RchiOBHm_Chr7g0216021

Leucine Rich repeat

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Reverse (-)
33684139 .. 33686988
2850 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ19328

Sequence Viewer

Length: 2850 bp
ATGGTCTCATATATAGCATTTTTTGGGGTCTTATGCATAGCATCTTTTTCTTCACTTTGCCCATCATCGCTCTGCATGATCATAATCATGAGTGTTAGGTCTATACGATATTCTGTTTTGGTTTGGCATCTATGCCTGGTTACTTGTTGTTCAAGTAGTGTAGGAAGCTCCAACATTATGTGCCAGGAAAGTGAAAGGCGTGCTCTGCTTCAGCTTAAGCAAGGCCTTGTGGACGAGTTTAATGTTCTTGCCTCTTGGGGAAGCAAGAAAGATTGTTGCGAGTGGAGAGGAATAGCATGCAACAACCAAACAGGTCATGTCATCACCCTAAATCTCTCTAATAATTCTTCTGATGATTACATTGATGCTGAAGCTTCTTTAAGAGGTGAAATTGATCCTTCACTACTTGAATTGCGATATCTAAATTACTTGGACCTCAGTTTTAATGATTTTGGAGGAATTATGATTCCCAAGTTCATTGGCTCTTTGACTCGATTGAAAGAACTCAAACTTGCAAGAGCTAATTTTAGTGGACCTGTTCCTTCCCAACTTGGAAACCTCTCTAATTTGCACACTCTCGATCTTGAAGGCAACTCTGATGTGAGCTTTGAAAGTCTCGAGTGGTTATCTCATCTTTCTTCCTTGAGATACCTTAACATTTCTGAAATAGATTTGTCTCGGAATAGAAATTGGCCACAATCTTTAAGCAAGCTGACTTCAGTGATAGAGCTTCAGTTATTTGAGTGTGATCTCAGTGTCAATCTAAGATCACTTTCCTCTATCAATTCTTCAGCCTCTTTCCAAGCCATTGACCTCTCTTTTAATTCTCTTAATTCTTCAATATTTTATTGGATAGCCAATGTTAGCAGCAGCAACCTTGTCCATATTGGATTGAGTGGTAATTACTTACAAGGTCCCATCCCAGATGTTTTCACAAACATGGCTTCTCTAAAATTTCTTGACCTGTCTGAAAACCAATTTGAAGGTGGAATACCAAAATTCTTTCAAAGCTTACGCAGCTTAGAGTCCTTGCATTTAGAGTGGAACCAATTCTCTCAAAACATTGAGGAGTCTGTAAAGATCTTGTCTTGTGCTGATAATACACTCATGGACTTGGACTTGAGCCAAAACCGATTTTGGGGTTCATTAGGGCTAGATTTTACAAGTTTTACAGAGCTAAAATTTTTATCCCTTTCCCAAAATCTGCTAAATGGTTCTCTACCAGAGAGTATAGGGCAACTTTCTAGCCTTGAAGCTTTGGACCTTTCTGGGAATTCGTTGAATGGTGTCATAACAGAAGCCCACTTTTTGAACCTCTCTCGTTTACAGGCCCTGGATGTTTCTGATAATCCGGCTTTGTCTATCAATCTGAGCTCAAATTGGAATCCACCATTTCAACTTAATGAGTTGTACATGTCCTCTTGCAAAGTGGGCCCAGCTTTCCCCAAATGGATTCAAACGCAGAGAAATCTTACTAATCTTTGTATCAACAATGCTGGAATATTGGACTCATTGCCTGAGAAATTCTTGGATCAATTTTCTGGCTTAGAGGACCTAGATCTTTCCCTGAACCAAATCCATGGCAAATTGCCGAATTTTTCCTCAAGCTTATTGACATATGTCAACTTGTCTTCTAATCTGTTTTCTGGTGCATTGCCATCATTCCCTCCAACAATCCAATATTTGATCCTCTCGGGAAACAAGCTTTCTGGACCCCTGAGTTCCTTGTGTGCAACACAGGCTCCAAATTTCTTCCTTCTCGACCTTTCTGTGAACCTATTGTCAGGGGAACTTCCTAAATGCTGGATGCAATTTCCGGCATTACAGTTACTGAATTTAGGAAAGAATAAATTTTCTGGGAAACTACCAAGCTCGTTAGGCAATTTACAATTATTGTGGATATTGCATTTACATGGTAACAACTTTTCTGGAGAACTGCCTTCTTTGGAGAACTGTACAAAACTAGGAGTTCTTGACCTTGGAGCAAATAAATTATCCGGAAAAATCCCACCATGGATAGGCCAAAGCCTAACACAGTTGTTTGTTCTACGCCTACGGTCTAATGAGTTCCACGGAATCATACCCTCATCCCTGTGCAGTTTAAGCTCCATTCATGTTTTGGACCTCTCTCAGAACAATTTATCAGGAGCCTTGCCGCATTGCTTCAGTAACATAACAGCTTCATCTGATGACACAAGTGTTTTTGGATTTGTAGAAATAGTGTGGAAAGGAGTAGAGATTGAGTTTGGGGGAAATCTTGCACATGTGAGAAGCATTGACATTTCAAGCAATCACTTGGTTGGGGATATTCCTGAAAATATAACAAGCATGCTAATGTTGAATTCTCTAAACCTCTCAGGAAACAATTTGACAGGGAAGGTTCCTGAAAAGTTTGGTAACCTGAACAGCTTAGAATCTCTTGATTTGTCAAGAAACCAGATATCTGGTAGAATTCCTTCAAGTTTTTCGAGCTTAAACTTTCTTAGTGTCTTGGACTTATCATACAACGACTTGTCTGGAAGAATTCCTCTAGGCACTCAACTTCAGTCTTTTAATGCTTCTGCCTATATGGGAAATAGTGGACTTTGCGGACCACCACTTACACAACAATGCCCTAGAGATGGAACAATTACTGGTACTGAAAATGATGATGATGGTATCATAAGCATGGGATTCTTTGTCAGTACAGTGCTTGGATTCGCCACTGGATTTTGGATAGTCTGTGGCAGTTTACTGCTTAAGAGCTCTTGGAGACACGCCTATTTCAGGTTCCTGGATGATACAAGAGATTTGGTTTATGTCAAAACTGCTGTGTACAAGGCAAAAATGCAGAGGAGACTTCACAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

