RchiOBHm_Chr7g0207561

Leucine Rich repeat

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Reverse (-)
24847368 .. 24849284
1917 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ18573

Sequence Viewer

Length: 1917 bp
ATGAGGCACAAAGAATCCCACGACGAGGTTGGTGCTCTCCTCGTCCACAATCGCTTGATAGAAGTCAGGTCAAGGGACATCCCCGACGACCGCACCCGAACGGTGCTGGCATGCCCGCGCAGAAAAGAGACTGTTGACCAGCTGCAACAAAACTGGAGCCAAACAGGGTCGTTGCCAGATTTGGCACGTTTTTCAAAATTAAGAGTGTTAGAGCTTAGCTCGAATCAATTAAATGGGTCTGTATCCGAGAGTGTAGGGCAACTCTCTAGCCTTGAATTTTTATCTCTCTCCGGGAATTCTTTGACCGGTGTCATAACAGAATCCCACTTTCTGAACCTCTCTCGTGTACAGGATTTGCGTCTTTTTGGTAATCGTTTCTTTATCAACCTAAGCTCTGATTGGAATCCACCTTTTCAACTTGATTGGTTAGACATGTCCTCTTGTAAGGTGGGCCCAACTTTTCCGGAGTGGATTCTAACGCAAACAAGTCTTACCGGTCTTTATCTCTCTAATGCTGGACTATCAGGATCATTACCTATCAAAGTTTGGGATCTATTTTCTAGCATATCTACGTTAGATCTCTCCATGAACCAAATCCATGGGAAACTGCCAAATCTGTCAAGAACTAGCTTGATTTCTGTTGACTTGTCTTCCAATATATTTTCTGGTGCATTGCCATCAATATCTCCGATGCTCCAGGAGTTGGATCTCTGGAACAACATGTTTTCTGGGCCTTTGTCTTCCTTCTGTGCAATACTGCACTCTCCAAGGATGTCTTATCTCGACTTTTCTGAGAACCTACTGTCAGGGGAGCTTCCTAATTGTTTCATGCAATTTCGAGACTTGGAAATGTTGAATCTAGGAAAGAATAAATTATTTGGGACAATACCAAGCTGGTTAGGCAATCTAAACAGAATTCGGCTGTTGCGTTTACATGGAAACAACTTTTCAGGAGAAGTGCCTTCTTTAGAAAACTGTACAGATTTAGCAGTTGTTGACCTTGGGGATAATAACCTCTCTGGTCAAATACCAACATGGATGGGGCAAAGCCTAACAAATTTGGCGATTTTACGCTTACGGTCCAATGAGTTTAATGGAATCATACCCTTCTCCCTGTGCCGTCTAGCTACCATTCATGTCTTGGACCTCTCTCACAACAATATTTCCGGAGGCTTGCCACATTGCTTTAATAACATAACCGCTTTGGCTGATGATTATATTAGTGAATCTATCATTTTAGAACTCGTGTGGAAGGGAATAGAAATCGAGTTTGGGGAAAATCTTGCTGGTATGAGAAGCATTGACATGTCAAGAAACTATTTGGTGGGGGAAATTCCGCAGAGTATAGCAAGTATGACAGAGTTGATTTCACTGAATCTGTCAAGAAACTATTTGACAGGAAACCTTCCCGAAAACTTTGGTAACATGAAGATGTTGGAATCTCTTGATTTGTCAAGAAACCAGATATCTGGGAAAATTCCAGCAAGTTTTTTGAGACTAAACTTTCTCGGAGTCTTAGACGTATCACACAACCACTTGTCAGGAAGAATTCCGCTAGGCACCCAACTTCAGAGTTTTAATGATTCTGCATATATTGGAAATCTTGGACTTTGTGGACCACCACTGACACAAATTTGCCCAGGAGATGGAATAACTCAAGATGATGGAATCATGAGAGGCAGTGAAACTGATAACAAGGAACATGATAATGATGGTCTCATAAACCTGGGATTCTTTATCAGTAGATTCAGTACAGTATTGGGATTTGTCAGTGGATTCTGGATAGTCTGTGGCAGTTTACTACTGAAGAGCTCTTGGAGATACGCCTATTTCAAATTCTTGGATGATTCAAAAGATTTGATTTATGTCAAAATGGCTGTGGCTAAGGGAAAATTGCAGAGGAGCCTTCAAAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

638

Amino Acids

70.99

Weight (kDa)

5.67

Isoelectric Point (pI)

42.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_8 PF13855 455 - 513 1.1e-08 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000028)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g45420 FvH4_4g14031 FvH4_5g20780 FvH4_6g28530 FvH4_7g14020 FvH4_7g14030 FvH4_7g14040 FvH4_7g14050 FvH4_7g14060 FvH4_7g14070 FvH4_7g14090 FvH4_7g14110 FvH4_7g14140 FvH4_7g14450
