FvH4_7g14110

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
Physical Location & Seq
Reverse (-)
12520388 .. 12525136
4749 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g14110.t1

Sequence Viewer

Length: 2829 bp
ATGATTTGCATGCAAAGGGAGTATTCAATTCTGAGAAATAAACACACAGCCAAACTTATAAATAGTAGATTGCAGTGCAATTGTGCTTCTGCTTCCCTCATCGGCTTGATTACATCAATTAAGATGGAGTTGGGAAGGTGGCTCATACATGCCTTTACAATATCAATTGTGCTTCTTCTGCATATCAACGCTTCCGCCTTATCCCTCGTCCATCACCATGCTAACGTGACGGCGAGGTGCATTGACAGGGAGAGGGACGCACTCCTTGCTATCATAGGAGACCTGGTAGATGAATACAACCTGCTCTCTTCGTGGGGAAGCGAAGACTGTTGCAGATGGGAAAGAGTCCATTGTGATCCCCACACTGGCCATGTTATTCAACTTCATCTTGGAGGAGTGTTTGAGTTGTTGCAACATGGACTTGATCGACTGGAGATGTACCCACAGATGTACTTTCTGGGGTTATTTTATCAGCAAGGTCAGGATATATTGAAAAACTTCGGAGGTCAGGTTAGTCCTAAAATCATTGAGTTGCAGTATTTGGAATATTTGGACCTCAGTCACAATTCCTTCAATGCCACCCAAATTCCAGCACTCATTTGTTCTCTTTCCAGTTTAAGACACCTAGATCTCCATTCCAATCCCCACATCGGGAGCAAAATTCCAAAGCTTATTGGTAATCTGACCAATTTAAGGTATCTAGATCTCTCTAATATTGGCTTCAGTGGTGAAATTCCAACGCCGATGTGTTCTCTGTCTAATTTAAGACACCTAGATCTCGGTTACAATGATCTCAACGGGAGCAATATTCTAGAGCTCATTGGTAATCTGACCAATGTAAGATATCTAGATCTCTCTTTGAATTCCTTGGGTGATAAAATTCCAGTTGCATATCATCAACTTGGAAACCTTACTCACTTGCAATATCTCAATCTCGGATATAATTACCACACTCATGTTGTAGAAAACCTCAATTGGCTCCCACATCTTTCTTCTTTGAAATACCTAGACTTGAGTGGGACCAATCTGAGTAAGGCACGCGGGTATAATTCTAGTCTAAAAAACTTGACACTGCCATATTGTGATCTTCCTCCTCCAATTCTTTCCACTCTATCTCACATCAATTCTTCCAAGTCTCTTGTTAGTGTTGACTTGTCTGATAATATTGTCACTTCTTCAATATTCAAATGGTTATGCAACTACAATACCACCCTTGCATATCTTGACCTTCATTTCACTCAATTAAGTGGTTTGATTCCTGATGTTTTCAGAAACATGAGATCACTGAAAAGTCTTTACCTCTCTTTCAACCAATTAAGTGGTTTGAATCCCAATGCTTTCTCAAACATGAGCTCACTTGCAAATCTTGCCCTCTCTTCCAACCGATTAAGTGGTTTGAATCCCAATGCTTTCTCAAACATGAGCTCACTTGCATATCTTGGCTTCTCTTCCAACCGATTAAGTGGTTTGAATCCCAATGCTTTCTCAAACATGAGCTCACTTGCATATCTTGACCTCTCTTCGAACCGATTAAGTGGTTTGAATCCCAATGCTTTCTCAAACATGAGCTCACTTGCATATCTTGACCTCTCTTCGAACCGATTAAGTGGTTTGAATCCCAATGCTTTCTCAAACATGAGCTCACTTGCATATCTTGACCTCTCTTCCAACCGATTAAGTGGTTTGAATCCCAATGTTTTTGCAAACATGAACTCACTAGAAATTCTTGTCCTCTCTTCCAACCGATTAAGCGGTTTGAATTCCAATGTTTTCGCAAACATGAGCTCACTTGCATATCTTTCCCTCTCTGATAACTCACTTGAAGGAGAGATCCCAACATCCATTGCCCAGTTATGCAGTTTGCAACATCTATTCATGTCAGGTTGTAATCTGACTGGACAACTTTCTGAGTTCGTTCAAAGATGGTCCACATGTCCTCAGAACCCAATCCAGTCTTTATATCTTCATAATAATGATCTTGTTGGGTCATTTCCTGATTTTACAAACTTTTCATCATTGGAGAGCTTAGATCTCTCTGGAAATAAGTTGAGCGGAATGGTTCCGGATAGTATTGGAAAGTTGTCTTCTTTGACATACTTATCTGTCGATGAAAACCAATTAAGATGGACCATACCTGAAAGTATTGGGGAACTATCCCGTTTATATTACTTGAGTCTCTCAGGAAATCTTCTAAGCGGAAGAATTCCAGAAAGTATTGGGAAACTCTCATCATTGGCCCATTTAGATCTTTCAAAAAATCAGTTAAGCGGAAGAATACCAGAACAAATTGGGAAAATATCATCGTTGGAAAGCTTAGATCTCTCTAGAAATTGGTTAAGGGAAAGAATACCTCAAAGTATTGGGCAGTTGTCAAGTTTGAACTCTATAAATCTTAGTGTGAATCATTTGGAAGGAGAGATTTCAGAAATTCATGTCTCAAAACTCTCCGTTTTAGGTTCCTTGGATTTATCCTATAACTCAAGACTAGAATTCAATGTCACTTCTGATTGGATTCCTCCTTTTAATTTGTCTCATCTGAGTTTGAGGTTTTGTAAGGTGGGGCCAAATTTCCCAAAATGGCTCCAAACCCAAAAAGGTCTTTTTGACATCGACATGTCTTATACTGACATTTTAGATGTCCTTCCAAGTTGGTTCTGGGGTGTCTTTGGTGACACTCGAACTATAGATTTCTCTAACAATCAAATCAGAGGAGCATTAGGGAGTTCAAAGATTGTATCATTTAGTGGATTTGAAGTTCGAATTAGTTCAAACCGATTGGACGGTCTAGTACCCTCATTTCTATCAAATGCTTCATATTTGGATCTCTGA