949

Amino Acids

104.45

Weight (kDa)

5.3

Isoelectric Point (pI)

40.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 64 - 101 5e-11 Leucine rich repeat N-terminal domain
LRR_14 PF23598 135 - 344 1.3e-14 Leucine-rich repeat region
LRR_8 PF13855 291 - 351 1.4e-09 Leucine rich repeat
LRR_8 PF13855 368 - 427 5.9e-06 Leucine rich repeat
LRR_8 PF13855 755 - 814 1.7e-09 Leucine rich repeat
LRR_8 PF13855 780 - 838 3.5e-09 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000028)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g45420 FvH4_4g14031 FvH4_5g20780 FvH4_6g28530 FvH4_7g14020 FvH4_7g14030 FvH4_7g14040 FvH4_7g14050 FvH4_7g14060 FvH4_7g14070 FvH4_7g14090 FvH4_7g14110 FvH4_7g14140 FvH4_7g14450
malus_domestica MD00G1189100.v1.1 MD01G1018600.v1.1 MD01G1053800.v1.1 MD01G1053900.v1.1 MD01G1054000.v1.1 MD01G1054100.v1.1 MD01G1056700.v1.1 MD01G1057000.v1.1 MD01G1057300.v1.1 MD01G1057400.v1.1 MD01G1061600.v1.1 MD01G1061800.v1.1 MD01G1061900.v1.1 MD01G1062000.v1.1 MD01G1062400.v1.1 MD01G1062500.v1.1 MD01G1063200.v1.1 MD01G1063300.v1.1 MD01G1063400.v1.1 MD01G1063700.v1.1 MD01G1063900.v1.1 MD01G1064200.v1.1 MD01G1064300.v1.1 MD01G1064400.v1.1 MD01G1064600.v1.1 MD01G1064700.v1.1 MD01G1181100.v1.1 MD01G1212300.v1.1 MD01G1212500.v1.1 MD01G1212600.v1.1 MD02G1271900.v1.1 MD07G1136500.v1.1 MD07G1139300.v1.1 MD07G1141200.v1.1 MD07G1144700.v1.1 MD08G1144200.v1.1 MD14G1186300.v1.1 MD14G1186500.v1.1 MD14G1186700.v1.1 MD14G1186800.v1.1 MD15G1351300.v1.1 MD15G1439500.v1.1
prunus_persica Prupe.1G067000_v2.0.a1 Prupe.2G077400_v2.0.a1 Prupe.2G077700_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078600_v2.0.a1 Prupe.2G078800_v2.0.a1 Prupe.2G099600_v2.0.a1 Prupe.2G099700_v2.0.a1 Prupe.2G155100_v2.0.a1 Prupe.2G155500_v2.0.a1 Prupe.2G155600_v2.0.a1 Prupe.2G155800_v2.0.a1 Prupe.2G155900_v2.0.a1 Prupe.2G156100_v2.0.a1 Prupe.2G166100_v2.0.a1 Prupe.2G166300_v2.0.a1 Prupe.2G167500_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G168400_v2.0.a1 Prupe.2G168700_v2.0.a1 Prupe.2G168800_v2.0.a1 Prupe.2G169000_v2.0.a1 Prupe.2G169100_v2.0.a1 Prupe.2G169200_v2.0.a1 Prupe.2G169500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G172300_v2.0.a1 Prupe.2G304800_v2.0.a1 Prupe.4G264800_v2.0.a1 Prupe.4G265000_v2.0.a1 Prupe.5G051900_v2.0.a1 Prupe.5G052000_v2.0.a1
pyrus_communis pycom01g08380 pycom01g08430 pycom01g08490 pycom01g08520 pycom01g08540 pycom01g08550 pycom01g08600 pycom01g08630 pycom01g08660 pycom01g08720 pycom01g09180 pycom01g09200 pycom01g09210 pycom01g09270 pycom01g09280 pycom01g09300 pycom01g09380 pycom01g19110 pycom01g22260 pycom01g22310 pycom01g22330 pycom01g22350 pycom01g22360 pycom02g23250 pycom07g13420 pycom07g13670 pycom07g13900 pycom07g13910 pycom07g13960 pycom07g13970 pycom07g25680 pycom11g22830