malus_domestica MD00G1189100.v1.1 MD01G1018600.v1.1 MD01G1053800.v1.1 MD01G1053900.v1.1 MD01G1054000.v1.1 MD01G1054100.v1.1 MD01G1056700.v1.1 MD01G1057000.v1.1 MD01G1057300.v1.1 MD01G1057400.v1.1 MD01G1061600.v1.1 MD01G1061800.v1.1 MD01G1061900.v1.1 MD01G1062000.v1.1 MD01G1062400.v1.1 MD01G1062500.v1.1 MD01G1063200.v1.1 MD01G1063300.v1.1 MD01G1063400.v1.1 MD01G1063700.v1.1 MD01G1063900.v1.1 MD01G1064200.v1.1 MD01G1064300.v1.1 MD01G1064400.v1.1 MD01G1064600.v1.1 MD01G1064700.v1.1 MD01G1181100.v1.1 MD01G1212300.v1.1 MD01G1212500.v1.1 MD01G1212600.v1.1 MD02G1271900.v1.1 MD07G1136500.v1.1 MD07G1139300.v1.1 MD07G1141200.v1.1 MD07G1144700.v1.1 MD08G1144200.v1.1 MD14G1186300.v1.1 MD14G1186500.v1.1 MD14G1186700.v1.1 MD14G1186800.v1.1 MD15G1351300.v1.1 MD15G1439500.v1.1
prunus_persica Prupe.1G067000_v2.0.a1 Prupe.2G077400_v2.0.a1 Prupe.2G077700_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078600_v2.0.a1 Prupe.2G078800_v2.0.a1 Prupe.2G099600_v2.0.a1 Prupe.2G099700_v2.0.a1 Prupe.2G155100_v2.0.a1 Prupe.2G155500_v2.0.a1 Prupe.2G155600_v2.0.a1 Prupe.2G155800_v2.0.a1 Prupe.2G155900_v2.0.a1 Prupe.2G156100_v2.0.a1 Prupe.2G166100_v2.0.a1 Prupe.2G166300_v2.0.a1 Prupe.2G167500_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G168400_v2.0.a1 Prupe.2G168700_v2.0.a1 Prupe.2G168800_v2.0.a1 Prupe.2G169000_v2.0.a1 Prupe.2G169100_v2.0.a1 Prupe.2G169200_v2.0.a1 Prupe.2G169500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G172300_v2.0.a1 Prupe.2G304800_v2.0.a1 Prupe.4G264800_v2.0.a1 Prupe.4G265000_v2.0.a1 Prupe.5G051900_v2.0.a1 Prupe.5G052000_v2.0.a1
pyrus_communis pycom01g08380 pycom01g08430 pycom01g08490 pycom01g08520 pycom01g08540 pycom01g08550 pycom01g08600 pycom01g08630 pycom01g08660 pycom01g08720 pycom01g09180 pycom01g09200 pycom01g09210 pycom01g09270 pycom01g09280 pycom01g09300 pycom01g09380 pycom01g19110 pycom01g22260 pycom01g22310 pycom01g22330 pycom01g22350 pycom01g22360 pycom02g23250 pycom07g13420 pycom07g13670 pycom07g13900 pycom07g13910 pycom07g13960 pycom07g13970 pycom07g25680 pycom11g22830
rosa_chinensis RchiOBHm_Chr0c22g0500431 RchiOBHm_Chr0c22g0500441 RchiOBHm_Chr0c22g0500561 RchiOBHm_Chr0c22g0500571 RchiOBHm_Chr0c22g0500611 RchiOBHm_Chr0c22g0500621 RchiOBHm_Chr0c22g0500631 RchiOBHm_Chr0c22g0500681 RchiOBHm_Chr1g0348221 RchiOBHm_Chr1g0348251 RchiOBHm_Chr1g0352861 RchiOBHm_Chr1g0352871 RchiOBHm_Chr1g0352891 RchiOBHm_Chr1g0352901 RchiOBHm_Chr1g0354671 RchiOBHm_Chr1g0354701 RchiOBHm_Chr1g0354711 RchiOBHm_Chr1g0354751 RchiOBHm_Chr1g0354761 RchiOBHm_Chr1g0354841 RchiOBHm_Chr1g0354851 RchiOBHm_Chr1g0354881 RchiOBHm_Chr1g0354971 RchiOBHm_Chr1g0354981 RchiOBHm_Chr1g0354991 RchiOBHm_Chr1g0355001 RchiOBHm_Chr1g0355011 RchiOBHm_Chr1g0355021 RchiOBHm_Chr1g0355861 RchiOBHm_Chr1g0379671 RchiOBHm_Chr1g0379681 RchiOBHm_Chr2g0096591 RchiOBHm_Chr2g0132821 RchiOBHm_Chr3g0454901 RchiOBHm_Chr3g0472711 RchiOBHm_Chr4g0400791 RchiOBHm_Chr5g0069481 RchiOBHm_Chr5g0069511 RchiOBHm_Chr5g0069551 RchiOBHm_Chr6g0254651 RchiOBHm_Chr6g0259721 RchiOBHm_Chr7g0205911 