Protein Analysis

943

Amino Acids

104.48

Weight (kDa)

6.23

Isoelectric Point (pI)

35.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 82 - 119 1.4e-07 Leucine rich repeat N-terminal domain
LRR_14 PF23598 138 - 286 3.3e-12 Leucine-rich repeat region
LRR_8 PF13855 379 - 439 8.5e-07 Leucine rich repeat
LRR_8 PF13855 404 - 463 4.6e-13 Leucine rich repeat
LRR_5 PF13306 421 - 533 1.4e-11 BspA type Leucine rich repeat region (6 copies)
LRR_8 PF13855 427 - 487 1.4e-13 Leucine rich repeat
LRR_8 PF13855 452 - 511 4.2e-15 Leucine rich repeat
LRR_8 PF13855 477 - 535 2.2e-15 Leucine rich repeat
LRR_14 PF23598 489 - 676 3.1e-09 Leucine-rich repeat region
LRR_5 PF13306 492 - 605 2.5e-11 BspA type Leucine rich repeat region (6 copies)
LRR_8 PF13855 500 - 559 1.1e-17 Leucine rich repeat
LRR_8 PF13855 524 - 583 3.8e-16 Leucine rich repeat
LRR_8 PF13855 572 - 631 5.6e-11 Leucine rich repeat
LRR_8 PF13855 650 - 707 8.5e-09 Leucine rich repeat
LRR_14 PF23598 662 - 863 4.1e-21 Leucine-rich repeat region
LRR_8 PF13855 720 - 777 3.8e-08 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000028)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g45420 FvH4_4g14031 FvH4_5g20780 FvH4_6g28530 FvH4_7g14020 FvH4_7g14030 FvH4_7g14040 FvH4_7g14050 FvH4_7g14060 FvH4_7g14070 FvH4_7g14090 FvH4_7g14110 FvH4_7g14140 FvH4_7g14450
malus_domestica MD00G1189100.v1.1 MD01G1018600.v1.1 MD01G1053800.v1.1 MD01G1053900.v1.1 MD01G1054000.v1.1 MD01G1054100.v1.1 MD01G1056700.v1.1 MD01G1057000.v1.1 MD01G1057300.v1.1 MD01G1057400.v1.1 MD01G1061600.v1.1 MD01G1061800.v1.1 MD01G1061900.v1.1 MD01G1062000.v1.1 MD01G1062400.v1.1 MD01G1062500.v1.1 MD01G1063200.v1.1 MD01G1063300.v1.1 MD01G1063400.v1.1 MD01G1063700.v1.1 MD01G1063900.v1.1 MD01G1064200.v1.1 MD01G1064300.v1.1 MD01G1064400.v1.1 MD01G1064600.v1.1 MD01G1064700.v1.1 MD01G1181100.v1.1 MD01G1212300.v1.1 MD01G1212500.v1.1 MD01G1212600.v1.1 MD02G1271900.v1.1 MD07G1136500.v1.1 MD07G1139300.v1.1 MD07G1141200.v1.1 MD07G1144700.v1.1 MD08G1144200.v1.1 MD14G1186300.v1.1 MD14G1186500.v1.1 MD14G1186700.v1.1 MD14G1186800.v1.1 MD15G1351300.v1.1 MD15G1439500.v1.1
prunus_persica Prupe.1G067000_v2.0.a1 Prupe.2G077400_v2.0.a1 Prupe.2G077700_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078600_v2.0.a1 Prupe.2G078800_v2.0.a1 Prupe.2G099600_v2.0.a1 Prupe.2G099700_v2.0.a1 Prupe.2G155100_v2.0.a1 Prupe.2G155500_v2.0.a1 Prupe.2G155600_v2.0.a1 Prupe.2G155800_v2.0.a1 Prupe.2G155900_v2.0.a1 Prupe.2G156100_v2.0.a1 Prupe.2G166100_v2.0.a1 Prupe.2G166300_v2.0.a1 Prupe.2G167500_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G168400_v2.0.a1 Prupe.2G168700_v2.0.a1 Prupe.2G168800_v2.0.a1 Prupe.2G169000_v2.0.a1 Prupe.2G169100_v2.0.a1 Prupe.2G169200_v2.0.a1 Prupe.2G169500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G172300_v2.0.a1 Prupe.2G304800_v2.0.a1 Prupe.4G264800_v2.0.a1 Prupe.4G265000_v2.0.a1 Prupe.5G051900_v2.0.a1 Prupe.5G052000_v2.0.a1
