Rroxscaffold_3G00251270

Leucine Rich repeat

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
Physical Location & Seq
Forward (+)
45232098 .. 45233835
1738 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00251270.1

Sequence Viewer

Length: 1224 bp
ATGAGTGGTAGATCTATGCATTCTGTTTTGGTTGGGCTTATGTGCCTGGCCATTGCCTCTGCTATTTTTTGTTCTAGTGTTGGAAGATCCTACAACATTATGTGCTTGGAGAGTGAAAGGCAGGCTCTTCTACAATTCAAACAAGGCCTTGTGGATGAGTCCAATGCTCTTGCCTCTTGGAAAAGTGAGAAAGATTGCTGCAAGTGGAGAGGAATAGCATGCAATAACCAAACAAGTCATGTTACAGGTCTTAATTTCTCCTTTAGTTATGATTCATATTTCAATTATAGTGAAGTTCCTTTAAGAGGTGAAATGAGTCCTTCACTACTTGAATTACCATTTCTAAATTACTTGGACCTCAGTTATAATGATTTTGAAGGATTTGTGATTCCCAAGTTCATTGGCTCTTTGAGTCAATTGAAAGAACTCAAACTTGTACATGCTAATTTCAGTGGACTTGTTCCTCCCCAACTTGGAAACCTCTCTAATTTGCACACTCTTGATCTTTCCGGAACTATGATGCTATTTTGGGGGTCATGGCCAGATTTGGCACGATTTTCAAAGTTAAGAGAGTTACATCTTGGCAAAAATCAACTAAATGGGTCTGTACCCACGAGTGTCGGGCAACTCTCTAGCCTTGAACATCTATCTCGCTCGGGGAATTCTTTCACTGGTGTCATAACAGAATCCCACTTTCTGACCTCTCTCGATCGTTTACACTATTTGGATCTTTCTGGTAATCGTTTCTCTATCAACCTGAGCTCTGATTGGAATCCACCATTTCAACTTACTGGTCTGTTAGACATGCCCTCCTACAAGCTGGGCCTAGCTTTTCCCAAATGGATTCTAACGCAAACAAATCTTACTGGTCTTTATCTCTCTAATGCTGGACTATCAGGATCATTACCTAACAAGTTCTGGGATATATTTTCTGGCTTATTTCAGTTAGATCTCTCTATGAACCAAATCCATGGAAAACTACCGAATCTGTCAACAACGAGCTTGAGTAATGTTTATTTGTCTTCTAATCTACTTTCTGGTGCAGTGCCATCATTTTCTCCTGAGCTCAGAGAGTTGTATCTCTCGAATAACAAGTTTTCTGAGCCAATGTCTTGCTTCTGTGCAATGCAGGCTCCATATTTGGGTTTGATTGACATTTCTGAGAACCAAATGTCAGGAGAGCTTCCTAACTATTGGAAGCAATTCCAAGGATTGGAAAAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

407

Amino Acids

45.32

Weight (kDa)

5.99

Isoelectric Point (pI)

39.23

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 37 - 75 9.3e-14 Leucine rich repeat N-terminal domain
LRR_14 PF23598 104 - 219 2.8e-10 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000028)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g45420 FvH4_4g14031 FvH4_5g20780 FvH4_6g28530 FvH4_7g14020 FvH4_7g14030 FvH4_7g14040 FvH4_7g14050 FvH4_7g14060 FvH4_7g14070 FvH4_7g14090 FvH4_7g14110 FvH4_7g14140 FvH4_7g14450
malus_domestica MD00G1189100.v1.1 MD01G1018600.v1.1 MD01G1053800.v1.1 MD01G1053900.v1.1 MD01G1054000.v1.1 MD01G1054100.v1.1 MD01G1056700.v1.1 MD01G1057000.v1.1 MD01G1057300.v1.1 MD01G1057400.v1.1 MD01G1061600.v1.1 MD01G1061800.v1.1 MD01G1061900.v1.1 MD01G1062000.v1.1 MD01G1062400.v1.1 MD01G1062500.v1.1 MD01G1063200.v1.1 MD01G1063300.v1.1 MD01G1063400.v1.1 MD01G1063700.v1.1 MD01G1063900.v1.1 MD01G1064200.v1.1 MD01G1064300.v1.1 MD01G1064400.v1.1 MD01G1064600.v1.1 MD01G1064700.v1.1 MD01G1181100.v1.1 MD01G1212300.v1.1 MD01G1212500.v1.1 MD01G1212600.v1.1 MD02G1271900.v1.1 MD07G1136500.v1.1 MD07G1139300.v1.1 MD07G1141200.v1.1 MD07G1144700.v1.1 MD08G1144200.v1.1 MD14G1186300.v1.1 MD14G1186500.v1.1 MD14G1186700.v1.1 MD14G1186800.v1.1 MD15G1351300.v1.1 MD15G1439500.v1.1