RchiOBHm_Chr7g0206401 RchiOBHm_Chr7g0206571 RchiOBHm_Chr7g0206581 RchiOBHm_Chr7g0206621 RchiOBHm_Chr7g0206631 RchiOBHm_Chr7g0206641 RchiOBHm_Chr7g0206681 RchiOBHm_Chr7g0206691 RchiOBHm_Chr7g0206751 RchiOBHm_Chr7g0206761 RchiOBHm_Chr7g0206851 RchiOBHm_Chr7g0206911 RchiOBHm_Chr7g0206921 RchiOBHm_Chr7g0207001 RchiOBHm_Chr7g0207011 RchiOBHm_Chr7g0207031 RchiOBHm_Chr7g0207101 RchiOBHm_Chr7g0207161 RchiOBHm_Chr7g0207201 RchiOBHm_Chr7g0207271 RchiOBHm_Chr7g0207301 RchiOBHm_Chr7g0207311 RchiOBHm_Chr7g0207421 RchiOBHm_Chr7g0207481 RchiOBHm_Chr7g0207491 RchiOBHm_Chr7g0207501 RchiOBHm_Chr7g0207521 RchiOBHm_Chr7g0207531 RchiOBHm_Chr7g0207561 RchiOBHm_Chr7g0207571 RchiOBHm_Chr7g0207581 RchiOBHm_Chr7g0207601 RchiOBHm_Chr7g0207621 RchiOBHm_Chr7g0207631 RchiOBHm_Chr7g0207651 RchiOBHm_Chr7g0207661 RchiOBHm_Chr7g0207711 RchiOBHm_Chr7g0207761 RchiOBHm_Chr7g0207801 RchiOBHm_Chr7g0208821 RchiOBHm_Chr7g0208831 RchiOBHm_Chr7g0208841 RchiOBHm_Chr7g0213601 RchiOBHm_Chr7g0215981 RchiOBHm_Chr7g0216021
rosa_laevigata RLG00000003193 RLG00000003194 RLG00000003287 RLG00000003288 RLG00000003289 RLG00000003293 RLG00000003294 RLG00000003295 RLG00000003297 RLG00000003299 RLG00000003301 RLG00000003327 RLG00000003347 RLG00000016653 RLG00000018642 RLG00000018643 RLG00000019285 RLG00000022542 RLG00000026368 RLG00000026371 RLG00000028124 RLG00000028125 RLG00000028183 RLG00000028184 RLG00000028185 RLG00000028188 RLG00000028673 RLG00000029267 RLG00000029325 RLG00000029674 RLG00000032883 RLG00000036055 RLG00000036058 RLG00000036065 RLG00000036068 RLG00000036071 RLG00000036072 RLG00000036075 RLG00000036076
rosa_multiflora Rmu_co8250183.1_g000001 Rmu_co8271981.1_g000001 Rmu_co8410829.1_g000001 Rmu_co8432879.1_g000001 Rmu_co8441941.1_g000001 Rmu_sc0000076.1_g000031 Rmu_sc0000738.1_g000038 Rmu_sc0000848.1_g000003 Rmu_sc0000848.1_g000014 Rmu_sc0000848.1_g000015 Rmu_sc0000848.1_g000016 Rmu_sc0001264.1_g000001 Rmu_sc0002284.1_g000018 Rmu_sc0002356.1_g000011 Rmu_sc0003020.1_g000003 Rmu_sc0003115.1_g000001 Rmu_sc0003115.1_g000002 Rmu_sc0003115.1_g000003 Rmu_sc0003115.1_g000004 Rmu_sc0003115.1_g000005 Rmu_sc0003115.1_g000008 Rmu_sc0003115.1_g000010 Rmu_sc0003115.1_g000011 Rmu_sc0003115.1_g000014 Rmu_sc0003565.1_g000002 Rmu_sc0003652.1_g000013 Rmu_sc0003652.1_g000015 Rmu_sc0003652.1_g000016 Rmu_sc0003652.1_g000019 Rmu_sc0003940.1_g000001 Rmu_sc0003940.1_g000004 Rmu_sc0003940.1_g000009 Rmu_sc0004084.1_g000010 Rmu_sc0004705.1_g000021 Rmu_sc0004972.1_g000007 Rmu_sc0004987.1_g000002 Rmu_sc0004987.1_g000006 Rmu_sc0005065.1_g000018 Rmu_sc0005065.1_g000029 Rmu_sc0005391.1_g000002 Rmu_sc0005633.1_g000003 Rmu_sc0005633.1_g000008 Rmu_sc0006632.1_g000014 Rmu_sc0006632.1_g000018 Rmu_sc0006681.1_g000010 Rmu_sc0006681.1_g000011 Rmu_sc0006733.1_g000003 Rmu_sc0007385.1_g000005 Rmu_sc0007385.1_g000007 Rmu_sc0007385.1_g000009 