Rmu_sc0005065.1_g000029

Leucine Rich repeat

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005065.1
Physical Location & Seq
Forward (+)
119437 .. 122184
2748 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005065.1_g000029.1.cds

Sequence Viewer

Length: 2748 bp
atgcattatgttttggttgggcttgtgtgcctggccattgcctctgctatttgttgttcaagtgttggaagctccaacaacatcatgtgcttggagagtgaaaggcacgctcttctccaattcaaacaaggccttgtggataagtccaatgctcttgcctcttggaaaagtgagaaagattgctgcaagtggagaggaatagcatgcaacaaccaaacaggtcatgtcatcactctagatttgtcctctagttatgatccatatctcaattctactaaagttccgttaataagaggtgaaattagtccttcactacttgaattgcaatatctaaattacttggacctcagttataatgattttggaggaatgaccattcccaagttcattggctctttgagtcaattgaaagaactcaaacttgcaggtgctaatttcagtggaattgttcctccccaacttggaaacctctctaatttgcacactcttgatctttccaactttgatcctttcaagaactatgatcttatcagggactatgatgttcgttcagaaaatcttgagtggttatctcatctttcttccttgagatacctaaacatgtcaggagtagatttgtctatggttgtgaattggccacaatctttaagcaagctcactgtactgacagagcttcagttatccgggtgtaaccttcctgatgtcaatctaagatcactttcctttattaattcttccacatctctccaactccttgacctctctgagaactctcttatttcttcaatattttattggatagccaatgtcagcagcaactttgtccatattcatctctcttccaacaatcttgaaggtcccatcccagatgtcttcacaagcatgctttctctagtaacactagttctgtcacggaatcaacttgaaggtgggataccaaaaagctttcaaaacttatgcagcttagagtcgttgaccttaaggttcaaccaattgtctgaaaacattgaggactctgttaaaaacttgtcttgtgctgagaacacactcgagaacttggacttgttacaaaaccagttttgggggtcatggccagatttgaaacgtttttcaaagttaagagagttatggctttccaggaatcaactaaatgggtctgtacccgagagtgtcgggcaactctctagccttgaaacattaattctctccaggaattctttgagtggtgtcataacagaggcccactttttgaacctctctcgtttacagtatttgagtctttctggtaatcgtttctctatcaacctgagctctgattggaatccaccatttcaacttactagtttatacatggactcctacaagctgggcccagcttttcccaaatggattctaaggcaaacgaatcttacccttctttctctctctaatgctagtctattaggatcattacctaataagttttgggatctatttcctcttttatctcaattagatctctctatgaaccaaatccatggaaaactgccgaatctgtcaagaacaagttcgaatctctttatgttgcgtctctcgaacaacatgttttctgggcccctgtcttccttttgtgcaacactgcacgctccatccttgtattctcttgacctatctggtaatctgctgtcaggagagcttcctaattgttggatgcaatttcaatatttgaacgagttggatttgggaaagaataaattatctggaaaaataccaagctccttaggcaatctacagggaattcaggtattgcgtttacatgaaaacaacttttcaggagaagtgccttctttagagaactgtaccaacttattgatagttgaccttggcgacaataacctctcggggaagataccaacatggattggccaaagtctaacaaatttggtgattctacgcttacggtcaaatgagtttaatggaatcatacccttctccctgtgcagtctagctgccattcatgttttggacctctcttacaacaatatttcaggaggcttgccactttgcttcaataacataaccgctttggctgatgatttgggactttatgatgttattgtggaacttgtgtggaaaggaacagaaattgagtttcccaatattacaagtttgagaagcattgacatatcaagcaacaatttgattggggaaattccgcaaagtatagcaagtatgacagagttgatttctctgaacctgtctagaaacaaattgacgggaaagcttcctgaagactttggtaacttgaagatgttagaatctcttgatttgtcaagaaaccagatatctggtaaaattcctgcaagttttgcgagcttaaactttcttagtgtcttagacttatcacacaacaacttgtcaggaagaattccacttggcactcaactacaaagttttgatgcttctaaatatatgggaaatcttggactttgtggaccaccgctgacacaaaattgtccaggagatggaacagttcaagctgatgataacaaagaacatgataaagatggtctcataagcctgggattttttatcagtgcagtgctgggattcgtcactggattttggatggtctgcggcagtttactgcttaagacttcttggagatatgcttatttcagattcctggacaatgcaaaagattggatatatttcaaaaccgcagcgtacaaggcaaaattgcagggggacttcaaagataaatggtaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

915

Amino Acids

101.53

Weight (kDa)

5.56

Isoelectric Point (pI)