pyrus_communis pycom01g08380 pycom01g08430 pycom01g08490 pycom01g08520 pycom01g08540 pycom01g08550 pycom01g08600 pycom01g08630 pycom01g08660 pycom01g08720 pycom01g09180 pycom01g09200 pycom01g09210 pycom01g09270 pycom01g09280 pycom01g09300 pycom01g09380 pycom01g19110 pycom01g22260 pycom01g22310 pycom01g22330 pycom01g22350 pycom01g22360 pycom02g23250 pycom07g13420 pycom07g13670 pycom07g13900 pycom07g13910 pycom07g13960 pycom07g13970 pycom07g25680 pycom11g22830
rosa_chinensis RchiOBHm_Chr0c22g0500431 RchiOBHm_Chr0c22g0500441 RchiOBHm_Chr0c22g0500561 RchiOBHm_Chr0c22g0500571 RchiOBHm_Chr0c22g0500611 RchiOBHm_Chr0c22g0500621 RchiOBHm_Chr0c22g0500631 RchiOBHm_Chr0c22g0500681 RchiOBHm_Chr1g0348221 RchiOBHm_Chr1g0348251 RchiOBHm_Chr1g0352861 RchiOBHm_Chr1g0352871 RchiOBHm_Chr1g0352891 RchiOBHm_Chr1g0352901 RchiOBHm_Chr1g0354671 RchiOBHm_Chr1g0354701 RchiOBHm_Chr1g0354711 RchiOBHm_Chr1g0354751 RchiOBHm_Chr1g0354761 RchiOBHm_Chr1g0354841 RchiOBHm_Chr1g0354851 RchiOBHm_Chr1g0354881 RchiOBHm_Chr1g0354971 RchiOBHm_Chr1g0354981 RchiOBHm_Chr1g0354991 RchiOBHm_Chr1g0355001 RchiOBHm_Chr1g0355011 RchiOBHm_Chr1g0355021 RchiOBHm_Chr1g0355861 RchiOBHm_Chr1g0379671 RchiOBHm_Chr1g0379681 RchiOBHm_Chr2g0096591 RchiOBHm_Chr2g0132821 RchiOBHm_Chr3g0454901 RchiOBHm_Chr3g0472711 RchiOBHm_Chr4g0400791 RchiOBHm_Chr5g0069481 RchiOBHm_Chr5g0069511 RchiOBHm_Chr5g0069551 RchiOBHm_Chr6g0254651 RchiOBHm_Chr6g0259721 RchiOBHm_Chr7g0205911 RchiOBHm_Chr7g0206401 RchiOBHm_Chr7g0206571 RchiOBHm_Chr7g0206581 RchiOBHm_Chr7g0206621 RchiOBHm_Chr7g0206631 RchiOBHm_Chr7g0206641 RchiOBHm_Chr7g0206681 RchiOBHm_Chr7g0206691 RchiOBHm_Chr7g0206751 RchiOBHm_Chr7g0206761 RchiOBHm_Chr7g0206851 RchiOBHm_Chr7g0206911 RchiOBHm_Chr7g0206921 RchiOBHm_Chr7g0207001 RchiOBHm_Chr7g0207011 RchiOBHm_Chr7g0207031 RchiOBHm_Chr7g0207101 RchiOBHm_Chr7g0207161 RchiOBHm_Chr7g0207201 RchiOBHm_Chr7g0207271 RchiOBHm_Chr7g0207301 RchiOBHm_Chr7g0207311 RchiOBHm_Chr7g0207421 RchiOBHm_Chr7g0207481 RchiOBHm_Chr7g0207491 RchiOBHm_Chr7g0207501 RchiOBHm_Chr7g0207521 RchiOBHm_Chr7g0207531 RchiOBHm_Chr7g0207561 RchiOBHm_Chr7g0207571 RchiOBHm_Chr7g0207581 RchiOBHm_Chr7g0207601 RchiOBHm_Chr7g0207621 RchiOBHm_Chr7g0207631 RchiOBHm_Chr7g0207651 RchiOBHm_Chr7g0207661 RchiOBHm_Chr7g0207711 RchiOBHm_Chr7g0207761 RchiOBHm_Chr7g0207801 RchiOBHm_Chr7g0208821 RchiOBHm_Chr7g0208831 RchiOBHm_Chr7g0208841 RchiOBHm_Chr7g0213601 RchiOBHm_Chr7g0215981 RchiOBHm_Chr7g0216021