Rmu_sc0007385.1_g000016 Rmu_sc0007645.1_g000002 Rmu_sc0007645.1_g000003 Rmu_sc0007645.1_g000022 Rmu_sc0007828.1_g000008 Rmu_sc0008509.1_g000003 Rmu_sc0008509.1_g000015 Rmu_sc0008509.1_g000016 Rmu_sc0008509.1_g000020 Rmu_sc0008509.1_g000030 Rmu_sc0008509.1_g000041 Rmu_sc0008756.1_g000001 Rmu_sc0008756.1_g000003 Rmu_sc0013028.1_g000002 Rmu_sc0013028.1_g000003 Rmu_sc0013028.1_g000005 Rmu_sc0013160.1_g000001 Rmu_sc0014454.1_g000009 Rmu_sc0014455.1_g000007 Rmu_sc0014659.1_g000004 Rmu_sc0017798.1_g000002 Rmu_sc0017798.1_g000004 Rmu_sc0029608.1_g000001 Rmu_sc0037861.1_g000001 Rmu_sc0038750.1_g000001 Rmu_sc0042995.1_g000001 Rmu_ssc0000161.1_g000017
rosa_roxburghii Rroxscaffold_1G00009180 Rroxscaffold_1G00009190 Rroxscaffold_1G00011450 Rroxscaffold_1G00011480 Rroxscaffold_2G00111660 Rroxscaffold_2G00113570 Rroxscaffold_2G00122140 Rroxscaffold_3G00243730 Rroxscaffold_3G00245750 Rroxscaffold_3G00245760 Rroxscaffold_3G00250220 Rroxscaffold_3G00251160 Rroxscaffold_3G00251270 Rroxscaffold_3G00251280 Rroxscaffold_3G00251300 Rroxscaffold_3G00251340 Rroxscaffold_3G00251350 Rroxscaffold_3G00251390 Rroxscaffold_3G00251400 Rroxscaffold_3G00251560 Rroxscaffold_3G00251570 Rroxscaffold_3G00251870 Rroxscaffold_3G00252200 Rroxscaffold_3G00252210 Rroxscaffold_4G00279970 Rroxscaffold_4G00299970 Rroxscaffold_4G00300760 Rroxscaffold_4G00300780 Rroxscaffold_4G00300810 Rroxscaffold_4G00300850 Rroxscaffold_4G00307080 Rroxscaffold_4G00307100 Rroxscaffold_4G00313990 Rroxscaffold_6G00405080
rosa_rugosa Rorug01G0193600 Rorug01G0193700 Rorug01G0243800 Rorug01G0244000 Rorug01G0244000 Rorug01G0244400 Rorug01G0414300.1 Rorug01G0414500 Rorug01G0414600 Rorug02G0235600 Rorug02G0307900 Rorug02G0583100 Rorug02G0583200 Rorug02G0583300 Rorug05G0398000 Rorug05G0398100 Rorug05G0398200 Rorug05G0580300 Rorug05G0590300 Rorug06G0116000 Rorug06G0116100 Rorug07G0096800 Rorug07G0097100.1 Rorug07G0097200 Rorug07G0098600 Rorug07G0098600 Rorug07G0098700 Rorug07G0099100 Rorug07G0106100 Rorug07G0106200 Rorug07G0106200 Rorug07G0106300 Rorug07G0157600 Rorug07G0157700 Rorug07G0157700 Rorug07G0157800
rosa_samantha Rh1AG255500 Rh1AG256700 Rh1BG225800 Rh1BG226200 Rh1BG230000 Rh1CG195300 Rh1CG238400 Rh1CG238500 Rh1CG238900 Rh1CG239000 Rh1CG239300 Rh1CG239400 Rh1CG239800 Rh1CG240000 Rh1CG240200 Rh1CG240300 Rh1CG244300 Rh1CG406900 Rh1CG407300 Rh1CG407400 Rh2CG343600 Rh2DG383200 Rh3BG205900 Rh4AG404400 Rh4BG415500 Rh5AG455200 Rh5AG455600 Rh5CG497000 Rh5CG497200 Rh7AG228800 Rh7AG230400 Rh7AG230800 Rh7AG231200 Rh7AG231600 Rh7AG231800 Rh7AG232100 Rh7AG241600 Rh7BG236200 Rh7CG238200 Rh7CG239100 Rh7CG243400 Rh7CG244900
