Rorug01G0243800

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
Physical Location & Seq
Forward (+)
34950185 .. 34954021
3837 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0243800.1

Sequence Viewer

Length: 2250 bp
ATGACTTCCTCTTCCTCCGTCACTCTCTCCCAGGCCCTCCTGGCCCGGGCCATTTCCCACCACGGCTCCAACTCCACCTCCGACCGCGTCTCCCTCTCCTCCGCCCTCTCCCTCCCCACCTTCTCCGGCCTCAAATCCACCTCATCGTCCGCGAGTTCTGCATCATCCAAGGTGTCCCGTGTCCCCAGGCGCCGGTTGGGAGCCGCCAGGCCGGTCCGGGCTGCTGCCGTGGAGACTCTCGACAAGACTACCGAGACCTCGCTGGTGGAGAAGTCTGTGAACACGATCCGGTTCTTGGCGATTGATGCTGTCGAGAAGGCTAACTCGGGTCACCCCGGTCTGCCCATGGGTTGTGCTCCGATGGGTCATATTTTGTATGACGAGATCATGAGGTATAACCCCAAGAATCCTTACTGGTTCAACCGTGATAGGTTCGTGTTGTCTGCTGGACACGGGTGTATGTTGCAGTACGCTCTGCTTCACCTTGCGGGTTACGACAGTGTCAAGGAAGAGGACTTGAAGGGCTTCAGGCAATGGGGAAGCAAGACCCCAGGACACCCTGAGAACTTTGAGACACCTGGTGTTGAAGTCACCACCGGTCCTTTGGGGCAAGGTATTGCAAATGCTGTTGGTCTGGCCCTTGCTGAGAAGCACTTGGCTGCACGTTACAACAAGCCAGACAGTGAGATTGTTGACCACTACACATATTGTATATTGGGTGATGGTTGTCAGATGGAGGGTATTTCTAATGAAGTTGCTTCCCTTGCTGGGCATTGGGGACTTGGAAAGCTGATAGCCTTCTACGACGACAACCACATTTCCATTGATGGAGACACTGAGATTGCATTCACCGAGAGTGTTGATACCCGTTTTGAGGGTCTCGGGTGGCACGTTATCTGGGTGAAGAATGGAAATACCGGGTATGATGAGATTAGAGCTGCCATTAAGGAAGCAAAGGCTGTGACAGACAAGCCCACTTTGATAAAGGTGACAACAACTATTGGTTTTGGATCTCCAAACAAGGCAAACTCATACAGTGTCCATGGTGCTGCACTGGGTGCTAAGGAAGTTGATGCTACCAGACAGAACCTTGGATGGCCATATGAGCCTTTCCACGTGCCAGAGGATGTTAAAAGTCACTGGAGTCGCCATACTGCAGAAGGTTCAGCTCTCGAAGCTGAATGGAATGCCAAGTTTGCTGAATATGAGAAGAAGTACGCAGAGGAAGCTGCAGAGCTGAAGTCCATCATCACTGGTGAGCTGCCGGCTGGTTGGGAAAAGGCACTCCCGACTTACACTCCAGAAGTCCCAGCTGATGCTACCAGGAATTTATCTCAGGCAAACCTCAATGCCCTTGCAAAAGTTCTTCCTGGTCTTGTTGGTGGCAGTGCAGACCTTGCTTCTTCCAACATGACTTTGATGAAAATGTTTGGAGATTTCCAGAAGGGTACCCCAGAAGAACGCAATATTAGGTTTGGTGTTAGGGAGCATGGGATGGGAGCCATCTGCAATGGAATCGCTCTTCACAGCCCTGGACTTATTCCGTATTGTGCCACTTTCTTTGTTTTCACTGACTACATGAGAGCTGCCATAAGGATCTCTGCATTGGCAGAAGCTCGAGTTATCTATGTTATGACCCACGATTCAATTGGACTTGGAGAAGATGGACCGACCCATCAACCGATTGAACACTTGGCAAGTTTCCGGGCAATGCCTAACATTTTGATGCTCCGACCAGCTGATGGGAATGAGACTGCCGGGTCATACAAGGTTGCAGTTGATAACAAGAAGAGACCATCTATCCTTGCCCTCTCTAGGCAAAAGCTGCCAAACCTTGCTGGAACTTCCATCGAGGGAGTCGAGAAGGGTGGCTACATTGTATCAGACAACTCTACAGGTAACAAGCCCGATGTTATTTTGATTGGTACTGGTTCTGAGTTGGAAATTGCCTACAAAGCTGGTGAGGAACTCAGAAAGGAAGGAAAGGCTGTCAGAGTGGTCTCCTTCGTTTCTTGGGAACTCTTTGACGAACAATCAGATGCCTACAAGGAAAGTGTTTTGCCCGCGGCAGTAACTGCCAGGGTTAGCATTGAGGCTGGATCCACATTTGGGTGGGAGAAGATTATTGGAAGCAAAGGAAAGGCAATCGGAATCGACCGTTTTGGAGCAAGTGCACCAGCCCCAATAATATACAAGGAGTATGGCCTTACTGTCGAGGCCGTTGTTGCAGCAGCAAAAGAAGTTAGCTAG

Protein Analysis

749

Amino Acids

80.6

Weight (kDa)

6.06

Isoelectric Point (pI)

34.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transketolase_N PF00456 91 - 422 1.1e-152 Transketolase, thiamine diphosphate binding domain
Transket_pyr PF02779 440 - 610 1.6e-53 Transketolase, pyrimidine binding domain
Transketolase_C_1 PF22613 623 - 737 2.7e-40 Transketolase-like TK C-terminal domain
Transketolase_C PF02780 635 - 741 3.5e-10 Transketolase, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000028)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g45420 FvH4_4g14031 FvH4_5g20780 FvH4_6g28530 FvH4_7g14020 FvH4_7g14030 FvH4_7g14040 FvH4_7g14050 FvH4_7g14060 FvH4_7g14070 FvH4_7g14090 FvH4_7g14110 FvH4_7g14140 FvH4_7g14450