39.43

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000028)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g45420 FvH4_4g14031 FvH4_5g20780 FvH4_6g28530 FvH4_7g14020 FvH4_7g14030 FvH4_7g14040 FvH4_7g14050 FvH4_7g14060 FvH4_7g14070 FvH4_7g14090 FvH4_7g14110 FvH4_7g14140 FvH4_7g14450
malus_domestica MD00G1189100.v1.1 MD01G1018600.v1.1 MD01G1053800.v1.1 MD01G1053900.v1.1 MD01G1054000.v1.1 MD01G1054100.v1.1 MD01G1056700.v1.1 MD01G1057000.v1.1 MD01G1057300.v1.1 MD01G1057400.v1.1 MD01G1061600.v1.1 MD01G1061800.v1.1 MD01G1061900.v1.1 MD01G1062000.v1.1 MD01G1062400.v1.1 MD01G1062500.v1.1 MD01G1063200.v1.1 MD01G1063300.v1.1 MD01G1063400.v1.1 MD01G1063700.v1.1 MD01G1063900.v1.1 MD01G1064200.v1.1 MD01G1064300.v1.1 MD01G1064400.v1.1 MD01G1064600.v1.1 MD01G1064700.v1.1 MD01G1181100.v1.1 MD01G1212300.v1.1 MD01G1212500.v1.1 MD01G1212600.v1.1 MD02G1271900.v1.1 MD07G1136500.v1.1 MD07G1139300.v1.1 MD07G1141200.v1.1 MD07G1144700.v1.1 MD08G1144200.v1.1 MD14G1186300.v1.1 MD14G1186500.v1.1 MD14G1186700.v1.1 MD14G1186800.v1.1 MD15G1351300.v1.1 MD15G1439500.v1.1
prunus_persica Prupe.1G067000_v2.0.a1 Prupe.2G077400_v2.0.a1 Prupe.2G077700_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078600_v2.0.a1 Prupe.2G078800_v2.0.a1 Prupe.2G099600_v2.0.a1 Prupe.2G099700_v2.0.a1 Prupe.2G155100_v2.0.a1 Prupe.2G155500_v2.0.a1 Prupe.2G155600_v2.0.a1 Prupe.2G155800_v2.0.a1 Prupe.2G155900_v2.0.a1 Prupe.2G156100_v2.0.a1 Prupe.2G166100_v2.0.a1 Prupe.2G166300_v2.0.a1 Prupe.2G167500_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G168400_v2.0.a1 Prupe.2G168700_v2.0.a1 Prupe.2G168800_v2.0.a1 Prupe.2G169000_v2.0.a1 Prupe.2G169100_v2.0.a1 Prupe.2G169200_v2.0.a1 Prupe.2G169500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G172300_v2.0.a1 Prupe.2G304800_v2.0.a1 Prupe.4G264800_v2.0.a1 Prupe.4G265000_v2.0.a1 Prupe.5G051900_v2.0.a1 Prupe.5G052000_v2.0.a1
pyrus_communis pycom01g08380 pycom01g08430 pycom01g08490 pycom01g08520 pycom01g08540 pycom01g08550 pycom01g08600 pycom01g08630 pycom01g08660 pycom01g08720 pycom01g09180 pycom01g09200 pycom01g09210 pycom01g09270 pycom01g09280 pycom01g09300 pycom01g09380 pycom01g19110 pycom01g22260 pycom01g22310 pycom01g22330 pycom01g22350 pycom01g22360 pycom02g23250 pycom07g13420 pycom07g13670 pycom07g13900 pycom07g13910 pycom07g13960 pycom07g13970 pycom07g25680 pycom11g22830
rosa_chinensis RchiOBHm_Chr0c22g0500431 RchiOBHm_Chr0c22g0500441 RchiOBHm_Chr0c22g0500561 RchiOBHm_Chr0c22g0500571 RchiOBHm_Chr0c22g0500611 RchiOBHm_Chr0c22g0500621 RchiOBHm_Chr0c22g0500631 RchiOBHm_Chr0c22g0500681 RchiOBHm_Chr1g0348221 RchiOBHm_Chr1g0348251 RchiOBHm_Chr1g0352861 RchiOBHm_Chr1g0352871 RchiOBHm_Chr1g0352891 RchiOBHm_Chr1g0352901 RchiOBHm_Chr1g0354671 RchiOBHm_Chr1g0354701 RchiOBHm_Chr1g0354711 RchiOBHm_Chr1g0354751 RchiOBHm_Chr1g0354761 RchiOBHm_Chr1g0354841 RchiOBHm_Chr1g0354851 RchiOBHm_Chr1g0354881 RchiOBHm_Chr1g0354971 RchiOBHm_Chr1g0354981 RchiOBHm_Chr1g0354991 RchiOBHm_Chr1g0355001 RchiOBHm_Chr1g0355011 RchiOBHm_Chr1g0355021 RchiOBHm_Chr1g0355861 RchiOBHm_Chr1g0379671 RchiOBHm_Chr1g0379681 RchiOBHm_Chr2g0096591 RchiOBHm_Chr2g0132821 RchiOBHm_Chr3g0454901 RchiOBHm_Chr3g0472711 