psp6I CCWGG 3 cut(s) 156, 783, 4873
PspFI CCCAGC 2 cut(s) 3793, 3944
PspGI CCWGG 3 cut(s) 156, 783, 4873
PspN4I GGNNCC 4 cut(s) 70, 113, 3791, 4470
PspPI GGNCC 4 cut(s) 382, 787, 4517, 4739
PstNI CAGNNNCTG 2 cut(s) 4688, 5102
RsaI GTAC 3 cut(s) 5050, 5078, 5695
RsaNI GTAC 3 cut(s) 5049, 5077, 5694
RseI CAYNNNNRTG 4 cut(s) 90, 2945, 4568, 5185
SatI GCNGC 2 cut(s) 238, 365
Sau96I GGNCC 4 cut(s) 382, 787, 4517, 4739
SchI GAGTC 7 cut(s) 310, 1624, 1840, 2920, 2992, 3208, 3640
ScrFI CCNGG 3 cut(s) 158, 785, 4875
SexAI ACCWGGT 1 cut(s) 156
SfcI CTRYAG 2 cut(s) 877, 4638
Sfr274I CTCGAG 1 cut(s) 5800
SfuI TTCGAA 6 cut(s) 1202, 1274, 1490, 4540, 4724, 4981
SinI GGWCC 3 cut(s) 382, 787, 4739
SlaI CTCGAG 1 cut(s) 5800
SmiMI CAYNNNNRTG 4 cut(s) 90, 2945, 4568, 5185
SmlI CTYRAG 5 cut(s) 116, 868, 5280, 5443, 5800
SmoI CTYRAG 5 cut(s) 116, 868, 5280, 5443, 5800
SsiI CCGC 5 cut(s) 219, 4152, 4296, 5892, 5911
SspI AATATT 4 cut(s) 326, 377, 981, 4870
StyD4I CCNGG 3 cut(s) 156, 783, 4873
TaaI ACNGT 3 cut(s) 68, 215, 4631
TaiI ACGT 2 cut(s) 102, 4198
TatI WGTACW 1 cut(s) 5048
TscAI CASTG 2 cut(s) 484, 5103
TseI GCWGC 2 cut(s) 237, 364
TspRI CASTG 2 cut(s) 484, 5103
VneI GTGCAC 1 cut(s) 132
VpaK11BI GGWCC 3 cut(s) 382, 787, 4739
XbaI TCTAGA 5 cut(s) 529, 4280, 4408, 4912, 5588
XceI RCATGY 4 cut(s) 29, 3830, 3897, 4573
XcmI CCANNNNNNNNNTGG 1 cut(s) 4608
XhoI CTCGAG 1 cut(s) 5800
XmnI GAANNNNTTC 6 cut(s) 725, 1064, 1208, 1280, 1496, 4036
Zsp2I ATGCAT 2 cut(s) 727, 5929
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.