prunus_persica Prupe.1G067000_v2.0.a1 Prupe.2G077400_v2.0.a1 Prupe.2G077700_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078600_v2.0.a1 Prupe.2G078800_v2.0.a1 Prupe.2G099600_v2.0.a1 Prupe.2G099700_v2.0.a1 Prupe.2G155100_v2.0.a1 Prupe.2G155500_v2.0.a1 Prupe.2G155600_v2.0.a1 Prupe.2G155800_v2.0.a1 Prupe.2G155900_v2.0.a1 Prupe.2G156100_v2.0.a1 Prupe.2G166100_v2.0.a1 Prupe.2G166300_v2.0.a1 Prupe.2G167500_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G168400_v2.0.a1 Prupe.2G168700_v2.0.a1 Prupe.2G168800_v2.0.a1 Prupe.2G169000_v2.0.a1 Prupe.2G169100_v2.0.a1 Prupe.2G169200_v2.0.a1 Prupe.2G169500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G172300_v2.0.a1 Prupe.2G304800_v2.0.a1 Prupe.4G264800_v2.0.a1 Prupe.4G265000_v2.0.a1 Prupe.5G051900_v2.0.a1 Prupe.5G052000_v2.0.a1
pyrus_communis pycom01g08380 pycom01g08430 pycom01g08490 pycom01g08520 pycom01g08540 pycom01g08550 pycom01g08600 pycom01g08630 pycom01g08660 pycom01g08720 pycom01g09180 pycom01g09200 pycom01g09210 pycom01g09270 pycom01g09280 pycom01g09300 pycom01g09380 pycom01g19110 pycom01g22260 pycom01g22310 pycom01g22330 pycom01g22350 pycom01g22360 pycom02g23250 pycom07g13420 pycom07g13670 pycom07g13900 pycom07g13910 pycom07g13960 pycom07g13970 pycom07g25680 pycom11g22830
rosa_chinensis RchiOBHm_Chr0c22g0500431 RchiOBHm_Chr0c22g0500441 RchiOBHm_Chr0c22g0500561 RchiOBHm_Chr0c22g0500571 RchiOBHm_Chr0c22g0500611 RchiOBHm_Chr0c22g0500621 RchiOBHm_Chr0c22g0500631 RchiOBHm_Chr0c22g0500681 RchiOBHm_Chr1g0348221 RchiOBHm_Chr1g0348251 RchiOBHm_Chr1g0352861 RchiOBHm_Chr1g0352871 RchiOBHm_Chr1g0352891 RchiOBHm_Chr1g0352901 RchiOBHm_Chr1g0354671 RchiOBHm_Chr1g0354701 RchiOBHm_Chr1g0354711 RchiOBHm_Chr1g0354751 RchiOBHm_Chr1g0354761 RchiOBHm_Chr1g0354841 RchiOBHm_Chr1g0354851 RchiOBHm_Chr1g0354881 RchiOBHm_Chr1g0354971 RchiOBHm_Chr1g0354981 RchiOBHm_Chr1g0354991 RchiOBHm_Chr1g0355001 RchiOBHm_Chr1g0355011 RchiOBHm_Chr1g0355021 RchiOBHm_Chr1g0355861 RchiOBHm_Chr1g0379671 RchiOBHm_Chr1g0379681 RchiOBHm_Chr2g0096591 RchiOBHm_Chr2g0132821 RchiOBHm_Chr3g0454901 RchiOBHm_Chr3g0472711 RchiOBHm_Chr4g0400791 