RchiOBHm_Chr7g0205911

Leucine Rich repeat

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Reverse (-)
23625098 .. 23627962
2865 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ18425

Sequence Viewer

Length: 2865 bp
ATGAGTAGTGGGTCTATGCATTCTGGTTTGGTTGGGCTTGTGTGCCTGGCCATTGCCTCTGCTATTTGTTGTTCAAGTGTTGGAAGCTCCAACAACATCATGTGCTTGGAGAGTGAAAGGCATGCTCTTCTCCAGTTCAAACAAGGCCTTGTGGATGACTCCAATGCTCTTGCCTCTTGGAAAAGTGAGAAAGATTGTTGCAAGTGGAGAGGAATAGAATGCAACAACCAAACAGGTCATGTTACCAGTCTTGATTTCTCCTTTAATTATGATGCATATTTCAGTTCTGCTGAAGTTCCTTTAAGTGGTGAAATTAGTCCTTCACTACTTGAATTGAGATATCTAAATTACTTGGACCTCAGTTCTATTGATTTTGGAGAAAATATGATTCCCAAGTTCATTGGCTCTTTGAGTCAATTGAAACAACTCAAACTTGCAGATGCTAATTTCAGTGGACCTGTTCCTCCCCAACTTGGGAACCTCTCTAATTTGCACACTCTTGATCTTTCCTTCAATGATTTTGAAGGAATGATGATTCCCAAATTCATTGGCTCTCTGAGTCAATTGAAAGAACTCAAACTTGTATATTCTAATTTCAGTGGACCTGTTCCTCCCCAACTTGGAAACGTCTCTAATTTGCACACTCTTGATCTTTCCTCCAATGATTTTGAAGGAATGATGATTCCCAAATTCATTGGCTCTCTGAGTCAATTGAAAGAGCTCAAACTTGCAGATGCTAATTTCAGTGGACCTGTTCCTCCCCAACTTGGGAACCTCTCTAATTTGCACACTCTTGATCTTTCCTCCAATGATTTTGAAGGAATGATGATTCCCAAATTCATTGGCTCTCTGAGTCAATTGAAAGAACTCAAACTTGCATATGCTAATTTCAGTGGACCTGTTCCTCCCCAACTTGGAAACCTCTCTAATTTGCACACTCTTGATCTTTACAGTAACCAAGTTGTTAGTCCTGAAAATCTTGAGTGGTTATCTCATCTTTCTTCCTTGAGATACCTGAACATGTCATATCTAGATTTGTCAAAGGTTGTGAATTGGCCACAATCTTTAAGCAAGCTCACTTCACTTACAGAGCTCAGGTTATCTTCGTGTAGTCTTCCTGGTGTCAATCTAAAATCACTTTCCTTTATTAATTCTTCCACCTCTCTTCAACTCCTTGACCTCTCTTTTAACTCTCTGCTTAATTCTTCAATATTTTATTGGATCGCCAATGTCAGCAGCAACTTTGTCCATATTGATCTCTCTTACAATCAACTTGAAGGTGGGATACCAAAAGGCTTTGAAAACTTATGCAGCTTAGAGTCGTTGACCTTATATCGCAACCAGTTGTCTGAAAACATTCAAGACTCTGTTAAAACCTTGTCTTGTGCTGAGAACACACTTGACACCTTGGACTTGGGTGCTAACCGGTTTTGGGGGTACTTGCCAGATTTGAAACGTTTTTCAAAGTTAAAAGTGTTATATCTTGACGGGAATCAACTAAATGGGTCTGTACCCGCGAGTGTCGGGCAACTCTCTAGCCTTGAAACATTATCTCTCTCCGGGAATTCTTTGAGTGGTGTCATAACAGAAGCCCACTTTTTGAACCTCTCTCGTTTACAATCTCTGGCCGTTTCTAATAACCGTTTCTCTATCAACCTGAGCTCTGATTGGAATCCACCATTTCAACTTACTGGTTGGTTAGATATGTCCTCTTGCAAGGTGGGCCCAGCTTTTCCCAAGTGGATTCTAAGGCAAACGAATCTTACCTATCTTTCTCTCTCTAATGCTGGACTATCAGGAAAACTGCCGAATCTGTCATCGACAAGCTTGAGTCTTCTGAATTTGGGAAAGAATAAATTATCTGGAAAAATACCAAGCTGGTTAGGCAATCTACAGGGAATTGGGATATTGCGTTTACATGATAACAACTTTTCAGGAGAATTGCCTTCTTTAGAGAACTGTACCGGATTATTGATGGTTGACCTTGGCAACAATAAGTTGTCGGGAAAGATACCAACATGGATTGGCCAAAGCCTAACAGACTTGGTGATTCTACGCTTACGGTCCAATGAGTTCAATGGAATCATACCCTTCTCACTGTGTAATCTAGCCAGCATTCATGTCTTGGACCTCTCTCACAACAATATTTCAGGAGGCTTGCCACATTGCTTCAATAACATAACCGCTTTGGCTCATGATTCGGGAGTTGGTGGTTTAATTGTGGAACTTGTGTGGAAAGGAATAGAAATTGAGTTTCCCAATATTACAGGTTTGAGAAGCATTGACATTTCAAGCAACTATTTGATTGGGAAAATTCCGCAAAGCATAGCAAATATGACACAGTTGATTTCTCTGAACCTGTCAAGAAACAATTTGATGGGAAAGCTTCCTGAAAACTTTGGTAACTTGAAGATGTTAGAATCTCTTGATTTGTCAAGAAACCAGATATCTGGTAAAATTCCTGCAAGTTTTGCGAGCTTAAACTTTCTTAGTGTCTTGGACTTATCATACAACAACTTGTCAGGAAGAATTCCAACTAGCACTCAACTTCAAAGTTTTGATGCTTCTAAATATATGGGAAATCATGGACTTTGTGGACCACCGCTGACACCAAATTGCTCACGAGATGGAGCAACTCAAGCTGATGATAACAAAGAACATGATAAAGATGGTCTCATAAGCCTGGGATTCTTTATCAGTGTAGTGCTGGGATTCGTCACTGGATTTTGGATGGTCTGCGGCAGTTTACTGCTTGAGACTTCTTATAGATATGCTTATTTCAGATTCCTGGACAATGCAAAAGATTGGATTTTTGTCAAAACTTCTGTGTACAAGGCAGAAGTGCAGAGGACACTTCAAAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