RchiOBHm_Chr4g0400791 RchiOBHm_Chr5g0069481 RchiOBHm_Chr5g0069511 RchiOBHm_Chr5g0069551 RchiOBHm_Chr6g0254651 RchiOBHm_Chr6g0259721 RchiOBHm_Chr7g0205911 RchiOBHm_Chr7g0206401 RchiOBHm_Chr7g0206571 RchiOBHm_Chr7g0206581 RchiOBHm_Chr7g0206621 RchiOBHm_Chr7g0206631 RchiOBHm_Chr7g0206641 RchiOBHm_Chr7g0206681 RchiOBHm_Chr7g0206691 RchiOBHm_Chr7g0206751 RchiOBHm_Chr7g0206761 RchiOBHm_Chr7g0206851 RchiOBHm_Chr7g0206911 RchiOBHm_Chr7g0206921 RchiOBHm_Chr7g0207001 RchiOBHm_Chr7g0207011 RchiOBHm_Chr7g0207031 RchiOBHm_Chr7g0207101 RchiOBHm_Chr7g0207161 RchiOBHm_Chr7g0207201 RchiOBHm_Chr7g0207271 RchiOBHm_Chr7g0207301 RchiOBHm_Chr7g0207311 RchiOBHm_Chr7g0207421 RchiOBHm_Chr7g0207481 RchiOBHm_Chr7g0207491 RchiOBHm_Chr7g0207501 RchiOBHm_Chr7g0207521 RchiOBHm_Chr7g0207531 RchiOBHm_Chr7g0207561 RchiOBHm_Chr7g0207571 RchiOBHm_Chr7g0207581 RchiOBHm_Chr7g0207601 RchiOBHm_Chr7g0207621 RchiOBHm_Chr7g0207631 RchiOBHm_Chr7g0207651 RchiOBHm_Chr7g0207661 RchiOBHm_Chr7g0207711 RchiOBHm_Chr7g0207761 RchiOBHm_Chr7g0207801 RchiOBHm_Chr7g0208821 RchiOBHm_Chr7g0208831 RchiOBHm_Chr7g0208841 RchiOBHm_Chr7g0213601 RchiOBHm_Chr7g0215981 RchiOBHm_Chr7g0216021
rosa_laevigata RLG00000003193 RLG00000003194 RLG00000003287 RLG00000003288 RLG00000003289 RLG00000003293 RLG00000003294 RLG00000003295 RLG00000003297 RLG00000003299 RLG00000003301 RLG00000003327 RLG00000003347 RLG00000016653 RLG00000018642 RLG00000018643 RLG00000019285 RLG00000022542 RLG00000026368 RLG00000026371 RLG00000028124 RLG00000028125 RLG00000028183 RLG00000028184 RLG00000028185 RLG00000028188 RLG00000028673 RLG00000029267 RLG00000029325 RLG00000029674 RLG00000032883 RLG00000036055 RLG00000036058 RLG00000036065 RLG00000036068 RLG00000036071 RLG00000036072 RLG00000036075 RLG00000036076
rosa_multiflora Rmu_co8250183.1_g000001 Rmu_co8271981.1_g000001 Rmu_co8410829.1_g000001 Rmu_co8432879.1_g000001 Rmu_co8441941.1_g000001 Rmu_sc0000076.1_g000031 Rmu_sc0000738.1_g000038 Rmu_sc0000848.1_g000003 Rmu_sc0000848.1_g000014 Rmu_sc0000848.1_g000015 Rmu_sc0000848.1_g000016 Rmu_sc0001264.1_g000001 Rmu_sc0002284.1_g000018 Rmu_sc0002356.1_g000011 Rmu_sc0003020.1_g000003 Rmu_sc0003115.1_g000001 Rmu_sc0003115.1_g000002 Rmu_sc0003115.1_g000003 Rmu_sc0003115.1_g000004 Rmu_sc0003115.1_g000005 Rmu_sc0003115.1_g000008 Rmu_sc0003115.1_g000010 Rmu_sc0003115.1_g000011 Rmu_sc0003115.1_g000014 Rmu_sc0003565.1_g000002 Rmu_sc0003652.1_g000013 Rmu_sc0003652.1_g000015 Rmu_sc0003652.1_g000016 Rmu_sc0003652.1_g000019 Rmu_sc0003940.1_g000001 Rmu_sc0003940.1_g000004 Rmu_sc0003940.1_g000009 Rmu_sc0004084.1_g000010 Rmu_sc0004705.1_g000021 Rmu_sc0004972.1_g000007 Rmu_sc0004987.1_g000002 Rmu_sc0004987.1_g000006 Rmu_sc0005065.1_g000018 Rmu_sc0005065.1_g000029 Rmu_sc0005391.1_g000002 Rmu_sc0005633.1_g000003 Rmu_sc0005633.1_g000008 Rmu_sc0006632.1_g000014 Rmu_sc0006632.1_g000018 Rmu_sc0006681.1_g000010 Rmu_sc0006681.1_g000011 Rmu_sc0006733.1_g000003 Rmu_sc0007385.1_g000005 Rmu_sc0007385.1_g000007 Rmu_sc0007385.1_g000009 Rmu_sc0007385.1_g000016 Rmu_sc0007645.1_g000002 Rmu_sc0007645.1_g000003 Rmu_sc0007645.1_g000022 Rmu_sc0007828.1_g000008 Rmu_sc0008509.1_g000003 Rmu_sc0008509.1_g000015 