Rw7G019830

Leucine Rich repeat

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
Physical Location & Seq
Reverse (-)
22065515 .. 22068196
2682 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G019830.1

Sequence Viewer

Length: 2682 bp
ATGATCATTCCCAAGTTCATTGGCTCTATGAGTCAATTGAAAGAACTCAAACTTGCAAGTGCTAATTTCAATAGACCTGTTCCTCCCCAACTTGGAAACCTCTCTAACTTGCACACTCTTGATCTTTCCTACAATGATTTTGGAGGAATGATCATTCCCAAGTTCATTGGCTCTTTGAGTCAATTGAAGGAACTCAAACTTGCAACTGCTGATTTCAGTGGACCTGTTCCTCCCCAACTTGGAAACCTCTCTAATTTGCACACTCTTGATCTTTCCTACAATGATTTTGAAGGAATGATGATTCCCAAATTCATTGGCTCTCTGAGTCAATTGAAAGAACTCAAACTTGCATATGCTAATTTCAGAGGACCTGTTCCTCCCCAGCTTGGAAACCTTTCTAATTTGCACACTCTTGATCTTTGCGGTACCAAAGTTGTTAGTTCAGAAAATCTTGAGTGGTTATCTCATCTTTCTTCCTTGAGATACCTGAAAATGTCATGGCTGAATTTGTCTGAGGCTGTGAATTGGCCACAATCTTTAAGCAAACTCACTTTACTGACAGAGCTTCAGTTATCTTCCTGTGATCTTCCTGATGTCAATTTATCACTTTCCTTTATTAATTCTTCCACCTCTCTTCAACTGCTTGACCTCTCTCTCAATCATCTTAATTCTTCAATATTTTATTGGATAGCCAATGTCAGCAGCAACTTTGTCCATATTGGTCTCTCTTCCAACAATCTTAAAGGTCCTATCCCAGATGTCTTCACAAGCATGCTTTCTCTAGTAAAACTAGATCTGTCTTGGAATAAACTTGAAGGTGGGATACCAAAAGGCTTTCAAAACTTATGCAGCTTAGAGTCGCTGTACTTATCCCCAAACCAGTTGTCTGAAAACATTGAGGACTCTGTTGAAACCTTGTCTTGTGCTGAGAACACACTTCAGACCTTGGACTTGAGTGATAACCTGTTTTGGGGGTCGTTGCCAGATTTGTCACGTTTTTCAAAGTTAAGAGAGTTATATCTTGCCAACAATCAACTAAATGGGTCTGTACCCGAGAGTGTCGGGCAACTCTCTAGCCTTGAAACATTATTTCTCTCCGGGAATTCTTTGAGTGGTGTCATAACAGAGGCCCACTTTTTGAACCTCTCTCGTTTACAATATTTGGATATTTCTGGTAATCGTTTCTCTATCAACCTGAGCTCTGATTGGAATCCACCATTTCAACTTCATTGGTTAGAGATGTCCTCTTGCAAGGTGGGCGCAGCTTTTCCCAAGTGGATTCTAACGCAGACAAATCTTACTACTCTTTGTCTCTCTAATGCTGGTCTATCAGGATCATTACCTAATAAGTTTTGGGATCTATTTTCTGGCTTAGATTGGCTAGATCTCTCTATGAACCAAATCCATGGAAAACTGCCGAATCTGTCATCGACAAGCTTGGGTCTTCTCAACTTGTCTTCTAATCTATTTTCTGGCGCATTGCCATCATTTTCTCCTATGCTTAGGGATTTGTATCTCTCGAATAATAGGTTTTCAGGACCTTTGTCTTCCTCATGTGCAACGCAGTCTCCAGATTTAAGTTATGTTGACATTTCTAAGAACCTATTGTCTGGGGAGCTTCCTAATTGTTGGATGCAATTTCAAAATTTGTATCTATTCAATTTGGGAAAGAATAAATTATCTGGAAAAATACCAAGCTCGTTAGGCAATCTACAGGGAATTGGGATATTGCATTTACATGATAACAACTTTTCAGGAGAATTGCCTTCTTTAGAGAACTGTACCCGATTATTGATAGTTGACCTTGGCAACAATAAGTTGTCAGGAAAGATACCAACATGGATTGGCCAAAGCCTACCAAAATTGTTGACTCTACGCTTACGGTCAAATGAGTTTAATGGAATCATACCCTTCTCCCTGTGCGGTCTAGCTGCCATTCATGTTTTGGACCTCTCTCACAACAATATTTCAGGAGGCTTGCCACATTGCTTCAATAACATAACCGCATTGGCTAATGATACTGGAGTTGGTGAAATTGTGGAACTTGTGTGGAAAGGAATAGAAAGAGAGTTTCCCAATCTTATAGGTATGAGAAGCATTGACATTTCAAGCAACTATTTGATTGGGGAAATTCCGCCAAGTATAGCAAGTATGACAGAGTTGATTTCTCTGAACTTGTCTAGAAACAAATTGACGGGAAAGCTTCCTGAAGACTTTGGTAACTTGAAGATGTTGGAATCTCTTGATTTGTCAAGAAACCGGATATCTGGTAAAATTCCTACAAGTTTTGCGAGCTTAAACTTTCTTAGTGTCTTGGACTTATCACACAACAACTTGTCAGGAAGAATTCCATCAGGCACCCAACTTCAGGGTTTTAATGCTTCTGCATATATGGGAAATCATGGACTTTGTGGACCACCGCTGACACCAAATTGCTCACCAGATGGAGCAACTCAAGCTGATGATAACAAAGAACATGATAATGATGGTCTCATAAGCCTGGGATTTTTTATCAGTGCTGTGCTGGGATTCGTCACTGGATTTTGGATGGTCTGCGGCAGTTTACTGCTTAAGACTTCTTGGAGATATGCTTATTTCAGATTCCTGGACAATGCAAAAGATTGGATTTATGTCAAAACCGCTGTGTACAAGGCAAAAGTGCAAAGGAGACTTCAAAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

893

Amino Acids

98.21

Weight (kDa)

6.12

Isoelectric Point (pI)

36.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 54 - 281 3.5e-16 Leucine-rich repeat region
LRR_8 PF13855 240 - 295 7.4e-08 Leucine rich repeat
LRR_8 PF13855 312 - 370 5.2e-07 Leucine rich repeat
LRR_8 PF13855 335 - 395 8.6e-10 Leucine rich repeat
LRR_8 PF13855 596 - 656 1.5e-06 Leucine rich repeat
LRR_8 PF13855 697 - 755 1.4e-10 Leucine rich repeat
LRR_8 PF13855 739 - 779 6e-07 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000028)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g45420 FvH4_4g14031 FvH4_5g20780 FvH4_6g28530 FvH4_7g14020 FvH4_7g14030 FvH4_7g14040 FvH4_7g14050 FvH4_7g14060 FvH4_7g14070 FvH4_7g14090 FvH4_7g14110 FvH4_7g14140 FvH4_7g14450
malus_domestica MD00G1189100.v1.1 MD01G1018600.v1.1 MD01G1053800.v1.1 MD01G1053900.v1.1 MD01G1054000.v1.1 MD01G1054100.v1.1 MD01G1056700.v1.1 MD01G1057000.v1.1 MD01G1057300.v1.1 MD01G1057400.v1.1 MD01G1061600.v1.1 MD01G1061800.v1.1 MD01G1061900.v1.1 MD01G1062000.v1.1 MD01G1062400.v1.1 MD01G1062500.v1.1 MD01G1063200.v1.1 MD01G1063300.v1.1 MD01G1063400.v1.1 MD01G1063700.v1.1 MD01G1063900.v1.1 MD01G1064200.v1.1 MD01G1064300.v1.1 MD01G1064400.v1.1 MD01G1064600.v1.1 MD01G1064700.v1.1 MD01G1181100.v1.1 MD01G1212300.v1.1 MD01G1212500.v1.1 MD01G1212600.v1.1 MD02G1271900.v1.1 MD07G1136500.v1.1 MD07G1139300.v1.1 MD07G1141200.v1.1 MD07G1144700.v1.1 MD08G1144200.v1.1 MD14G1186300.v1.1 MD14G1186500.v1.1 MD14G1186700.v1.1 MD14G1186800.v1.1 MD15G1351300.v1.1 MD15G1439500.v1.1