malus_domestica MD00G1189100.v1.1 MD01G1018600.v1.1 MD01G1053800.v1.1 MD01G1053900.v1.1 MD01G1054000.v1.1 MD01G1054100.v1.1 MD01G1056700.v1.1 MD01G1057000.v1.1 MD01G1057300.v1.1 MD01G1057400.v1.1 MD01G1061600.v1.1 MD01G1061800.v1.1 MD01G1061900.v1.1 MD01G1062000.v1.1 MD01G1062400.v1.1 MD01G1062500.v1.1 MD01G1063200.v1.1 MD01G1063300.v1.1 MD01G1063400.v1.1 MD01G1063700.v1.1 MD01G1063900.v1.1 MD01G1064200.v1.1 MD01G1064300.v1.1 MD01G1064400.v1.1 MD01G1064600.v1.1 MD01G1064700.v1.1 MD01G1181100.v1.1 MD01G1212300.v1.1 MD01G1212500.v1.1 MD01G1212600.v1.1 MD02G1271900.v1.1 MD07G1136500.v1.1 MD07G1139300.v1.1 MD07G1141200.v1.1 MD07G1144700.v1.1 MD08G1144200.v1.1 MD14G1186300.v1.1 MD14G1186500.v1.1 MD14G1186700.v1.1 MD14G1186800.v1.1 MD15G1351300.v1.1 MD15G1439500.v1.1
prunus_persica Prupe.1G067000_v2.0.a1 Prupe.2G077400_v2.0.a1 Prupe.2G077700_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078600_v2.0.a1 Prupe.2G078800_v2.0.a1 Prupe.2G099600_v2.0.a1 Prupe.2G099700_v2.0.a1 Prupe.2G155100_v2.0.a1 Prupe.2G155500_v2.0.a1 Prupe.2G155600_v2.0.a1 Prupe.2G155800_v2.0.a1 Prupe.2G155900_v2.0.a1 Prupe.2G156100_v2.0.a1 Prupe.2G166100_v2.0.a1 Prupe.2G166300_v2.0.a1 Prupe.2G167500_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G168400_v2.0.a1 Prupe.2G168700_v2.0.a1 Prupe.2G168800_v2.0.a1 Prupe.2G169000_v2.0.a1 Prupe.2G169100_v2.0.a1 Prupe.2G169200_v2.0.a1 Prupe.2G169500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G172300_v2.0.a1 Prupe.2G304800_v2.0.a1 Prupe.4G264800_v2.0.a1 Prupe.4G265000_v2.0.a1 Prupe.5G051900_v2.0.a1 Prupe.5G052000_v2.0.a1
pyrus_communis pycom01g08380 pycom01g08430 pycom01g08490 pycom01g08520 pycom01g08540 pycom01g08550 pycom01g08600 pycom01g08630 pycom01g08660 pycom01g08720 pycom01g09180 pycom01g09200 pycom01g09210 pycom01g09270 pycom01g09280 pycom01g09300 pycom01g09380 pycom01g19110 pycom01g22260 pycom01g22310 pycom01g22330 pycom01g22350 pycom01g22360 pycom02g23250 pycom07g13420 pycom07g13670 pycom07g13900 pycom07g13910 pycom07g13960 pycom07g13970 pycom07g25680 pycom11g22830
rosa_chinensis RchiOBHm_Chr0c22g0500431 RchiOBHm_Chr0c22g0500441 RchiOBHm_Chr0c22g0500561 RchiOBHm_Chr0c22g0500571 RchiOBHm_Chr0c22g0500611 RchiOBHm_Chr0c22g0500621 RchiOBHm_Chr0c22g0500631 RchiOBHm_Chr0c22g0500681 RchiOBHm_Chr1g0348221 RchiOBHm_Chr1g0348251 RchiOBHm_Chr1g0352861 RchiOBHm_Chr1g0352871 RchiOBHm_Chr1g0352891 RchiOBHm_Chr1g0352901 RchiOBHm_Chr1g0354671 RchiOBHm_Chr1g0354701 RchiOBHm_Chr1g0354711 RchiOBHm_Chr1g0354751 RchiOBHm_Chr1g0354761 RchiOBHm_Chr1g0354841 RchiOBHm_Chr1g0354851 RchiOBHm_Chr1g0354881 RchiOBHm_Chr1g0354971 RchiOBHm_Chr1g0354981 RchiOBHm_Chr1g0354991 RchiOBHm_Chr1g0355001 RchiOBHm_Chr1g0355011 RchiOBHm_Chr1g0355021 RchiOBHm_Chr1g0355861 RchiOBHm_Chr1g0379671 RchiOBHm_Chr1g0379681 RchiOBHm_Chr2g0096591 RchiOBHm_Chr2g0132821 RchiOBHm_Chr3g0454901 RchiOBHm_Chr3g0472711 RchiOBHm_Chr4g0400791 RchiOBHm_Chr5g0069481 RchiOBHm_Chr5g0069511 RchiOBHm_Chr5g0069551 RchiOBHm_Chr6g0254651 RchiOBHm_Chr6g0259721 RchiOBHm_Chr7g0205911 RchiOBHm_Chr7g0206401 RchiOBHm_Chr7g0206571 RchiOBHm_Chr7g0206581 RchiOBHm_Chr7g0206621 