RchiOBHm_Chr5g0069481 RchiOBHm_Chr5g0069511 RchiOBHm_Chr5g0069551 RchiOBHm_Chr6g0254651 RchiOBHm_Chr6g0259721 RchiOBHm_Chr7g0205911 RchiOBHm_Chr7g0206401 RchiOBHm_Chr7g0206571 RchiOBHm_Chr7g0206581 RchiOBHm_Chr7g0206621 RchiOBHm_Chr7g0206631 RchiOBHm_Chr7g0206641 RchiOBHm_Chr7g0206681 RchiOBHm_Chr7g0206691 RchiOBHm_Chr7g0206751 RchiOBHm_Chr7g0206761 RchiOBHm_Chr7g0206851 RchiOBHm_Chr7g0206911 RchiOBHm_Chr7g0206921 RchiOBHm_Chr7g0207001 RchiOBHm_Chr7g0207011 RchiOBHm_Chr7g0207031 RchiOBHm_Chr7g0207101 RchiOBHm_Chr7g0207161 RchiOBHm_Chr7g0207201 RchiOBHm_Chr7g0207271 RchiOBHm_Chr7g0207301 RchiOBHm_Chr7g0207311 RchiOBHm_Chr7g0207421 RchiOBHm_Chr7g0207481 RchiOBHm_Chr7g0207491 RchiOBHm_Chr7g0207501 RchiOBHm_Chr7g0207521 RchiOBHm_Chr7g0207531 RchiOBHm_Chr7g0207561 RchiOBHm_Chr7g0207571 RchiOBHm_Chr7g0207581 RchiOBHm_Chr7g0207601 RchiOBHm_Chr7g0207621 RchiOBHm_Chr7g0207631 RchiOBHm_Chr7g0207651 RchiOBHm_Chr7g0207661 RchiOBHm_Chr7g0207711 RchiOBHm_Chr7g0207761 RchiOBHm_Chr7g0207801 RchiOBHm_Chr7g0208821 RchiOBHm_Chr7g0208831 RchiOBHm_Chr7g0208841 RchiOBHm_Chr7g0213601 RchiOBHm_Chr7g0215981 RchiOBHm_Chr7g0216021
rosa_laevigata RLG00000003193 RLG00000003194 RLG00000003287 RLG00000003288 RLG00000003289 RLG00000003293 RLG00000003294 RLG00000003295 RLG00000003297 RLG00000003299 RLG00000003301 RLG00000003327 RLG00000003347 RLG00000016653 RLG00000018642 RLG00000018643 RLG00000019285 RLG00000022542 RLG00000026368 RLG00000026371 RLG00000028124 RLG00000028125 RLG00000028183 RLG00000028184 RLG00000028185 RLG00000028188 RLG00000028673 RLG00000029267 RLG00000029325 RLG00000029674 RLG00000032883 RLG00000036055 RLG00000036058 RLG00000036065 RLG00000036068 RLG00000036071 RLG00000036072 RLG00000036075 RLG00000036076
rosa_multiflora Rmu_co8250183.1_g000001 Rmu_co8271981.1_g000001 Rmu_co8410829.1_g000001 Rmu_co8432879.1_g000001 Rmu_co8441941.1_g000001 Rmu_sc0000076.1_g000031 Rmu_sc0000738.1_g000038 Rmu_sc0000848.1_g000003 Rmu_sc0000848.1_g000014 Rmu_sc0000848.1_g000015 Rmu_sc0000848.1_g000016 Rmu_sc0001264.1_g000001 Rmu_sc0002284.1_g000018 Rmu_sc0002356.1_g000011 Rmu_sc0003020.1_g000003 Rmu_sc0003115.1_g000001 Rmu_sc0003115.1_g000002 Rmu_sc0003115.1_g000003 Rmu_sc0003115.1_g000004 Rmu_sc0003115.1_g000005 Rmu_sc0003115.1_g000008 Rmu_sc0003115.1_g000010 Rmu_sc0003115.1_g000011 Rmu_sc0003115.1_g000014 Rmu_sc0003565.1_g000002 Rmu_sc0003652.1_g000013 Rmu_sc0003652.1_g000015 Rmu_sc0003652.1_g000016 Rmu_sc0003652.1_g000019 Rmu_sc0003940.1_g000001 