rosa_laevigata RLG00000003193 RLG00000003194 RLG00000003287 RLG00000003288 RLG00000003289 RLG00000003293 RLG00000003294 RLG00000003295 RLG00000003297 RLG00000003299 RLG00000003301 RLG00000003327 RLG00000003347 RLG00000016653 RLG00000018642 RLG00000018643 RLG00000019285 RLG00000022542 RLG00000026368 RLG00000026371 RLG00000028124 RLG00000028125 RLG00000028183 RLG00000028184 RLG00000028185 RLG00000028188 RLG00000028673 RLG00000029267 RLG00000029325 RLG00000029674 RLG00000032883 RLG00000036055 RLG00000036058 RLG00000036065 RLG00000036068 RLG00000036071 RLG00000036072 RLG00000036075 RLG00000036076
rosa_multiflora Rmu_co8250183.1_g000001 Rmu_co8271981.1_g000001 Rmu_co8410829.1_g000001 Rmu_co8432879.1_g000001 Rmu_co8441941.1_g000001 Rmu_sc0000076.1_g000031 Rmu_sc0000738.1_g000038 Rmu_sc0000848.1_g000003 Rmu_sc0000848.1_g000014 Rmu_sc0000848.1_g000015 Rmu_sc0000848.1_g000016 Rmu_sc0001264.1_g000001 Rmu_sc0002284.1_g000018 Rmu_sc0002356.1_g000011 Rmu_sc0003020.1_g000003 Rmu_sc0003115.1_g000001 Rmu_sc0003115.1_g000002 Rmu_sc0003115.1_g000003 Rmu_sc0003115.1_g000004 Rmu_sc0003115.1_g000005 Rmu_sc0003115.1_g000008 Rmu_sc0003115.1_g000010 Rmu_sc0003115.1_g000011 Rmu_sc0003115.1_g000014 Rmu_sc0003565.1_g000002 Rmu_sc0003652.1_g000013 Rmu_sc0003652.1_g000015 Rmu_sc0003652.1_g000016 Rmu_sc0003652.1_g000019 Rmu_sc0003940.1_g000001 Rmu_sc0003940.1_g000004 Rmu_sc0003940.1_g000009 Rmu_sc0004084.1_g000010 Rmu_sc0004705.1_g000021 Rmu_sc0004972.1_g000007 Rmu_sc0004987.1_g000002 Rmu_sc0004987.1_g000006 Rmu_sc0005065.1_g000018 Rmu_sc0005065.1_g000029 Rmu_sc0005391.1_g000002 Rmu_sc0005633.1_g000003 Rmu_sc0005633.1_g000008 Rmu_sc0006632.1_g000014 Rmu_sc0006632.1_g000018 Rmu_sc0006681.1_g000010 Rmu_sc0006681.1_g000011 Rmu_sc0006733.1_g000003 Rmu_sc0007385.1_g000005 Rmu_sc0007385.1_g000007 Rmu_sc0007385.1_g000009 Rmu_sc0007385.1_g000016 Rmu_sc0007645.1_g000002 Rmu_sc0007645.1_g000003 Rmu_sc0007645.1_g000022 Rmu_sc0007828.1_g000008 Rmu_sc0008509.1_g000003 Rmu_sc0008509.1_g000015 Rmu_sc0008509.1_g000016 Rmu_sc0008509.1_g000020 Rmu_sc0008509.1_g000030 Rmu_sc0008509.1_g000041 Rmu_sc0008756.1_g000001 Rmu_sc0008756.1_g000003 Rmu_sc0013028.1_g000002 Rmu_sc0013028.1_g000003 Rmu_sc0013028.1_g000005 Rmu_sc0013160.1_g000001 Rmu_sc0014454.1_g000009 Rmu_sc0014455.1_g000007 Rmu_sc0014659.1_g000004 Rmu_sc0017798.1_g000002 Rmu_sc0017798.1_g000004 Rmu_sc0029608.1_g000001 Rmu_sc0037861.1_g000001 Rmu_sc0038750.1_g000001 Rmu_sc0042995.1_g000001 Rmu_ssc0000161.1_g000017