RchiOBHm_Chr7g0206631 RchiOBHm_Chr7g0206641 RchiOBHm_Chr7g0206681 RchiOBHm_Chr7g0206691 RchiOBHm_Chr7g0206751 RchiOBHm_Chr7g0206761 RchiOBHm_Chr7g0206851 RchiOBHm_Chr7g0206911 RchiOBHm_Chr7g0206921 RchiOBHm_Chr7g0207001 RchiOBHm_Chr7g0207011 RchiOBHm_Chr7g0207031 RchiOBHm_Chr7g0207101 RchiOBHm_Chr7g0207161 RchiOBHm_Chr7g0207201 RchiOBHm_Chr7g0207271 RchiOBHm_Chr7g0207301 RchiOBHm_Chr7g0207311 RchiOBHm_Chr7g0207421 RchiOBHm_Chr7g0207481 RchiOBHm_Chr7g0207491 RchiOBHm_Chr7g0207501 RchiOBHm_Chr7g0207521 RchiOBHm_Chr7g0207531 RchiOBHm_Chr7g0207561 RchiOBHm_Chr7g0207571 RchiOBHm_Chr7g0207581 RchiOBHm_Chr7g0207601 RchiOBHm_Chr7g0207621 RchiOBHm_Chr7g0207631 RchiOBHm_Chr7g0207651 RchiOBHm_Chr7g0207661 RchiOBHm_Chr7g0207711 RchiOBHm_Chr7g0207761 RchiOBHm_Chr7g0207801 RchiOBHm_Chr7g0208821 RchiOBHm_Chr7g0208831 RchiOBHm_Chr7g0208841 RchiOBHm_Chr7g0213601 RchiOBHm_Chr7g0215981 RchiOBHm_Chr7g0216021
rosa_laevigata RLG00000003193 RLG00000003194 RLG00000003287 RLG00000003288 RLG00000003289 RLG00000003293 RLG00000003294 RLG00000003295 RLG00000003297 RLG00000003299 RLG00000003301 RLG00000003327 RLG00000003347 RLG00000016653 RLG00000018642 RLG00000018643 RLG00000019285 RLG00000022542 RLG00000026368 RLG00000026371 RLG00000028124 RLG00000028125 RLG00000028183 RLG00000028184 RLG00000028185 RLG00000028188 RLG00000028673 RLG00000029267 RLG00000029325 RLG00000029674 RLG00000032883 RLG00000036055 RLG00000036058 RLG00000036065 RLG00000036068 RLG00000036071 RLG00000036072 RLG00000036075 RLG00000036076
rosa_multiflora Rmu_co8250183.1_g000001 Rmu_co8271981.1_g000001 Rmu_co8410829.1_g000001 Rmu_co8432879.1_g000001 Rmu_co8441941.1_g000001 Rmu_sc0000076.1_g000031 Rmu_sc0000738.1_g000038 Rmu_sc0000848.1_g000003 Rmu_sc0000848.1_g000014 Rmu_sc0000848.1_g000015 Rmu_sc0000848.1_g000016 Rmu_sc0001264.1_g000001 Rmu_sc0002284.1_g000018 Rmu_sc0002356.1_g000011 Rmu_sc0003020.1_g000003 Rmu_sc0003115.1_g000001 Rmu_sc0003115.1_g000002 Rmu_sc0003115.1_g000003 Rmu_sc0003115.1_g000004 Rmu_sc0003115.1_g000005 Rmu_sc0003115.1_g000008 Rmu_sc0003115.1_g000010 Rmu_sc0003115.1_g000011 Rmu_sc0003115.1_g000014 Rmu_sc0003565.1_g000002 Rmu_sc0003652.1_g000013 Rmu_sc0003652.1_g000015 Rmu_sc0003652.1_g000016 Rmu_sc0003652.1_g000019 Rmu_sc0003940.1_g000001 Rmu_sc0003940.1_g000004 Rmu_sc0003940.1_g000009 Rmu_sc0004084.1_g000010 Rmu_sc0004705.1_g000021 Rmu_sc0004972.1_g000007 Rmu_sc0004987.1_g000002 Rmu_sc0004987.1_g000006 Rmu_sc0005065.1_g000018 Rmu_sc0005065.1_g000029 Rmu_sc0005391.1_g000002 Rmu_sc0005633.1_g000003 Rmu_sc0005633.1_g000008 Rmu_sc0006632.1_g000014 Rmu_sc0006632.1_g000018 Rmu_sc0006681.1_g000010 Rmu_sc0006681.1_g000011 Rmu_sc0006733.1_g000003 Rmu_sc0007385.1_g000005 Rmu_sc0007385.1_g000007 Rmu_sc0007385.1_g000009 Rmu_sc0007385.1_g000016 Rmu_sc0007645.1_g000002 Rmu_sc0007645.1_g000003 Rmu_sc0007645.1_g000022 Rmu_sc0007828.1_g000008 Rmu_sc0008509.1_g000003 Rmu_sc0008509.1_g000015 Rmu_sc0008509.1_g000016 Rmu_sc0008509.1_g000020 Rmu_sc0008509.1_g000030 Rmu_sc0008509.1_g000041 Rmu_sc0008756.1_g000001 Rmu_sc0008756.1_g000003 Rmu_sc0013028.1_g000002 Rmu_sc0013028.1_g000003 Rmu_sc0013028.1_g000005 Rmu_sc0013160.1_g000001 Rmu_sc0014454.1_g000009 Rmu_sc0014455.1_g000007 Rmu_sc0014659.1_g000004 Rmu_sc0017798.1_g000002 Rmu_sc0017798.1_g000004 Rmu_sc0029608.1_g000001 Rmu_sc0037861.1_g000001 Rmu_sc0038750.1_g000001 Rmu_sc0042995.1_g000001 Rmu_ssc0000161.1_g000017