Rmu_sc0008509.1_g000016 Rmu_sc0008509.1_g000020 Rmu_sc0008509.1_g000030 Rmu_sc0008509.1_g000041 Rmu_sc0008756.1_g000001 Rmu_sc0008756.1_g000003 Rmu_sc0013028.1_g000002 Rmu_sc0013028.1_g000003 Rmu_sc0013028.1_g000005 Rmu_sc0013160.1_g000001 Rmu_sc0014454.1_g000009 Rmu_sc0014455.1_g000007 Rmu_sc0014659.1_g000004 Rmu_sc0017798.1_g000002 Rmu_sc0017798.1_g000004 Rmu_sc0029608.1_g000001 Rmu_sc0037861.1_g000001 Rmu_sc0038750.1_g000001 Rmu_sc0042995.1_g000001 Rmu_ssc0000161.1_g000017
rosa_roxburghii Rroxscaffold_1G00009180 Rroxscaffold_1G00009190 Rroxscaffold_1G00011450 Rroxscaffold_1G00011480 Rroxscaffold_2G00111660 Rroxscaffold_2G00113570 Rroxscaffold_2G00122140 Rroxscaffold_3G00243730 Rroxscaffold_3G00245750 Rroxscaffold_3G00245760 Rroxscaffold_3G00250220 Rroxscaffold_3G00251160 Rroxscaffold_3G00251270 Rroxscaffold_3G00251280 Rroxscaffold_3G00251300 Rroxscaffold_3G00251340 Rroxscaffold_3G00251350 Rroxscaffold_3G00251390 Rroxscaffold_3G00251400 Rroxscaffold_3G00251560 Rroxscaffold_3G00251570 Rroxscaffold_3G00251870 Rroxscaffold_3G00252200 Rroxscaffold_3G00252210 Rroxscaffold_4G00279970 Rroxscaffold_4G00299970 Rroxscaffold_4G00300760 Rroxscaffold_4G00300780 Rroxscaffold_4G00300810 Rroxscaffold_4G00300850 Rroxscaffold_4G00307080 Rroxscaffold_4G00307100 Rroxscaffold_4G00313990 Rroxscaffold_6G00405080
rosa_rugosa Rorug01G0193600 Rorug01G0193700 Rorug01G0243800 Rorug01G0244000 Rorug01G0244000 Rorug01G0244400 Rorug01G0414300.1 Rorug01G0414500 Rorug01G0414600 Rorug02G0235600 Rorug02G0307900 Rorug02G0583100 Rorug02G0583200 Rorug02G0583300 Rorug05G0398000 Rorug05G0398100 Rorug05G0398200 Rorug05G0580300 Rorug05G0590300 Rorug06G0116000 Rorug06G0116100 Rorug07G0096800 Rorug07G0097100.1 Rorug07G0097200 Rorug07G0098600 Rorug07G0098600 Rorug07G0098700 Rorug07G0099100 Rorug07G0106100 Rorug07G0106200 Rorug07G0106200 Rorug07G0106300 Rorug07G0157600 Rorug07G0157700 Rorug07G0157700 Rorug07G0157800
rosa_samantha Rh1AG255500 Rh1AG256700 Rh1BG225800 Rh1BG226200 Rh1BG230000 Rh1CG195300 Rh1CG238400 Rh1CG238500 Rh1CG238900 Rh1CG239000 Rh1CG239300 Rh1CG239400 Rh1CG239800 Rh1CG240000 Rh1CG240200 Rh1CG240300 Rh1CG244300 Rh1CG406900 Rh1CG407300 Rh1CG407400 Rh2CG343600 Rh2DG383200 Rh3BG205900 Rh4AG404400 Rh4BG415500 Rh5AG455200 Rh5AG455600 Rh5CG497000 Rh5CG497200 Rh7AG228800 Rh7AG230400 Rh7AG230800 Rh7AG231200 Rh7AG231600 Rh7AG231800 Rh7AG232100 Rh7AG241600 Rh7BG236200 Rh7CG238200 Rh7CG239100 Rh7CG243400 Rh7CG244900
rosa_wichuraiana Rw0G023040 Rw1G017780 Rw1G022320 Rw1G022340 Rw1G022410 Rw1G022420 Rw1G022440 Rw1G022460 Rw1G022490 Rw1G022500 Rw1G022530 Rw1G022550 Rw1G022560 Rw1G022600 Rw1G023060 Rw1G038150 Rw1G038160 Rw2G008210 Rw2G022350 Rw2G029290 Rw4G015050 Rw4G019850 Rw5G024060 Rw5G042460 Rw7G019160 Rw7G019460 Rw7G019690 Rw7G019830 Rw7G019860 Rw7G019880 Rw7G019890 Rw7G019930 Rw7G019990 Rw7G020460 Rw7G025100 Rw7G025120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 354
AarI CACCTGC 1 cut(s) 416
Acc36I ACCTGC 1 cut(s) 416
AccB7I CCANNNNNTGG 1 cut(s) 2504
AciI CCGC 5 cut(s) 2061, 2195, 2480, 2616, 2700
AclI AACGTT 1 cut(s) 1105
AclWI GGATC 4 cut(s) 251, 500, 1453, 1476
AcoI YGGCCR 4 cut(s) 33, 635, 1091, 1903
