MD01G1212300.v1.1

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr01
Physical Location & Seq
Reverse (-)
30567458 .. 30570612
3155 bp
Loading structure...
UTR
Exon/CDS
Intron
MD01G1212300.v1.1.491

Sequence Viewer

Length: 2895 bp
ATGTTGCTCACAATCATATATTCTGTCTTGTTTGCTCTTACATCTGCCAAATGCTGTTTGGGTGCTGGAATCAGTTCCAACATCGGGTGCTTACAAACAGAAAAAACCGCCCTGCTTCAGTTCAAACAAGGCCTCATCGACAAGTCCAACGTTCTTGCCTCTTGGGAAACCGGCAAAGATTGTTGCGAGTGGAGAGGAATCGCTTGCAATAACGAAACAGGTCATGTCGTCACCCTAGATCTCTATCACAACTCTTTTGGTATTTATAGTGTTGAAACTCCTCTAAGTGGTGTGATTGCTCCTTCTCTACTTGAATTGCCATATCTAACTTACTTGGACCTCAGTTTCAATCATTTCCAAGGACAAATTCCCAAGTTCATCGGTTCTTTGAGTCGATTGGAGCAACTCAAACTAGCAGGTGCCAATCTTAGCGGACCAATTCCTCCCCAACTCGGAAATCTCTCTAGTTTGTATACTCTTGATCTTGCACAGAACGATGTCACATTCGAAAATCTCAAGTGGTTATCTCATCTTTCTTCCTTGAGGTACCTGTATATGTCGGATCTTAATTTTTCCGAGGTTGTAAATTGGCCAGAATCTATAAGCAAACTCCGTTCACTTGTTGAGCTTCAGTTATCTTCGTGTAGTCTTCCCAATATCAAACAGAGCTCGCTTTCTTTTGTCAATTCTTCAAACTCTCTTGAAGTCCTTGAACTCTCGAATAATTTTCTTAATGTTTCGATATTTTATTGGATGGTCAATGTCAGCACCAACCTTGTTTACATTGGTTTAGCTGATAGCCAGTTGCAAGGTCCCATCCCAGATGTGTTTGCAAACACGGTTTCTCTCGTGTCTCTTGATCTCTCGGTTAACGAACTTAAAGGCGGGATACCGAAATCGTTTCGAAACCTTTGCAGTTTACGGTGGTTGAGTTTACTGGAAAACAAACTTTCCGACAGACTTGAAGACTTTGTCATAAACTTGTCTTGTGCTCAAGACACCCTCGAGTCCTTGTTCTTGAGTGGGAACCCGTTTTCGGGTTCATTTCCTGATAACATTACAAGATTTTCATCCTTGAAAGATTTGTACATTGACGTCACCAACGTAAGTGGGTCTCTTCCAAAAAATTTTCAGCCACTCTCCCAGCTAAGATACTTGAGCCTAGTTCAAAACCAGTTCACCGGATCACTGCCTGATTTTACAGGTCTTTCGTTGTTAAGGCAGTTATTTATCTCCAACAATCAACTCAGCGGATCTCTACATGAGAGTATCAGCCAACTTTCCAGCCTCGAAACGTTGGATCTTTCTCGGAATTCTTTGAATGGTGTCATAACTGAAGTGCACTTCTCCAATCTCTCCCGTTTAAAATATTTGGATTTTTCTCATAATCCTTTGTCTTTCAACTTGAGCTCGGATTGGAATCCGCCTTTTCAAACCATAAGACTAGGATTGTCCTCTTGCAAGGTTGGCCCTGCTTTTCCGAAATGGATTCAAACTCAGACAAAACTTACTTCACTTGACATGGTTAATGCTGAGATTTCGGATTCTATACCTGATAAGTTTTGGGATCTGTCTTCCAGCTTACTCGATTTAAACCTATCGATGAACCAAATCCATGGAAAGTTGCCAAATCTATCAACAAAAAACTCCACCTTCTTTTCTTTTGACTTGTCATCTAATCTCTTGGACGGCCCACTTCCACCATTTTCTTCAAATGTATCCATCCTGCGTCTCTCCAAAAACATGTTTTCAGGACCCTTATCTTCCTTTTGTGAAACAGAATCTCCAAACTTCTTTGATCTAGACCTTTCTCACAATCAGCTATCTGGTGAACTTCCTAGTTGTTGGATGCAGTTTCAAGGTTTGGTCTTTTTGAACATGGCTAAGAACAATTTCTCCGGGAAAATTCCATGCTCATTAGGCTTCTTAAAGTATGCTATGTTCTTACACTTACAGGACAACAAACGTTCCGGAGAATTGCCTTCTTTGGTGAACTGTACAGAATTAAGAGTTGTTGACCTCGGTGCCAATAAACTATCTGGAAATATACCGACATGGATAGGCCCGAGCCTAACAAAGTTGCTGGTTCTTCGCTTAAAGTCGAACGAGTTTTATGGAAGCATACCTTTAAGTCTATGCAGTCTTCCTGCGCTTCATGTTTTGGACTTCTCCAAGAACAATCTATCCGGAGCCTTGCCCCATTGCCTCCCTAACATAACAGCTTTGTCTTCGATGTCCCCCGAGGTGGAGGACAACATCCCTGTTGGGTTTGTGCAACTGACTTGGAAAGGAATACAGATTGAGTTCGGCCAAAATCTTCATCATTTGAGAAGCATTGACATTTCGAGCAACAACTTAAGCGGAGACATTCCAGAAAGTGTAACAAGCTTGCTGAAGTTGATTTCTCTGAACCTGTCAAGAAACAATTTTACTGGGGTGCTTCCTAACAACTTTGGTCAGCTCGAGATGTTAGAATCGCTTGATTTGTCACGAAACCAGATATCTGGTAGCATTCCTCCGAGTTTTTCGAGCTTACATTATCTTAGTGTCTTGGACTTGTCATACAACAACTTATCAGGAAGAATTCCCCAAAGTACTCAACTTCAAAGTTTTAATGATTCTCAATTTACTGGCAATCTTGGACTTTGTGGGCAACCGCTCTCACCAGAATGCCCGGGAGATGTAACAACGGAAGATCCTGCAGTCCCTAATGGCAGTGGAAGTGACAAGACCAAACAAGATTATGATGGTCTCATAAGCTTCGGATTTTATGTTAGCTTGGTGCTTGGATTTATCATAGGATTCTGGAGTGTTTGTGGTACCTTAGTTCTTAAGACGTCTTGGAGGTATGCCTATTTCCGATTCTTTGATGATATAAAAGCTCGGATTATGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

965

Amino Acids

106.46

Weight (kDa)

5.31

Isoelectric Point (pI)

41.09