rosa_roxburghii Rroxscaffold_1G00009180 Rroxscaffold_1G00009190 Rroxscaffold_1G00011450 Rroxscaffold_1G00011480 Rroxscaffold_2G00111660 Rroxscaffold_2G00113570 Rroxscaffold_2G00122140 Rroxscaffold_3G00243730 Rroxscaffold_3G00245750 Rroxscaffold_3G00245760 Rroxscaffold_3G00250220 Rroxscaffold_3G00251160 Rroxscaffold_3G00251270 Rroxscaffold_3G00251280 Rroxscaffold_3G00251300 Rroxscaffold_3G00251340 Rroxscaffold_3G00251350 Rroxscaffold_3G00251390 Rroxscaffold_3G00251400 Rroxscaffold_3G00251560 Rroxscaffold_3G00251570 Rroxscaffold_3G00251870 Rroxscaffold_3G00252200 Rroxscaffold_3G00252210 Rroxscaffold_4G00279970 Rroxscaffold_4G00299970 Rroxscaffold_4G00300760 Rroxscaffold_4G00300780 Rroxscaffold_4G00300810 Rroxscaffold_4G00300850 Rroxscaffold_4G00307080 Rroxscaffold_4G00307100 Rroxscaffold_4G00313990 Rroxscaffold_6G00405080
rosa_rugosa Rorug01G0193600 Rorug01G0193700 Rorug01G0243800 Rorug01G0244000 Rorug01G0244000 Rorug01G0244400 Rorug01G0414300.1 Rorug01G0414500 Rorug01G0414600 Rorug02G0235600 Rorug02G0307900 Rorug02G0583100 Rorug02G0583200 Rorug02G0583300 Rorug05G0398000 Rorug05G0398100 Rorug05G0398200 Rorug05G0580300 Rorug05G0590300 Rorug06G0116000 Rorug06G0116100 Rorug07G0096800 Rorug07G0097100.1 Rorug07G0097200 Rorug07G0098600 Rorug07G0098600 Rorug07G0098700 Rorug07G0099100 Rorug07G0106100 Rorug07G0106200 Rorug07G0106200 Rorug07G0106300 Rorug07G0157600 Rorug07G0157700 Rorug07G0157700 Rorug07G0157800
rosa_samantha Rh1AG255500 Rh1AG256700 Rh1BG225800 Rh1BG226200 Rh1BG230000 Rh1CG195300 Rh1CG238400 Rh1CG238500 Rh1CG238900 Rh1CG239000 Rh1CG239300 Rh1CG239400 Rh1CG239800 Rh1CG240000 Rh1CG240200 Rh1CG240300 Rh1CG244300 Rh1CG406900 Rh1CG407300 Rh1CG407400 Rh2CG343600 Rh2DG383200 Rh3BG205900 Rh4AG404400 Rh4BG415500 Rh5AG455200 Rh5AG455600 Rh5CG497000 Rh5CG497200 Rh7AG228800 Rh7AG230400 Rh7AG230800 Rh7AG231200 Rh7AG231600 Rh7AG231800 Rh7AG232100 Rh7AG241600 Rh7BG236200 Rh7CG238200 Rh7CG239100 Rh7CG243400 Rh7CG244900
rosa_wichuraiana Rw0G023040 Rw1G017780 Rw1G022320 Rw1G022340 Rw1G022410 Rw1G022420 Rw1G022440 Rw1G022460 Rw1G022490 Rw1G022500 Rw1G022530 Rw1G022550 Rw1G022560 Rw1G022600 Rw1G023060 Rw1G038150 Rw1G038160 Rw2G008210 Rw2G022350 Rw2G029290 Rw4G015050 Rw4G019850 Rw5G024060 Rw5G042460 Rw7G019160 Rw7G019460 Rw7G019690 Rw7G019830 Rw7G019860 Rw7G019880 Rw7G019890 Rw7G019930 Rw7G019990 Rw7G020460 Rw7G025100 Rw7G025120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1759
Acc65I GGTACC 1 cut(s) 1448
AccB1I GGYRCC 2 cut(s) 189, 1448
AccB7I CCANNNNNTGG 1 cut(s) 1742
AccII CGCG 3 cut(s) 87, 152, 2066
AciI CCGC 7 cut(s) 85, 102, 150, 204, 488, 2064, 2066
AclWI GGATC 5 cut(s) 280, 1018, 1604, 2094, 2107
AcoI YGGCCR 1 cut(s) 1097
AcsI RAATTY 1 cut(s) 1327
AcuI CTGAAG 2 cut(s) 511, 1259
AcvI CACGTG 1 cut(s) 1117
AcyI GRCGYC 1 cut(s) 190
AdeI CACNNNGTG 2 cut(s) 581, 1058
AfaI GTAC 4 cut(s) 470, 1217, 1450, 1927
AfiI CCNNNNNNNGG 8 cut(s) 46, 192, 295, 768, 874, 1742, 1815, 2109
AgeI ACCGGT 1 cut(s) 596