Rmu_sc0003940.1_g000004 Rmu_sc0003940.1_g000009 Rmu_sc0004084.1_g000010 Rmu_sc0004705.1_g000021 Rmu_sc0004972.1_g000007 Rmu_sc0004987.1_g000002 Rmu_sc0004987.1_g000006 Rmu_sc0005065.1_g000018 Rmu_sc0005065.1_g000029 Rmu_sc0005391.1_g000002 Rmu_sc0005633.1_g000003 Rmu_sc0005633.1_g000008 Rmu_sc0006632.1_g000014 Rmu_sc0006632.1_g000018 Rmu_sc0006681.1_g000010 Rmu_sc0006681.1_g000011 Rmu_sc0006733.1_g000003 Rmu_sc0007385.1_g000005 Rmu_sc0007385.1_g000007 Rmu_sc0007385.1_g000009 Rmu_sc0007385.1_g000016 Rmu_sc0007645.1_g000002 Rmu_sc0007645.1_g000003 Rmu_sc0007645.1_g000022 Rmu_sc0007828.1_g000008 Rmu_sc0008509.1_g000003 Rmu_sc0008509.1_g000015 Rmu_sc0008509.1_g000016 Rmu_sc0008509.1_g000020 Rmu_sc0008509.1_g000030 Rmu_sc0008509.1_g000041 Rmu_sc0008756.1_g000001 Rmu_sc0008756.1_g000003 Rmu_sc0013028.1_g000002 Rmu_sc0013028.1_g000003 Rmu_sc0013028.1_g000005 Rmu_sc0013160.1_g000001 Rmu_sc0014454.1_g000009 Rmu_sc0014455.1_g000007 Rmu_sc0014659.1_g000004 Rmu_sc0017798.1_g000002 Rmu_sc0017798.1_g000004 Rmu_sc0029608.1_g000001 Rmu_sc0037861.1_g000001 Rmu_sc0038750.1_g000001 Rmu_sc0042995.1_g000001 Rmu_ssc0000161.1_g000017
rosa_roxburghii Rroxscaffold_1G00009180 Rroxscaffold_1G00009190 Rroxscaffold_1G00011450 Rroxscaffold_1G00011480 Rroxscaffold_2G00111660 Rroxscaffold_2G00113570 Rroxscaffold_2G00122140 Rroxscaffold_3G00243730 Rroxscaffold_3G00245750 Rroxscaffold_3G00245760 Rroxscaffold_3G00250220 Rroxscaffold_3G00251160 Rroxscaffold_3G00251270 Rroxscaffold_3G00251280 Rroxscaffold_3G00251300 Rroxscaffold_3G00251340 Rroxscaffold_3G00251350 Rroxscaffold_3G00251390 Rroxscaffold_3G00251400 Rroxscaffold_3G00251560 Rroxscaffold_3G00251570 Rroxscaffold_3G00251870 Rroxscaffold_3G00252200 Rroxscaffold_3G00252210 Rroxscaffold_4G00279970 Rroxscaffold_4G00299970 Rroxscaffold_4G00300760 Rroxscaffold_4G00300780 Rroxscaffold_4G00300810 Rroxscaffold_4G00300850 Rroxscaffold_4G00307080 Rroxscaffold_4G00307100 Rroxscaffold_4G00313990 Rroxscaffold_6G00405080
rosa_rugosa Rorug01G0193600 Rorug01G0193700 Rorug01G0243800 Rorug01G0244000 Rorug01G0244000 Rorug01G0244400 Rorug01G0414300.1 Rorug01G0414500 Rorug01G0414600 Rorug02G0235600 Rorug02G0307900 Rorug02G0583100 Rorug02G0583200 Rorug02G0583300 Rorug05G0398000 Rorug05G0398100 Rorug05G0398200 Rorug05G0580300 Rorug05G0590300 Rorug06G0116000 Rorug06G0116100 Rorug07G0096800 Rorug07G0097100.1 Rorug07G0097200 Rorug07G0098600 Rorug07G0098600 Rorug07G0098700 Rorug07G0099100 Rorug07G0106100 Rorug07G0106200 Rorug07G0106200 Rorug07G0106300 Rorug07G0157600 Rorug07G0157700 Rorug07G0157700 Rorug07G0157800