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 32 - 70 5.5e-12 Leucine rich repeat N-terminal domain
LRR_14 PF23598 104 - 320 2e-08 Leucine-rich repeat region
LRR_8 PF13855 258 - 317 4.9e-06 Leucine rich repeat
LRR_14 PF23598 294 - 438 7.7e-06 Leucine-rich repeat region
LRR_14 PF23598 348 - 512 1.4e-09 Leucine-rich repeat region
LRR_14 PF23598 772 - 869 2.4e-06 Leucine-rich repeat region
LRR_8 PF13855 775 - 834 2.3e-10 Leucine rich repeat
LRR_4 PF12799 824 - 862 8.7e-06 Leucine Rich repeats (2 copies)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000028)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g45420 FvH4_4g14031 FvH4_5g20780 FvH4_6g28530 FvH4_7g14020 FvH4_7g14030 FvH4_7g14040 FvH4_7g14050 FvH4_7g14060 FvH4_7g14070 FvH4_7g14090 FvH4_7g14110 FvH4_7g14140 FvH4_7g14450
malus_domestica MD00G1189100.v1.1 MD01G1018600.v1.1 MD01G1053800.v1.1 MD01G1053900.v1.1 MD01G1054000.v1.1 MD01G1054100.v1.1 MD01G1056700.v1.1 MD01G1057000.v1.1 MD01G1057300.v1.1 MD01G1057400.v1.1 MD01G1061600.v1.1 MD01G1061800.v1.1 MD01G1061900.v1.1 MD01G1062000.v1.1 MD01G1062400.v1.1 MD01G1062500.v1.1 MD01G1063200.v1.1 MD01G1063300.v1.1 MD01G1063400.v1.1 MD01G1063700.v1.1 MD01G1063900.v1.1 MD01G1064200.v1.1 MD01G1064300.v1.1 MD01G1064400.v1.1 MD01G1064600.v1.1 MD01G1064700.v1.1 MD01G1181100.v1.1 MD01G1212300.v1.1 MD01G1212500.v1.1 MD01G1212600.v1.1 MD02G1271900.v1.1 MD07G1136500.v1.1 MD07G1139300.v1.1 MD07G1141200.v1.1 MD07G1144700.v1.1 MD08G1144200.v1.1 MD14G1186300.v1.1 MD14G1186500.v1.1 MD14G1186700.v1.1 MD14G1186800.v1.1 MD15G1351300.v1.1 MD15G1439500.v1.1
prunus_persica Prupe.1G067000_v2.0.a1 Prupe.2G077400_v2.0.a1 Prupe.2G077700_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078600_v2.0.a1 Prupe.2G078800_v2.0.a1 Prupe.2G099600_v2.0.a1 Prupe.2G099700_v2.0.a1 Prupe.2G155100_v2.0.a1 Prupe.2G155500_v2.0.a1 Prupe.2G155600_v2.0.a1 Prupe.2G155800_v2.0.a1 Prupe.2G155900_v2.0.a1 Prupe.2G156100_v2.0.a1 Prupe.2G166100_v2.0.a1 Prupe.2G166300_v2.0.a1 Prupe.2G167500_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G168400_v2.0.a1 Prupe.2G168700_v2.0.a1 Prupe.2G168800_v2.0.a1 Prupe.2G169000_v2.0.a1 Prupe.2G169100_v2.0.a1 Prupe.2G169200_v2.0.a1 Prupe.2G169500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G172300_v2.0.a1 Prupe.2G304800_v2.0.a1 Prupe.4G264800_v2.0.a1 Prupe.4G265000_v2.0.a1 Prupe.5G051900_v2.0.a1 Prupe.5G052000_v2.0.a1
pyrus_communis pycom01g08380 pycom01g08430 pycom01g08490 pycom01g08520 pycom01g08540 pycom01g08550 pycom01g08600 pycom01g08630 pycom01g08660 pycom01g08720 pycom01g09180 pycom01g09200 pycom01g09210 pycom01g09270 pycom01g09280 pycom01g09300 pycom01g09380 pycom01g19110 pycom01g22260 pycom01g22310 pycom01g22330 pycom01g22350 pycom01g22360 pycom02g23250 pycom07g13420 pycom07g13670 pycom07g13900 pycom07g13910 pycom07g13960 pycom07g13970 pycom07g25680 pycom11g22830