AgsI TTSAA 5 cut(s) 421, 520, 587, 1647, 1688
Alw21I GWGCWC 2 cut(s) 358, 2176
Alw26I GTCTC 9 cut(s) 94, 227, 248, 566, 825, 884, 1745, 1786, 2005
Alw44I GTGCAC 1 cut(s) 2172
AlwI GGATC 5 cut(s) 280, 1018, 1604, 2094, 2107
AlwNI CAGNNNCTG 1 cut(s) 2075
Ama87I CYCGRG 4 cut(s) 45, 325, 881, 1617
AoxI GGCC 9 cut(s) 33, 42, 48, 127, 209, 636, 1097, 2203, 2217
ApaLI GTGCAC 1 cut(s) 2172
ApoI RAATTY 1 cut(s) 1327
AsiGI ACCGGT 1 cut(s) 596
Asp700I GAANNNNTTC 1 cut(s) 524
Asp718I GGTACC 1 cut(s) 1448
AspLEI GCGC 1 cut(s) 192
AspS9I GGNCC 7 cut(s) 34, 43, 48, 214, 599, 637, 1667
AsuC2I CCSGG 7 cut(s) 46, 47, 218, 336, 919, 1706, 1759
AsuHPI GGTGA 9 cut(s) 323, 473, 583, 731, 841, 913, 1000, 1268, 1973
AvaI CYCGRG 4 cut(s) 45, 325, 881, 1617
AvaII GGWCC 3 cut(s) 214, 599, 1667
BaeGI GKGCMC 1 cut(s) 2176
BalI TGGCCA 1 cut(s) 1099
BamHI GGATCC 1 cut(s) 2099
BanI GGYRCC 2 cut(s) 189, 1448
BarI GAAGNNNNNNTAC 2 cut(s) 1856, 1888
BbrPI CACGTG 1 cut(s) 1117
Bbv12I GWGCWC 2 cut(s) 358, 2176
BceAI ACGGC 3 cut(s) 79, 212, 2204
BcgI CGANNNNNNTGC 2 cut(s) 1498, 1532
BcnI CCSGG 7 cut(s) 46, 47, 218, 336, 919, 1706, 1759
BcoDI GTCTC 9 cut(s) 94, 227, 248, 566, 825, 884, 1745, 1786, 2005
BfaI CTAG 2 cut(s) 1815, 2248
BfmI CTRYAG 3 cut(s) 1155, 1230, 1893
BfoI RGCGCY 1 cut(s) 193
BglI GCCNNNNNGGC 1 cut(s) 41
Bme18I GGWCC 3 cut(s) 214, 599, 1667
BmeT110I CYCGRG 4 cut(s) 45, 325, 881, 1617
BmgT120I GGNCC 7 cut(s) 34, 43, 48, 214, 599, 637, 1667
BmiI GGNNCC 6 cut(s) 67, 191, 202, 1450, 1501, 2101
BmrI ACTGGG 1 cut(s) 1064
BmsI GCATC 6 cut(s) 170, 295, 1063, 1306, 1716, 2029
BmuI ACTGGG 1 cut(s) 1064
BpmI CTGGAG 2 cut(s) 1162, 1284
Bpu10I CCTNAGC 1 cut(s) 1062
BpuMI CCSGG 7 cut(s) 46, 47, 218, 336, 919, 1706, 1759
BsaAI YACGTR 1 cut(s) 1117
BsaHI GRCGYC 1 cut(s) 190
BsaI GGTCTC 4 cut(s) 248, 884, 1786, 2005
BsaWI WCCGGW 2 cut(s) 288, 596
BsaXI ACNNNNNCTCC 8 cut(s) 50, 62, 74, 80, 92, 104, 1282, 1312
Bsc4I CCNNNNNNNGG 8 cut(s) 46, 192, 295, 768, 874, 1742, 1815, 2109
Bse118I RCCGGY 4 cut(s) 192, 211, 596, 1264
Bse1I ACTGG 5 cut(s) 419, 1059, 1145, 1258, 1933
Bse3DI GCAATG 3 cut(s) 539, 1516, 1716
BseGI GGATG 4 cut(s) 164, 1100, 1132, 1500
BseLI CCNNNNNNNGG 8 cut(s) 46, 192, 295, 768, 874, 1742, 1815, 2109
BseMI GCAATG 3 cut(s) 539, 1516, 1716
BseMII CTCAG 6 cut(s) 552, 636, 828, 1349, 1926, 1984
BseNI ACTGG 5 cut(s) 419, 1059, 1145, 1258, 1933
BseRI GAGGAG 1 cut(s) 88
BseSI GKGCMC 1 cut(s) 2176
BseYI CCCAGC 2 cut(s) 767, 1309
BsgI GTGCAG 3 cut(s) 645, 1035, 1410
Bsh1236I CGCG 3 cut(s) 87, 152, 2066
Bsh1285I CGRYCG 2 cut(s) 85, 2158
BshFI GGCC 9 cut(s) 35, 44, 50, 129, 211, 638, 1099, 2205, 2219
BshNI GGYRCC 2 cut(s) 189, 1448
BshTI ACCGGT 1 cut(s) 596
BsiEI CGRYCG 2 cut(s) 85, 2158
BsiHKAI GWGCWC 2 cut(s) 358, 2176
BsiHKCI CYCGRG 4 cut(s) 45, 325, 881, 1617
BslFI GGGAC 4 cut(s) 160, 167, 792, 1292
BslI CCNNNNNNNGG 8 cut(s) 46, 192, 295, 768, 874, 1742, 1815, 2109
BsmAI GTCTC 9 cut(s) 94, 227, 248, 566, 825, 884, 1745, 1786, 2005
BsmBI CGTCTC 1 cut(s) 94
BsmFI GGGAC 4 cut(s) 160, 167, 792, 1292
BsmI GAATGC 2 cut(s) 845, 1192
BsnI GGCC 9 cut(s) 35, 44, 50, 129, 211, 638, 1099, 2205, 2219
Bso31I GGTCTC 4 cut(s) 248, 884, 1786, 2005