prunus_persica Prupe.1G067000_v2.0.a1 Prupe.2G077400_v2.0.a1 Prupe.2G077700_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078600_v2.0.a1 Prupe.2G078800_v2.0.a1 Prupe.2G099600_v2.0.a1 Prupe.2G099700_v2.0.a1 Prupe.2G155100_v2.0.a1 Prupe.2G155500_v2.0.a1 Prupe.2G155600_v2.0.a1 Prupe.2G155800_v2.0.a1 Prupe.2G155900_v2.0.a1 Prupe.2G156100_v2.0.a1 Prupe.2G166100_v2.0.a1 Prupe.2G166300_v2.0.a1 Prupe.2G167500_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G168400_v2.0.a1 Prupe.2G168700_v2.0.a1 Prupe.2G168800_v2.0.a1 Prupe.2G169000_v2.0.a1 Prupe.2G169100_v2.0.a1 Prupe.2G169200_v2.0.a1 Prupe.2G169500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G172300_v2.0.a1 Prupe.2G304800_v2.0.a1 Prupe.4G264800_v2.0.a1 Prupe.4G265000_v2.0.a1 Prupe.5G051900_v2.0.a1 Prupe.5G052000_v2.0.a1
pyrus_communis pycom01g08380 pycom01g08430 pycom01g08490 pycom01g08520 pycom01g08540 pycom01g08550 pycom01g08600 pycom01g08630 pycom01g08660 pycom01g08720 pycom01g09180 pycom01g09200 pycom01g09210 pycom01g09270 pycom01g09280 pycom01g09300 pycom01g09380 pycom01g19110 pycom01g22260 pycom01g22310 pycom01g22330 pycom01g22350 pycom01g22360 pycom02g23250 pycom07g13420 pycom07g13670 pycom07g13900 pycom07g13910 pycom07g13960 pycom07g13970 pycom07g25680 pycom11g22830
rosa_chinensis RchiOBHm_Chr0c22g0500431 RchiOBHm_Chr0c22g0500441 RchiOBHm_Chr0c22g0500561 RchiOBHm_Chr0c22g0500571 RchiOBHm_Chr0c22g0500611 RchiOBHm_Chr0c22g0500621 RchiOBHm_Chr0c22g0500631 RchiOBHm_Chr0c22g0500681 RchiOBHm_Chr1g0348221 RchiOBHm_Chr1g0348251 RchiOBHm_Chr1g0352861 RchiOBHm_Chr1g0352871 RchiOBHm_Chr1g0352891 RchiOBHm_Chr1g0352901 RchiOBHm_Chr1g0354671 RchiOBHm_Chr1g0354701 RchiOBHm_Chr1g0354711 RchiOBHm_Chr1g0354751 RchiOBHm_Chr1g0354761 RchiOBHm_Chr1g0354841 RchiOBHm_Chr1g0354851 RchiOBHm_Chr1g0354881 RchiOBHm_Chr1g0354971 RchiOBHm_Chr1g0354981 RchiOBHm_Chr1g0354991 RchiOBHm_Chr1g0355001 RchiOBHm_Chr1g0355011 RchiOBHm_Chr1g0355021 RchiOBHm_Chr1g0355861 RchiOBHm_Chr1g0379671 RchiOBHm_Chr1g0379681 RchiOBHm_Chr2g0096591 RchiOBHm_Chr2g0132821 RchiOBHm_Chr3g0454901 RchiOBHm_Chr3g0472711 RchiOBHm_Chr4g0400791 