954

Amino Acids

104.48

Weight (kDa)

5.9

Isoelectric Point (pI)

35.23

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 37 - 75 4.4e-13 Leucine rich repeat N-terminal domain
LRR_14 PF23598 104 - 241 8.7e-14 Leucine-rich repeat region
LRR_14 PF23598 205 - 452 6.7e-19 Leucine-rich repeat region
LRR_8 PF13855 466 - 524 1.3e-06 Leucine rich repeat
LRR_8 PF13855 489 - 549 2.2e-07 Leucine rich repeat
LRR_14 PF23598 774 - 852 5.9e-07 Leucine-rich repeat region
LRR_8 PF13855 797 - 840 4.8e-07 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000028)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g45420 FvH4_4g14031 FvH4_5g20780 FvH4_6g28530 FvH4_7g14020 FvH4_7g14030 FvH4_7g14040 FvH4_7g14050 FvH4_7g14060 FvH4_7g14070 FvH4_7g14090 FvH4_7g14110 FvH4_7g14140 FvH4_7g14450
malus_domestica MD00G1189100.v1.1 MD01G1018600.v1.1 MD01G1053800.v1.1 MD01G1053900.v1.1 MD01G1054000.v1.1 MD01G1054100.v1.1 MD01G1056700.v1.1 MD01G1057000.v1.1 MD01G1057300.v1.1 MD01G1057400.v1.1 MD01G1061600.v1.1 MD01G1061800.v1.1 MD01G1061900.v1.1 MD01G1062000.v1.1 MD01G1062400.v1.1 MD01G1062500.v1.1 MD01G1063200.v1.1 MD01G1063300.v1.1 MD01G1063400.v1.1 MD01G1063700.v1.1 MD01G1063900.v1.1 MD01G1064200.v1.1 MD01G1064300.v1.1 MD01G1064400.v1.1 MD01G1064600.v1.1 MD01G1064700.v1.1 MD01G1181100.v1.1 MD01G1212300.v1.1 MD01G1212500.v1.1 MD01G1212600.v1.1 MD02G1271900.v1.1 MD07G1136500.v1.1 MD07G1139300.v1.1 MD07G1141200.v1.1 MD07G1144700.v1.1 MD08G1144200.v1.1 MD14G1186300.v1.1 MD14G1186500.v1.1 MD14G1186700.v1.1 MD14G1186800.v1.1 MD15G1351300.v1.1 MD15G1439500.v1.1
prunus_persica Prupe.1G067000_v2.0.a1 Prupe.2G077400_v2.0.a1 Prupe.2G077700_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078600_v2.0.a1 Prupe.2G078800_v2.0.a1 Prupe.2G099600_v2.0.a1 Prupe.2G099700_v2.0.a1 Prupe.2G155100_v2.0.a1 Prupe.2G155500_v2.0.a1 Prupe.2G155600_v2.0.a1 Prupe.2G155800_v2.0.a1 Prupe.2G155900_v2.0.a1 Prupe.2G156100_v2.0.a1 Prupe.2G166100_v2.0.a1 Prupe.2G166300_v2.0.a1 Prupe.2G167500_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G168400_v2.0.a1 Prupe.2G168700_v2.0.a1 Prupe.2G168800_v2.0.a1 Prupe.2G169000_v2.0.a1 Prupe.2G169100_v2.0.a1 Prupe.2G169200_v2.0.a1 Prupe.2G169500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G172300_v2.0.a1 Prupe.2G304800_v2.0.a1 Prupe.4G264800_v2.0.a1 Prupe.4G265000_v2.0.a1 Prupe.5G051900_v2.0.a1 Prupe.5G052000_v2.0.a1
pyrus_communis pycom01g08380 pycom01g08430 pycom01g08490 pycom01g08520 pycom01g08540 pycom01g08550 pycom01g08600 pycom01g08630 pycom01g08660 pycom01g08720 pycom01g09180 pycom01g09200 pycom01g09210 pycom01g09270 pycom01g09280 pycom01g09300 pycom01g09380 pycom01g19110 pycom01g22260 pycom01g22310 pycom01g22330 pycom01g22350 pycom01g22360 pycom02g23250 pycom07g13420 pycom07g13670 pycom07g13900 pycom07g13910 pycom07g13960 pycom07g13970 pycom07g25680 pycom11g22830