BsoBI CYCGRG 4 cut(s) 45, 325, 881, 1617
Bsp1286I GDGCHC 2 cut(s) 358, 2176
Bsp143I GATC 5 cut(s) 285, 384, 1010, 1596, 2099
Bsp19I CCATGG 2 cut(s) 345, 1042
BspACI CCGC 7 cut(s) 85, 102, 150, 204, 488, 2064, 2066
BspANI GGCC 9 cut(s) 35, 44, 50, 129, 211, 638, 1099, 2205, 2219
BspCNI CTCAG 6 cut(s) 553, 637, 829, 1348, 1927, 1983
BspFNI CGCG 3 cut(s) 87, 152, 2066
BspHI TCATGA 1 cut(s) 387
BspLI GGNNCC 6 cut(s) 67, 191, 202, 1450, 1501, 2101
BspMAI CTGCAG 2 cut(s) 1159, 1234
BspPI GGATC 5 cut(s) 280, 1018, 1604, 2094, 2107
BspQI GCTCTTC 1 cut(s) 1527
BspT107I GGYRCC 2 cut(s) 189, 1448
BspTNI GGTCTC 4 cut(s) 248, 884, 1786, 2005
BsrDI GCAATG 3 cut(s) 539, 1516, 1716
BsrFI RCCGGY 4 cut(s) 192, 211, 596, 1264
BsrI ACTGG 5 cut(s) 419, 1059, 1145, 1258, 1933
BssAI RCCGGY 4 cut(s) 192, 211, 596, 1264
BssMI GATC 5 cut(s) 285, 384, 1010, 1596, 2099
BssNI GRCGYC 1 cut(s) 190
BssT1I CCWWGG 4 cut(s) 168, 345, 1042, 1090
Bst4CI ACNGT 6 cut(s) 425, 500, 683, 1037, 2159, 2212
Bst6I CTCTTC 4 cut(s) 16, 504, 1527, 1784
BstACI GRCGYC 1 cut(s) 190
BstAPI GCANNNNNTGC 4 cut(s) 1058, 1397, 1825, 2075
BstBAI YACGTR 1 cut(s) 1117
BstC8I GCNNGC 2 cut(s) 1266, 2064
BstDEI CTNAG 7 cut(s) 561, 645, 837, 1062, 1335, 1935, 1970
BstDSI CCRYGG 5 cut(s) 61, 228, 345, 1042, 2064
BstEII GGTNACC 1 cut(s) 329
BstF5I GGATG 4 cut(s) 164, 1100, 1132, 1500
BstFNI CGCG 3 cut(s) 87, 152, 2066
BstH2I RGCGCY 1 cut(s) 193
BstHHI GCGC 1 cut(s) 192
BstKTI GATC 5 cut(s) 288, 387, 1013, 1599, 2102
BstMAI GTCTC 9 cut(s) 94, 227, 248, 566, 825, 884, 1745, 1786, 2005
BstMBI GATC 5 cut(s) 285, 384, 1010, 1596, 2099
BstMCI CGRYCG 2 cut(s) 85, 2158
BstPI GGTNACC 1 cut(s) 329
BstSFI CTRYAG 3 cut(s) 1155, 1230, 1893
BstSLI GKGCMC 1 cut(s) 2176
BstUI CGCG 3 cut(s) 87, 152, 2066
BstX2I RGATCY 3 cut(s) 1010, 1596, 2099
BstYI RGATCY 3 cut(s) 1010, 1596, 2099
BsuRI GGCC 9 cut(s) 35, 44, 50, 129, 211, 638, 1099, 2205, 2219
BtgI CCRYGG 5 cut(s) 61, 228, 345, 1042, 2064
BtsCI GGATG 4 cut(s) 164, 1100, 1132, 1500
BtsI GCAGTG 1 cut(s) 1393
BtsIMutI CAGTG 9 cut(s) 505, 688, 834, 1042, 1052, 1138, 1251, 1393, 1569
Cac8I GCNNGC 2 cut(s) 1266, 2064
CaiI CAGNNNCTG 1 cut(s) 2075
CciI TCATGA 1 cut(s) 387
CfoI GCGC 1 cut(s) 192
Cfr10I RCCGGY 4 cut(s) 192, 211, 596, 1264
Cfr13I GGNCC 7 cut(s) 34, 43, 48, 214, 599, 637, 1667
Cfr42I CCGCGG 1 cut(s) 2067
Cfr9I CCCGGG 1 cut(s) 45
CpoI CGGWCCG 1 cut(s) 214
CseI GACGC 1 cut(s) 76
CsiI ACCWGGT 1 cut(s) 577
Csp6I GTAC 4 cut(s) 469, 1216, 1449, 1926
CspAI ACCGGT 1 cut(s) 596
CspCI CAANNNNNGTGG 2 cut(s) 1543, 1578
CspI CGGWCCG 1 cut(s) 214
CviAII CATG 6 cut(s) 346, 388, 1043, 1411, 1490, 1579
CviQI GTAC 4 cut(s) 469, 1216, 1449, 1926
DdeI CTNAG 7 cut(s) 561, 645, 837, 1062, 1335, 1935, 1970
DinI GGCGCC 1 cut(s) 191
DpnI GATC 5 cut(s) 287, 386, 1012, 1598, 2101
DpnII GATC 5 cut(s) 285, 384, 1010, 1596, 2099
DraIII CACNNNGTG 2 cut(s) 581, 1058
DrdI GACNNNNNNGTC 1 cut(s) 1759
DseDI GACNNNNNNGTC 1 cut(s) 1759
EaeI YGGCCR 1 cut(s) 1097
Eam1104I CTCTTC 4 cut(s) 16, 504, 1527, 1784
EarI CTCTTC 4 cut(s) 16, 504, 1527, 1784
EciI GGCGGA 1 cut(s) 91
Eco130I CCWWGG 4 cut(s) 168, 345, 1042, 1090
Eco31I GGTCTC 4 cut(s) 248, 884, 1786, 2005