rosa_wichuraiana Rw0G023040 Rw1G017780 Rw1G022320 Rw1G022340 Rw1G022410 Rw1G022420 Rw1G022440 Rw1G022460 Rw1G022490 Rw1G022500 Rw1G022530 Rw1G022550 Rw1G022560 Rw1G022600 Rw1G023060 Rw1G038150 Rw1G038160 Rw2G008210 Rw2G022350 Rw2G029290 Rw4G015050 Rw4G019850 Rw5G024060 Rw5G042460 Rw7G019160 Rw7G019460 Rw7G019690 Rw7G019830 Rw7G019860 Rw7G019880 Rw7G019890 Rw7G019930 Rw7G019990 Rw7G020460 Rw7G025100 Rw7G025120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1559
AccB7I CCANNNNNTGG 2 cut(s) 703, 1646
AccII CGCG 1 cut(s) 118
AccIII TCCGGA 2 cut(s) 463, 1166
AciI CCGC 5 cut(s) 91, 116, 1200, 1337, 1553
AclWI GGATC 3 cut(s) 535, 558, 714
AcsI RAATTY 9 cut(s) 275, 295, 915, 1057, 1332, 1476, 1548, 1632, 1835
AcuI CTGAAG 2 cut(s) 1553, 1826
AfaI GTAC 3 cut(s) 348, 979, 1753
AfiI CCNNNNNNNGG 3 cut(s) 25, 703, 1646
AflIII ACRYGT 3 cut(s) 432, 720, 1305
AgeI ACCGGT 2 cut(s) 305, 494
AgsI TTSAA 7 cut(s) 195, 275, 416, 856, 1834, 1851, 1910
AjnI CCWGG 3 cut(s) 696, 1639, 1725
AjuI GAANNNNNNNTTGG 2 cut(s) 1254, 1286
AluBI AGCT 9 cut(s) 142, 214, 219, 393, 630, 814, 894, 1127, 1812
AluI AGCT 9 cut(s) 142, 214, 219, 393, 630, 814, 894, 1127, 1812
Alw21I GWGCWC 2 cut(s) 37, 1814
Alw26I GTCTC 4 cut(s) 122, 834, 1489, 1721
AlwI GGATC 3 cut(s) 535, 558, 714
Aor13HI TCCGGA 2 cut(s) 463, 1166
AoxI GGCC 2 cut(s) 451, 731
ApaI GGGCCC 1 cut(s) 455
ApeKI GCWGC 1 cut(s) 142
ApoI RAATTY 9 cut(s) 275, 295, 915, 1057, 1332, 1476, 1548, 1632, 1835
AsiGI ACCGGT 2 cut(s) 305, 494
AspLEI GCGC 1 cut(s) 120
AspS9I GGNCC 6 cut(s) 451, 452, 731, 1080, 1144, 1616
AsuC2I CCSGG 1 cut(s) 292
AvaII GGWCC 3 cut(s) 1080, 1144, 1616
BaeGI GKGCMC 1 cut(s) 455
BanI GGYRCC 1 cut(s) 1559
BanII GRGCYC 2 cut(s) 455, 1814
BauI CACGAG 2 cut(s) 342, 1244
BbsI GAAGAC 2 cut(s) 642, 732
Bbv12I GWGCWC 2 cut(s) 37, 1814
BbvI GCAGC 1 cut(s) 129
BccI CCATC 5 cut(s) 685, 1033, 1640, 1658, 1706
BceAI ACGGC 1 cut(s) 1104
BcgI CGANNNNNNTGC 2 cut(s) 14, 48
BciT130I CCWGG 3 cut(s) 698, 1641, 1727
BciVI GTATCC 1 cut(s) 253
BcnI CCSGG 1 cut(s) 292
BcoDI GTCTC 4 cut(s) 122, 834, 1489, 1721
BfaI CTAG 6 cut(s) 267, 561, 627, 860, 1124, 1556
BfuI GTATCC 1 cut(s) 253
BglII AGATCT 1 cut(s) 577
BisI GCNGC 1 cut(s) 143
BlpI GCTNAGC 1 cut(s) 215
BlsI GCNGC 1 cut(s) 144
Bme1390I CCNGG 4 cut(s) 292, 698, 1641, 1727
Bme18I GGWCC 3 cut(s) 1080, 1144, 1616
BmgT120I GGNCC 6 cut(s) 451, 452, 731, 1080, 1144, 1616
BmiI GGNNCC 4 cut(s) 158, 453, 1561, 1904
BmrFI CCNGG 4 cut(s) 292, 698, 1641, 1727
BmsI GCATC 1 cut(s) 681
BoxI GACNNNNGTC 1 cut(s) 308
BpiI GAAGAC 2 cut(s) 642, 732
BplI GAGNNNNNCTC 2 cut(s) 203, 235
BpmI CTGGAG 2 cut(s) 175, 680
Bpu10I CCTNAGC 2 cut(s) 389, 1884
Bpu1102I GCTNAGC 1 cut(s) 215
BpuEI CTTGAG 1 cut(s) 1641
BpuMI CCSGG 1 cut(s) 292
BsaBI GATNNNNATC 1 cut(s) 402
BsaI GGTCTC 1 cut(s) 1721
BsaJI CCNNGG 5 cut(s) 598, 767, 1000, 1639, 1726
BsaWI WCCGGW 4 cut(s) 305, 463, 494, 1166
Bsc4I CCNNNNNNNGG 3 cut(s) 25, 703, 1646
Bse118I RCCGGY 2 cut(s) 305, 494
Bse1I ACTGG 1 cut(s) 158
Bse3DI GCAATG 2 cut(s) 671, 1180
Bse8I GATNNNNATC 1 cut(s) 402