rosa_chinensis RchiOBHm_Chr0c22g0500431 RchiOBHm_Chr0c22g0500441 RchiOBHm_Chr0c22g0500561 RchiOBHm_Chr0c22g0500571 RchiOBHm_Chr0c22g0500611 RchiOBHm_Chr0c22g0500621 RchiOBHm_Chr0c22g0500631 RchiOBHm_Chr0c22g0500681 RchiOBHm_Chr1g0348221 RchiOBHm_Chr1g0348251 RchiOBHm_Chr1g0352861 RchiOBHm_Chr1g0352871 RchiOBHm_Chr1g0352891 RchiOBHm_Chr1g0352901 RchiOBHm_Chr1g0354671 RchiOBHm_Chr1g0354701 RchiOBHm_Chr1g0354711 RchiOBHm_Chr1g0354751 RchiOBHm_Chr1g0354761 RchiOBHm_Chr1g0354841 RchiOBHm_Chr1g0354851 RchiOBHm_Chr1g0354881 RchiOBHm_Chr1g0354971 RchiOBHm_Chr1g0354981 RchiOBHm_Chr1g0354991 RchiOBHm_Chr1g0355001 RchiOBHm_Chr1g0355011 RchiOBHm_Chr1g0355021 RchiOBHm_Chr1g0355861 RchiOBHm_Chr1g0379671 RchiOBHm_Chr1g0379681 RchiOBHm_Chr2g0096591 RchiOBHm_Chr2g0132821 RchiOBHm_Chr3g0454901 RchiOBHm_Chr3g0472711 RchiOBHm_Chr4g0400791 RchiOBHm_Chr5g0069481 RchiOBHm_Chr5g0069511 RchiOBHm_Chr5g0069551 RchiOBHm_Chr6g0254651 RchiOBHm_Chr6g0259721 RchiOBHm_Chr7g0205911 RchiOBHm_Chr7g0206401 RchiOBHm_Chr7g0206571 RchiOBHm_Chr7g0206581 RchiOBHm_Chr7g0206621 RchiOBHm_Chr7g0206631 RchiOBHm_Chr7g0206641 RchiOBHm_Chr7g0206681 RchiOBHm_Chr7g0206691 RchiOBHm_Chr7g0206751 RchiOBHm_Chr7g0206761 RchiOBHm_Chr7g0206851 RchiOBHm_Chr7g0206911 RchiOBHm_Chr7g0206921 RchiOBHm_Chr7g0207001 RchiOBHm_Chr7g0207011 RchiOBHm_Chr7g0207031 RchiOBHm_Chr7g0207101 RchiOBHm_Chr7g0207161 RchiOBHm_Chr7g0207201 RchiOBHm_Chr7g0207271 RchiOBHm_Chr7g0207301 RchiOBHm_Chr7g0207311 RchiOBHm_Chr7g0207421 RchiOBHm_Chr7g0207481 RchiOBHm_Chr7g0207491 RchiOBHm_Chr7g0207501 RchiOBHm_Chr7g0207521 RchiOBHm_Chr7g0207531 RchiOBHm_Chr7g0207561 RchiOBHm_Chr7g0207571 RchiOBHm_Chr7g0207581 RchiOBHm_Chr7g0207601 RchiOBHm_Chr7g0207621 RchiOBHm_Chr7g0207631 RchiOBHm_Chr7g0207651 RchiOBHm_Chr7g0207661 RchiOBHm_Chr7g0207711 RchiOBHm_Chr7g0207761 RchiOBHm_Chr7g0207801 RchiOBHm_Chr7g0208821 RchiOBHm_Chr7g0208831 RchiOBHm_Chr7g0208841 RchiOBHm_Chr7g0213601 RchiOBHm_Chr7g0215981 RchiOBHm_Chr7g0216021
rosa_laevigata RLG00000003193 RLG00000003194 RLG00000003287 RLG00000003288 RLG00000003289 RLG00000003293 RLG00000003294 RLG00000003295 RLG00000003297 RLG00000003299 RLG00000003301 RLG00000003327 RLG00000003347 RLG00000016653 RLG00000018642 RLG00000018643 RLG00000019285 RLG00000022542 RLG00000026368 RLG00000026371 RLG00000028124 RLG00000028125 RLG00000028183 RLG00000028184 RLG00000028185 RLG00000028188 RLG00000028673 RLG00000029267 RLG00000029325 RLG00000029674 RLG00000032883 RLG00000036055 RLG00000036058 RLG00000036065 RLG00000036068 RLG00000036071 RLG00000036072 RLG00000036075 RLG00000036076
rosa_multiflora Rmu_co8250183.1_g000001 Rmu_co8271981.1_g000001 Rmu_co8410829.1_g000001 Rmu_co8432879.1_g000001 Rmu_co8441941.1_g000001 Rmu_sc0000076.1_g000031 Rmu_sc0000738.1_g000038 Rmu_sc0000848.1_g000003 Rmu_sc0000848.1_g000014 Rmu_sc0000848.1_g000015 Rmu_sc0000848.1_g000016 Rmu_sc0001264.1_g000001 Rmu_sc0002284.1_g000018 Rmu_sc0002356.1_g000011 Rmu_sc0003020.1_g000003 Rmu_sc0003115.1_g000001 Rmu_sc0003115.1_g000002 Rmu_sc0003115.1_g000003 Rmu_sc0003115.1_g000004 Rmu_sc0003115.1_g000005 Rmu_sc0003115.1_g000008 Rmu_sc0003115.1_g000010 Rmu_sc0003115.1_g000011 Rmu_sc0003115.1_g000014 Rmu_sc0003565.1_g000002 Rmu_sc0003652.1_g000013 Rmu_sc0003652.1_g000015 Rmu_sc0003652.1_g000016 Rmu_sc0003652.1_g000019 Rmu_sc0003940.1_g000001 Rmu_sc0003940.1_g000004 Rmu_sc0003940.1_g000009 Rmu_sc0004084.1_g000010 Rmu_sc0004705.1_g000021 Rmu_sc0004972.1_g000007 Rmu_sc0004987.1_g000002 Rmu_sc0004987.1_g000006 Rmu_sc0005065.1_g000018 Rmu_sc0005065.1_g000029 Rmu_sc0005391.1_g000002 Rmu_sc0005633.1_g000003 Rmu_sc0005633.1_g000008 Rmu_sc0006632.1_g000014 Rmu_sc0006632.1_g000018 Rmu_sc0006681.1_g000010 Rmu_sc0006681.1_g000011 Rmu_sc0006733.1_g000003 Rmu_sc0007385.1_g000005 Rmu_sc0007385.1_g000007 