Eco47I GGWCC 3 cut(s) 214, 599, 1667
Eco57I CTGAAG 2 cut(s) 511, 1259
Eco72I CACGTG 1 cut(s) 1117
Eco88I CYCGRG 4 cut(s) 45, 325, 881, 1617
Eco91I GGTNACC 1 cut(s) 329
EcoO109I RGGNCCY 1 cut(s) 34
EcoO65I GGTNACC 1 cut(s) 329
EcoT14I CCWWGG 4 cut(s) 168, 345, 1042, 1090
EgeI GGCGCC 1 cut(s) 191
EheI GGCGCC 1 cut(s) 191
ErhI CCWWGG 4 cut(s) 168, 345, 1042, 1090
Esp3I CGTCTC 1 cut(s) 94
FaeI CATG 6 cut(s) 349, 391, 1046, 1414, 1493, 1582
FaqI GGGAC 4 cut(s) 160, 167, 792, 1292
FatI CATG 6 cut(s) 345, 387, 1042, 1410, 1489, 1578
FauI CCCGC 2 cut(s) 481, 2071
FauNDI CATATG 1 cut(s) 1102
FokI GGATG 4 cut(s) 151, 1107, 1139, 1507
FspBI CTAG 2 cut(s) 1815, 2248
GlaI GCGC 1 cut(s) 191
GsaI CCCAGC 2 cut(s) 771, 1313
GsuI CTGGAG 2 cut(s) 1162, 1284
HaeII RGCGCY 1 cut(s) 193
HaeIII GGCC 9 cut(s) 35, 44, 50, 129, 211, 638, 1099, 2205, 2219
HgaI GACGC 1 cut(s) 76
HhaI GCGC 1 cut(s) 192
Hin1I GRCGYC 1 cut(s) 190
Hin1II CATG 6 cut(s) 349, 391, 1046, 1414, 1493, 1582
Hin6I GCGC 1 cut(s) 190
HinP1I GCGC 1 cut(s) 190
HincII GTYRAC 1 cut(s) 694
HindII GTYRAC 1 cut(s) 694
HinfI GANTC 7 cut(s) 235, 406, 1144, 1515, 1643, 1857, 2151
HphI GGTGA 9 cut(s) 323, 473, 583, 731, 841, 913, 1000, 1268, 1973
Hpy166II GTNNAC 3 cut(s) 280, 694, 2174
Hpy188III TCNNGA 8 cut(s) 239, 313, 388, 1172, 1288, 1301, 1441, 1861
Hpy8I GTNNAC 3 cut(s) 280, 694, 2174
Hpy99I CGWCG 1 cut(s) 809
HpyAV CCTTC 9 cut(s) 130, 310, 514, 808, 1154, 1438, 1858, 1973, 2014
HpyCH4III ACNGT 6 cut(s) 425, 500, 683, 1037, 2159, 2212
HpyCH4IV ACGT 3 cut(s) 664, 891, 1116
HpyF3I CTNAG 7 cut(s) 561, 645, 837, 1062, 1335, 1935, 1970
HpySE526I ACGT 3 cut(s) 664, 891, 1116
Hsp92I GRCGYC 1 cut(s) 190
Hsp92II CATG 6 cut(s) 349, 391, 1046, 1414, 1493, 1582
HspAI GCGC 1 cut(s) 190
KasI GGCGCC 1 cut(s) 189
KpnI GGTACC 1 cut(s) 1452
KroI GCCGGC 1 cut(s) 1264
KroNI GCCGGC 1 cut(s) 1266
KspI CCGCGG 1 cut(s) 2067
Kzo9I GATC 5 cut(s) 285, 384, 1010, 1596, 2099
LguI GCTCTTC 1 cut(s) 1527
LmnI GCTCC 7 cut(s) 71, 200, 361, 1486, 1499, 1734, 2165
LweI GCATC 6 cut(s) 170, 295, 1063, 1306, 1716, 2029
MabI ACCWGGT 1 cut(s) 577
MaeI CTAG 2 cut(s) 1815, 2248
MaeII ACGT 3 cut(s) 664, 891, 1116
MalI GATC 5 cut(s) 287, 386, 1012, 1598, 2101
MboI GATC 5 cut(s) 285, 384, 1010, 1596, 2099
MfeI CAATTG 1 cut(s) 1647
MflI RGATCY 3 cut(s) 1010, 1596, 2099
MhlI GDGCHC 2 cut(s) 358, 2176
MlsI TGGCCA 1 cut(s) 1099
MluCI AATT 3 cut(s) 1327, 1647, 1944
MluNI TGGCCA 1 cut(s) 1099
Mly113I GGCGCC 1 cut(s) 190
MlyI GAGTC 3 cut(s) 229, 1153, 1866
MmeI TCCRAC 5 cut(s) 93, 105, 1431, 1756, 1920
Mox20I TGGCCA 1 cut(s) 1099
MroNI GCCGGC 1 cut(s) 1264
MroXI GAANNNNTTC 1 cut(s) 524
MscI TGGCCA 1 cut(s) 1099
MseI TTAA 2 cut(s) 945, 1131
MslI CAYNNNNRTG 2 cut(s) 1724, 2110
Msp20I TGGCCA 1 cut(s) 1099
MspA1I CMGCKG 3 cut(s) 1313, 1739, 2066
MunI CAATTG 1 cut(s) 1647
Mva1269I GAATGC 2 cut(s) 845, 1192
MvnI CGCG 3 cut(s) 87, 152, 2066
NaeI GCCGGC 1 cut(s) 1266
NarI GGCGCC 1 cut(s) 190
NciI CCSGG 7 cut(s) 46, 47, 218, 336, 919, 1706, 1759
NcoI CCATGG 2 cut(s) 345, 1042
NdeI CATATG 1 cut(s) 1102
NdeII GATC 5 cut(s) 285, 384, 1010, 1596, 2099
NgoMIV GCCGGC 1 cut(s) 1264
NlaIII CATG 6 cut(s) 349, 391, 1046, 1414, 1493, 1582