RchiOBHm_Chr5g0069481 RchiOBHm_Chr5g0069511 RchiOBHm_Chr5g0069551 RchiOBHm_Chr6g0254651 RchiOBHm_Chr6g0259721 RchiOBHm_Chr7g0205911 RchiOBHm_Chr7g0206401 RchiOBHm_Chr7g0206571 RchiOBHm_Chr7g0206581 RchiOBHm_Chr7g0206621 RchiOBHm_Chr7g0206631 RchiOBHm_Chr7g0206641 RchiOBHm_Chr7g0206681 RchiOBHm_Chr7g0206691 RchiOBHm_Chr7g0206751 RchiOBHm_Chr7g0206761 RchiOBHm_Chr7g0206851 RchiOBHm_Chr7g0206911 RchiOBHm_Chr7g0206921 RchiOBHm_Chr7g0207001 RchiOBHm_Chr7g0207011 RchiOBHm_Chr7g0207031 RchiOBHm_Chr7g0207101 RchiOBHm_Chr7g0207161 RchiOBHm_Chr7g0207201 RchiOBHm_Chr7g0207271 RchiOBHm_Chr7g0207301 RchiOBHm_Chr7g0207311 RchiOBHm_Chr7g0207421 RchiOBHm_Chr7g0207481 RchiOBHm_Chr7g0207491 RchiOBHm_Chr7g0207501 RchiOBHm_Chr7g0207521 RchiOBHm_Chr7g0207531 RchiOBHm_Chr7g0207561 RchiOBHm_Chr7g0207571 RchiOBHm_Chr7g0207581 RchiOBHm_Chr7g0207601 RchiOBHm_Chr7g0207621 RchiOBHm_Chr7g0207631 RchiOBHm_Chr7g0207651 RchiOBHm_Chr7g0207661 RchiOBHm_Chr7g0207711 RchiOBHm_Chr7g0207761 RchiOBHm_Chr7g0207801 RchiOBHm_Chr7g0208821 RchiOBHm_Chr7g0208831 RchiOBHm_Chr7g0208841 RchiOBHm_Chr7g0213601 RchiOBHm_Chr7g0215981 RchiOBHm_Chr7g0216021
rosa_laevigata RLG00000003193 RLG00000003194 RLG00000003287 RLG00000003288 RLG00000003289 RLG00000003293 RLG00000003294 RLG00000003295 RLG00000003297 RLG00000003299 RLG00000003301 RLG00000003327 RLG00000003347 RLG00000016653 RLG00000018642 RLG00000018643 RLG00000019285 RLG00000022542 RLG00000026368 RLG00000026371 RLG00000028124 RLG00000028125 RLG00000028183 RLG00000028184 RLG00000028185 RLG00000028188 RLG00000028673 RLG00000029267 RLG00000029325 RLG00000029674 RLG00000032883 RLG00000036055 RLG00000036058 RLG00000036065 RLG00000036068 RLG00000036071 RLG00000036072 RLG00000036075 RLG00000036076
rosa_multiflora Rmu_co8250183.1_g000001 Rmu_co8271981.1_g000001 Rmu_co8410829.1_g000001 Rmu_co8432879.1_g000001 Rmu_co8441941.1_g000001 Rmu_sc0000076.1_g000031 Rmu_sc0000738.1_g000038 Rmu_sc0000848.1_g000003 Rmu_sc0000848.1_g000014 Rmu_sc0000848.1_g000015 Rmu_sc0000848.1_g000016 Rmu_sc0001264.1_g000001 Rmu_sc0002284.1_g000018 Rmu_sc0002356.1_g000011 Rmu_sc0003020.1_g000003 Rmu_sc0003115.1_g000001 Rmu_sc0003115.1_g000002 Rmu_sc0003115.1_g000003 Rmu_sc0003115.1_g000004 