rosa_chinensis RchiOBHm_Chr0c22g0500431 RchiOBHm_Chr0c22g0500441 RchiOBHm_Chr0c22g0500561 RchiOBHm_Chr0c22g0500571 RchiOBHm_Chr0c22g0500611 RchiOBHm_Chr0c22g0500621 RchiOBHm_Chr0c22g0500631 RchiOBHm_Chr0c22g0500681 RchiOBHm_Chr1g0348221 RchiOBHm_Chr1g0348251 RchiOBHm_Chr1g0352861 RchiOBHm_Chr1g0352871 RchiOBHm_Chr1g0352891 RchiOBHm_Chr1g0352901 RchiOBHm_Chr1g0354671 RchiOBHm_Chr1g0354701 RchiOBHm_Chr1g0354711 RchiOBHm_Chr1g0354751 RchiOBHm_Chr1g0354761 RchiOBHm_Chr1g0354841 RchiOBHm_Chr1g0354851 RchiOBHm_Chr1g0354881 RchiOBHm_Chr1g0354971 RchiOBHm_Chr1g0354981 RchiOBHm_Chr1g0354991 RchiOBHm_Chr1g0355001 RchiOBHm_Chr1g0355011 RchiOBHm_Chr1g0355021 RchiOBHm_Chr1g0355861 RchiOBHm_Chr1g0379671 RchiOBHm_Chr1g0379681 RchiOBHm_Chr2g0096591 RchiOBHm_Chr2g0132821 RchiOBHm_Chr3g0454901 RchiOBHm_Chr3g0472711 RchiOBHm_Chr4g0400791 RchiOBHm_Chr5g0069481 RchiOBHm_Chr5g0069511 RchiOBHm_Chr5g0069551 RchiOBHm_Chr6g0254651 RchiOBHm_Chr6g0259721 RchiOBHm_Chr7g0205911 RchiOBHm_Chr7g0206401 RchiOBHm_Chr7g0206571 RchiOBHm_Chr7g0206581 RchiOBHm_Chr7g0206621 RchiOBHm_Chr7g0206631 RchiOBHm_Chr7g0206641 RchiOBHm_Chr7g0206681 RchiOBHm_Chr7g0206691 RchiOBHm_Chr7g0206751 RchiOBHm_Chr7g0206761 RchiOBHm_Chr7g0206851 RchiOBHm_Chr7g0206911 RchiOBHm_Chr7g0206921 RchiOBHm_Chr7g0207001 RchiOBHm_Chr7g0207011 RchiOBHm_Chr7g0207031 RchiOBHm_Chr7g0207101 RchiOBHm_Chr7g0207161 RchiOBHm_Chr7g0207201 RchiOBHm_Chr7g0207271 RchiOBHm_Chr7g0207301 RchiOBHm_Chr7g0207311 RchiOBHm_Chr7g0207421 RchiOBHm_Chr7g0207481 RchiOBHm_Chr7g0207491 RchiOBHm_Chr7g0207501 RchiOBHm_Chr7g0207521 RchiOBHm_Chr7g0207531 RchiOBHm_Chr7g0207561 RchiOBHm_Chr7g0207571 RchiOBHm_Chr7g0207581 RchiOBHm_Chr7g0207601 RchiOBHm_Chr7g0207621 RchiOBHm_Chr7g0207631 RchiOBHm_Chr7g0207651 RchiOBHm_Chr7g0207661 RchiOBHm_Chr7g0207711 RchiOBHm_Chr7g0207761 RchiOBHm_Chr7g0207801 RchiOBHm_Chr7g0208821 RchiOBHm_Chr7g0208831 RchiOBHm_Chr7g0208841 RchiOBHm_Chr7g0213601 RchiOBHm_Chr7g0215981 RchiOBHm_Chr7g0216021
rosa_laevigata RLG00000003193 RLG00000003194 RLG00000003287 RLG00000003288 RLG00000003289 RLG00000003293 RLG00000003294 RLG00000003295 RLG00000003297 RLG00000003299 RLG00000003301 RLG00000003327 RLG00000003347 RLG00000016653 RLG00000018642 RLG00000018643 RLG00000019285 RLG00000022542 RLG00000026368 RLG00000026371 RLG00000028124 RLG00000028125 RLG00000028183 RLG00000028184 RLG00000028185 RLG00000028188 RLG00000028673 RLG00000029267 RLG00000029325 RLG00000029674 RLG00000032883 RLG00000036055 RLG00000036058 RLG00000036065 RLG00000036068 RLG00000036071 RLG00000036072 RLG00000036075 RLG00000036076