Rmu_sc0007385.1_g000009 Rmu_sc0007385.1_g000016 Rmu_sc0007645.1_g000002 Rmu_sc0007645.1_g000003 Rmu_sc0007645.1_g000022 Rmu_sc0007828.1_g000008 Rmu_sc0008509.1_g000003 Rmu_sc0008509.1_g000015 Rmu_sc0008509.1_g000016 Rmu_sc0008509.1_g000020 Rmu_sc0008509.1_g000030 Rmu_sc0008509.1_g000041 Rmu_sc0008756.1_g000001 Rmu_sc0008756.1_g000003 Rmu_sc0013028.1_g000002 Rmu_sc0013028.1_g000003 Rmu_sc0013028.1_g000005 Rmu_sc0013160.1_g000001 Rmu_sc0014454.1_g000009 Rmu_sc0014455.1_g000007 Rmu_sc0014659.1_g000004 Rmu_sc0017798.1_g000002 Rmu_sc0017798.1_g000004 Rmu_sc0029608.1_g000001 Rmu_sc0037861.1_g000001 Rmu_sc0038750.1_g000001 Rmu_sc0042995.1_g000001 Rmu_ssc0000161.1_g000017
rosa_roxburghii Rroxscaffold_1G00009180 Rroxscaffold_1G00009190 Rroxscaffold_1G00011450 Rroxscaffold_1G00011480 Rroxscaffold_2G00111660 Rroxscaffold_2G00113570 Rroxscaffold_2G00122140 Rroxscaffold_3G00243730 Rroxscaffold_3G00245750 Rroxscaffold_3G00245760 Rroxscaffold_3G00250220 Rroxscaffold_3G00251160 Rroxscaffold_3G00251270 Rroxscaffold_3G00251280 Rroxscaffold_3G00251300 Rroxscaffold_3G00251340 Rroxscaffold_3G00251350 Rroxscaffold_3G00251390 Rroxscaffold_3G00251400 Rroxscaffold_3G00251560 Rroxscaffold_3G00251570 Rroxscaffold_3G00251870 Rroxscaffold_3G00252200 Rroxscaffold_3G00252210 Rroxscaffold_4G00279970 Rroxscaffold_4G00299970 Rroxscaffold_4G00300760 Rroxscaffold_4G00300780 Rroxscaffold_4G00300810 Rroxscaffold_4G00300850 Rroxscaffold_4G00307080 Rroxscaffold_4G00307100 Rroxscaffold_4G00313990 Rroxscaffold_6G00405080
rosa_rugosa Rorug01G0193600 Rorug01G0193700 Rorug01G0243800 Rorug01G0244000 Rorug01G0244000 Rorug01G0244400 Rorug01G0414300.1 Rorug01G0414500 Rorug01G0414600 Rorug02G0235600 Rorug02G0307900 Rorug02G0583100 Rorug02G0583200 Rorug02G0583300 Rorug05G0398000 Rorug05G0398100 Rorug05G0398200 Rorug05G0580300 Rorug05G0590300 Rorug06G0116000 Rorug06G0116100 Rorug07G0096800 Rorug07G0097100.1 Rorug07G0097200 Rorug07G0098600 Rorug07G0098600 Rorug07G0098700 Rorug07G0099100 Rorug07G0106100 Rorug07G0106200 Rorug07G0106200 Rorug07G0106300 Rorug07G0157600 Rorug07G0157700 Rorug07G0157700 Rorug07G0157800
rosa_samantha Rh1AG255500 Rh1AG256700 Rh1BG225800 Rh1BG226200 Rh1BG230000 Rh1CG195300 Rh1CG238400 Rh1CG238500 Rh1CG238900 Rh1CG239000 Rh1CG239300 Rh1CG239400 Rh1CG239800 Rh1CG240000 Rh1CG240200 Rh1CG240300 Rh1CG244300 Rh1CG406900 Rh1CG407300 Rh1CG407400 Rh2CG343600 Rh2DG383200 Rh3BG205900 Rh4AG404400 Rh4BG415500 Rh5AG455200 Rh5AG455600 Rh5CG497000 Rh5CG497200 Rh7AG228800 Rh7AG230400 Rh7AG230800 Rh7AG231200 Rh7AG231600 Rh7AG231800 Rh7AG232100 Rh7AG241600 Rh7BG236200 Rh7CG238200 Rh7CG239100 Rh7CG243400 Rh7CG244900
rosa_wichuraiana Rw0G023040 Rw1G017780 Rw1G022320 Rw1G022340 Rw1G022410 Rw1G022420 Rw1G022440 Rw1G022460 Rw1G022490 Rw1G022500 Rw1G022530 Rw1G022550 Rw1G022560 Rw1G022600 Rw1G023060 Rw1G038150 Rw1G038160 Rw2G008210 Rw2G022350 Rw2G029290 Rw4G015050 Rw4G019850 Rw5G024060 Rw5G042460 Rw7G019160 Rw7G019460 Rw7G019690 Rw7G019830 Rw7G019860 Rw7G019880 Rw7G019890 Rw7G019930 Rw7G019990 Rw7G020460 Rw7G025100 Rw7G025120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 407
AatII GACGTC 2 cut(s) 1098, 2840
Acc36I ACCTGC 1 cut(s) 407
Acc65I GGTACC 2 cut(s) 546, 2819
AccB1I GGYRCC 4 cut(s) 419, 546, 2024, 2819
AccBSI CCGCTC 1 cut(s) 2659
AccI GTMKAC 1 cut(s) 473