rosa_chinensis RchiOBHm_Chr0c22g0500431 RchiOBHm_Chr0c22g0500441 RchiOBHm_Chr0c22g0500561 RchiOBHm_Chr0c22g0500571 RchiOBHm_Chr0c22g0500611 RchiOBHm_Chr0c22g0500621 RchiOBHm_Chr0c22g0500631 RchiOBHm_Chr0c22g0500681 RchiOBHm_Chr1g0348221 RchiOBHm_Chr1g0348251 RchiOBHm_Chr1g0352861 RchiOBHm_Chr1g0352871 RchiOBHm_Chr1g0352891 RchiOBHm_Chr1g0352901 RchiOBHm_Chr1g0354671 RchiOBHm_Chr1g0354701 RchiOBHm_Chr1g0354711 RchiOBHm_Chr1g0354751 RchiOBHm_Chr1g0354761 RchiOBHm_Chr1g0354841 RchiOBHm_Chr1g0354851 RchiOBHm_Chr1g0354881 RchiOBHm_Chr1g0354971 RchiOBHm_Chr1g0354981 RchiOBHm_Chr1g0354991 RchiOBHm_Chr1g0355001 RchiOBHm_Chr1g0355011 RchiOBHm_Chr1g0355021 RchiOBHm_Chr1g0355861 RchiOBHm_Chr1g0379671 RchiOBHm_Chr1g0379681 RchiOBHm_Chr2g0096591 RchiOBHm_Chr2g0132821 RchiOBHm_Chr3g0454901 RchiOBHm_Chr3g0472711 RchiOBHm_Chr4g0400791 RchiOBHm_Chr5g0069481 RchiOBHm_Chr5g0069511 RchiOBHm_Chr5g0069551 RchiOBHm_Chr6g0254651 RchiOBHm_Chr6g0259721 RchiOBHm_Chr7g0205911 RchiOBHm_Chr7g0206401 RchiOBHm_Chr7g0206571 RchiOBHm_Chr7g0206581 RchiOBHm_Chr7g0206621 RchiOBHm_Chr7g0206631 RchiOBHm_Chr7g0206641 RchiOBHm_Chr7g0206681 RchiOBHm_Chr7g0206691 RchiOBHm_Chr7g0206751 RchiOBHm_Chr7g0206761 RchiOBHm_Chr7g0206851 RchiOBHm_Chr7g0206911 RchiOBHm_Chr7g0206921 RchiOBHm_Chr7g0207001 RchiOBHm_Chr7g0207011 RchiOBHm_Chr7g0207031 RchiOBHm_Chr7g0207101 RchiOBHm_Chr7g0207161 RchiOBHm_Chr7g0207201 RchiOBHm_Chr7g0207271 RchiOBHm_Chr7g0207301 RchiOBHm_Chr7g0207311 RchiOBHm_Chr7g0207421 RchiOBHm_Chr7g0207481 RchiOBHm_Chr7g0207491 RchiOBHm_Chr7g0207501 RchiOBHm_Chr7g0207521 RchiOBHm_Chr7g0207531 RchiOBHm_Chr7g0207561 RchiOBHm_Chr7g0207571 RchiOBHm_Chr7g0207581 RchiOBHm_Chr7g0207601 RchiOBHm_Chr7g0207621 RchiOBHm_Chr7g0207631 RchiOBHm_Chr7g0207651 RchiOBHm_Chr7g0207661 RchiOBHm_Chr7g0207711 RchiOBHm_Chr7g0207761 RchiOBHm_Chr7g0207801 RchiOBHm_Chr7g0208821 RchiOBHm_Chr7g0208831 RchiOBHm_Chr7g0208841 RchiOBHm_Chr7g0213601 RchiOBHm_Chr7g0215981 RchiOBHm_Chr7g0216021
rosa_laevigata RLG00000003193 RLG00000003194 RLG00000003287 RLG00000003288 RLG00000003289 RLG00000003293 RLG00000003294 RLG00000003295 RLG00000003297 RLG00000003299 RLG00000003301 RLG00000003327 RLG00000003347 RLG00000016653 RLG00000018642 RLG00000018643 RLG00000019285 RLG00000022542 RLG00000026368 RLG00000026371 RLG00000028124 RLG00000028125 RLG00000028183 RLG00000028184 RLG00000028185 RLG00000028188 RLG00000028673 RLG00000029267 RLG00000029325 RLG00000029674 RLG00000032883 RLG00000036055 RLG00000036058 RLG00000036065 RLG00000036068 RLG00000036071 RLG00000036072 RLG00000036075 RLG00000036076
rosa_multiflora Rmu_co8250183.1_g000001 Rmu_co8271981.1_g000001 Rmu_co8410829.1_g000001 Rmu_co8432879.1_g000001 Rmu_co8441941.1_g000001 Rmu_sc0000076.1_g000031 Rmu_sc0000738.1_g000038 Rmu_sc0000848.1_g000003 Rmu_sc0000848.1_g000014 Rmu_sc0000848.1_g000015 Rmu_sc0000848.1_g000016 Rmu_sc0001264.1_g000001 Rmu_sc0002284.1_g000018 Rmu_sc0002356.1_g000011 Rmu_sc0003020.1_g000003 Rmu_sc0003115.1_g000001 Rmu_sc0003115.1_g000002 Rmu_sc0003115.1_g000003 Rmu_sc0003115.1_g000004 Rmu_sc0003115.1_g000005 Rmu_sc0003115.1_g000008 Rmu_sc0003115.1_g000010 Rmu_sc0003115.1_g000011 Rmu_sc0003115.1_g000014 Rmu_sc0003565.1_g000002 Rmu_sc0003652.1_g000013 Rmu_sc0003652.1_g000015 Rmu_sc0003652.1_g000016 Rmu_sc0003652.1_g000019 Rmu_sc0003940.1_g000001 