rosa_multiflora Rmu_co8250183.1_g000001 Rmu_co8271981.1_g000001 Rmu_co8410829.1_g000001 Rmu_co8432879.1_g000001 Rmu_co8441941.1_g000001 Rmu_sc0000076.1_g000031 Rmu_sc0000738.1_g000038 Rmu_sc0000848.1_g000003 Rmu_sc0000848.1_g000014 Rmu_sc0000848.1_g000015 Rmu_sc0000848.1_g000016 Rmu_sc0001264.1_g000001 Rmu_sc0002284.1_g000018 Rmu_sc0002356.1_g000011 Rmu_sc0003020.1_g000003 Rmu_sc0003115.1_g000001 Rmu_sc0003115.1_g000002 Rmu_sc0003115.1_g000003 Rmu_sc0003115.1_g000004 Rmu_sc0003115.1_g000005 Rmu_sc0003115.1_g000008 Rmu_sc0003115.1_g000010 Rmu_sc0003115.1_g000011 Rmu_sc0003115.1_g000014 Rmu_sc0003565.1_g000002 Rmu_sc0003652.1_g000013 Rmu_sc0003652.1_g000015 Rmu_sc0003652.1_g000016 Rmu_sc0003652.1_g000019 Rmu_sc0003940.1_g000001 Rmu_sc0003940.1_g000004 Rmu_sc0003940.1_g000009 Rmu_sc0004084.1_g000010 Rmu_sc0004705.1_g000021 Rmu_sc0004972.1_g000007 Rmu_sc0004987.1_g000002 Rmu_sc0004987.1_g000006 Rmu_sc0005065.1_g000018 Rmu_sc0005065.1_g000029 Rmu_sc0005391.1_g000002 Rmu_sc0005633.1_g000003 Rmu_sc0005633.1_g000008 Rmu_sc0006632.1_g000014 Rmu_sc0006632.1_g000018 Rmu_sc0006681.1_g000010 Rmu_sc0006681.1_g000011 Rmu_sc0006733.1_g000003 Rmu_sc0007385.1_g000005 Rmu_sc0007385.1_g000007 Rmu_sc0007385.1_g000009 Rmu_sc0007385.1_g000016 Rmu_sc0007645.1_g000002 Rmu_sc0007645.1_g000003 Rmu_sc0007645.1_g000022 Rmu_sc0007828.1_g000008 Rmu_sc0008509.1_g000003 Rmu_sc0008509.1_g000015 Rmu_sc0008509.1_g000016 Rmu_sc0008509.1_g000020 Rmu_sc0008509.1_g000030 Rmu_sc0008509.1_g000041 Rmu_sc0008756.1_g000001 Rmu_sc0008756.1_g000003 Rmu_sc0013028.1_g000002 Rmu_sc0013028.1_g000003 Rmu_sc0013028.1_g000005 Rmu_sc0013160.1_g000001 Rmu_sc0014454.1_g000009 Rmu_sc0014455.1_g000007 Rmu_sc0014659.1_g000004 Rmu_sc0017798.1_g000002 Rmu_sc0017798.1_g000004 Rmu_sc0029608.1_g000001 Rmu_sc0037861.1_g000001 Rmu_sc0038750.1_g000001 Rmu_sc0042995.1_g000001 Rmu_ssc0000161.1_g000017
rosa_roxburghii Rroxscaffold_1G00009180 Rroxscaffold_1G00009190 Rroxscaffold_1G00011450 Rroxscaffold_1G00011480 Rroxscaffold_2G00111660 Rroxscaffold_2G00113570 Rroxscaffold_2G00122140 Rroxscaffold_3G00243730 Rroxscaffold_3G00245750 Rroxscaffold_3G00245760 Rroxscaffold_3G00250220 Rroxscaffold_3G00251160 Rroxscaffold_3G00251270 Rroxscaffold_3G00251280 Rroxscaffold_3G00251300 Rroxscaffold_3G00251340 Rroxscaffold_3G00251350 Rroxscaffold_3G00251390 Rroxscaffold_3G00251400 Rroxscaffold_3G00251560 Rroxscaffold_3G00251570 Rroxscaffold_3G00251870 Rroxscaffold_3G00252200 Rroxscaffold_3G00252210 Rroxscaffold_4G00279970 Rroxscaffold_4G00299970 Rroxscaffold_4G00300760 Rroxscaffold_4G00300780 Rroxscaffold_4G00300810 Rroxscaffold_4G00300850 Rroxscaffold_4G00307080 Rroxscaffold_4G00307100 Rroxscaffold_4G00313990 Rroxscaffold_6G00405080
rosa_rugosa Rorug01G0193600 Rorug01G0193700 Rorug01G0243800 Rorug01G0244000 Rorug01G0244000 Rorug01G0244400 Rorug01G0414300.1 Rorug01G0414500 Rorug01G0414600 Rorug02G0235600 Rorug02G0307900 Rorug02G0583100 Rorug02G0583200 Rorug02G0583300 Rorug05G0398000 Rorug05G0398100 Rorug05G0398200 Rorug05G0580300 Rorug05G0590300 Rorug06G0116000 Rorug06G0116100 Rorug07G0096800 Rorug07G0097100.1 Rorug07G0097200 Rorug07G0098600 Rorug07G0098600 Rorug07G0098700 Rorug07G0099100 Rorug07G0106100 Rorug07G0106200 Rorug07G0106200 Rorug07G0106300 Rorug07G0157600 Rorug07G0157700 Rorug07G0157700 Rorug07G0157800