Rmu_sc0003115.1_g000005 Rmu_sc0003115.1_g000008 Rmu_sc0003115.1_g000010 Rmu_sc0003115.1_g000011 Rmu_sc0003115.1_g000014 Rmu_sc0003565.1_g000002 Rmu_sc0003652.1_g000013 Rmu_sc0003652.1_g000015 Rmu_sc0003652.1_g000016 Rmu_sc0003652.1_g000019 Rmu_sc0003940.1_g000001 Rmu_sc0003940.1_g000004 Rmu_sc0003940.1_g000009 Rmu_sc0004084.1_g000010 Rmu_sc0004705.1_g000021 Rmu_sc0004972.1_g000007 Rmu_sc0004987.1_g000002 Rmu_sc0004987.1_g000006 Rmu_sc0005065.1_g000018 Rmu_sc0005065.1_g000029 Rmu_sc0005391.1_g000002 Rmu_sc0005633.1_g000003 Rmu_sc0005633.1_g000008 Rmu_sc0006632.1_g000014 Rmu_sc0006632.1_g000018 Rmu_sc0006681.1_g000010 Rmu_sc0006681.1_g000011 Rmu_sc0006733.1_g000003 Rmu_sc0007385.1_g000005 Rmu_sc0007385.1_g000007 Rmu_sc0007385.1_g000009 Rmu_sc0007385.1_g000016 Rmu_sc0007645.1_g000002 Rmu_sc0007645.1_g000003 Rmu_sc0007645.1_g000022 Rmu_sc0007828.1_g000008 Rmu_sc0008509.1_g000003 Rmu_sc0008509.1_g000015 Rmu_sc0008509.1_g000016 Rmu_sc0008509.1_g000020 Rmu_sc0008509.1_g000030 Rmu_sc0008509.1_g000041 Rmu_sc0008756.1_g000001 Rmu_sc0008756.1_g000003 Rmu_sc0013028.1_g000002 Rmu_sc0013028.1_g000003 Rmu_sc0013028.1_g000005 Rmu_sc0013160.1_g000001 Rmu_sc0014454.1_g000009 Rmu_sc0014455.1_g000007 Rmu_sc0014659.1_g000004 Rmu_sc0017798.1_g000002 Rmu_sc0017798.1_g000004 Rmu_sc0029608.1_g000001 Rmu_sc0037861.1_g000001 Rmu_sc0038750.1_g000001 Rmu_sc0042995.1_g000001 Rmu_ssc0000161.1_g000017
rosa_roxburghii Rroxscaffold_1G00009180 Rroxscaffold_1G00009190 Rroxscaffold_1G00011450 Rroxscaffold_1G00011480 Rroxscaffold_2G00111660 Rroxscaffold_2G00113570 Rroxscaffold_2G00122140 Rroxscaffold_3G00243730 Rroxscaffold_3G00245750 Rroxscaffold_3G00245760 Rroxscaffold_3G00250220 Rroxscaffold_3G00251160 Rroxscaffold_3G00251270 Rroxscaffold_3G00251280 Rroxscaffold_3G00251300 Rroxscaffold_3G00251340 Rroxscaffold_3G00251350 Rroxscaffold_3G00251390 Rroxscaffold_3G00251400 Rroxscaffold_3G00251560 Rroxscaffold_3G00251570 Rroxscaffold_3G00251870 Rroxscaffold_3G00252200 Rroxscaffold_3G00252210 Rroxscaffold_4G00279970 Rroxscaffold_4G00299970 Rroxscaffold_4G00300760 Rroxscaffold_4G00300780 Rroxscaffold_4G00300810 Rroxscaffold_4G00300850 Rroxscaffold_4G00307080 Rroxscaffold_4G00307100 Rroxscaffold_4G00313990 Rroxscaffold_6G00405080