Rmu_sc0003940.1_g000004 Rmu_sc0003940.1_g000009 Rmu_sc0004084.1_g000010 Rmu_sc0004705.1_g000021 Rmu_sc0004972.1_g000007 Rmu_sc0004987.1_g000002 Rmu_sc0004987.1_g000006 Rmu_sc0005065.1_g000018 Rmu_sc0005065.1_g000029 Rmu_sc0005391.1_g000002 Rmu_sc0005633.1_g000003 Rmu_sc0005633.1_g000008 Rmu_sc0006632.1_g000014 Rmu_sc0006632.1_g000018 Rmu_sc0006681.1_g000010 Rmu_sc0006681.1_g000011 Rmu_sc0006733.1_g000003 Rmu_sc0007385.1_g000005 Rmu_sc0007385.1_g000007 Rmu_sc0007385.1_g000009 Rmu_sc0007385.1_g000016 Rmu_sc0007645.1_g000002 Rmu_sc0007645.1_g000003 Rmu_sc0007645.1_g000022 Rmu_sc0007828.1_g000008 Rmu_sc0008509.1_g000003 Rmu_sc0008509.1_g000015 Rmu_sc0008509.1_g000016 Rmu_sc0008509.1_g000020 Rmu_sc0008509.1_g000030 Rmu_sc0008509.1_g000041 Rmu_sc0008756.1_g000001 Rmu_sc0008756.1_g000003 Rmu_sc0013028.1_g000002 Rmu_sc0013028.1_g000003 Rmu_sc0013028.1_g000005 Rmu_sc0013160.1_g000001 Rmu_sc0014454.1_g000009 Rmu_sc0014455.1_g000007 Rmu_sc0014659.1_g000004 Rmu_sc0017798.1_g000002 Rmu_sc0017798.1_g000004 Rmu_sc0029608.1_g000001 Rmu_sc0037861.1_g000001 Rmu_sc0038750.1_g000001 Rmu_sc0042995.1_g000001 Rmu_ssc0000161.1_g000017
rosa_roxburghii Rroxscaffold_1G00009180 Rroxscaffold_1G00009190 Rroxscaffold_1G00011450 Rroxscaffold_1G00011480 Rroxscaffold_2G00111660 Rroxscaffold_2G00113570 Rroxscaffold_2G00122140 Rroxscaffold_3G00243730 Rroxscaffold_3G00245750 Rroxscaffold_3G00245760 Rroxscaffold_3G00250220 Rroxscaffold_3G00251160 Rroxscaffold_3G00251270 Rroxscaffold_3G00251280 Rroxscaffold_3G00251300 Rroxscaffold_3G00251340 Rroxscaffold_3G00251350 Rroxscaffold_3G00251390 Rroxscaffold_3G00251400 Rroxscaffold_3G00251560 Rroxscaffold_3G00251570 Rroxscaffold_3G00251870 Rroxscaffold_3G00252200 Rroxscaffold_3G00252210 Rroxscaffold_4G00279970 Rroxscaffold_4G00299970 Rroxscaffold_4G00300760 Rroxscaffold_4G00300780 Rroxscaffold_4G00300810 Rroxscaffold_4G00300850 Rroxscaffold_4G00307080 Rroxscaffold_4G00307100 Rroxscaffold_4G00313990 Rroxscaffold_6G00405080
rosa_rugosa Rorug01G0193600 Rorug01G0193700 Rorug01G0243800 Rorug01G0244000 Rorug01G0244000 Rorug01G0244400 Rorug01G0414300.1 Rorug01G0414500 Rorug01G0414600 Rorug02G0235600 Rorug02G0307900 Rorug02G0583100 Rorug02G0583200 Rorug02G0583300 Rorug05G0398000 Rorug05G0398100 Rorug05G0398200 Rorug05G0580300 Rorug05G0590300 Rorug06G0116000 Rorug06G0116100 Rorug07G0096800 Rorug07G0097100.1 Rorug07G0097200 Rorug07G0098600 Rorug07G0098600 Rorug07G0098700 Rorug07G0099100 Rorug07G0106100 Rorug07G0106200 Rorug07G0106200 Rorug07G0106300 Rorug07G0157600 Rorug07G0157700 Rorug07G0157700 Rorug07G0157800
rosa_samantha Rh1AG255500 Rh1AG256700 Rh1BG225800 Rh1BG226200 Rh1BG230000 Rh1CG195300 Rh1CG238400 Rh1CG238500 Rh1CG238900 Rh1CG239000 Rh1CG239300 Rh1CG239400 Rh1CG239800 Rh1CG240000 Rh1CG240200 Rh1CG240300 Rh1CG244300 Rh1CG406900 Rh1CG407300 Rh1CG407400 Rh2CG343600 Rh2DG383200 Rh3BG205900 Rh4AG404400 Rh4BG415500 Rh5AG455200 Rh5AG455600 Rh5CG497000 Rh5CG497200 Rh7AG228800 Rh7AG230400 Rh7AG230800 Rh7AG231200 Rh7AG231600 Rh7AG231800 Rh7AG232100 Rh7AG241600 Rh7BG236200 Rh7CG238200 Rh7CG239100 Rh7CG243400 Rh7CG244900