rosa_samantha Rh1AG255500 Rh1AG256700 Rh1BG225800 Rh1BG226200 Rh1BG230000 Rh1CG195300 Rh1CG238400 Rh1CG238500 Rh1CG238900 Rh1CG239000 Rh1CG239300 Rh1CG239400 Rh1CG239800 Rh1CG240000 Rh1CG240200 Rh1CG240300 Rh1CG244300 Rh1CG406900 Rh1CG407300 Rh1CG407400 Rh2CG343600 Rh2DG383200 Rh3BG205900 Rh4AG404400 Rh4BG415500 Rh5AG455200 Rh5AG455600 Rh5CG497000 Rh5CG497200 Rh7AG228800 Rh7AG230400 Rh7AG230800 Rh7AG231200 Rh7AG231600 Rh7AG231800 Rh7AG232100 Rh7AG241600 Rh7BG236200 Rh7CG238200 Rh7CG239100 Rh7CG243400 Rh7CG244900
rosa_wichuraiana Rw0G023040 Rw1G017780 Rw1G022320 Rw1G022340 Rw1G022410 Rw1G022420 Rw1G022440 Rw1G022460 Rw1G022490 Rw1G022500 Rw1G022530 Rw1G022550 Rw1G022560 Rw1G022600 Rw1G023060 Rw1G038150 Rw1G038160 Rw2G008210 Rw2G022350 Rw2G029290 Rw4G015050 Rw4G019850 Rw5G024060 Rw5G042460 Rw7G019160 Rw7G019460 Rw7G019690 Rw7G019830 Rw7G019860 Rw7G019880 Rw7G019890 Rw7G019930 Rw7G019990 Rw7G020460 Rw7G025100 Rw7G025120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 366
AccB7I CCANNNNNTGG 1 cut(s) 1213
AccIII TCCGGA 1 cut(s) 509
AclWI GGATC 3 cut(s) 81, 735, 907
AcoI YGGCCR 2 cut(s) 48, 539
AcsI RAATTY 1 cut(s) 661
AfaI GTAC 2 cut(s) 438, 609
AfiI CCNNNNNNNGG 4 cut(s) 305, 473, 1142, 1213
AgsI TTSAA 8 cut(s) 139, 283, 332, 377, 421, 561, 641, 785
AjnI CCWGG 1 cut(s) 45
AluBI AGCT 6 cut(s) 762, 820, 830, 1002, 1066, 1183
AluI AGCT 6 cut(s) 762, 820, 830, 1002, 1066, 1183
Alw21I GWGCWC 2 cut(s) 764, 1068
AlwI GGATC 3 cut(s) 81, 735, 907
Ama87I CYCGRG 1 cut(s) 655
Aor13HI TCCGGA 1 cut(s) 509
AoxI GGCC 4 cut(s) 48, 145, 539, 823
ApeKI GCWGC 1 cut(s) 198
ApoI RAATTY 1 cut(s) 661
Asp700I GAANNNNTTC 2 cut(s) 665, 1202
AspS9I GGNCC 2 cut(s) 355, 823
AsuHPI GGTGA 1 cut(s) 320
AvaI CYCGRG 1 cut(s) 655
AvaII GGWCC 1 cut(s) 355
BalI TGGCCA 2 cut(s) 50, 541
BanII GRGCYC 2 cut(s) 764, 1068
BauI CACGAG 1 cut(s) 613
BbsI GAAGAC 1 cut(s) 1014
Bbv12I GWGCWC 2 cut(s) 764, 1068
BbvI GCAGC 1 cut(s) 185
BccI CCATC 1 cut(s) 1057
BciT130I CCWGG 1 cut(s) 47
BfaI CTAG 3 cut(s) 75, 633, 827
BglII AGATCT 2 cut(s) 11, 949
BisI GCNGC 1 cut(s) 199
BlsI GCNGC 1 cut(s) 200
Bme1390I CCNGG 1 cut(s) 47
Bme18I GGWCC 1 cut(s) 355
BmeT110I CYCGRG 1 cut(s) 655
BmgT120I GGNCC 2 cut(s) 355, 823
BmiI GGNNCC 1 cut(s) 1134
BmrFI CCNGG 1 cut(s) 47
BmsI GCATC 1 cut(s) 510
BpiI GAAGAC 1 cut(s) 1014
Bpu10I CCTNAGC 2 cut(s) 758, 1062
BpuEI CTTGAG 1 cut(s) 1024