BseAI TCCGGA 2 cut(s) 463, 1166
BseBI CCWGG 3 cut(s) 698, 1641, 1727
BseDI CCNNGG 5 cut(s) 598, 767, 1000, 1639, 1726
BseGI GGATG 4 cut(s) 78, 777, 1044, 1849
BseJI GATNNNNATC 1 cut(s) 402
BseLI CCNNNNNNNGG 3 cut(s) 25, 703, 1646
BseMI GCAATG 2 cut(s) 671, 1180
BseMII CTCAG 1 cut(s) 783
BseNI ACTGG 1 cut(s) 158
BseRI GAGGAG 2 cut(s) 29, 1915
BseSI GKGCMC 1 cut(s) 455
BseXI GCAGC 1 cut(s) 129
BsgI GTGCAG 1 cut(s) 743
Bsh1236I CGCG 1 cut(s) 118
Bsh1285I CGRYCG 1 cut(s) 91
BshFI GGCC 2 cut(s) 453, 733
BshNI GGYRCC 1 cut(s) 1559
BshTI ACCGGT 2 cut(s) 305, 494
BsiEI CGRYCG 1 cut(s) 91
BsiHKAI GWGCWC 2 cut(s) 37, 1814
BsiSI CCGG 5 cut(s) 291, 306, 464, 495, 1167
BslFI GGGAC 2 cut(s) 89, 895
BslI CCNNNNNNNGG 3 cut(s) 25, 703, 1646
BsmAI GTCTC 4 cut(s) 122, 834, 1489, 1721
BsmFI GGGAC 2 cut(s) 89, 895
BsnI GGCC 2 cut(s) 453, 733
Bso31I GGTCTC 1 cut(s) 1721
Bsp120I GGGCCC 1 cut(s) 451
Bsp1286I GDGCHC 3 cut(s) 37, 455, 1814
Bsp13I TCCGGA 2 cut(s) 463, 1166
Bsp1407I TGTACA 2 cut(s) 346, 977
Bsp143I GATC 4 cut(s) 527, 550, 577, 706
Bsp1720I GCTNAGC 1 cut(s) 215
Bsp19I CCATGG 1 cut(s) 598
BspACI CCGC 5 cut(s) 91, 116, 1200, 1337, 1553
BspANI GGCC 2 cut(s) 453, 733
BspCNI CTCAG 1 cut(s) 784
BspEI TCCGGA 2 cut(s) 463, 1166
BspFNI CGCG 1 cut(s) 118
BspHI TCATGA 1 cut(s) 1671
BspLI GGNNCC 4 cut(s) 158, 453, 1561, 1904
BspPI GGATC 3 cut(s) 535, 558, 714
BspQI GCTCTTC 1 cut(s) 1802
BspT107I GGYRCC 1 cut(s) 1559
BspTNI GGTCTC 1 cut(s) 1721
BsrDI GCAATG 2 cut(s) 671, 1180
BsrFI RCCGGY 2 cut(s) 305, 494
BsrGI TGTACA 2 cut(s) 346, 977
BsrI ACTGG 1 cut(s) 158
BssAI RCCGGY 2 cut(s) 305, 494
BssECI CCNNGG 5 cut(s) 598, 767, 1000, 1639, 1726
BssMI GATC 4 cut(s) 527, 550, 577, 706
BssSI CACGAG 2 cut(s) 342, 1244
BssT1I CCWWGG 3 cut(s) 598, 767, 1000
Bst2BI CACGAG 2 cut(s) 342, 1244
Bst2UI CCWGG 3 cut(s) 698, 1641, 1727
Bst4CI ACNGT 6 cut(s) 103, 133, 804, 977, 1080, 1756
Bst6I CTCTTC 1 cut(s) 1802
BstAUI TGTACA 2 cut(s) 346, 977
BstC8I GCNNGC 4 cut(s) 108, 112, 116, 1175
BstDEI CTNAG 5 cut(s) 215, 389, 792, 1516, 1884
BstDSI CCRYGG 1 cut(s) 598
BstF5I GGATG 4 cut(s) 78, 777, 1044, 1849
BstFNI CGCG 1 cut(s) 118
BstHHI GCGC 1 cut(s) 120
BstKTI GATC 4 cut(s) 530, 553, 580, 709
BstMAI GTCTC 4 cut(s) 122, 834, 1489, 1721
BstMBI GATC 4 cut(s) 527, 550, 577, 706
BstMCI CGRYCG 1 cut(s) 91
BstMWI GCNNNNNNNGC 1 cut(s) 900
BstNI CCWGG 3 cut(s) 698, 1641, 1727
BstNSI RCATGY 4 cut(s) 114, 436, 724, 1309
BstPAI GACNNNNGTC 1 cut(s) 308
BstSCI CCNGG 4 cut(s) 290, 696, 1639, 1725
BstSLI GKGCMC 1 cut(s) 455
BstUI CGCG 1 cut(s) 118
BstV1I GCAGC 1 cut(s) 129
BstV2I GAAGAC 2 cut(s) 642, 732
BstX2I RGATCY 3 cut(s) 550, 577, 706
BstXI CCANNNNNNTGG 2 cut(s) 599, 1469
BstYI RGATCY 3 cut(s) 550, 577, 706
BsuI GTATCC 1 cut(s) 253
BsuRI GGCC 2 cut(s) 453, 733
BtgI CCRYGG 1 cut(s) 598
BtsCI GGATG 4 cut(s) 78, 777, 1044, 1849