rosa_wichuraiana Rw0G023040 Rw1G017780 Rw1G022320 Rw1G022340 Rw1G022410 Rw1G022420 Rw1G022440 Rw1G022460 Rw1G022490 Rw1G022500 Rw1G022530 Rw1G022550 Rw1G022560 Rw1G022600 Rw1G023060 Rw1G038150 Rw1G038160 Rw2G008210 Rw2G022350 Rw2G029290 Rw4G015050 Rw4G019850 Rw5G024060 Rw5G042460 Rw7G019160 Rw7G019460 Rw7G019690 Rw7G019830 Rw7G019860 Rw7G019880 Rw7G019890 Rw7G019930 Rw7G019990 Rw7G020460 Rw7G025100 Rw7G025120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccIII TCCGGA 1 cut(s) 1997
AciI CCGC 2 cut(s) 2156, 2589
AclWI GGATC 3 cut(s) 389, 1539, 1681
AcoI YGGCCR 1 cut(s) 692
AcuI CTGAAG 7 cut(s) 194, 390, 702, 716, 774, 2149, 2528
AfaI GTAC 5 cut(s) 1412, 1957, 2638, 2686, 2816
AfiI CCNNNNNNNGG 4 cut(s) 1138, 2018, 2621, 2766
AflII CTTAAG 2 cut(s) 215, 2738
AflIII ACRYGT 2 cut(s) 1413, 2263
AjnI CCWGG 4 cut(s) 135, 183, 1332, 2772
Alw21I GWGCWC 3 cut(s) 205, 1376, 2747
Alw26I GTCTC 5 cut(s) 10, 620, 681, 2746, 2830
AlwI GGATC 3 cut(s) 389, 1539, 1681
AlwNI CAGNNNCTG 2 cut(s) 1333, 1831
Ama87I CYCGRG 2 cut(s) 617, 1693
Aor13HI TCCGGA 1 cut(s) 1997
AoxI GGCC 5 cut(s) 223, 692, 1329, 1432, 2020
ApaI GGGCCC 1 cut(s) 1436
ApeKI GCWGC 3 cut(s) 867, 870, 1017
Asp700I GAANNNNTTC 2 cut(s) 1049, 2455
AsuHPI GGTGA 2 cut(s) 316, 398
AvaI CYCGRG 2 cut(s) 617, 1693
AvaII GGWCC 8 cut(s) 433, 533, 914, 1261, 1552, 1712, 2122, 2591
BaeGI GKGCMC 1 cut(s) 1436
BalI TGGCCA 1 cut(s) 694
BanII GRGCYC 3 cut(s) 1376, 1436, 2747
BarI GAAGNNNNNNTAC 4 cut(s) 975, 1007, 2440, 2472
BbsI GAAGAC 1 cut(s) 1623
Bbv12I GWGCWC 3 cut(s) 205, 1376, 2747
BbvI GCAGC 3 cut(s) 879, 882, 1029
BccI CCATC 5 cut(s) 70, 926, 1666, 2615, 2648
BciT130I CCWGG 4 cut(s) 137, 185, 1334, 2774
BclI TGATCA 1 cut(s) 78
BcoDI GTCTC 5 cut(s) 10, 620, 681, 2746, 2830
BfaI CTAG 6 cut(s) 1154, 1245, 1556, 1964, 2531, 2616
BfrI CTTAAG 2 cut(s) 215, 2738
BglII AGATCT 2 cut(s) 1080, 1558
BisI GCNGC 4 cut(s) 868, 871, 1018, 2156
BlsI GCNGC 4 cut(s) 869, 872, 1019, 2157
Bme1390I CCNGG 4 cut(s) 137, 185, 1334, 2774
Bme18I GGWCC 8 cut(s) 433, 533, 914, 1261, 1552, 1712, 2122, 2591
BmeT110I CYCGRG 2 cut(s) 617, 1693
BmiI GGNNCC 8 cut(s) 916, 1046, 1434, 1714, 1743, 2149, 2382, 2771
BmrFI CCNGG 4 cut(s) 137, 185, 1334, 2774
BmsI GCATC 4 cut(s) 50, 136, 355, 1797
BoxI GACNNNNGTC 1 cut(s) 1619
BpiI GAAGAC 1 cut(s) 1623
BpmI CTGGAG 1 cut(s) 1950
BpuEI CTTGAG 3 cut(s) 664, 1141, 1588
BsaBI GATNNNNATC 1 cut(s) 83
BsaI GGTCTC 1 cut(s) 10
BsaJI CCNNGG 5 cut(s) 1332, 1579, 1978, 2012, 2071
BsaWI WCCGGW 1 cut(s) 1997
BsaXI ACNNNNNCTCC 2 cut(s) 1726, 1756
Bsc4I CCNNNNNNNGG 4 cut(s) 1138, 2018, 2621, 2766
Bse1I ACTGG 2 cut(s) 2638, 2710
Bse3DI GCAATG 3 cut(s) 1511, 1652, 2158
Bse8I GATNNNNATC 1 cut(s) 83
BseAI TCCGGA 1 cut(s) 1997
BseBI CCWGG 4 cut(s) 137, 185, 1334, 2774
BseDI CCNNGG 5 cut(s) 1332, 1579, 1978, 2012, 2071
BseGI GGATG 5 cut(s) 918, 1342, 1812, 2087, 2782
BseJI GATNNNNATC 1 cut(s) 83
BseLI CCNNNNNNNGG 4 cut(s) 1138, 2018, 2621, 2766
BseMI GCAATG 3 cut(s) 1511, 1652, 2158
BseMII CTCAG 7 cut(s) 451, 766, 1361, 1509, 1709, 2144, 2370