BsaBI GATNNNNATC 1 cut(s) 771
BsaJI CCNNGG 2 cut(s) 970, 1207
BsaWI WCCGGW 1 cut(s) 509
BsaXI ACNNNNNCTCC 2 cut(s) 794, 824
Bsc4I CCNNNNNNNGG 4 cut(s) 305, 473, 1142, 1213
Bse1I ACTGG 3 cut(s) 676, 796, 871
Bse3DI GCAATG 2 cut(s) 51, 1131
Bse8I GATNNNNATC 1 cut(s) 771
BseAI TCCGGA 1 cut(s) 509
BseBI CCWGG 1 cut(s) 47
BseDI CCNNGG 2 cut(s) 970, 1207
BseGI GGATG 1 cut(s) 160
BseJI GATNNNNATC 1 cut(s) 771
BseLI CCNNNNNNNGG 4 cut(s) 305, 473, 1142, 1213
BseMI GCAATG 2 cut(s) 51, 1131
BseMII CTCAG 6 cut(s) 373, 749, 1053, 1081, 1092, 1152
BseNI ACTGG 3 cut(s) 676, 796, 871
BseXI GCAGC 1 cut(s) 185
BseYI CCCAGC 1 cut(s) 820
BsgI GTGCAG 1 cut(s) 1062
Bsh1285I CGRYCG 1 cut(s) 712
BshFI GGCC 4 cut(s) 50, 147, 541, 825
BsiEI CGRYCG 1 cut(s) 712
BsiHKAI GWGCWC 2 cut(s) 764, 1068
BsiHKCI CYCGRG 1 cut(s) 655
BsiSI CCGG 1 cut(s) 510
BslI CCNNNNNNNGG 4 cut(s) 305, 473, 1142, 1213
BsmI GAATGC 1 cut(s) 19
BsnI GGCC 4 cut(s) 50, 147, 541, 825
BsoBI CYCGRG 1 cut(s) 655
Bsp1286I GDGCHC 2 cut(s) 764, 1068
Bsp13I TCCGGA 1 cut(s) 509
Bsp1407I TGTACA 1 cut(s) 436
Bsp143I GATC 7 cut(s) 11, 86, 502, 709, 727, 899, 949
Bsp19I CCATGG 1 cut(s) 970
BspANI GGCC 4 cut(s) 50, 147, 541, 825
BspCNI CTCAG 6 cut(s) 372, 750, 1054, 1080, 1093, 1153
BspEI TCCGGA 1 cut(s) 509
BspLI GGNNCC 1 cut(s) 1134
BspPI GGATC 3 cut(s) 81, 735, 907
BspQI GCTCTTC 1 cut(s) 132
BsrDI GCAATG 2 cut(s) 51, 1131
BsrGI TGTACA 1 cut(s) 436
BsrI ACTGG 3 cut(s) 676, 796, 871
BssECI CCNNGG 2 cut(s) 970, 1207
BssMI GATC 7 cut(s) 11, 86, 502, 709, 727, 899, 949
BssSI CACGAG 1 cut(s) 613
BssT1I CCWWGG 2 cut(s) 970, 1207
Bst2BI CACGAG 1 cut(s) 613
Bst2UI CCWGG 1 cut(s) 47
Bst6I CTCTTC 1 cut(s) 132
BstAUI TGTACA 1 cut(s) 436
BstC8I GCNNGC 3 cut(s) 123, 220, 1131
BstDEI CTNAG 6 cut(s) 359, 758, 1062, 1067, 1101, 1161
BstDSI CCRYGG 1 cut(s) 970
BstENI CCTNNNNNAGG 1 cut(s) 303
BstF5I GGATG 1 cut(s) 160
BstKTI GATC 7 cut(s) 14, 89, 505, 712, 730, 902, 952
BstMBI GATC 7 cut(s) 11, 86, 502, 709, 727, 899, 949
BstMCI CGRYCG 1 cut(s) 712
BstMWI GCNNNNNNNGC 1 cut(s) 1130
BstNI CCWGG 1 cut(s) 47
BstNSI RCATGY 3 cut(s) 222, 443, 808
BstSCI CCNGG 1 cut(s) 45
BstV1I GCAGC 1 cut(s) 185
BstV2I GAAGAC 1 cut(s) 1014
BstX2I RGATCY 4 cut(s) 11, 86, 727, 949
BstXI CCANNNNNNTGG 1 cut(s) 971
BstYI RGATCY 4 cut(s) 11, 86, 727, 949
BsuRI GGCC 4 cut(s) 50, 147, 541, 825
BtgI CCRYGG 1 cut(s) 970
BtsCI GGATG 1 cut(s) 160
BtsI GCAGTG 1 cut(s) 1050
BtsIMutI CAGTG 3 cut(s) 457, 669, 1050