AccIII TCCGGA 2 cut(s) 1970, 2186
AciI CCGC 7 cut(s) 108, 432, 885, 1251, 1424, 2361, 2657
AclI AACGTT 3 cut(s) 150, 1295, 1966
AclWI GGATC 6 cut(s) 570, 1192, 1261, 1308, 1575, 2690
AcoI YGGCCR 2 cut(s) 590, 2308
AcsI RAATTY 5 cut(s) 366, 1126, 1312, 1905, 2583
AcuI CTGAAG 4 cut(s) 101, 614, 1356, 2414
AcyI GRCGYC 2 cut(s) 1095, 2837
AfaI GTAC 5 cut(s) 548, 1088, 1999, 2596, 2821
AfiI CCNNNNNNNGG 6 cut(s) 84, 287, 452, 1036, 1037, 2245
AflII CTTAAG 2 cut(s) 2356, 2831
AflIII ACRYGT 1 cut(s) 1743
AjuI GAANNNNNNNTTGG 2 cut(s) 351, 383
AloI GAACNNNNNNTCC 4 cut(s) 1880, 1912, 2168, 2200
Alw21I GWGCWC 4 cut(s) 671, 994, 1344, 1412
Alw26I GTCTC 5 cut(s) 858, 1119, 1736, 2358, 2756
Alw44I GTGCAC 1 cut(s) 1340
AlwI GGATC 6 cut(s) 570, 1192, 1261, 1308, 1575, 2690
Ama87I CYCGRG 5 cut(s) 1004, 2065, 2240, 2462, 2674
Aor13HI TCCGGA 2 cut(s) 1970, 2186
AoxI GGCC 6 cut(s) 130, 590, 1468, 1690, 2062, 2308
ApaLI GTGCAC 1 cut(s) 1340
ApoI RAATTY 5 cut(s) 366, 1126, 1312, 1905, 2583
Asp700I GAANNNNTTC 2 cut(s) 73, 1892
Asp718I GGTACC 2 cut(s) 546, 2819
AspLEI GCGC 1 cut(s) 2152
AspS9I GGNCC 7 cut(s) 337, 434, 812, 1469, 1691, 1754, 2063
AsuC2I CCSGG 3 cut(s) 1900, 2675, 2676
AsuHPI GGTGA 6 cut(s) 223, 1090, 1171, 1841, 2002, 2655
AsuII TTCGAA 2 cut(s) 507, 904
AvaI CYCGRG 5 cut(s) 1004, 2065, 2240, 2462, 2674
AvaII GGWCC 4 cut(s) 337, 434, 812, 1754
BaeGI GKGCMC 1 cut(s) 1344
BaeI ACNNNNGTAYC 2 cut(s) 2811, 2844
BalI TGGCCA 1 cut(s) 592
BanI GGYRCC 4 cut(s) 419, 546, 2024, 2819
BanII GRGCYC 2 cut(s) 671, 1412
BauI CACGAG 1 cut(s) 848
BbsI GAAGAC 5 cut(s) 641, 972, 1566, 2135, 2220
Bbv12I GWGCWC 4 cut(s) 671, 994, 1344, 1412
BccI CCATC 4 cut(s) 748, 824, 1730, 2741
BceAI ACGGC 1 cut(s) 1705
BcgI CGANNNNNNTGC 2 cut(s) 894, 928
BciVI GTATCC 2 cut(s) 882, 1729
BcnI CCSGG 3 cut(s) 1900, 2675, 2676
BcoDI GTCTC 5 cut(s) 858, 1119, 1736, 2358, 2756
BfaI CTAG 7 cut(s) 236, 413, 465, 1163, 1445, 1802, 1839
BfmI CTRYAG 1 cut(s) 2700
BfrI CTTAAG 2 cut(s) 2356, 2831
BfuAI ACCTGC 1 cut(s) 407
BfuI GTATCC 2 cut(s) 882, 1729
BglII AGATCT 1 cut(s) 238
BmcAI AGTACT 1 cut(s) 2596
Bme1390I CCNGG 3 cut(s) 1900, 2675, 2676
Bme18I GGWCC 4 cut(s) 337, 434, 812, 1754
BmeT110I CYCGRG 5 cut(s) 1004, 2065, 2240, 2462, 2674
BmgT120I GGNCC 7 cut(s) 337, 434, 812, 1469, 1691, 1754, 2063
BmiI GGNNCC 8 cut(s) 421, 548, 814, 1028, 1756, 2026, 2191, 2821
BmrFI CCNGG 3 cut(s) 1900, 2675, 2676
BmrI ACTGGG 1 cut(s) 2442
BmsI GCATC 1 cut(s) 1839
BmuI ACTGGG 1 cut(s) 2442
BpiI GAAGAC 5 cut(s) 641, 972, 1566, 2135, 2220
BpmI CTGGAG 1 cut(s) 2827
Bpu14I TTCGAA 2 cut(s) 507, 904
BpuEI CTTGAG 6 cut(s) 500, 562, 978, 1039, 1177, 1426
BpuMI CCSGG 3 cut(s) 1900, 2675, 2676
Bsa29I ATCGAT 1 cut(s) 1601
BsaBI GATNNNNATC 3 cut(s) 243, 1069, 1419
BsaHI GRCGYC 2 cut(s) 1095, 2837
BsaI GGTCTC 2 cut(s) 1119, 2756
BsaJI CCNNGG 6 cut(s) 358, 576, 1615, 2020, 2241, 2674
BsaWI WCCGGW 3 cut(s) 1181, 1970, 2186
BsaXI ACNNNNNCTCC 6 cut(s) 1768, 1798, 1880, 1910, 2800, 2830
Bsc4I CCNNNNNNNGG 6 cut(s) 84, 287, 452, 1036, 1037, 2245
Bse118I RCCGGY 1 cut(s) 170
Bse1I ACTGG 5 cut(s) 802, 942, 1174, 2437, 2635
Bse3DI GCAATG 1 cut(s) 2200
Bse8I GATNNNNATC 3 cut(s) 243, 1069, 1419
BseAI TCCGGA 2 cut(s) 1970, 2186
BseCI ATCGAT 1 cut(s) 1601
BseDI CCNNGG 6 cut(s) 358, 576, 1615, 2020, 2241, 2674