rosa_samantha Rh1AG255500 Rh1AG256700 Rh1BG225800 Rh1BG226200 Rh1BG230000 Rh1CG195300 Rh1CG238400 Rh1CG238500 Rh1CG238900 Rh1CG239000 Rh1CG239300 Rh1CG239400 Rh1CG239800 Rh1CG240000 Rh1CG240200 Rh1CG240300 Rh1CG244300 Rh1CG406900 Rh1CG407300 Rh1CG407400 Rh2CG343600 Rh2DG383200 Rh3BG205900 Rh4AG404400 Rh4BG415500 Rh5AG455200 Rh5AG455600 Rh5CG497000 Rh5CG497200 Rh7AG228800 Rh7AG230400 Rh7AG230800 Rh7AG231200 Rh7AG231600 Rh7AG231800 Rh7AG232100 Rh7AG241600 Rh7BG236200 Rh7CG238200 Rh7CG239100 Rh7CG243400 Rh7CG244900
rosa_wichuraiana Rw0G023040 Rw1G017780 Rw1G022320 Rw1G022340 Rw1G022410 Rw1G022420 Rw1G022440 Rw1G022460 Rw1G022490 Rw1G022500 Rw1G022530 Rw1G022550 Rw1G022560 Rw1G022600 Rw1G023060 Rw1G038150 Rw1G038160 Rw2G008210 Rw2G022350 Rw2G029290 Rw4G015050 Rw4G019850 Rw5G024060 Rw5G042460 Rw7G019160 Rw7G019460 Rw7G019690 Rw7G019830 Rw7G019860 Rw7G019880 Rw7G019890 Rw7G019930 Rw7G019990 Rw7G020460 Rw7G025100 Rw7G025120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 1517
AciI CCGC 5 cut(s) 1515, 2184, 2318, 2603, 2739
AclI AACGTT 1 cut(s) 1456
AclWI GGATC 1 cut(s) 1229
AcoI YGGCCR 4 cut(s) 48, 1055, 1626, 2026
AcsI RAATTY 8 cut(s) 542, 689, 836, 1564, 1840, 2313, 2457, 2529
AcuI CTGAAG 1 cut(s) 312
AfaI GTAC 4 cut(s) 1439, 1512, 1963, 2831
AfiI CCNNNNNNNGG 8 cut(s) 305, 473, 474, 620, 767, 768, 914, 1432
AflIII ACRYGT 1 cut(s) 1020
AgeI ACCGGT 1 cut(s) 1425
AjnI CCWGG 4 cut(s) 45, 1117, 2682, 2787
Alw21I GWGCWC 3 cut(s) 723, 1095, 1664
Alw26I GTCTC 3 cut(s) 634, 2678, 2750
AlwI GGATC 1 cut(s) 1229
AoxI GGCC 6 cut(s) 48, 145, 1055, 1626, 1723, 2026
ApaI GGGCCC 1 cut(s) 1727
ApeKI GCWGC 2 cut(s) 1236, 1311
ApoI RAATTY 8 cut(s) 542, 689, 836, 1564, 1840, 2313, 2457, 2529
AseI ATTAAT 1 cut(s) 1149
AsiGI ACCGGT 1 cut(s) 1425
Asp700I GAANNNNTTC 1 cut(s) 1356
AsuC2I CCSGG 1 cut(s) 1561
AsuHPI GGTGA 2 cut(s) 320, 2059
AvaII GGWCC 8 cut(s) 355, 455, 602, 749, 896, 2064, 2128, 2597
BaeGI GKGCMC 1 cut(s) 1727
BalI TGGCCA 3 cut(s) 50, 1057, 2028
BanII GRGCYC 4 cut(s) 723, 1095, 1664, 1727
BarI GAAGNNNNNNTAC 2 cut(s) 1269, 1301
BauI CACGAG 1 cut(s) 2622
BbsI GAAGAC 2 cut(s) 1106, 1826
Bbv12I GWGCWC 3 cut(s) 723, 1095, 1664
BbvI GCAGC 2 cut(s) 1248, 1323
BccI CCATC 5 cut(s) 1969, 2371, 2621, 2663, 2725
BceAI ACGGC 1 cut(s) 1613
BciT130I CCWGG 4 cut(s) 47, 1119, 2684, 2789
BciVI GTATCC 1 cut(s) 1278
BcnI CCSGG 1 cut(s) 1561
BcoDI GTCTC 3 cut(s) 634, 2678, 2750
BfaI CTAG 4 cut(s) 1031, 1536, 2108, 2538
BfmI CTRYAG 1 cut(s) 1892
BfuI GTATCC 1 cut(s) 1278
BisI GCNGC 3 cut(s) 1237, 1312, 2740
BlsI GCNGC 3 cut(s) 1238, 1313, 2741
Bme1390I CCNGG 5 cut(s) 47, 1119, 1561, 2684, 2789
Bme18I GGWCC 8 cut(s) 355, 455, 602, 749, 896, 2064, 2128, 2597
BmiI GGNNCC 3 cut(s) 479, 773, 1725
BmrFI CCNGG 5 cut(s) 47, 1119, 1561, 2684, 2789
BmsI GCATC 4 cut(s) 262, 430, 724, 2551
BpiI GAAGAC 2 cut(s) 1106, 1826
BpmI CTGGAG 1 cut(s) 116
Bpu10I CCTNAGC 2 cut(s) 1094, 1658
BpuEI CTTGAG 5 cut(s) 1001, 1027, 1849, 2622, 2774