Cac8I GCNNGC 3 cut(s) 123, 220, 1131
Cfr13I GGNCC 2 cut(s) 355, 823
Csp6I GTAC 2 cut(s) 437, 608
CviAII CATG 6 cut(s) 219, 239, 440, 537, 805, 971
CviQI GTAC 2 cut(s) 437, 608
DdeI CTNAG 6 cut(s) 359, 758, 1062, 1067, 1101, 1161
DpnI GATC 7 cut(s) 13, 88, 504, 711, 729, 901, 951
DpnII GATC 7 cut(s) 11, 86, 502, 709, 727, 899, 949
EaeI YGGCCR 2 cut(s) 48, 539
Eam1104I CTCTTC 1 cut(s) 132
EarI CTCTTC 1 cut(s) 132
Ecl136II GAGCTC 2 cut(s) 762, 1066
Eco130I CCWWGG 2 cut(s) 970, 1207
Eco147I AGGCCT 1 cut(s) 147
Eco24I GRGCYC 2 cut(s) 764, 1068
Eco47I GGWCC 1 cut(s) 355
Eco53kI GAGCTC 2 cut(s) 762, 1066
Eco88I CYCGRG 1 cut(s) 655
EcoICRI GAGCTC 2 cut(s) 762, 1066
EcoNI CCTNNNNNAGG 1 cut(s) 303
EcoRI GAATTC 1 cut(s) 661
EcoRII CCWGG 1 cut(s) 45
EcoT14I CCWWGG 2 cut(s) 970, 1207
EcoT22I ATGCAT 1 cut(s) 21
EcoT38I GRGCYC 2 cut(s) 764, 1068
ErhI CCWWGG 2 cut(s) 970, 1207
FaeI CATG 6 cut(s) 222, 242, 443, 540, 808, 974
FatI CATG 6 cut(s) 218, 238, 439, 536, 804, 970
Fnu4HI GCNGC 1 cut(s) 199
FokI GGATG 1 cut(s) 167
FriOI GRGCYC 2 cut(s) 764, 1068
Fsp4HI GCNGC 1 cut(s) 199
FspBI CTAG 3 cut(s) 75, 633, 827
GluI GCNGC 1 cut(s) 199
GsaI CCCAGC 1 cut(s) 824
HaeIII GGCC 4 cut(s) 50, 147, 541, 825
HapII CCGG 1 cut(s) 510
Hin1II CATG 6 cut(s) 222, 242, 443, 540, 808, 974
HincII GTYRAC 1 cut(s) 993
HindII GTYRAC 1 cut(s) 993
HinfI GANTC 9 cut(s) 158, 272, 316, 388, 412, 686, 772, 844, 985
HpaII CCGG 1 cut(s) 510
HphI GGTGA 1 cut(s) 320
Hpy166II GTNNAC 3 cut(s) 455, 716, 993
Hpy188I TCNGA 5 cut(s) 699, 766, 1070, 1102, 1162
Hpy188III TCNNGA 7 cut(s) 500, 510, 707, 897, 1061, 1084, 1176
Hpy8I GTNNAC 3 cut(s) 455, 716, 993
HpyAV CCTTC 2 cut(s) 330, 371
HpyCH4V TGCA 7 cut(s) 19, 201, 222, 493, 1043, 1124, 1129
HpyF10VI GCNNNNNNNGC 1 cut(s) 1130
HpyF3I CTNAG 6 cut(s) 359, 758, 1062, 1067, 1101, 1161
Hsp92II CATG 6 cut(s) 222, 242, 443, 540, 808, 974
Kpn2I TCCGGA 1 cut(s) 509
Kzo9I GATC 7 cut(s) 11, 86, 502, 709, 727, 899, 949
LguI GCTCTTC 1 cut(s) 132
LmnI GCTCC 1 cut(s) 1138
Lsp1109I GCAGC 1 cut(s) 185
LweI GCATC 1 cut(s) 510
MaeI CTAG 3 cut(s) 75, 633, 827
MaeIII GTNAC 2 cut(s) 241, 573
MalI GATC 7 cut(s) 13, 88, 504, 711, 729, 901, 951
MboI GATC 7 cut(s) 11, 86, 502, 709, 727, 899, 949
MboII GAAGA 3 cut(s) 96, 119, 1014
MfeI CAATTG 1 cut(s) 416
MflI RGATCY 4 cut(s) 11, 86, 727, 949
MhlI GDGCHC 2 cut(s) 764, 1068
MlsI TGGCCA 2 cut(s) 50, 541
MluNI TGGCCA 2 cut(s) 50, 541
MlyI GAGTC 3 cut(s) 167, 325, 421
MmeI TCCRAC 1 cut(s) 61