rosa_roxburghii Rroxscaffold_1G00009180 Rroxscaffold_1G00009190 Rroxscaffold_1G00011450 Rroxscaffold_1G00011480 Rroxscaffold_2G00111660 Rroxscaffold_2G00113570 Rroxscaffold_2G00122140 Rroxscaffold_3G00243730 Rroxscaffold_3G00245750 Rroxscaffold_3G00245760 Rroxscaffold_3G00250220 Rroxscaffold_3G00251160 Rroxscaffold_3G00251270 Rroxscaffold_3G00251280 Rroxscaffold_3G00251300 Rroxscaffold_3G00251340 Rroxscaffold_3G00251350 Rroxscaffold_3G00251390 Rroxscaffold_3G00251400 Rroxscaffold_3G00251560 Rroxscaffold_3G00251570 Rroxscaffold_3G00251870 Rroxscaffold_3G00252200 Rroxscaffold_3G00252210 Rroxscaffold_4G00279970 Rroxscaffold_4G00299970 Rroxscaffold_4G00300760 Rroxscaffold_4G00300780 Rroxscaffold_4G00300810 Rroxscaffold_4G00300850 Rroxscaffold_4G00307080 Rroxscaffold_4G00307100 Rroxscaffold_4G00313990 Rroxscaffold_6G00405080
rosa_rugosa Rorug01G0193600 Rorug01G0193700 Rorug01G0243800 Rorug01G0244000 Rorug01G0244000 Rorug01G0244400 Rorug01G0414300.1 Rorug01G0414500 Rorug01G0414600 Rorug02G0235600 Rorug02G0307900 Rorug02G0583100 Rorug02G0583200 Rorug02G0583300 Rorug05G0398000 Rorug05G0398100 Rorug05G0398200 Rorug05G0580300 Rorug05G0590300 Rorug06G0116000 Rorug06G0116100 Rorug07G0096800 Rorug07G0097100.1 Rorug07G0097200 Rorug07G0098600 Rorug07G0098600 Rorug07G0098700 Rorug07G0099100 Rorug07G0106100 Rorug07G0106200 Rorug07G0106200 Rorug07G0106300 Rorug07G0157600 Rorug07G0157700 Rorug07G0157700 Rorug07G0157800
rosa_samantha Rh1AG255500 Rh1AG256700 Rh1BG225800 Rh1BG226200 Rh1BG230000 Rh1CG195300 Rh1CG238400 Rh1CG238500 Rh1CG238900 Rh1CG239000 Rh1CG239300 Rh1CG239400 Rh1CG239800 Rh1CG240000 Rh1CG240200 Rh1CG240300 Rh1CG244300 Rh1CG406900 Rh1CG407300 Rh1CG407400 Rh2CG343600 Rh2DG383200 Rh3BG205900 Rh4AG404400 Rh4BG415500 Rh5AG455200 Rh5AG455600 Rh5CG497000 Rh5CG497200 Rh7AG228800 Rh7AG230400 Rh7AG230800 Rh7AG231200 Rh7AG231600 Rh7AG231800 Rh7AG232100 Rh7AG241600 Rh7BG236200 Rh7CG238200 Rh7CG239100 Rh7CG243400 Rh7CG244900
rosa_wichuraiana Rw0G023040 Rw1G017780 Rw1G022320 Rw1G022340 Rw1G022410 Rw1G022420 Rw1G022440 Rw1G022460 Rw1G022490 Rw1G022500 Rw1G022530 Rw1G022550 Rw1G022560 Rw1G022600 Rw1G023060 Rw1G038150 Rw1G038160 Rw2G008210 Rw2G022350 Rw2G029290 Rw4G015050 Rw4G019850 Rw5G024060 Rw5G042460 Rw7G019160 Rw7G019460 Rw7G019690 Rw7G019830 Rw7G019860 Rw7G019880 Rw7G019890 Rw7G019930 Rw7G019990 Rw7G020460 Rw7G025100 Rw7G025120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 59
Acc36I ACCTGC 1 cut(s) 309
AccBSI CCGCTC 1 cut(s) 2052
AccII CGCG 1 cut(s) 1041
AccIII TCCGGA 1 cut(s) 2062
AciI CCGC 6 cut(s) 195, 1041, 1752, 2052, 2196, 2268
AclWI GGATC 2 cut(s) 350, 1825
AcoI YGGCCR 1 cut(s) 367
AcuI CTGAAG 1 cut(s) 706
AfaI GTAC 3 cut(s) 440, 452, 2790
AfiI CCNNNNNNNGG 4 cut(s) 365, 650, 651, 693
AflIII ACRYGT 2 cut(s) 1931, 2613
AjnI CCWGG 1 cut(s) 282
AloI GAACNNNNNNTCC 2 cut(s) 2739, 2771
Alw21I GWGCWC 7 cut(s) 819, 1355, 1427, 1499, 1571, 1643, 1787
Alw26I GTCTC 5 cut(s) 273, 1140, 2180, 2440, 2535
AlwI GGATC 2 cut(s) 350, 1825
Aor13HI TCCGGA 1 cut(s) 2062
AoxI GGCC 3 cut(s) 367, 2235, 2561
Asp700I GAANNNNTTC 2 cut(s) 497, 2764
AspS9I GGNCC 6 cut(s) 553, 1020, 1926, 2127, 2236, 2561
AsuHPI GGTGA 4 cut(s) 206, 740, 884, 2681