BpuMI CCSGG 1 cut(s) 1561
BsaBI GATNNNNATC 1 cut(s) 1671
BsaI GGTCTC 1 cut(s) 2678
BsaJI CCNNGG 3 cut(s) 1407, 1984, 2683
BsaWI WCCGGW 2 cut(s) 1425, 1964
Bsc4I CCNNNNNNNGG 8 cut(s) 305, 473, 474, 620, 767, 768, 914, 1432
Bse118I RCCGGY 1 cut(s) 1425
Bse1I ACTGG 5 cut(s) 133, 246, 1342, 1696, 2725
Bse3DI GCAATG 2 cut(s) 51, 2164
Bse8I GATNNNNATC 1 cut(s) 1671
BseBI CCWGG 4 cut(s) 47, 1119, 2684, 2789
BseDI CCNNGG 3 cut(s) 1407, 1984, 2683
BseGI GGATG 2 cut(s) 160, 2736
BseJI GATNNNNATC 1 cut(s) 1671
BseLI CCNNNNNNNGG 8 cut(s) 305, 473, 474, 620, 767, 768, 914, 1432
BseMI GCAATG 2 cut(s) 51, 2164
BseMII CTCAG 7 cut(s) 373, 548, 695, 842, 1108, 1380, 1649
BseNI ACTGG 5 cut(s) 133, 246, 1342, 1696, 2725
BseSI GKGCMC 1 cut(s) 1727
BseXI GCAGC 2 cut(s) 1248, 1323
BseYI CCCAGC 2 cut(s) 1726, 2707
BsgI GTGCAG 1 cut(s) 2864
Bsh1236I CGCG 1 cut(s) 1517
BshFI GGCC 6 cut(s) 50, 147, 1057, 1628, 1725, 2028
BshTI ACCGGT 1 cut(s) 1425
BsiHKAI GWGCWC 3 cut(s) 723, 1095, 1664
BsiSI CCGG 3 cut(s) 1426, 1560, 1965
BslI CCNNNNNNNGG 8 cut(s) 305, 473, 474, 620, 767, 768, 914, 1432
BsmAI GTCTC 3 cut(s) 634, 2678, 2750
BsmBI CGTCTC 1 cut(s) 634
BsmI GAATGC 3 cut(s) 19, 224, 2115
BsnI GGCC 6 cut(s) 50, 147, 1057, 1628, 1725, 2028
Bso31I GGTCTC 1 cut(s) 2678
Bsp120I GGGCCC 1 cut(s) 1723
Bsp1286I GDGCHC 4 cut(s) 723, 1095, 1664, 1727
Bsp1407I TGTACA 1 cut(s) 2829
Bsp143I GATC 6 cut(s) 502, 649, 796, 943, 1221, 1255
BspACI CCGC 5 cut(s) 1515, 2184, 2318, 2603, 2739
BspANI GGCC 6 cut(s) 50, 147, 1057, 1628, 1725, 2028
BspCNI CTCAG 7 cut(s) 372, 549, 696, 843, 1107, 1381, 1650
BspFNI CGCG 1 cut(s) 1517
BspHI TCATGA 1 cut(s) 2194
BspLI GGNNCC 3 cut(s) 479, 773, 1725
BspPI GGATC 1 cut(s) 1229
BspQI GCTCTTC 1 cut(s) 132
BspTNI GGTCTC 1 cut(s) 2678
BsrDI GCAATG 2 cut(s) 51, 2164
BsrFI RCCGGY 1 cut(s) 1425
BsrGI TGTACA 1 cut(s) 2829
BsrI ACTGG 5 cut(s) 133, 246, 1342, 1696, 2725
BssAI RCCGGY 1 cut(s) 1425
BssECI CCNNGG 3 cut(s) 1407, 1984, 2683
BssMI GATC 6 cut(s) 502, 649, 796, 943, 1221, 1255
BssSI CACGAG 1 cut(s) 2622
BssT1I CCWWGG 2 cut(s) 1407, 1984
Bst2BI CACGAG 1 cut(s) 2622
Bst2UI CCWGG 4 cut(s) 47, 1119, 2684, 2789
Bst4CI ACNGT 6 cut(s) 953, 1643, 1961, 2064, 2100, 2343
Bst6I CTCTTC 2 cut(s) 132, 1170
BstAPI GCANNNNNTGC 1 cut(s) 2471
BstAUI TGTACA 1 cut(s) 2829
BstC8I GCNNGC 5 cut(s) 123, 1073, 2113, 2159, 2476
BstF5I GGATG 2 cut(s) 160, 2736
BstFNI CGCG 1 cut(s) 1517
BstKTI GATC 6 cut(s) 505, 652, 799, 946, 1224, 1258
BstMAI GTCTC 3 cut(s) 634, 2678, 2750
BstMBI GATC 6 cut(s) 502, 649, 796, 943, 1221, 1255
BstMWI GCNNNNNNNGC 4 cut(s) 1722, 1884, 2471, 2639
BstNI CCWGG 4 cut(s) 47, 1119, 2684, 2789
BstNSI RCATGY 2 cut(s) 125, 1024
BstSCI CCNGG 5 cut(s) 45, 1117, 1559, 2682, 2787
BstSFI CTRYAG 1 cut(s) 1892
BstSLI GKGCMC 1 cut(s) 1727
BstUI CGCG 1 cut(s) 1517
BstV1I GCAGC 2 cut(s) 1248, 1323
BstV2I GAAGAC 2 cut(s) 1106, 1826
BstXI CCANNNNNNTGG 1 cut(s) 2450
BsuI GTATCC 1 cut(s) 1278
BsuRI GGCC 6 cut(s) 50, 147, 1057, 1628, 1725, 2028