MnlI CCTC 9 cut(s) 67, 184, 203, 299, 368, 474, 491, 712, 820
Mox20I TGGCCA 2 cut(s) 50, 541
Mph1103I ATGCAT 1 cut(s) 21
MroI TCCGGA 1 cut(s) 509
MroXI GAANNNNTTC 2 cut(s) 665, 1202
MscI TGGCCA 2 cut(s) 50, 541
MseI TTAA 3 cut(s) 252, 302, 566
Msp20I TGGCCA 2 cut(s) 50, 541
MspI CCGG 1 cut(s) 510
MspR9I CCNGG 1 cut(s) 47
MunI CAATTG 1 cut(s) 416
Mva1269I GAATGC 1 cut(s) 19
MvaI CCWGG 1 cut(s) 47
MwoI GCNNNNNNNGC 1 cut(s) 1130
NcoI CCATGG 1 cut(s) 970
NdeII GATC 7 cut(s) 11, 86, 502, 709, 727, 899, 949
NlaIII CATG 6 cut(s) 222, 242, 443, 540, 808, 974
NlaIV GGNNCC 1 cut(s) 1134
NsiI ATGCAT 1 cut(s) 21
NspI RCATGY 3 cut(s) 222, 443, 808
PaeI GCATGC 1 cut(s) 222
PceI AGGCCT 1 cut(s) 147
PciSI GCTCTTC 1 cut(s) 132
PctI GAATGC 1 cut(s) 19
PdmI GAANNNNTTC 2 cut(s) 665, 1202
PfeI GAWTC 6 cut(s) 272, 388, 686, 772, 844, 985
PflMI CCANNNNNTGG 1 cut(s) 1213
PkrI GCNGC 1 cut(s) 200
Ple19I CGATCG 1 cut(s) 712
PleI GAGTC 3 cut(s) 166, 324, 420
PpsI GAGTC 3 cut(s) 166, 324, 420
PsiI TTATAA 1 cut(s) 366
Psp124BI GAGCTC 2 cut(s) 764, 1068
Psp6I CCWGG 1 cut(s) 45
PspFI CCCAGC 1 cut(s) 820
PspGI CCWGG 1 cut(s) 45
PspN4I GGNNCC 1 cut(s) 1134
PspPI GGNCC 2 cut(s) 355, 823
PsuI RGATCY 4 cut(s) 11, 86, 727, 949
PvuI CGATCG 1 cut(s) 712
RsaI GTAC 2 cut(s) 438, 609
RsaNI GTAC 2 cut(s) 437, 608
SacI GAGCTC 2 cut(s) 764, 1068
SapI GCTCTTC 1 cut(s) 132
SaqAI TTAA 3 cut(s) 252, 302, 566
SatI GCNGC 1 cut(s) 199
Sau3AI GATC 7 cut(s) 11, 86, 502, 709, 727, 899, 949
Sau96I GGNCC 2 cut(s) 355, 823
SchI GAGTC 3 cut(s) 167, 325, 421
ScrFI CCNGG 1 cut(s) 47
SduI GDGCHC 2 cut(s) 764, 1068
SfaNI GCATC 1 cut(s) 510
SinI GGWCC 1 cut(s) 355
SmlI CTYRAG 1 cut(s) 1003
SmoI CTYRAG 1 cut(s) 1003
SphI GCATGC 1 cut(s) 222
SseBI AGGCCT 1 cut(s) 147
SspMI CTAG 3 cut(s) 75, 633, 827
SstI GAGCTC 2 cut(s) 764, 1068
StuI AGGCCT 1 cut(s) 147
StyD4I CCNGG 1 cut(s) 45
StyI CCWWGG 2 cut(s) 970, 1207
TaqI TCGA 2 cut(s) 708, 1085
TatI WGTACW 1 cut(s) 436
TfiI GAWTC 6 cut(s) 272, 388, 686, 772, 844, 985
Tru1I TTAA 3 cut(s) 252, 302, 566
Tru9I TTAA 3 cut(s) 252, 302, 566
TscAI CASTG 3 cut(s) 457, 676, 1050
TseI GCWGC 1 cut(s) 198
TspDTI ATGAA 3 cut(s) 264, 388, 974
TspRI CASTG 3 cut(s) 457, 676, 1050
Van91I CCANNNNNTGG 1 cut(s) 1213
VpaK11BI GGWCC 1 cut(s) 355
XagI CCTNNNNNAGG 1 cut(s) 303
XapI RAATTY 1 cut(s) 661
XceI RCATGY 3 cut(s) 222, 443, 808
XmnI GAANNNNTTC 2 cut(s) 665, 1202
XspI CTAG 3 cut(s) 75, 633, 827
Zsp2I ATGCAT 1 cut(s) 21
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.