BseGI GGATG 6 cut(s) 759, 816, 1070, 1722, 1854, 2256
BseJI GATNNNNATC 3 cut(s) 243, 1069, 1419
BseLI CCNNNNNNNGG 6 cut(s) 84, 287, 452, 1036, 1037, 2245
BseMI GCAATG 1 cut(s) 2200
BseMII CTCAG 4 cut(s) 355, 1261, 1511, 1524
BseNI ACTGG 5 cut(s) 802, 942, 1174, 2437, 2635
BseRI GAGGAG 1 cut(s) 270
BseSI GKGCMC 1 cut(s) 1344
BseYI CCCAGC 1 cut(s) 1143
BshFI GGCC 6 cut(s) 132, 592, 1470, 1692, 2064, 2310
BshNI GGYRCC 4 cut(s) 419, 546, 2024, 2819
BshVI ATCGAT 1 cut(s) 1601
BsiHKAI GWGCWC 4 cut(s) 671, 994, 1344, 1412
BsiHKCI CYCGRG 5 cut(s) 1004, 2065, 2240, 2462, 2674
BsiSI CCGG 6 cut(s) 171, 1182, 1899, 1971, 2187, 2675
BslFI GGGAC 3 cut(s) 798, 2221, 2690
BslI CCNNNNNNNGG 6 cut(s) 84, 287, 452, 1036, 1037, 2245
BsmAI GTCTC 5 cut(s) 858, 1119, 1736, 2358, 2756
BsmBI CGTCTC 1 cut(s) 1736
BsmFI GGGAC 3 cut(s) 798, 2221, 2690
BsmI GAATGC 2 cut(s) 2511, 2675
BsnI GGCC 6 cut(s) 132, 592, 1470, 1692, 2064, 2310
Bso31I GGTCTC 2 cut(s) 1119, 2756
BsoBI CYCGRG 5 cut(s) 1004, 2065, 2240, 2462, 2674
Bsp119I TTCGAA 2 cut(s) 507, 904
Bsp1286I GDGCHC 4 cut(s) 671, 994, 1344, 1412
Bsp13I TCCGGA 2 cut(s) 1970, 2186
Bsp1407I TGTACA 2 cut(s) 1086, 1997
Bsp19I CCATGG 1 cut(s) 1615
BspACI CCGC 7 cut(s) 108, 432, 885, 1251, 1424, 2361, 2657
BspANI GGCC 6 cut(s) 132, 592, 1470, 1692, 2064, 2310
BspCNI CTCAG 4 cut(s) 354, 1260, 1510, 1525
BspDI ATCGAT 1 cut(s) 1601
BspEI TCCGGA 2 cut(s) 1970, 2186
BspLI GGNNCC 8 cut(s) 421, 548, 814, 1028, 1756, 2026, 2191, 2821
BspMAI CTGCAG 1 cut(s) 2704
BspMI ACCTGC 1 cut(s) 407
BspPI GGATC 6 cut(s) 570, 1192, 1261, 1308, 1575, 2690
BspT104I TTCGAA 2 cut(s) 507, 904
BspT107I GGYRCC 4 cut(s) 419, 546, 2024, 2819
BspTI CTTAAG 2 cut(s) 2356, 2831
BspTNI GGTCTC 2 cut(s) 1119, 2756
BsrBI CCGCTC 1 cut(s) 2659
BsrDI GCAATG 1 cut(s) 2200
BsrFI RCCGGY 1 cut(s) 170
BsrGI TGTACA 2 cut(s) 1086, 1997
BsrI ACTGG 5 cut(s) 802, 942, 1174, 2437, 2635
BssAI RCCGGY 1 cut(s) 170
BssECI CCNNGG 6 cut(s) 358, 576, 1615, 2020, 2241, 2674
BssNAI GTATAC 1 cut(s) 474
BssNI GRCGYC 2 cut(s) 1095, 2837
BssSI CACGAG 1 cut(s) 848
BssT1I CCWWGG 2 cut(s) 358, 1615
Bst1107I GTATAC 1 cut(s) 474
Bst2BI CACGAG 1 cut(s) 848
Bst4CI ACNGT 3 cut(s) 841, 924, 1997
Bst6I CTCTTC 1 cut(s) 1122
BstACI GRCGYC 2 cut(s) 1095, 2837
BstAFI CTTAAG 2 cut(s) 2356, 2831
BstAUI TGTACA 2 cut(s) 1086, 1997
BstBI TTCGAA 2 cut(s) 507, 904
BstC8I GCNNGC 3 cut(s) 205, 671, 2390
BstDSI CCRYGG 1 cut(s) 1615
BstF5I GGATG 6 cut(s) 759, 816, 1070, 1722, 1854, 2256
BstHHI GCGC 1 cut(s) 2152
BstMAI GTCTC 5 cut(s) 858, 1119, 1736, 2358, 2756
BstMWI GCNNNNNNNGC 2 cut(s) 1467, 1920
BstNSI RCATGY 1 cut(s) 1747
BstSCI CCNGG 3 cut(s) 1898, 2673, 2674
BstSFI CTRYAG 1 cut(s) 2700
BstSLI GKGCMC 1 cut(s) 1344
BstV2I GAAGAC 5 cut(s) 641, 972, 1566, 2135, 2220
BstX2I RGATCY 6 cut(s) 238, 562, 1253, 1300, 1567, 2695
BstXI CCANNNNNNTGG 2 cut(s) 1616, 2504
BstYI RGATCY 6 cut(s) 238, 562, 1253, 1300, 1567, 2695
BstZ17I GTATAC 1 cut(s) 474
Bsu15I ATCGAT 1 cut(s) 1601
BsuI GTATCC 2 cut(s) 882, 1729
BsuRI GGCC 6 cut(s) 132, 592, 1470, 1692, 2064, 2310
BsuTUI ATCGAT 1 cut(s) 1601
BtgI CCRYGG 1 cut(s) 1615
BtsCI GGATG 6 cut(s) 759, 816, 1070, 1722, 1854, 2256
BtsI GCAGTG 2 cut(s) 1187, 2722
BtsIMutI CAGTG 2 cut(s) 1187, 2722
BveI ACCTGC 1 cut(s) 407
Cac8I GCNNGC 3 cut(s) 205, 671, 2390