BseNI ACTGG 2 cut(s) 2638, 2710
BseRI GAGGAG 2 cut(s) 1082, 2848
BseSI GKGCMC 1 cut(s) 1436
BseXI GCAGC 3 cut(s) 879, 882, 1029
BseYI CCCAGC 1 cut(s) 1435
BsgI GTGCAG 1 cut(s) 2116
BshFI GGCC 5 cut(s) 225, 694, 1331, 1434, 2022
BsiHKAI GWGCWC 3 cut(s) 205, 1376, 2747
BsiHKCI CYCGRG 2 cut(s) 617, 1693
BsiSI CCGG 3 cut(s) 1352, 1817, 1998
BslFI GGGAC 1 cut(s) 900
BslI CCNNNNNNNGG 4 cut(s) 1138, 2018, 2621, 2766
BsmAI GTCTC 5 cut(s) 10, 620, 681, 2746, 2830
BsmFI GGGAC 1 cut(s) 900
BsnI GGCC 5 cut(s) 225, 694, 1331, 1434, 2022
Bso31I GGTCTC 1 cut(s) 10
BsoBI CYCGRG 2 cut(s) 617, 1693
Bsp120I GGGCCC 1 cut(s) 1432
Bsp1286I GDGCHC 4 cut(s) 205, 1376, 1436, 2747
Bsp13I TCCGGA 1 cut(s) 1997
Bsp1407I TGTACA 3 cut(s) 1410, 1955, 2814
Bsp143I GATC 9 cut(s) 78, 394, 580, 748, 767, 1080, 1531, 1558, 1686
Bsp19I CCATGG 2 cut(s) 1579, 2012
BspACI CCGC 2 cut(s) 2156, 2589
BspANI GGCC 5 cut(s) 225, 694, 1331, 1434, 2022
BspCNI CTCAG 7 cut(s) 450, 765, 1362, 1510, 1710, 2143, 2369
BspEI TCCGGA 1 cut(s) 1997
BspHI TCATGA 1 cut(s) 87
BspLI GGNNCC 8 cut(s) 916, 1046, 1434, 1714, 1743, 2149, 2382, 2771
BspPI GGATC 3 cut(s) 389, 1539, 1681
BspTI CTTAAG 2 cut(s) 215, 2738
BspTNI GGTCTC 1 cut(s) 10
BsrDI GCAATG 3 cut(s) 1511, 1652, 2158
BsrGI TGTACA 3 cut(s) 1410, 1955, 2814
BsrI ACTGG 2 cut(s) 2638, 2710
BssECI CCNNGG 5 cut(s) 1332, 1579, 1978, 2012, 2071
BssMI GATC 9 cut(s) 78, 394, 580, 748, 767, 1080, 1531, 1558, 1686
BssT1I CCWWGG 3 cut(s) 1579, 1978, 2012
Bst2UI CCWGG 4 cut(s) 137, 185, 1334, 2774
Bst4CI ACNGT 5 cut(s) 1827, 1955, 2037, 2058, 2689
BstAFI CTTAAG 2 cut(s) 215, 2738
BstAUI TGTACA 3 cut(s) 1410, 1955, 2814
BstC8I GCNNGC 4 cut(s) 201, 298, 710, 2330
BstDSI CCRYGG 3 cut(s) 1579, 2012, 2071
BstEII GGTNACC 1 cut(s) 2396
BstENI CCTNNNNNAGG 1 cut(s) 2764
BstF5I GGATG 5 cut(s) 918, 1342, 1812, 2087, 2782
BstKTI GATC 9 cut(s) 81, 397, 583, 751, 770, 1083, 1534, 1561, 1689
BstMAI GTCTC 5 cut(s) 10, 620, 681, 2746, 2830
BstMBI GATC 9 cut(s) 78, 394, 580, 748, 767, 1080, 1531, 1558, 1686
BstMWI GCNNNNNNNGC 6 cut(s) 205, 1017, 1431, 1739, 1878, 2103
BstNI CCWGG 4 cut(s) 137, 185, 1334, 2774
BstNSI RCATGY 4 cut(s) 300, 1417, 2267, 2332
BstPAI GACNNNNGTC 1 cut(s) 1619
BstPI GGTNACC 1 cut(s) 2396
BstSCI CCNGG 4 cut(s) 135, 183, 1332, 2772
BstSLI GKGCMC 1 cut(s) 1436
BstV1I GCAGC 3 cut(s) 879, 882, 1029
BstV2I GAAGAC 1 cut(s) 1623
BstX2I RGATCY 2 cut(s) 1080, 1558
BstXI CCANNNNNNTGG 2 cut(s) 1580, 2444
BstYI RGATCY 2 cut(s) 1080, 1558
BsuRI GGCC 5 cut(s) 225, 694, 1331, 1434, 2022
BtgI CCRYGG 3 cut(s) 1579, 2012, 2071
BtgZI GCGATG 1 cut(s) 51
BtsCI GGATG 5 cut(s) 918, 1342, 1812, 2087, 2782
BtsIMutI CAGTG 4 cut(s) 726, 760, 2694, 2703
Cac8I GCNNGC 4 cut(s) 201, 298, 710, 2330
CaiI CAGNNNCTG 2 cut(s) 1333, 1831
CciI TCATGA 1 cut(s) 87
Csp6I GTAC 5 cut(s) 1411, 1956, 2637, 2685, 2815
CspCI CAANNNNNGTGG 2 cut(s) 1877, 1912
CviQI GTAC 5 cut(s) 1411, 1956, 2637, 2685, 2815
DpnI GATC 9 cut(s) 80, 396, 582, 750, 769, 1082, 1533, 1560, 1688
DpnII GATC 9 cut(s) 78, 394, 580, 748, 767, 1080, 1531, 1558, 1686
EaeI YGGCCR 1 cut(s) 692