BtsI GCAGTG 1 cut(s) 1687
BtsIMutI CAGTG 4 cut(s) 1370, 1622, 1687, 1777
Cac8I GCNNGC 4 cut(s) 108, 112, 116, 1175
CciI TCATGA 1 cut(s) 1671
CfoI GCGC 1 cut(s) 120
Cfr10I RCCGGY 2 cut(s) 305, 494
Cfr13I GGNCC 6 cut(s) 451, 452, 731, 1080, 1144, 1616
CseI GACGC 1 cut(s) 347
Csp6I GTAC 3 cut(s) 347, 978, 1752
CspAI ACCGGT 2 cut(s) 305, 494
CviQI GTAC 3 cut(s) 347, 978, 1752
DdeI CTNAG 5 cut(s) 215, 389, 792, 1516, 1884
DpnI GATC 4 cut(s) 529, 552, 579, 708
DpnII GATC 4 cut(s) 527, 550, 577, 706
Eam1104I CTCTTC 1 cut(s) 1802
EarI CTCTTC 1 cut(s) 1802
Ecl136II GAGCTC 1 cut(s) 1812
Eco130I CCWWGG 3 cut(s) 598, 767, 1000
Eco24I GRGCYC 2 cut(s) 455, 1814
Eco31I GGTCTC 1 cut(s) 1721
Eco32I GATATC 1 cut(s) 1467
Eco47I GGWCC 3 cut(s) 1080, 1144, 1616
Eco53kI GAGCTC 1 cut(s) 1812
Eco57I CTGAAG 2 cut(s) 1553, 1826
EcoICRI GAGCTC 1 cut(s) 1812
EcoRI GAATTC 3 cut(s) 295, 915, 1548
EcoRII CCWGG 3 cut(s) 696, 1639, 1725
EcoRV GATATC 1 cut(s) 1467
EcoT14I CCWWGG 3 cut(s) 598, 767, 1000
EcoT38I GRGCYC 2 cut(s) 455, 1814
ErhI CCWWGG 3 cut(s) 598, 767, 1000
FalI AAGNNNNNCTT 2 cut(s) 760, 792
FaqI GGGAC 2 cut(s) 89, 895
FauI CCCGC 1 cut(s) 123
Fnu4HI GCNGC 1 cut(s) 143
FokI GGATG 4 cut(s) 65, 784, 1051, 1856
FriOI GRGCYC 2 cut(s) 455, 1814
Fsp4HI GCNGC 1 cut(s) 143
FspBI CTAG 6 cut(s) 267, 561, 627, 860, 1124, 1556
GlaI GCGC 1 cut(s) 119
GluI GCNGC 1 cut(s) 143
GsuI CTGGAG 2 cut(s) 175, 680
HaeIII GGCC 2 cut(s) 453, 733
HapII CCGG 5 cut(s) 291, 306, 464, 495, 1167
HgaI GACGC 1 cut(s) 347
HhaI GCGC 1 cut(s) 120
Hin6I GCGC 1 cut(s) 118
HinP1I GCGC 1 cut(s) 118
HincII GTYRAC 3 cut(s) 136, 643, 997
HindII GTYRAC 3 cut(s) 136, 643, 997
HpaII CCGG 5 cut(s) 291, 306, 464, 495, 1167
Hpy166II GTNNAC 8 cut(s) 46, 136, 347, 643, 932, 997, 1616, 1799
Hpy188I TCNGA 7 cut(s) 247, 333, 397, 690, 793, 1511, 1572
Hpy8I GTNNAC 8 cut(s) 46, 136, 347, 643, 932, 997, 1616, 1799
Hpy99I CGWCG 2 cut(s) 26, 89
HpyAV CCTTC 6 cut(s) 754, 972, 1117, 1246, 1415, 1916
HpyCH4III ACNGT 6 cut(s) 103, 133, 804, 977, 1080, 1756
HpyCH4IV ACGT 3 cut(s) 187, 572, 1521
HpyCH4V TGCA 7 cut(s) 145, 671, 752, 760, 832, 1589, 1897
HpyF10VI GCNNNNNNNGC 1 cut(s) 900
HpyF3I CTNAG 5 cut(s) 215, 389, 792, 1516, 1884
HpySE526I ACGT 3 cut(s) 187, 572, 1521
HspAI GCGC 1 cut(s) 118
Kpn2I TCCGGA 2 cut(s) 463, 1166
Kzo9I GATC 4 cut(s) 527, 550, 577, 706
LguI GCTCTTC 1 cut(s) 1802
LmnI GCTCC 4 cut(s) 156, 699, 811, 1902
Lsp1109I GCAGC 1 cut(s) 129
LweI GCATC 1 cut(s) 681
MaeI CTAG 6 cut(s) 267, 561, 627, 860, 1124, 1556
MaeII ACGT 3 cut(s) 187, 572, 1521
MaeIII GTNAC 1 cut(s) 1421
MalI GATC 4 cut(s) 529, 552, 579, 708
MboI GATC 4 cut(s) 527, 550, 577, 706
MboII GAAGA 5 cut(s) 642, 732, 1441, 1557, 1819
MflI RGATCY 3 cut(s) 550, 577, 706
MhlI GDGCHC 3 cut(s) 37, 455, 1814
MlyI GAGTC 1 cut(s) 1521
MmeI TCCRAC 2 cut(s) 684, 1416