BtsCI GGATG 2 cut(s) 160, 2736
BtsIMutI CAGTG 7 cut(s) 457, 604, 751, 898, 2096, 2704, 2718
Cac8I GCNNGC 5 cut(s) 123, 1073, 2113, 2159, 2476
CciI TCATGA 1 cut(s) 2194
Cfr10I RCCGGY 1 cut(s) 1425
Csp6I GTAC 4 cut(s) 1438, 1511, 1962, 2830
CspAI ACCGGT 1 cut(s) 1425
CviQI GTAC 4 cut(s) 1438, 1511, 1962, 2830
DpnI GATC 6 cut(s) 504, 651, 798, 945, 1223, 1257
DpnII GATC 6 cut(s) 502, 649, 796, 943, 1221, 1255
EaeI YGGCCR 4 cut(s) 48, 1055, 1626, 2026
Eam1104I CTCTTC 2 cut(s) 132, 1170
EarI CTCTTC 2 cut(s) 132, 1170
Ecl136II GAGCTC 3 cut(s) 721, 1093, 1662
Eco130I CCWWGG 2 cut(s) 1407, 1984
Eco147I AGGCCT 1 cut(s) 147
Eco24I GRGCYC 4 cut(s) 723, 1095, 1664, 1727
Eco31I GGTCTC 1 cut(s) 2678
Eco32I GATATC 2 cut(s) 341, 2448
Eco47I GGWCC 8 cut(s) 355, 455, 602, 749, 896, 2064, 2128, 2597
Eco53kI GAGCTC 3 cut(s) 721, 1093, 1662
Eco57I CTGAAG 1 cut(s) 312
EcoICRI GAGCTC 3 cut(s) 721, 1093, 1662
EcoRI GAATTC 2 cut(s) 1564, 2529
EcoRII CCWGG 4 cut(s) 45, 1117, 2682, 2787
EcoRV GATATC 2 cut(s) 341, 2448
EcoT14I CCWWGG 2 cut(s) 1407, 1984
EcoT22I ATGCAT 2 cut(s) 21, 277
EcoT38I GRGCYC 4 cut(s) 723, 1095, 1664, 1727
ErhI CCWWGG 2 cut(s) 1407, 1984
Esp3I CGTCTC 1 cut(s) 634
FauI CCCGC 1 cut(s) 1522
FauNDI CATATG 1 cut(s) 880
Fnu4HI GCNGC 3 cut(s) 1237, 1312, 2740
FokI GGATG 2 cut(s) 167, 2743
FriOI GRGCYC 4 cut(s) 723, 1095, 1664, 1727
Fsp4HI GCNGC 3 cut(s) 1237, 1312, 2740
FspBI CTAG 4 cut(s) 1031, 1536, 2108, 2538
GluI GCNGC 3 cut(s) 1237, 1312, 2740
GsaI CCCAGC 2 cut(s) 1730, 2711
GsuI CTGGAG 1 cut(s) 116
HaeIII GGCC 6 cut(s) 50, 147, 1057, 1628, 1725, 2028
HapII CCGG 3 cut(s) 1426, 1560, 1965
HincII GTYRAC 2 cut(s) 1326, 1981
HindII GTYRAC 2 cut(s) 1326, 1981
HindIII AAGCTT 2 cut(s) 1825, 2384
HpaII CCGG 3 cut(s) 1426, 1560, 1965
HphI GGTGA 2 cut(s) 320, 2059
Hpy188I TCNGA 8 cut(s) 558, 705, 852, 1351, 1666, 1839, 2355, 2783
HpyAV CCTTC 8 cut(s) 330, 518, 520, 665, 812, 1271, 1956, 2101
HpyCH4III ACNGT 6 cut(s) 953, 1643, 1961, 2064, 2100, 2343
HpyCH4IV ACGT 2 cut(s) 627, 1456
HpyF10VI GCNNNNNNNGC 4 cut(s) 1722, 1884, 2471, 2639
HpySE526I ACGT 2 cut(s) 627, 1456
Kzo9I GATC 6 cut(s) 502, 649, 796, 943, 1221, 1255
LguI GCTCTTC 1 cut(s) 132
LmnI GCTCC 2 cut(s) 92, 2630
Lsp1109I GCAGC 2 cut(s) 1248, 1323
LweI GCATC 4 cut(s) 262, 430, 724, 2551
MaeI CTAG 4 cut(s) 1031, 1536, 2108, 2538
MaeII ACGT 2 cut(s) 627, 1456
MaeIII GTNAC 4 cut(s) 241, 953, 2402, 2716
MalI GATC 6 cut(s) 504, 651, 798, 945, 1223, 1257
MboI GATC 6 cut(s) 502, 649, 796, 943, 1221, 1255
MfeI CAATTG 4 cut(s) 416, 563, 710, 857
MhlI GDGCHC 4 cut(s) 723, 1095, 1664, 1727
MlsI TGGCCA 3 cut(s) 50, 1057, 2028
MluNI TGGCCA 3 cut(s) 50, 1057, 2028
MlyI GAGTC 8 cut(s) 152, 421, 568, 715, 862, 1328, 1358, 1840
MmeI TCCRAC 3 cut(s) 61, 114, 2558
Mox20I TGGCCA 3 cut(s) 50, 1057, 2028
Mph1103I ATGCAT 2 cut(s) 21, 277
MroXI GAANNNNTTC 1 cut(s) 1356
MscI TGGCCA 3 cut(s) 50, 1057, 2028
Msp20I TGGCCA 3 cut(s) 50, 1057, 2028
MspA1I CMGCKG 1 cut(s) 2605