AcsI RAATTY 6 cut(s) 1213, 1776, 1918, 2190, 2334, 2406
AcuI CTGAAG 2 cut(s) 659, 2289
AfaI GTAC 4 cut(s) 663, 1161, 1840, 2708
AfiI CCNNNNNNNGG 3 cut(s) 461, 1081, 2504
AflII CTTAAG 2 cut(s) 979, 2630
AflIII ACRYGT 2 cut(s) 600, 1581
AhlI ACTAGT 2 cut(s) 901, 1340
AjnI CCWGG 6 cut(s) 30, 1136, 1208, 2497, 2559, 2664
Alw21I GWGCWC 1 cut(s) 1313
Alw26I GTCTC 2 cut(s) 1574, 2555
AlwI GGATC 4 cut(s) 251, 500, 1453, 1476
Ama87I CYCGRG 3 cut(s) 1049, 1163, 1879
AoxI GGCC 8 cut(s) 33, 130, 635, 1091, 1239, 1369, 1592, 1903
ApaI GGGCCC 2 cut(s) 1373, 1596
ApeKI GCWGC 5 cut(s) 183, 813, 960, 1988, 2702
ApoI RAATTY 6 cut(s) 1213, 1776, 1918, 2190, 2334, 2406
AseI ATTAAT 2 cut(s) 729, 1199
Asp700I GAANNNNTTC 1 cut(s) 1546
AspS9I GGNCC 9 cut(s) 343, 857, 1240, 1369, 1370, 1592, 1593, 2005, 2474
AsuC2I CCSGG 1 cut(s) 685
AsuHPI GGTGA 2 cut(s) 308, 1936
AsuII TTCGAA 1 cut(s) 1550
AvaI CYCGRG 3 cut(s) 1049, 1163, 1879
AvaII GGWCC 4 cut(s) 343, 857, 2005, 2474
AxyI CCTNAGG 1 cut(s) 1759
BaeGI GKGCMC 2 cut(s) 1373, 1596
BalI TGGCCA 4 cut(s) 35, 637, 1093, 1905
BanII GRGCYC 3 cut(s) 1313, 1373, 1596
BarI GAAGNNNNNNTAC 2 cut(s) 918, 950
BbsI GAAGAC 3 cut(s) 865, 1593, 2277
Bbv12I GWGCWC 1 cut(s) 1313
BbvI GCAGC 5 cut(s) 170, 825, 972, 1975, 2714
BccI CCATC 5 cut(s) 869, 1636, 2498, 2540, 2602
BciT130I CCWGG 6 cut(s) 32, 1138, 1210, 2499, 2561, 2666
BciVI GTATCC 1 cut(s) 927
BcnI CCSGG 1 cut(s) 685
BcoDI GTCTC 2 cut(s) 1574, 2555
BcuI ACTAGT 2 cut(s) 901, 1340
BfaI CTAG 9 cut(s) 236, 249, 893, 902, 1185, 1341, 1434, 1985, 2241
BfmI CTRYAG 1 cut(s) 1769
BfrI CTTAAG 2 cut(s) 979, 2630
BfuAI ACCTGC 1 cut(s) 416
BfuI GTATCC 1 cut(s) 927
BglII AGATCT 1 cut(s) 1495
BisI GCNGC 6 cut(s) 184, 814, 961, 1989, 2617, 2703
BlsI GCNGC 6 cut(s) 185, 815, 962, 1990, 2618, 2704
Bme1390I CCNGG 7 cut(s) 32, 685, 1138, 1210, 2499, 2561, 2666
Bme18I GGWCC 4 cut(s) 343, 857, 2005, 2474
BmeT110I CYCGRG 3 cut(s) 1049, 1163, 1879
BmgT120I GGNCC 9 cut(s) 343, 857, 1240, 1369, 1370, 1592, 1593, 2005, 2474
BmiI GGNNCC 4 cut(s) 859, 1371, 1594, 1595
BmrFI CCNGG 7 cut(s) 32, 685, 1138, 1210, 2499, 2561, 2666
BmsI GCATC 2 cut(s) 1680, 2428
BpiI GAAGAC 3 cut(s) 865, 1593, 2277
BpmI CTGGAG 1 cut(s) 1192
Bpu10I CCTNAGC 1 cut(s) 1307
Bpu14I TTCGAA 1 cut(s) 1550
BpuEI CTTGAG 2 cut(s) 581, 607
BpuMI CCSGG 1 cut(s) 685
BsaBI GATNNNNATC 3 cut(s) 261, 705, 1320
BsaI GGTCTC 1 cut(s) 2555
BsaJI CCNNGG 3 cut(s) 1516, 1861, 2560
BsaXI ACNNNNNCTCC 2 cut(s) 1340, 1370
Bsc4I CCNNNNNNNGG 3 cut(s) 461, 1081, 2504
Bse1I ACTGG 2 cut(s) 1075, 2602
Bse21I CCTNAGG 1 cut(s) 1759
Bse3DI GCAATG 1 cut(s) 36
Bse8I GATNNNNATC 3 cut(s) 261, 705, 1320
BseBI CCWGG 6 cut(s) 32, 1138, 1210, 2499, 2561, 2666
BseDI CCNNGG 3 cut(s) 1516, 1861, 2560
BseGI GGATG 4 cut(s) 861, 1628, 1695, 2613
BseJI GATNNNNATC 3 cut(s) 261, 705, 1320
BseLI CCNNNNNNNGG 3 cut(s) 461, 1081, 2504
BseMI GCAATG 1 cut(s) 36
BseMII CTCAG 4 cut(s) 361, 756, 1029, 1298
BseNI ACTGG 2 cut(s) 1075, 2602
BseSI GKGCMC 2 cut(s) 1373, 1596
BseXI GCAGC 5 cut(s) 170, 825, 972, 1975, 2714
BseYI CCCAGC 3 cut(s) 1366, 1372, 2584
BsgI GTGCAG 3 cut(s) 1604, 1999, 2598
BshFI GGCC 8 cut(s) 35, 132, 637, 1093, 1241, 1371, 1594, 1905