Ecl136II GAGCTC 2 cut(s) 1374, 2745
Eco130I CCWWGG 3 cut(s) 1579, 1978, 2012
Eco147I AGGCCT 1 cut(s) 225
Eco24I GRGCYC 3 cut(s) 1376, 1436, 2747
Eco31I GGTCTC 1 cut(s) 10
Eco32I GATATC 2 cut(s) 419, 2442
Eco47I GGWCC 8 cut(s) 433, 533, 914, 1261, 1552, 1712, 2122, 2591
Eco53kI GAGCTC 2 cut(s) 1374, 2745
Eco57I CTGAAG 7 cut(s) 194, 390, 702, 716, 774, 2149, 2528
Eco88I CYCGRG 2 cut(s) 617, 1693
Eco91I GGTNACC 1 cut(s) 2396
EcoICRI GAGCTC 2 cut(s) 1374, 2745
EcoNI CCTNNNNNAGG 1 cut(s) 2764
EcoO109I RGGNCCY 3 cut(s) 914, 1330, 1552
EcoO65I GGTNACC 1 cut(s) 2396
EcoRI GAATTC 4 cut(s) 1273, 2341, 2451, 2523
EcoRII CCWGG 4 cut(s) 135, 183, 1332, 2772
EcoRV GATATC 2 cut(s) 419, 2442
EcoT14I CCWWGG 3 cut(s) 1579, 1978, 2012
EcoT22I ATGCAT 1 cut(s) 38
EcoT38I GRGCYC 3 cut(s) 1376, 1436, 2747
ErhI CCWWGG 3 cut(s) 1579, 1978, 2012
FaqI GGGAC 1 cut(s) 900
FauNDI CATATG 1 cut(s) 1618
FbaI TGATCA 1 cut(s) 78
Fnu4HI GCNGC 4 cut(s) 868, 871, 1018, 2156
FokI GGATG 5 cut(s) 905, 1349, 1819, 2074, 2789
FriOI GRGCYC 3 cut(s) 1376, 1436, 2747
Fsp4HI GCNGC 4 cut(s) 868, 871, 1018, 2156
FspBI CTAG 6 cut(s) 1154, 1245, 1556, 1964, 2531, 2616
GluI GCNGC 4 cut(s) 868, 871, 1018, 2156
GsaI CCCAGC 1 cut(s) 1439
GsuI CTGGAG 1 cut(s) 1950
HaeIII GGCC 5 cut(s) 225, 694, 1331, 1434, 2022
HapII CCGG 3 cut(s) 1352, 1817, 1998
HincII GTYRAC 1 cut(s) 1624
HindII GTYRAC 1 cut(s) 1624
HindIII AAGCTT 5 cut(s) 372, 1009, 1254, 1606, 1703
HpaII CCGG 3 cut(s) 1352, 1817, 1998
HphI GGTGA 2 cut(s) 316, 398
Hpy166II GTNNAC 8 cut(s) 232, 533, 1325, 1624, 1774, 2582, 2732, 2815
Hpy188I TCNGA 9 cut(s) 352, 598, 664, 681, 970, 1345, 1371, 2133, 2188
Hpy8I GTNNAC 8 cut(s) 232, 533, 1325, 1624, 1774, 2582, 2732, 2815
HpyAV CCTTC 8 cut(s) 408, 552, 581, 977, 1766, 1950, 2371, 2466
HpyCH4III ACNGT 5 cut(s) 1827, 1955, 2037, 2058, 2689
HpyF10VI GCNNNNNNNGC 6 cut(s) 205, 1017, 1431, 1739, 1878, 2103
Kpn2I TCCGGA 1 cut(s) 1997
Ksp22I TGATCA 1 cut(s) 78
Kzo9I GATC 9 cut(s) 78, 394, 580, 748, 767, 1080, 1531, 1558, 1686
LmnI GCTCC 5 cut(s) 173, 1747, 1982, 2111, 2147
Lsp1109I GCAGC 3 cut(s) 879, 882, 1029
LweI GCATC 4 cut(s) 50, 136, 355, 1797
MaeI CTAG 6 cut(s) 1154, 1245, 1556, 1964, 2531, 2616
MaeIII GTNAC 5 cut(s) 139, 1827, 1916, 2168, 2396
MalI GATC 9 cut(s) 80, 396, 582, 750, 769, 1082, 1533, 1560, 1688
MboI GATC 9 cut(s) 78, 394, 580, 748, 767, 1080, 1531, 1558, 1686
MboII GAAGA 8 cut(s) 42, 339, 630, 780, 828, 1623, 1744, 2532
MflI RGATCY 2 cut(s) 1080, 1558
MhlI GDGCHC 4 cut(s) 205, 1376, 1436, 2747
MlsI TGGCCA 1 cut(s) 694
MluNI TGGCCA 1 cut(s) 694
MlyI GAGTC 4 cut(s) 484, 1034, 1079, 1502
MmeI TCCRAC 2 cut(s) 195, 1694
Mox20I TGGCCA 1 cut(s) 694
Mph1103I ATGCAT 1 cut(s) 38
MroI TCCGGA 1 cut(s) 1997
MroXI GAANNNNTTC 2 cut(s) 1049, 2455
MscI TGGCCA 1 cut(s) 694
MslI CAYNNNNRTG 7 cut(s) 86, 938, 1911, 2092, 2333, 2608, 2666
Msp20I TGGCCA 1 cut(s) 694
MspCI CTTAAG 2 cut(s) 215, 2738
MspI CCGG 3 cut(s) 1352, 1817, 1998
MspR9I CCNGG 4 cut(s) 137, 185, 1334, 2774
MvaI CCWGG 4 cut(s) 137, 185, 1334, 2774
MwoI GCNNNNNNNGC 6 cut(s) 205, 1017, 1431, 1739, 1878, 2103