MnlI CCTC 9 cut(s) 19, 50, 347, 448, 1025, 1157, 1163, 1670, 1893
MroI TCCGGA 2 cut(s) 463, 1166
MseI TTAA 5 cut(s) 200, 230, 1092, 1188, 1578
MslI CAYNNNNRTG 3 cut(s) 1304, 1430, 1707
MspA1I CMGCKG 1 cut(s) 142
MspI CCGG 5 cut(s) 291, 306, 464, 495, 1167
MspR9I CCNGG 4 cut(s) 292, 698, 1641, 1727
MvaI CCWGG 3 cut(s) 698, 1641, 1727
MvnI CGCG 1 cut(s) 118
MwoI GCNNNNNNNGC 1 cut(s) 900
NciI CCSGG 1 cut(s) 292
NcoI CCATGG 1 cut(s) 598
NdeII GATC 4 cut(s) 527, 550, 577, 706
NlaIV GGNNCC 4 cut(s) 158, 453, 1561, 1904
NspI RCATGY 4 cut(s) 114, 436, 724, 1309
PaeI GCATGC 1 cut(s) 114
PagI TCATGA 1 cut(s) 1671
PciI ACATGT 3 cut(s) 432, 720, 1305
PciSI GCTCTTC 1 cut(s) 1802
PcsI WCGNNNNNNNCGW 1 cut(s) 925
PflMI CCANNNNNTGG 2 cut(s) 703, 1646
PfoI TCCNGGA 2 cut(s) 290, 696
PinAI ACCGGT 2 cut(s) 305, 494
PkrI GCNGC 1 cut(s) 144
PleI GAGTC 1 cut(s) 1520
PpsI GAGTC 1 cut(s) 1520
PscI ACATGT 3 cut(s) 432, 720, 1305
PshAI GACNNNNGTC 1 cut(s) 308
Psp124BI GAGCTC 1 cut(s) 1814
Psp6I CCWGG 3 cut(s) 696, 1639, 1725
PspGI CCWGG 3 cut(s) 696, 1639, 1725
PspN4I GGNNCC 4 cut(s) 158, 453, 1561, 1904
PspOMI GGGCCC 1 cut(s) 451
PspPI GGNCC 6 cut(s) 451, 452, 731, 1080, 1144, 1616
PsuI RGATCY 3 cut(s) 550, 577, 706
PvuII CAGCTG 1 cut(s) 142
RsaI GTAC 3 cut(s) 348, 979, 1753
RsaNI GTAC 3 cut(s) 347, 978, 1752
RseI CAYNNNNRTG 3 cut(s) 1304, 1430, 1707
SacI GAGCTC 1 cut(s) 1814
SapI GCTCTTC 1 cut(s) 1802
SaqAI TTAA 5 cut(s) 200, 230, 1092, 1188, 1578
SatI GCNGC 1 cut(s) 143
Sau3AI GATC 4 cut(s) 527, 550, 577, 706
Sau96I GGNCC 6 cut(s) 451, 452, 731, 1080, 1144, 1616
SchI GAGTC 1 cut(s) 1521
ScrFI CCNGG 4 cut(s) 292, 698, 1641, 1727
SduI GDGCHC 3 cut(s) 37, 455, 1814
SfaNI GCATC 1 cut(s) 681
SinI GGWCC 3 cut(s) 1080, 1144, 1616
SmiMI CAYNNNNRTG 3 cut(s) 1304, 1430, 1707
SmlI CTYRAG 1 cut(s) 1656
SmoI CTYRAG 1 cut(s) 1656
SphI GCATGC 1 cut(s) 114
SsiI CCGC 5 cut(s) 91, 116, 1200, 1337, 1553
SspI AATATT 1 cut(s) 1162
SspMI CTAG 6 cut(s) 267, 561, 627, 860, 1124, 1556
SstI GAGCTC 1 cut(s) 1814
StyD4I CCNGG 4 cut(s) 290, 696, 1639, 1725
StyI CCWWGG 3 cut(s) 598, 767, 1000
TaaI ACNGT 6 cut(s) 103, 133, 804, 977, 1080, 1756
TaiI ACGT 3 cut(s) 190, 575, 1524
TaqI TCGA 4 cut(s) 221, 783, 838, 1266
TatI WGTACW 3 cut(s) 346, 977, 1751
Tru1I TTAA 5 cut(s) 200, 230, 1092, 1188, 1578
Tru9I TTAA 5 cut(s) 200, 230, 1092, 1188, 1578
TscAI CASTG 4 cut(s) 1377, 1629, 1687, 1777
TseI GCWGC 1 cut(s) 142
TspDTI ATGAA 4 cut(s) 602, 817, 1124, 1442
TspRI CASTG 4 cut(s) 1377, 1629, 1687, 1777
Van91I CCANNNNNTGG 2 cut(s) 703, 1646
VpaK11BI GGWCC 3 cut(s) 1080, 1144, 1616
XapI RAATTY 9 cut(s) 275, 295, 915, 1057, 1332, 1476, 1548, 1632, 1835
XceI RCATGY 4 cut(s) 114, 436, 724, 1309
XcmI CCANNNNNNNNNTGG 2 cut(s) 26, 1138
XspI CTAG 6 cut(s) 267, 561, 627, 860, 1124, 1556
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.