rosa_rugosa Rorug01G0193600 Rorug01G0193700 Rorug01G0243800 Rorug01G0244000 Rorug01G0244000 Rorug01G0244400 Rorug01G0414300.1 Rorug01G0414500 Rorug01G0414600 Rorug02G0235600 Rorug02G0307900 Rorug02G0583100 Rorug02G0583200 Rorug02G0583300 Rorug05G0398000 Rorug05G0398100 Rorug05G0398200 Rorug05G0580300 Rorug05G0590300 Rorug06G0116000 Rorug06G0116100 Rorug07G0096800 Rorug07G0097100.1 Rorug07G0097200 Rorug07G0098600 Rorug07G0098600 Rorug07G0098700 Rorug07G0099100 Rorug07G0106100 Rorug07G0106200 Rorug07G0106200 Rorug07G0106300 Rorug07G0157600 Rorug07G0157700 Rorug07G0157700 Rorug07G0157800
rosa_samantha Rh1AG255500 Rh1AG256700 Rh1BG225800 Rh1BG226200 Rh1BG230000 Rh1CG195300 Rh1CG238400 Rh1CG238500 Rh1CG238900 Rh1CG239000 Rh1CG239300 Rh1CG239400 Rh1CG239800 Rh1CG240000 Rh1CG240200 Rh1CG240300 Rh1CG244300 Rh1CG406900 Rh1CG407300 Rh1CG407400 Rh2CG343600 Rh2DG383200 Rh3BG205900 Rh4AG404400 Rh4BG415500 Rh5AG455200 Rh5AG455600 Rh5CG497000 Rh5CG497200 Rh7AG228800 Rh7AG230400 Rh7AG230800 Rh7AG231200 Rh7AG231600 Rh7AG231800 Rh7AG232100 Rh7AG241600 Rh7BG236200 Rh7CG238200 Rh7CG239100 Rh7CG243400 Rh7CG244900
rosa_wichuraiana Rw0G023040 Rw1G017780 Rw1G022320 Rw1G022340 Rw1G022410 Rw1G022420 Rw1G022440 Rw1G022460 Rw1G022490 Rw1G022500 Rw1G022530 Rw1G022550 Rw1G022560 Rw1G022600 Rw1G023060 Rw1G038150 Rw1G038160 Rw2G008210 Rw2G022350 Rw2G029290 Rw4G015050 Rw4G019850 Rw5G024060 Rw5G042460 Rw7G019160 Rw7G019460 Rw7G019690 Rw7G019830 Rw7G019860 Rw7G019880 Rw7G019890 Rw7G019930 Rw7G019990 Rw7G020460 Rw7G025100 Rw7G025120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 425
AccB1I GGYRCC 2 cut(s) 425, 2357
AciI CCGC 7 cut(s) 423, 1923, 2004, 2135, 2420, 2556, 2640
AclWI GGATC 2 cut(s) 1342, 1365
AcoI YGGCCR 2 cut(s) 527, 1846
AcsI RAATTY 7 cut(s) 308, 505, 1102, 1645, 2130, 2274, 2346
AcuI CTGAAG 4 cut(s) 551, 923, 2229, 2351
AfaI GTAC 5 cut(s) 427, 866, 1050, 1783, 2648
AfiI CCNNNNNNNGG 5 cut(s) 92, 239, 386, 970, 2368
AflII CTTAAG 1 cut(s) 2570
AjnI CCWGG 2 cut(s) 2499, 2604
Alw21I GWGCWC 1 cut(s) 1202
Alw26I GTCTC 5 cut(s) 728, 1316, 1572, 2495, 2662
AlwI GGATC 2 cut(s) 1342, 1365
Ama87I CYCGRG 1 cut(s) 1052
AoxI GGCC 3 cut(s) 527, 1128, 1846