NcoI CCATGG 2 cut(s) 1579, 2012
NdeI CATATG 1 cut(s) 1618
NdeII GATC 9 cut(s) 78, 394, 580, 748, 767, 1080, 1531, 1558, 1686
NlaIV GGNNCC 8 cut(s) 916, 1046, 1434, 1714, 1743, 2149, 2382, 2771
NsiI ATGCAT 1 cut(s) 38
NspI RCATGY 4 cut(s) 300, 1417, 2267, 2332
PaeI GCATGC 2 cut(s) 300, 2332
PaeR7I CTCGAG 1 cut(s) 617
PagI TCATGA 1 cut(s) 87
PceI AGGCCT 1 cut(s) 225
PciI ACATGT 2 cut(s) 1413, 2263
PdmI GAANNNNTTC 2 cut(s) 1049, 2455
PfeI GAWTC 7 cut(s) 466, 1384, 1453, 2076, 2414, 2673, 2697
PfoI TCCNGGA 1 cut(s) 2772
PkrI GCNGC 4 cut(s) 869, 872, 1019, 2157
PleI GAGTC 4 cut(s) 484, 1033, 1078, 1502
PpsI GAGTC 4 cut(s) 484, 1033, 1078, 1502
PpuMI RGGWCCY 2 cut(s) 914, 1552
PscI ACATGT 2 cut(s) 1413, 2263
PshAI GACNNNNGTC 1 cut(s) 1619
Psp124BI GAGCTC 2 cut(s) 1376, 2747
Psp5II RGGWCCY 2 cut(s) 914, 1552
Psp6I CCWGG 4 cut(s) 135, 183, 1332, 2772
PspEI GGTNACC 1 cut(s) 2396
PspFI CCCAGC 1 cut(s) 1435
PspGI CCWGG 4 cut(s) 135, 183, 1332, 2772
PspN4I GGNNCC 8 cut(s) 916, 1046, 1434, 1714, 1743, 2149, 2382, 2771
PspOMI GGGCCC 1 cut(s) 1432
PspPPI RGGWCCY 2 cut(s) 914, 1552
PstNI CAGNNNCTG 2 cut(s) 1333, 1831
PsuI RGATCY 2 cut(s) 1080, 1558
RsaI GTAC 5 cut(s) 1412, 1957, 2638, 2686, 2816
RsaNI GTAC 5 cut(s) 1411, 1956, 2637, 2685, 2815
RseI CAYNNNNRTG 7 cut(s) 86, 938, 1911, 2092, 2333, 2608, 2666
SacI GAGCTC 2 cut(s) 1376, 2747
SatI GCNGC 4 cut(s) 868, 871, 1018, 2156
Sau3AI GATC 9 cut(s) 78, 394, 580, 748, 767, 1080, 1531, 1558, 1686
SchI GAGTC 4 cut(s) 484, 1034, 1079, 1502
ScrFI CCNGG 4 cut(s) 137, 185, 1334, 2774
SduI GDGCHC 4 cut(s) 205, 1376, 1436, 2747
SfaNI GCATC 4 cut(s) 50, 136, 355, 1797
Sfr274I CTCGAG 1 cut(s) 617
SinI GGWCC 8 cut(s) 433, 533, 914, 1261, 1552, 1712, 2122, 2591
SlaI CTCGAG 1 cut(s) 617
SmiMI CAYNNNNRTG 7 cut(s) 86, 938, 1911, 2092, 2333, 2608, 2666
SmlI CTYRAG 6 cut(s) 215, 617, 643, 1120, 1603, 2738
SmoI CTYRAG 6 cut(s) 215, 617, 643, 1120, 1603, 2738
SphI GCATGC 2 cut(s) 300, 2332
SseBI AGGCCT 1 cut(s) 225
SsiI CCGC 2 cut(s) 2156, 2589
SspI AATATT 3 cut(s) 843, 1503, 1682
SspMI CTAG 6 cut(s) 1154, 1245, 1556, 1964, 2531, 2616
SstI GAGCTC 2 cut(s) 1376, 2747
StuI AGGCCT 1 cut(s) 225
StyD4I CCNGG 4 cut(s) 135, 183, 1332, 2772
StyI CCWWGG 3 cut(s) 1579, 1978, 2012
TaaI ACNGT 5 cut(s) 1827, 1955, 2037, 2058, 2689
TaqI TCGA 5 cut(s) 493, 579, 618, 1761, 2468
TatI WGTACW 4 cut(s) 1410, 1955, 2684, 2814
TauI GCSGC 1 cut(s) 2158
TfiI GAWTC 7 cut(s) 466, 1384, 1453, 2076, 2414, 2673, 2697
TscAI CASTG 4 cut(s) 726, 760, 2694, 2710
TseI GCWGC 3 cut(s) 867, 870, 1017
TspDTI ATGAA 4 cut(s) 466, 1134, 2102, 2172
TspGWI ACGGA 1 cut(s) 2088
TspRI CASTG 4 cut(s) 726, 760, 2694, 2710
Vha464I CTTAAG 2 cut(s) 215, 2738
VpaK11BI GGWCC 8 cut(s) 433, 533, 914, 1261, 1552, 1712, 2122, 2591
XagI CCTNNNNNAGG 1 cut(s) 2764
XceI RCATGY 4 cut(s) 300, 1417, 2267, 2332
XcmI CCANNNNNNNNNTGG 2 cut(s) 983, 2116
XhoI CTCGAG 1 cut(s) 617
XmnI GAANNNNTTC 2 cut(s) 1049, 2455
XspI CTAG 6 cut(s) 1154, 1245, 1556, 1964, 2531, 2616
Zsp2I ATGCAT 1 cut(s) 38
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.