CfoI GCGC 1 cut(s) 2152
Cfr10I RCCGGY 1 cut(s) 170
Cfr13I GGNCC 7 cut(s) 337, 434, 812, 1469, 1691, 1754, 2063
Cfr9I CCCGGG 1 cut(s) 2674
ClaI ATCGAT 1 cut(s) 1601
CseI GACGC 1 cut(s) 1718
Csp6I GTAC 5 cut(s) 547, 1087, 1998, 2595, 2820
CspCI CAANNNNNGTGG 2 cut(s) 1090, 1125
CviAII CATG 9 cut(s) 224, 1262, 1522, 1616, 1744, 1879, 1911, 2055, 2156
CviQI GTAC 5 cut(s) 547, 1087, 1998, 2595, 2820
DraI TTTAAA 2 cut(s) 1365, 1593
EaeI YGGCCR 2 cut(s) 590, 2308
Eam1104I CTCTTC 1 cut(s) 1122
EarI CTCTTC 1 cut(s) 1122
EciI GGCGGA 1 cut(s) 1413
Ecl136II GAGCTC 2 cut(s) 669, 1410
Eco130I CCWWGG 2 cut(s) 358, 1615
Eco147I AGGCCT 1 cut(s) 132
Eco24I GRGCYC 2 cut(s) 671, 1412
Eco31I GGTCTC 2 cut(s) 1119, 2756
Eco32I GATATC 1 cut(s) 2502
Eco47I GGWCC 4 cut(s) 337, 434, 812, 1754
Eco53kI GAGCTC 2 cut(s) 669, 1410
Eco57I CTGAAG 4 cut(s) 101, 614, 1356, 2414
Eco88I CYCGRG 5 cut(s) 1004, 2065, 2240, 2462, 2674
EcoICRI GAGCTC 2 cut(s) 669, 1410
EcoO109I RGGNCCY 2 cut(s) 812, 1754
EcoRI GAATTC 2 cut(s) 1312, 2583
EcoRV GATATC 1 cut(s) 2502
EcoT14I CCWWGG 2 cut(s) 358, 1615
EcoT38I GRGCYC 2 cut(s) 671, 1412
ErhI CCWWGG 2 cut(s) 358, 1615
Esp3I CGTCTC 1 cut(s) 1736
FaeI CATG 9 cut(s) 227, 1265, 1525, 1619, 1747, 1882, 1914, 2058, 2159
FalI AAGNNNNNCTT 2 cut(s) 2110, 2142
FaqI GGGAC 3 cut(s) 798, 2221, 2690
FatI CATG 9 cut(s) 223, 1261, 1521, 1615, 1743, 1878, 1910, 2054, 2155
FauI CCCGC 1 cut(s) 878
FblI GTMKAC 1 cut(s) 473
FokI GGATG 6 cut(s) 766, 803, 1057, 1709, 1861, 2243
FriOI GRGCYC 2 cut(s) 671, 1412
FspBI CTAG 7 cut(s) 236, 413, 465, 1163, 1445, 1802, 1839
GlaI GCGC 1 cut(s) 2151
GsaI CCCAGC 1 cut(s) 1147
GsuI CTGGAG 1 cut(s) 2827
HaeIII GGCC 6 cut(s) 132, 592, 1470, 1692, 2064, 2310
HapII CCGG 6 cut(s) 171, 1182, 1899, 1971, 2187, 2675
HgaI GACGC 1 cut(s) 1718
HhaI GCGC 1 cut(s) 2152
Hin1I GRCGYC 2 cut(s) 1095, 2837
Hin1II CATG 9 cut(s) 227, 1265, 1525, 1619, 1747, 1882, 1914, 2058, 2159
Hin6I GCGC 1 cut(s) 2150
HinP1I GCGC 1 cut(s) 2150
HincII GTYRAC 2 cut(s) 871, 2017
HindII GTYRAC 2 cut(s) 871, 2017
HindIII AAGCTT 2 cut(s) 2386, 2758
HpaI GTTAAC 1 cut(s) 871
HpaII CCGG 6 cut(s) 171, 1182, 1899, 1971, 2187, 2675
HphI GGTGA 6 cut(s) 223, 1090, 1171, 1841, 2002, 2655
HpyAV CCTTC 3 cut(s) 312, 1663, 1992
HpyCH4III ACNGT 3 cut(s) 841, 924, 1997
HpyCH4IV ACGT 6 cut(s) 150, 1095, 1104, 1295, 1966, 2837
HpyF10VI GCNNNNNNNGC 2 cut(s) 1467, 1920
HpySE526I ACGT 6 cut(s) 150, 1095, 1104, 1295, 1966, 2837
Hsp92I GRCGYC 2 cut(s) 1095, 2837
Hsp92II CATG 9 cut(s) 227, 1265, 1525, 1619, 1747, 1882, 1914, 2058, 2159
HspAI GCGC 1 cut(s) 2150
Kpn2I TCCGGA 2 cut(s) 1970, 2186
KpnI GGTACC 2 cut(s) 550, 2823
KspAI GTTAAC 1 cut(s) 871
LmnI GCTCC 3 cut(s) 304, 400, 2189
LweI GCATC 1 cut(s) 1839
MaeI CTAG 7 cut(s) 236, 413, 465, 1163, 1445, 1802, 1839
MaeII ACGT 6 cut(s) 150, 1095, 1104, 1295, 1966, 2837
MaeIII GTNAC 7 cut(s) 229, 499, 1096, 2380, 2487, 2683, 2723
MbiI CCGCTC 1 cut(s) 2659
MflI RGATCY 6 cut(s) 238, 562, 1253, 1300, 1567, 2695
MhlI GDGCHC 4 cut(s) 671, 994, 1344, 1412
MlsI TGGCCA 1 cut(s) 592
MluNI TGGCCA 1 cut(s) 592
MlyI GAGTC 2 cut(s) 400, 1016
MmeI TCCRAC 7 cut(s) 102, 171, 540, 978, 1260, 1278, 1826
Mox20I TGGCCA 1 cut(s) 592
MroI TCCGGA 2 cut(s) 1970, 2186
MroXI GAANNNNTTC 2 cut(s) 73, 1892
MscI TGGCCA 1 cut(s) 592
MslI CAYNNNNRTG 1 cut(s) 2668