MspI CCGG 3 cut(s) 1426, 1560, 1965
MspR9I CCNGG 5 cut(s) 47, 1119, 1561, 2684, 2789
MunI CAATTG 4 cut(s) 416, 563, 710, 857
Mva1269I GAATGC 3 cut(s) 19, 224, 2115
MvaI CCWGG 4 cut(s) 47, 1119, 2684, 2789
MvnI CGCG 1 cut(s) 1517
MwoI GCNNNNNNNGC 4 cut(s) 1722, 1884, 2471, 2639
NciI CCSGG 1 cut(s) 1561
NdeI CATATG 1 cut(s) 880
NdeII GATC 6 cut(s) 502, 649, 796, 943, 1221, 1255
NlaIV GGNNCC 3 cut(s) 479, 773, 1725
NmuCI GTSAC 1 cut(s) 2716
NsiI ATGCAT 2 cut(s) 21, 277
NspI RCATGY 2 cut(s) 125, 1024
PaeI GCATGC 1 cut(s) 125
PagI TCATGA 1 cut(s) 2194
PceI AGGCCT 1 cut(s) 147
PciI ACATGT 1 cut(s) 1020
PciSI GCTCTTC 1 cut(s) 132
PctI GAATGC 3 cut(s) 19, 224, 2115
PdmI GAANNNNTTC 1 cut(s) 1356
PfoI TCCNGGA 2 cut(s) 1559, 2787
PinAI ACCGGT 1 cut(s) 1425
PkrI GCNGC 3 cut(s) 1238, 1313, 2741
PleI GAGTC 8 cut(s) 152, 420, 567, 714, 861, 1327, 1358, 1839
PpsI GAGTC 8 cut(s) 152, 420, 567, 714, 861, 1327, 1358, 1839
PscI ACATGT 1 cut(s) 1020
PshBI ATTAAT 1 cut(s) 1149
Psp124BI GAGCTC 3 cut(s) 723, 1095, 1664
Psp1406I AACGTT 1 cut(s) 1456
Psp6I CCWGG 4 cut(s) 45, 1117, 2682, 2787
PspFI CCCAGC 2 cut(s) 1726, 2707
PspGI CCWGG 4 cut(s) 45, 1117, 2682, 2787
PspN4I GGNNCC 3 cut(s) 479, 773, 1725
PspOMI GGGCCC 1 cut(s) 1723
RsaI GTAC 4 cut(s) 1439, 1512, 1963, 2831
RsaNI GTAC 4 cut(s) 1438, 1511, 1962, 2830
SacI GAGCTC 3 cut(s) 723, 1095, 1664
SapI GCTCTTC 1 cut(s) 132
SatI GCNGC 3 cut(s) 1237, 1312, 2740
Sau3AI GATC 6 cut(s) 502, 649, 796, 943, 1221, 1255
SchI GAGTC 8 cut(s) 152, 421, 568, 715, 862, 1328, 1358, 1840
ScrFI CCNGG 5 cut(s) 47, 1119, 1561, 2684, 2789
SduI GDGCHC 4 cut(s) 723, 1095, 1664, 1727
SfaNI GCATC 4 cut(s) 262, 430, 724, 2551
SfcI CTRYAG 1 cut(s) 1892
SinI GGWCC 8 cut(s) 355, 455, 602, 749, 896, 2064, 2128, 2597
SmlI CTYRAG 5 cut(s) 980, 1006, 1828, 2637, 2753
SmoI CTYRAG 5 cut(s) 980, 1006, 1828, 2637, 2753
SphI GCATGC 1 cut(s) 125
SseBI AGGCCT 1 cut(s) 147
SsiI CCGC 5 cut(s) 1515, 2184, 2318, 2603, 2739
SspI AATATT 3 cut(s) 1212, 2146, 2263
SspMI CTAG 4 cut(s) 1031, 1536, 2108, 2538
SstI GAGCTC 3 cut(s) 723, 1095, 1664
StuI AGGCCT 1 cut(s) 147
StyD4I CCNGG 5 cut(s) 45, 1117, 1559, 2682, 2787
StyI CCWWGG 2 cut(s) 1407, 1984
TaaI ACNGT 6 cut(s) 953, 1643, 1961, 2064, 2100, 2343
TaiI ACGT 2 cut(s) 630, 1459
TaqI TCGA 1 cut(s) 1820
TatI WGTACW 1 cut(s) 2829
TauI GCSGC 1 cut(s) 2742
TscAI CASTG 7 cut(s) 457, 604, 751, 898, 2103, 2704, 2725
TseFI GTSAC 1 cut(s) 2716
TseI GCWGC 2 cut(s) 1236, 1311
Tsp45I GTSAC 1 cut(s) 2716
TspDTI ATGAA 5 cut(s) 388, 535, 682, 829, 2108
TspRI CASTG 7 cut(s) 457, 604, 751, 898, 2103, 2704, 2725
VpaK11BI GGWCC 8 cut(s) 355, 455, 602, 749, 896, 2064, 2128, 2597
VspI ATTAAT 1 cut(s) 1149
XapI RAATTY 8 cut(s) 542, 689, 836, 1564, 1840, 2313, 2457, 2529
XbaI TCTAGA 1 cut(s) 1030
XceI RCATGY 2 cut(s) 125, 1024
XmnI GAANNNNTTC 1 cut(s) 1356
XspI CTAG 4 cut(s) 1031, 1536, 2108, 2538
Zsp2I ATGCAT 2 cut(s) 21, 277
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.