AsuII TTCGAA 3 cut(s) 1523, 1595, 2758
AvaII GGWCC 4 cut(s) 553, 1020, 1926, 2127
BalI TGGCCA 1 cut(s) 369
BanII GRGCYC 7 cut(s) 819, 1355, 1427, 1499, 1571, 1643, 1787
BbsI GAAGAC 2 cut(s) 330, 2076
Bbv12I GWGCWC 7 cut(s) 819, 1355, 1427, 1499, 1571, 1643, 1787
BccI CCATC 5 cut(s) 118, 219, 330, 1917, 2118
BceAI ACGGC 1 cut(s) 246
BciT130I CCWGG 1 cut(s) 284
BcoDI GTCTC 5 cut(s) 273, 1140, 2180, 2440, 2535
BfmI CTRYAG 1 cut(s) 2682
BfuAI ACCTGC 1 cut(s) 309
BglII AGATCT 7 cut(s) 628, 703, 775, 850, 2029, 2245, 2317
Bme1390I CCNGG 1 cut(s) 284
Bme18I GGWCC 4 cut(s) 553, 1020, 1926, 2127
BmgT120I GGNCC 6 cut(s) 553, 1020, 1926, 2127, 2236, 2561
BmiI GGNNCC 6 cut(s) 980, 1021, 2061, 2458, 2562, 2582
BmrFI CCNGG 1 cut(s) 284
BmrI ACTGGG 1 cut(s) 1843
BmuI ACTGGG 1 cut(s) 1843
BoxI GACNNNNGTC 1 cut(s) 558
BpiI GAAGAC 2 cut(s) 330, 2076
BpmI CTGGAG 1 cut(s) 452
Bpu14I TTCGAA 3 cut(s) 1523, 1595, 2758
BpuEI CTTGAG 3 cut(s) 1033, 2191, 2464
BsaI GGTCTC 1 cut(s) 273
BsaJI CCNNGG 2 cut(s) 867, 2460
BsaWI WCCGGW 1 cut(s) 2062
BsaXI ACNNNNNCTCC 4 cut(s) 270, 300, 495, 525
Bsc4I CCNNNNNNNGG 4 cut(s) 365, 650, 651, 693
Bse1I ACTGG 7 cut(s) 370, 435, 612, 884, 1849, 1900, 1951
Bse3DI GCAATG 1 cut(s) 1842
BseAI TCCGGA 1 cut(s) 2062
BseBI CCWGG 1 cut(s) 284
BseDI CCNNGG 2 cut(s) 867, 2460
BseGI GGATG 1 cut(s) 1838
BseLI CCNNNNNNNGG 4 cut(s) 365, 650, 651, 693
BseMI GCAATG 1 cut(s) 1842
BseMII CTCAG 7 cut(s) 23, 571, 1019, 1899, 1952, 2193, 2528
BseNI ACTGG 7 cut(s) 370, 435, 612, 884, 1849, 1900, 1951
BseRI GAGGAG 3 cut(s) 408, 1083, 2724
Bsh1236I CGCG 1 cut(s) 1041
BshFI GGCC 3 cut(s) 369, 2237, 2563
BsiHKAI GWGCWC 7 cut(s) 819, 1355, 1427, 1499, 1571, 1643, 1787
BsiSI CCGG 1 cut(s) 2063
BslFI GGGAC 2 cut(s) 269, 1033
BslI CCNNNNNNNGG 4 cut(s) 365, 650, 651, 693
BsmAI GTCTC 5 cut(s) 273, 1140, 2180, 2440, 2535
BsmFI GGGAC 2 cut(s) 269, 1033
BsnI GGCC 3 cut(s) 369, 2237, 2563
Bso31I GGTCTC 1 cut(s) 273
Bsp119I TTCGAA 3 cut(s) 1523, 1595, 2758
Bsp1286I GDGCHC 7 cut(s) 819, 1355, 1427, 1499, 1571, 1643, 1787
Bsp13I TCCGGA 1 cut(s) 2062
BspACI CCGC 6 cut(s) 195, 1041, 1752, 2052, 2196, 2268
BspANI GGCC 3 cut(s) 369, 2237, 2563
BspCNI CTCAG 7 cut(s) 24, 570, 1020, 1900, 1951, 2192, 2529
BspEI TCCGGA 1 cut(s) 2062
BspFNI CGCG 1 cut(s) 1041
BspLI GGNNCC 6 cut(s) 980, 1021, 2061, 2458, 2562, 2582
BspMI ACCTGC 1 cut(s) 309
BspPI GGATC 2 cut(s) 350, 1825
BspT104I TTCGAA 3 cut(s) 1523, 1595, 2758
BspTNI GGTCTC 1 cut(s) 273
BsrBI CCGCTC 1 cut(s) 2052
BsrDI GCAATG 1 cut(s) 1842
BsrI ACTGG 7 cut(s) 370, 435, 612, 884, 1849, 1900, 1951
BssECI CCNNGG 2 cut(s) 867, 2460
BssT1I CCWWGG 2 cut(s) 867, 2460
Bst2UI CCWGG 1 cut(s) 284
Bst4CI ACNGT 2 cut(s) 329, 2783
Bst6I CTCTTC 7 cut(s) 313, 1381, 1453, 1525, 1597, 1669, 1741
BstAPI GCANNNNNTGC 2 cut(s) 266, 1367
BstBI TTCGAA 3 cut(s) 1523, 1595, 2758