Msp20I TGGCCA 1 cut(s) 592
MspA1I CMGCKG 1 cut(s) 1251
MspCI CTTAAG 2 cut(s) 2356, 2831
MspI CCGG 6 cut(s) 171, 1182, 1899, 1971, 2187, 2675
MspR9I CCNGG 3 cut(s) 1900, 2675, 2676
Mva1269I GAATGC 2 cut(s) 2511, 2675
MwoI GCNNNNNNNGC 2 cut(s) 1467, 1920
NciI CCSGG 3 cut(s) 1900, 2675, 2676
NcoI CCATGG 1 cut(s) 1615
NlaIII CATG 9 cut(s) 227, 1265, 1525, 1619, 1747, 1882, 1914, 2058, 2159
NlaIV GGNNCC 8 cut(s) 421, 548, 814, 1028, 1756, 2026, 2191, 2821
NmuCI GTSAC 5 cut(s) 229, 499, 1096, 2487, 2723
NspI RCATGY 1 cut(s) 1747
NspV TTCGAA 2 cut(s) 507, 904
PaeR7I CTCGAG 2 cut(s) 1004, 2462
PaqCI CACCTGC 1 cut(s) 407
PceI AGGCCT 1 cut(s) 132
PciI ACATGT 1 cut(s) 1743
PcsI WCGNNNNNNNCGW 1 cut(s) 1101
PctI GAATGC 2 cut(s) 2511, 2675
PdmI GAANNNNTTC 2 cut(s) 73, 1892
PflFI GACNNNGTC 1 cut(s) 971
PfoI TCCNGGA 1 cut(s) 1898
PleI GAGTC 2 cut(s) 399, 1015
PpsI GAGTC 2 cut(s) 399, 1015
PpuMI RGGWCCY 2 cut(s) 812, 1754
PscI ACATGT 1 cut(s) 1743
Psp124BI GAGCTC 2 cut(s) 671, 1412
Psp1406I AACGTT 3 cut(s) 150, 1295, 1966
Psp5II RGGWCCY 2 cut(s) 812, 1754
PspFI CCCAGC 1 cut(s) 1143
PspN4I GGNNCC 8 cut(s) 421, 548, 814, 1028, 1756, 2026, 2191, 2821
PspPI GGNCC 7 cut(s) 337, 434, 812, 1469, 1691, 1754, 2063
PspPPI RGGWCCY 2 cut(s) 812, 1754
PspXI VCTCGAGB 1 cut(s) 1004
PsrI GAACNNNNNNTAC 2 cut(s) 1925, 1957
PstI CTGCAG 1 cut(s) 2704
PsuI RGATCY 6 cut(s) 238, 562, 1253, 1300, 1567, 2695
PsyI GACNNNGTC 1 cut(s) 971
RsaI GTAC 5 cut(s) 548, 1088, 1999, 2596, 2821
RsaNI GTAC 5 cut(s) 547, 1087, 1998, 2595, 2820
RseI CAYNNNNRTG 1 cut(s) 2668
SacI GAGCTC 2 cut(s) 671, 1412
Sau96I GGNCC 7 cut(s) 337, 434, 812, 1469, 1691, 1754, 2063
ScaI AGTACT 1 cut(s) 2596
SchI GAGTC 2 cut(s) 400, 1016
ScrFI CCNGG 3 cut(s) 1900, 2675, 2676
SduI GDGCHC 4 cut(s) 671, 994, 1344, 1412
SfaNI GCATC 1 cut(s) 1839
SfcI CTRYAG 1 cut(s) 2700
Sfr274I CTCGAG 2 cut(s) 1004, 2462
SfuI TTCGAA 2 cut(s) 507, 904
SinI GGWCC 4 cut(s) 337, 434, 812, 1754
SlaI CTCGAG 2 cut(s) 1004, 2462
SmaI CCCGGG 1 cut(s) 2676
SmiMI CAYNNNNRTG 1 cut(s) 2668
SseBI AGGCCT 1 cut(s) 132
SsiI CCGC 7 cut(s) 108, 432, 885, 1251, 1424, 2361, 2657
SspI AATATT 1 cut(s) 1370
SspMI CTAG 7 cut(s) 236, 413, 465, 1163, 1445, 1802, 1839
SstI GAGCTC 2 cut(s) 671, 1412
StuI AGGCCT 1 cut(s) 132
StyD4I CCNGG 3 cut(s) 1898, 2673, 2674
StyI CCWWGG 2 cut(s) 358, 1615
TaaI ACNGT 3 cut(s) 841, 924, 1997
TaiI ACGT 6 cut(s) 153, 1098, 1107, 1298, 1969, 2840
TatI WGTACW 3 cut(s) 1086, 1997, 2594
TscAI CASTG 2 cut(s) 1194, 2722
TseFI GTSAC 5 cut(s) 229, 499, 1096, 2487, 2723
Tsp45I GTSAC 5 cut(s) 229, 499, 1096, 2487, 2723
TspDTI ATGAA 6 cut(s) 367, 1032, 1059, 1619, 2144, 2309
TspGWI ACGGA 2 cut(s) 602, 2705
TspMI CCCGGG 1 cut(s) 2674
TspRI CASTG 2 cut(s) 1194, 2722
Tth111I GACNNNGTC 1 cut(s) 971
Vha464I CTTAAG 2 cut(s) 2356, 2831
VneI GTGCAC 1 cut(s) 1340
VpaK11BI GGWCC 4 cut(s) 337, 434, 812, 1754
XapI RAATTY 5 cut(s) 366, 1126, 1312, 1905, 2583
XbaI TCTAGA 1 cut(s) 1801
XceI RCATGY 1 cut(s) 1747
XcmI CCANNNNNNNNNTGG 1 cut(s) 55
XhoI CTCGAG 2 cut(s) 1004, 2462
XmaI CCCGGG 1 cut(s) 2674
XmiI GTMKAC 1 cut(s) 473
XmnI GAANNNNTTC 2 cut(s) 73, 1892
XspI CTAG 7 cut(s) 236, 413, 465, 1163, 1445, 1802, 1839
ZraI GACGTC 2 cut(s) 1096, 2838
ZrmI AGTACT 1 cut(s) 2596
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.