BsiHKAI GWGCWC 1 cut(s) 1313
BsiHKCI CYCGRG 3 cut(s) 1049, 1163, 1879
BsiSI CCGG 1 cut(s) 684
BslFI GGGAC 4 cut(s) 548, 843, 2094, 2741
BslI CCNNNNNNNGG 3 cut(s) 461, 1081, 2504
BsmAI GTCTC 2 cut(s) 1574, 2555
BsmBI CGTCTC 1 cut(s) 1574
BsmFI GGGAC 4 cut(s) 548, 843, 2094, 2741
BsnI GGCC 8 cut(s) 35, 132, 637, 1093, 1241, 1371, 1594, 1905
Bso31I GGTCTC 1 cut(s) 2555
BsoBI CYCGRG 3 cut(s) 1049, 1163, 1879
Bsp119I TTCGAA 1 cut(s) 1550
Bsp120I GGGCCC 2 cut(s) 1369, 1592
Bsp1286I GDGCHC 3 cut(s) 1313, 1373, 1596
Bsp143I GATC 8 cut(s) 256, 490, 505, 523, 713, 1445, 1468, 1495
Bsp19I CCATGG 1 cut(s) 1516
BspACI CCGC 5 cut(s) 2061, 2195, 2480, 2616, 2700
BspANI GGCC 8 cut(s) 35, 132, 637, 1093, 1241, 1371, 1594, 1905
BspCNI CTCAG 4 cut(s) 360, 757, 1030, 1299
BspLI GGNNCC 4 cut(s) 859, 1371, 1594, 1595
BspMI ACCTGC 1 cut(s) 416
BspPI GGATC 4 cut(s) 251, 500, 1453, 1476
BspQI GCTCTTC 1 cut(s) 117
BspT104I TTCGAA 1 cut(s) 1550
BspTI CTTAAG 2 cut(s) 979, 2630
BspTNI GGTCTC 1 cut(s) 2555
BsrDI GCAATG 1 cut(s) 36
BsrI ACTGG 2 cut(s) 1075, 2602
BssECI CCNNGG 3 cut(s) 1516, 1861, 2560
BssMI GATC 8 cut(s) 256, 490, 505, 523, 713, 1445, 1468, 1495
BssT1I CCWWGG 2 cut(s) 1516, 1861
Bst2UI CCWGG 6 cut(s) 32, 1138, 1210, 2499, 2561, 2666
Bst4CI ACNGT 5 cut(s) 661, 1269, 1838, 1941, 2512
Bst6I CTCTTC 2 cut(s) 117, 844
BstAFI CTTAAG 2 cut(s) 979, 2630
BstAPI GCANNNNNTGC 1 cut(s) 2348
BstBI TTCGAA 1 cut(s) 1550
BstC8I GCNNGC 7 cut(s) 108, 205, 653, 884, 1623, 2036, 2353
BstDSI CCRYGG 1 cut(s) 1516
BstF5I GGATG 4 cut(s) 861, 1628, 1695, 2613
BstKTI GATC 8 cut(s) 259, 493, 508, 526, 716, 1448, 1471, 1498
BstMAI GTCTC 2 cut(s) 1574, 2555
BstMBI GATC 8 cut(s) 256, 490, 505, 523, 713, 1445, 1468, 1495
BstMWI GCNNNNNNNGC 3 cut(s) 1761, 2348, 2711
BstNI CCWGG 6 cut(s) 32, 1138, 1210, 2499, 2561, 2666
BstNSI RCATGY 4 cut(s) 207, 604, 886, 1585
BstSCI CCNGG 7 cut(s) 30, 683, 1136, 1208, 2497, 2559, 2664
BstSFI CTRYAG 1 cut(s) 1769
BstSLI GKGCMC 2 cut(s) 1373, 1596
BstV1I GCAGC 5 cut(s) 170, 825, 972, 1975, 2714
BstV2I GAAGAC 3 cut(s) 865, 1593, 2277
BstX2I RGATCY 2 cut(s) 1468, 1495
BstXI CCANNNNNNTGG 2 cut(s) 1517, 2327
BstYI RGATCY 2 cut(s) 1468, 1495
Bsu36I CCTNAGG 1 cut(s) 1759
BsuI GTATCC 1 cut(s) 927
BsuRI GGCC 8 cut(s) 35, 132, 637, 1093, 1241, 1371, 1594, 1905
BtgI CCRYGG 1 cut(s) 1516
BtsCI GGATG 4 cut(s) 861, 1628, 1695, 2613
BtsI GCAGTG 2 cut(s) 1616, 2586
BtsIMutI CAGTG 6 cut(s) 445, 657, 1616, 2581, 2586, 2595
BveI ACCTGC 1 cut(s) 416
Cac8I GCNNGC 7 cut(s) 108, 205, 653, 884, 1623, 2036, 2353
Cfr13I GGNCC 9 cut(s) 343, 857, 1240, 1369, 1370, 1592, 1593, 2005, 2474
CseI GACGC 1 cut(s) 1556
Csp6I GTAC 4 cut(s) 662, 1160, 1839, 2707
CviQI GTAC 4 cut(s) 662, 1160, 1839, 2707
DpnI GATC 8 cut(s) 258, 492, 507, 525, 715, 1447, 1470, 1497
DpnII GATC 8 cut(s) 256, 490, 505, 523, 713, 1445, 1468, 1495
EaeI YGGCCR 4 cut(s) 33, 635, 1091, 1903
Eam1104I CTCTTC 2 cut(s) 117, 844
EarI CTCTTC 2 cut(s) 117, 844
Ecl136II GAGCTC 1 cut(s) 1311
Eco130I CCWWGG 2 cut(s) 1516, 1861
Eco147I AGGCCT 1 cut(s) 132
Eco24I GRGCYC 3 cut(s) 1313, 1373, 1596
Eco31I GGTCTC 1 cut(s) 2555
Eco32I GATATC 1 cut(s) 2325