BstC8I GCNNGC 2 cut(s) 11, 1039
BstF5I GGATG 1 cut(s) 1838
BstFNI CGCG 1 cut(s) 1041
BstMAI GTCTC 5 cut(s) 273, 1140, 2180, 2440, 2535
BstMWI GCNNNNNNNGC 3 cut(s) 178, 266, 1367
BstNI CCWGG 1 cut(s) 284
BstNSI RCATGY 4 cut(s) 13, 152, 1935, 2617
BstPAI GACNNNNGTC 1 cut(s) 558
BstSCI CCNGG 1 cut(s) 282
BstSFI CTRYAG 1 cut(s) 2682
BstUI CGCG 1 cut(s) 1041
BstV2I GAAGAC 2 cut(s) 330, 2076
BstX2I RGATCY 9 cut(s) 628, 703, 775, 850, 1830, 2029, 2245, 2317, 2821
BstXI CCANNNNNNTGG 1 cut(s) 1319
BstYI RGATCY 9 cut(s) 628, 703, 775, 850, 1830, 2029, 2245, 2317, 2821
BsuRI GGCC 3 cut(s) 369, 2237, 2563
BtsCI GGATG 1 cut(s) 1838
BtsI GCAGTG 2 cut(s) 80, 1070
BtsIMutI CAGTG 5 cut(s) 80, 363, 730, 1070, 1283
BveI ACCTGC 1 cut(s) 309
Cac8I GCNNGC 2 cut(s) 11, 1039
Cfr13I GGNCC 6 cut(s) 553, 1020, 1926, 2127, 2236, 2561
CseI GACGC 1 cut(s) 266
CsiI ACCWGGT 1 cut(s) 282
Csp6I GTAC 3 cut(s) 439, 451, 2789
CviQI GTAC 3 cut(s) 439, 451, 2789
EaeI YGGCCR 1 cut(s) 367
Eam1104I CTCTTC 7 cut(s) 313, 1381, 1453, 1525, 1597, 1669, 1741
EarI CTCTTC 7 cut(s) 313, 1381, 1453, 1525, 1597, 1669, 1741
EciI GGCGGA 1 cut(s) 184
Ecl136II GAGCTC 7 cut(s) 817, 1353, 1425, 1497, 1569, 1641, 1785
Eco130I CCWWGG 2 cut(s) 867, 2460
Eco24I GRGCYC 7 cut(s) 819, 1355, 1427, 1499, 1571, 1643, 1787
Eco31I GGTCTC 1 cut(s) 273
Eco32I GATATC 1 cut(s) 845
Eco47I GGWCC 4 cut(s) 553, 1020, 1926, 2127
Eco53kI GAGCTC 7 cut(s) 817, 1353, 1425, 1497, 1569, 1641, 1785
Eco57I CTGAAG 1 cut(s) 706
EcoICRI GAGCTC 7 cut(s) 817, 1353, 1425, 1497, 1569, 1641, 1785
EcoRI GAATTC 4 cut(s) 862, 1759, 2202, 2489
EcoRII CCWGG 1 cut(s) 282
EcoRV GATATC 1 cut(s) 845
EcoT14I CCWWGG 2 cut(s) 867, 2460
EcoT38I GRGCYC 7 cut(s) 819, 1355, 1427, 1499, 1571, 1643, 1787
ErhI CCWWGG 2 cut(s) 867, 2460
FaqI GGGAC 2 cut(s) 269, 1033
FauI CCCGC 1 cut(s) 1034
FokI GGATG 1 cut(s) 1825
FriOI GRGCYC 7 cut(s) 819, 1355, 1427, 1499, 1571, 1643, 1787
GsuI CTGGAG 1 cut(s) 452
HaeIII GGCC 3 cut(s) 369, 2237, 2563
HapII CCGG 1 cut(s) 2063
HgaI GACGC 1 cut(s) 266
HincII GTYRAC 1 cut(s) 1150
HindII GTYRAC 1 cut(s) 1150
HindIII AAGCTT 2 cut(s) 668, 2311
HpaII CCGG 1 cut(s) 2063
HphI GGTGA 4 cut(s) 206, 740, 884, 2681
Hpy166II GTNNAC 2 cut(s) 1150, 1929
Hpy8I GTNNAC 2 cut(s) 1150, 1929
HpyAV CCTTC 6 cut(s) 129, 580, 1238, 1817, 2405, 2651
HpyCH4III ACNGT 2 cut(s) 329, 2783
HpyCH4IV ACGT 1 cut(s) 225
HpyF10VI GCNNNNNNNGC 3 cut(s) 178, 266, 1367
HpySE526I ACGT 1 cut(s) 225
Kpn2I TCCGGA 1 cut(s) 2062
LmnI GCTCC 5 cut(s) 654, 801, 984, 2586, 2711
MabI ACCWGGT 1 cut(s) 282
MaeII ACGT 1 cut(s) 225
MaeIII GTNAC 6 cut(s) 226, 560, 782, 1168, 2497, 2669
MbiI CCGCTC 1 cut(s) 2052
MfeI CAATTG 3 cut(s) 79, 165, 973
MflI RGATCY 9 cut(s) 628, 703, 775, 850, 1830, 2029, 2245, 2317, 2821
MhlI GDGCHC 7 cut(s) 819, 1355, 1427, 1499, 1571, 1643, 1787