NlaIV GGNNCC 6 cut(s) 67, 191, 202, 1450, 1501, 2101
NmuCI GTSAC 6 cut(s) 19, 329, 589, 961, 988, 1136
PaeR7I CTCGAG 1 cut(s) 1617
PagI TCATGA 1 cut(s) 387
PciSI GCTCTTC 1 cut(s) 1527
PcsI WCGNNNNNNNCGW 2 cut(s) 888, 1857
PctI GAATGC 2 cut(s) 845, 1192
PdiI GCCGGC 1 cut(s) 1266
PdmI GAANNNNTTC 1 cut(s) 524
PfeI GAWTC 4 cut(s) 406, 1515, 1643, 2151
PflFI GACNNNGTC 2 cut(s) 86, 500
PflMI CCANNNNNTGG 1 cut(s) 1742
PinAI ACCGGT 1 cut(s) 596
PleI GAGTC 3 cut(s) 229, 1152, 1865
PluTI GGCGCC 1 cut(s) 193
PmaCI CACGTG 1 cut(s) 1117
PmlI CACGTG 1 cut(s) 1117
PpsI GAGTC 3 cut(s) 229, 1152, 1865
Ppu21I YACGTR 1 cut(s) 1117
PspCI CACGTG 1 cut(s) 1117
PspEI GGTNACC 1 cut(s) 329
PspFI CCCAGC 2 cut(s) 767, 1309
PspN4I GGNNCC 6 cut(s) 67, 191, 202, 1450, 1501, 2101
PspPI GGNCC 7 cut(s) 34, 43, 48, 214, 599, 637, 1667
PspXI VCTCGAGB 1 cut(s) 1617
PstI CTGCAG 2 cut(s) 1159, 1234
PstNI CAGNNNCTG 1 cut(s) 2075
PsuI RGATCY 3 cut(s) 1010, 1596, 2099
PsyI GACNNNGTC 2 cut(s) 86, 500
PvuII CAGCTG 2 cut(s) 1313, 1739
RsaI GTAC 4 cut(s) 470, 1217, 1450, 1927
RsaNI GTAC 4 cut(s) 469, 1216, 1449, 1926
RseI CAYNNNNRTG 2 cut(s) 1724, 2110
Rsr2I CGGWCCG 1 cut(s) 214
RsrII CGGWCCG 1 cut(s) 214
SacII CCGCGG 1 cut(s) 2067
SapI GCTCTTC 1 cut(s) 1527
SaqAI TTAA 2 cut(s) 945, 1131
Sau3AI GATC 5 cut(s) 285, 384, 1010, 1596, 2099
Sau96I GGNCC 7 cut(s) 34, 43, 48, 214, 599, 637, 1667
SchI GAGTC 3 cut(s) 229, 1153, 1866
SduI GDGCHC 2 cut(s) 358, 2176
SexAI ACCWGGT 1 cut(s) 577
SfaNI GCATC 6 cut(s) 170, 295, 1063, 1306, 1716, 2029
SfcI CTRYAG 3 cut(s) 1155, 1230, 1893
SfiI GGCCNNNNNGGCC 1 cut(s) 41
SfoI GGCGCC 1 cut(s) 191
Sfr274I CTCGAG 1 cut(s) 1617
Sfr303I CCGCGG 1 cut(s) 2067
SgrBI CCGCGG 1 cut(s) 2067
SinI GGWCC 3 cut(s) 214, 599, 1667
SlaI CTCGAG 1 cut(s) 1617
SmaI CCCGGG 1 cut(s) 47
SmiMI CAYNNNNRTG 2 cut(s) 1724, 2110
SmlI CTYRAG 1 cut(s) 1617
SmoI CTYRAG 1 cut(s) 1617
SrfI GCCCGGGC 1 cut(s) 47
Sse9I AATT 3 cut(s) 1327, 1647, 1944
SsiI CCGC 7 cut(s) 85, 102, 150, 204, 488, 2064, 2066
SspDI GGCGCC 1 cut(s) 189
SspI AATATT 1 cut(s) 1468
SspMI CTAG 2 cut(s) 1815, 2248
StyI CCWWGG 4 cut(s) 168, 345, 1042, 1090
TaaI ACNGT 6 cut(s) 425, 500, 683, 1037, 2159, 2212
TaiI ACGT 3 cut(s) 667, 894, 1119
TaqI TCGA 8 cut(s) 240, 312, 1173, 1618, 1851, 1860, 2154, 2214
TaqII GACCGA 1 cut(s) 1684
TasI AATT 3 cut(s) 1327, 1647, 1944
TauI GCSGC 2 cut(s) 206, 2069
TfiI GAWTC 4 cut(s) 406, 1515, 1643, 2151
Tru1I TTAA 2 cut(s) 945, 1131
Tru9I TTAA 2 cut(s) 945, 1131
TscAI CASTG 9 cut(s) 505, 688, 841, 1042, 1059, 1145, 1258, 1393, 1576
TseFI GTSAC 6 cut(s) 19, 329, 589, 961, 988, 1136
Tsp45I GTSAC 6 cut(s) 19, 329, 589, 961, 988, 1136
TspDTI ATGAA 2 cut(s) 765, 1436
TspGWI ACGGA 2 cut(s) 7, 1533
TspMI CCCGGG 1 cut(s) 45
TspRI CASTG 9 cut(s) 505, 688, 841, 1042, 1059, 1145, 1258, 1393, 1576
Tth111I GACNNNGTC 2 cut(s) 86, 500
Van91I CCANNNNNTGG 1 cut(s) 1742
VneI GTGCAC 1 cut(s) 2172
VpaK11BI GGWCC 3 cut(s) 214, 599, 1667
XapI RAATTY 1 cut(s) 1327
XcmI CCANNNNNNNNNTGG 3 cut(s) 193, 601, 1646
XhoI CTCGAG 1 cut(s) 1617
XmaI CCCGGG 1 cut(s) 45
XmnI GAANNNNTTC 1 cut(s) 524
XspI CTAG 2 cut(s) 1815, 2248
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.