Eco47I GGWCC 4 cut(s) 343, 857, 2005, 2474
Eco53kI GAGCTC 1 cut(s) 1311
Eco57I CTGAAG 2 cut(s) 659, 2289
Eco81I CCTNAGG 1 cut(s) 1759
Eco88I CYCGRG 3 cut(s) 1049, 1163, 1879
EcoICRI GAGCTC 1 cut(s) 1311
EcoO109I RGGNCCY 2 cut(s) 857, 1593
EcoRI GAATTC 3 cut(s) 1213, 1776, 2406
EcoRII CCWGG 6 cut(s) 30, 1136, 1208, 2497, 2559, 2664
EcoRV GATATC 1 cut(s) 2325
EcoT14I CCWWGG 2 cut(s) 1516, 1861
EcoT22I ATGCAT 1 cut(s) 6
EcoT38I GRGCYC 3 cut(s) 1313, 1373, 1596
ErhI CCWWGG 2 cut(s) 1516, 1861
Esp3I CGTCTC 1 cut(s) 1574
FaqI GGGAC 4 cut(s) 548, 843, 2094, 2741
Fnu4HI GCNGC 6 cut(s) 184, 814, 961, 1989, 2617, 2703
FokI GGATG 4 cut(s) 848, 1615, 1702, 2620
FriOI GRGCYC 3 cut(s) 1313, 1373, 1596
Fsp4HI GCNGC 6 cut(s) 184, 814, 961, 1989, 2617, 2703
FspBI CTAG 9 cut(s) 236, 249, 893, 902, 1185, 1341, 1434, 1985, 2241
GluI GCNGC 6 cut(s) 184, 814, 961, 1989, 2617, 2703
GsaI CCCAGC 3 cut(s) 1370, 1376, 2588
GsuI CTGGAG 1 cut(s) 1192
HaeIII GGCC 8 cut(s) 35, 132, 637, 1093, 1241, 1371, 1594, 1905
HapII CCGG 1 cut(s) 684
HgaI GACGC 1 cut(s) 1556
HincII GTYRAC 2 cut(s) 975, 1858
HindII GTYRAC 2 cut(s) 975, 1858
HindIII AAGCTT 2 cut(s) 943, 2261
HpaII CCGG 1 cut(s) 684
HphI GGTGA 2 cut(s) 308, 1936
Hpy166II GTNNAC 6 cut(s) 975, 1265, 1793, 1858, 2474, 2624
Hpy188I TCNGA 6 cut(s) 553, 766, 1000, 1315, 2232, 2660
Hpy8I GTNNAC 6 cut(s) 975, 1265, 1793, 1858, 2474, 2624
HpyAV CCTTC 7 cut(s) 318, 704, 848, 920, 1424, 1833, 1978
HpyCH4III ACNGT 5 cut(s) 661, 1269, 1838, 1941, 2512
HpyCH4IV ACGT 1 cut(s) 1105
HpyF10VI GCNNNNNNNGC 3 cut(s) 1761, 2348, 2711
HpySE526I ACGT 1 cut(s) 1105
Kzo9I GATC 8 cut(s) 256, 490, 505, 523, 713, 1445, 1468, 1495
LguI GCTCTTC 1 cut(s) 117
LmnI GCTCC 3 cut(s) 77, 1630, 1760
Lsp1109I GCAGC 5 cut(s) 170, 825, 972, 1975, 2714
LweI GCATC 2 cut(s) 1680, 2428
MaeI CTAG 9 cut(s) 236, 249, 893, 902, 1185, 1341, 1434, 1985, 2241
MaeII ACGT 1 cut(s) 1105
MaeIII GTNAC 6 cut(s) 689, 895, 909, 1065, 2279, 2593
MalI GATC 8 cut(s) 258, 492, 507, 525, 715, 1447, 1470, 1497
MboI GATC 8 cut(s) 256, 490, 505, 523, 713, 1445, 1468, 1495
MfeI CAATTG 2 cut(s) 404, 992
MflI RGATCY 2 cut(s) 1468, 1495
MhlI GDGCHC 3 cut(s) 1313, 1373, 1596
MlsI TGGCCA 4 cut(s) 35, 637, 1093, 1905
MluNI TGGCCA 4 cut(s) 35, 637, 1093, 1905
MlyI GAGTC 5 cut(s) 409, 977, 1007, 1285, 1349
MmeI TCCRAC 7 cut(s) 46, 99, 522, 772, 867, 1667, 1695
Mox20I TGGCCA 4 cut(s) 35, 637, 1093, 1905
Mph1103I ATGCAT 1 cut(s) 6
MroXI GAANNNNTTC 1 cut(s) 1546
MscI TGGCCA 4 cut(s) 35, 637, 1093, 1905
MslI CAYNNNNRTG 1 cut(s) 881
Msp20I TGGCCA 4 cut(s) 35, 637, 1093, 1905
MspA1I CMGCKG 1 cut(s) 2482
MspCI CTTAAG 2 cut(s) 979, 2630
MspI CCGG 1 cut(s) 684
MspR9I CCNGG 7 cut(s) 32, 685, 1138, 1210, 2499, 2561, 2666
MunI CAATTG 2 cut(s) 404, 992
MvaI CCWGG 6 cut(s) 32, 1138, 1210, 2499, 2561, 2666
MwoI GCNNNNNNNGC 3 cut(s) 1761, 2348, 2711
NciI CCSGG 1 cut(s) 685
NcoI CCATGG 1 cut(s) 1516
NdeII GATC 8 cut(s) 256, 490, 505, 523, 713, 1445, 1468, 1495
NlaIV GGNNCC 4 cut(s) 859, 1371, 1594, 1595
NmuCI GTSAC 2 cut(s) 909, 2593
NsiI ATGCAT 1 cut(s) 6
NspI RCATGY 4 cut(s) 207, 604, 886, 1585
NspV TTCGAA 1 cut(s) 1550
PaeI GCATGC 2 cut(s) 207, 886