MlsI TGGCCA 1 cut(s) 369
MluNI TGGCCA 1 cut(s) 369
MlyI GAGTC 2 cut(s) 354, 2182
MmeI TCCRAC 6 cut(s) 761, 1404, 1476, 1692, 1764, 2286
Mox20I TGGCCA 1 cut(s) 369
MroI TCCGGA 1 cut(s) 2062
MroXI GAANNNNTTC 2 cut(s) 497, 2764
MscI TGGCCA 1 cut(s) 369
MslI CAYNNNNRTG 4 cut(s) 216, 954, 1971, 2612
Msp20I TGGCCA 1 cut(s) 369
MspI CCGG 1 cut(s) 2063
MspR9I CCNGG 1 cut(s) 284
MunI CAATTG 3 cut(s) 79, 165, 973
MvaI CCWGG 1 cut(s) 284
MvnI CGCG 1 cut(s) 1041
MwoI GCNNNNNNNGC 3 cut(s) 178, 266, 1367
NlaIV GGNNCC 6 cut(s) 980, 1021, 2061, 2458, 2562, 2582
NmuCI GTSAC 5 cut(s) 226, 560, 1168, 2497, 2669
NspI RCATGY 4 cut(s) 13, 152, 1935, 2617
NspV TTCGAA 3 cut(s) 1523, 1595, 2758
PaeI GCATGC 1 cut(s) 13
PciI ACATGT 2 cut(s) 1931, 2613
PdmI GAANNNNTTC 2 cut(s) 497, 2764
PfeI GAWTC 9 cut(s) 1255, 1327, 1399, 1471, 1543, 1615, 1687, 2401, 2512
PleI GAGTC 2 cut(s) 353, 2181
PpsI GAGTC 2 cut(s) 353, 2181
PscI ACATGT 2 cut(s) 1931, 2613
PshAI GACNNNNGTC 1 cut(s) 558
PsiI TTATAA 1 cut(s) 59
Psp124BI GAGCTC 7 cut(s) 819, 1355, 1427, 1499, 1571, 1643, 1787
Psp6I CCWGG 1 cut(s) 282
PspGI CCWGG 1 cut(s) 282
PspN4I GGNNCC 6 cut(s) 980, 1021, 2061, 2458, 2562, 2582
PspPI GGNCC 6 cut(s) 553, 1020, 1926, 2127, 2236, 2561
PsuI RGATCY 9 cut(s) 628, 703, 775, 850, 1830, 2029, 2245, 2317, 2821
RsaI GTAC 3 cut(s) 440, 452, 2790
RsaNI GTAC 3 cut(s) 439, 451, 2789
RseI CAYNNNNRTG 4 cut(s) 216, 954, 1971, 2612
SacI GAGCTC 7 cut(s) 819, 1355, 1427, 1499, 1571, 1643, 1787
Sau96I GGNCC 6 cut(s) 553, 1020, 1926, 2127, 2236, 2561
SchI GAGTC 2 cut(s) 354, 2182
ScrFI CCNGG 1 cut(s) 284
SduI GDGCHC 7 cut(s) 819, 1355, 1427, 1499, 1571, 1643, 1787
SexAI ACCWGGT 1 cut(s) 282
SfcI CTRYAG 1 cut(s) 2682
SfuI TTCGAA 3 cut(s) 1523, 1595, 2758
SinI GGWCC 4 cut(s) 553, 1020, 1926, 2127
SmiMI CAYNNNNRTG 4 cut(s) 216, 954, 1971, 2612
SmlI CTYRAG 3 cut(s) 1012, 2170, 2479
SmoI CTYRAG 3 cut(s) 1012, 2170, 2479
SphI GCATGC 1 cut(s) 13
SsiI CCGC 6 cut(s) 195, 1041, 1752, 2052, 2196, 2268
SspI AATATT 5 cut(s) 548, 715, 808, 1165, 1182
SstI GAGCTC 7 cut(s) 819, 1355, 1427, 1499, 1571, 1643, 1787
StyD4I CCNGG 1 cut(s) 282
StyI CCWWGG 2 cut(s) 867, 2460
TaaI ACNGT 2 cut(s) 329, 2783
TaiI ACGT 1 cut(s) 228
TaqI TCGA 7 cut(s) 427, 1523, 1595, 2106, 2610, 2677, 2758
TatI WGTACW 1 cut(s) 450
TfiI GAWTC 9 cut(s) 1255, 1327, 1399, 1471, 1543, 1615, 1687, 2401, 2512
TscAI CASTG 5 cut(s) 80, 370, 730, 1077, 1290
TseFI GTSAC 5 cut(s) 226, 560, 1168, 2497, 2669
Tsp45I GTSAC 5 cut(s) 226, 560, 1168, 2497, 2669
TspGWI ACGGA 1 cut(s) 2437
TspRI CASTG 5 cut(s) 80, 370, 730, 1077, 1290
VpaK11BI GGWCC 4 cut(s) 553, 1020, 1926, 2127
XbaI TCTAGA 4 cut(s) 700, 811, 847, 2324
XceI RCATGY 4 cut(s) 13, 152, 1935, 2617
XcmI CCANNNNNNNNNTGG 1 cut(s) 2652
XmnI GAANNNNTTC 2 cut(s) 497, 2764
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.