PaeR7I CTCGAG 1 cut(s) 1049
PaqCI CACCTGC 1 cut(s) 416
PceI AGGCCT 1 cut(s) 132
PciI ACATGT 2 cut(s) 600, 1581
PciSI GCTCTTC 1 cut(s) 117
PdmI GAANNNNTTC 1 cut(s) 1546
PflMI CCANNNNNTGG 1 cut(s) 2504
PfoI TCCNGGA 4 cut(s) 1136, 1208, 2497, 2664
PkrI GCNGC 6 cut(s) 185, 815, 962, 1990, 2618, 2704
PleI GAGTC 5 cut(s) 408, 976, 1007, 1284, 1349
PpsI GAGTC 5 cut(s) 408, 976, 1007, 1284, 1349
PpuMI RGGWCCY 1 cut(s) 857
PscI ACATGT 2 cut(s) 600, 1581
PshBI ATTAAT 2 cut(s) 729, 1199
PsiI TTATAA 1 cut(s) 354
Psp124BI GAGCTC 1 cut(s) 1313
Psp1406I AACGTT 1 cut(s) 1105
Psp5II RGGWCCY 1 cut(s) 857
Psp6I CCWGG 6 cut(s) 30, 1136, 1208, 2497, 2559, 2664
PspFI CCCAGC 3 cut(s) 1366, 1372, 2584
PspGI CCWGG 6 cut(s) 30, 1136, 1208, 2497, 2559, 2664
PspN4I GGNNCC 4 cut(s) 859, 1371, 1594, 1595
PspOMI GGGCCC 2 cut(s) 1369, 1592
PspPI GGNCC 9 cut(s) 343, 857, 1240, 1369, 1370, 1592, 1593, 2005, 2474
PspPPI RGGWCCY 1 cut(s) 857
PsrI GAACNNNNNNTAC 2 cut(s) 888, 920
PsuI RGATCY 2 cut(s) 1468, 1495
RsaI GTAC 4 cut(s) 663, 1161, 1840, 2708
RsaNI GTAC 4 cut(s) 662, 1160, 1839, 2707
RseI CAYNNNNRTG 1 cut(s) 881
SacI GAGCTC 1 cut(s) 1313
SapI GCTCTTC 1 cut(s) 117
SatI GCNGC 6 cut(s) 184, 814, 961, 1989, 2617, 2703
Sau3AI GATC 8 cut(s) 256, 490, 505, 523, 713, 1445, 1468, 1495
Sau96I GGNCC 9 cut(s) 343, 857, 1240, 1369, 1370, 1592, 1593, 2005, 2474
SchI GAGTC 5 cut(s) 409, 977, 1007, 1285, 1349
ScrFI CCNGG 7 cut(s) 32, 685, 1138, 1210, 2499, 2561, 2666
SduI GDGCHC 3 cut(s) 1313, 1373, 1596
SfaNI GCATC 2 cut(s) 1680, 2428
SfcI CTRYAG 1 cut(s) 1769
Sfr274I CTCGAG 1 cut(s) 1049
SfuI TTCGAA 1 cut(s) 1550
SinI GGWCC 4 cut(s) 343, 857, 2005, 2474
SlaI CTCGAG 1 cut(s) 1049
SmiMI CAYNNNNRTG 1 cut(s) 881
SmlI CTYRAG 5 cut(s) 560, 586, 979, 1049, 2630
SmoI CTYRAG 5 cut(s) 560, 586, 979, 1049, 2630
SpeI ACTAGT 2 cut(s) 901, 1340
SphI GCATGC 2 cut(s) 207, 886
SseBI AGGCCT 1 cut(s) 132
SsiI CCGC 5 cut(s) 2061, 2195, 2480, 2616, 2700
SspI AATATT 4 cut(s) 789, 1703, 2023, 2140
SspMI CTAG 9 cut(s) 236, 249, 893, 902, 1185, 1341, 1434, 1985, 2241
SstI GAGCTC 1 cut(s) 1313
StuI AGGCCT 1 cut(s) 132
StyD4I CCNGG 7 cut(s) 30, 683, 1136, 1208, 2497, 2559, 2664
StyI CCWWGG 2 cut(s) 1516, 1861
TaaI ACNGT 5 cut(s) 661, 1269, 1838, 1941, 2512
TaiI ACGT 1 cut(s) 1108
TaqI TCGA 3 cut(s) 1050, 1550, 1574
TatI WGTACW 1 cut(s) 661
TauI GCSGC 1 cut(s) 2619
TscAI CASTG 6 cut(s) 445, 664, 1623, 2581, 2586, 2602
TseFI GTSAC 2 cut(s) 909, 2593
TseI GCWGC 5 cut(s) 183, 813, 960, 1988, 2702
Tsp45I GTSAC 2 cut(s) 909, 2593
TspDTI ATGAA 5 cut(s) 376, 821, 1520, 1812, 1985
TspGWI ACGGA 2 cut(s) 273, 928
TspRI CASTG 6 cut(s) 445, 664, 1623, 2581, 2586, 2602
Van91I CCANNNNNTGG 1 cut(s) 2504
Vha464I CTTAAG 2 cut(s) 979, 2630
VpaK11BI GGWCC 4 cut(s) 343, 857, 2005, 2474
VspI ATTAAT 2 cut(s) 729, 1199
XapI RAATTY 6 cut(s) 1213, 1776, 1918, 2190, 2334, 2406
XbaI TCTAGA 2 cut(s) 235, 2240
XceI RCATGY 4 cut(s) 207, 604, 886, 1585
XcmI CCANNNNNNNNNTGG 1 cut(s) 1999
XhoI CTCGAG 1 cut(s) 1049
XmnI GAANNNNTTC 1 cut(s) 1546
XspI CTAG 9 cut(s) 236, 249, 893, 902, 1185, 1341, 1434, 1985, 2241
Zsp2I ATGCAT 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.