ApeKI GCWGC 4 cut(s) 702, 849, 1262, 1931
ApoI RAATTY 7 cut(s) 308, 505, 1102, 1645, 2130, 2274, 2346
ArsI GACNNNNNNTTYG 2 cut(s) 869, 901
AseI ATTAAT 1 cut(s) 618
Asp700I GAANNNNTTC 1 cut(s) 394
Asp718I GGTACC 1 cut(s) 425
AspLEI GCGC 2 cut(s) 1262, 1478
AspS9I GGNCC 7 cut(s) 221, 368, 746, 1129, 1538, 1948, 2414
AsuC2I CCSGG 1 cut(s) 1099
AsuHPI GGTGA 2 cut(s) 2042, 2430
AvaI CYCGRG 1 cut(s) 1052
AvaII GGWCC 6 cut(s) 221, 368, 746, 1538, 1948, 2414
BaeI ACNNNNGTAYC 4 cut(s) 417, 450, 2010, 2043
BalI TGGCCA 2 cut(s) 529, 1848
BanI GGYRCC 2 cut(s) 425, 2357
BanII GRGCYC 1 cut(s) 1202
BarI GAAGNNNNNNTAC 2 cut(s) 807, 839
BbsI GAAGAC 5 cut(s) 754, 1436, 1449, 1539, 2217
Bbv12I GWGCWC 1 cut(s) 1202
BbvI GCAGC 4 cut(s) 714, 861, 1274, 1918
BccI CCATC 5 cut(s) 1492, 2359, 2438, 2480, 2542
BciT130I CCWGG 2 cut(s) 2501, 2606
BciVI GTATCC 1 cut(s) 816
BclI TGATCA 2 cut(s) 3, 150
BcnI CCSGG 1 cut(s) 1099
BcoDI GTCTC 5 cut(s) 728, 1316, 1572, 2495, 2662
BfaI CTAG 6 cut(s) 782, 791, 1074, 1382, 1928, 2181
BfmI CTRYAG 1 cut(s) 1712
BfrI CTTAAG 1 cut(s) 2570
BfuI GTATCC 1 cut(s) 816
BglII AGATCT 2 cut(s) 793, 1384
BisI GCNGC 5 cut(s) 703, 850, 1263, 1932, 2557
BlsI GCNGC 5 cut(s) 704, 851, 1264, 1933, 2558
Bme1390I CCNGG 3 cut(s) 1099, 2501, 2606
Bme18I GGWCC 6 cut(s) 221, 368, 746, 1538, 1948, 2414
BmeT110I CYCGRG 1 cut(s) 1052
BmgT120I GGNCC 7 cut(s) 221, 368, 746, 1129, 1538, 1948, 2414
BmiI GGNNCC 2 cut(s) 427, 2359
BmrFI CCNGG 3 cut(s) 1099, 2501, 2606
BmsI GCATC 1 cut(s) 1623
BoxI GACNNNNGTC 1 cut(s) 1543
BpiI GAAGAC 5 cut(s) 754, 1436, 1449, 1539, 2217
BplI GAGNNNNNCTC 2 cut(s) 1229, 1261
BpmI CTGGAG 2 cut(s) 1554, 2043
Bpu10I CCTNAGC 2 cut(s) 1196, 1502
BpuEI CTTGAG 4 cut(s) 473, 499, 973, 2439
BpuMI CCSGG 1 cut(s) 1099
BsaBI GATNNNNATC 2 cut(s) 1209, 1512
BsaI GGTCTC 2 cut(s) 728, 2495
BsaJI CCNNGG 4 cut(s) 945, 1405, 1804, 2500
BsaWI WCCGGW 1 cut(s) 2259
BsaXI ACNNNNNCTCC 2 cut(s) 1552, 1582
Bsc4I CCNNNNNNNGG 5 cut(s) 92, 239, 386, 970, 2368
Bse1I ACTGG 3 cut(s) 880, 2026, 2542
Bse3DI GCAATG 2 cut(s) 1478, 1984
Bse8I GATNNNNATC 2 cut(s) 1209, 1512
BseBI CCWGG 2 cut(s) 2501, 2606
BseDI CCNNGG 4 cut(s) 945, 1405, 1804, 2500
BseGI GGATG 2 cut(s) 1638, 2553
BseJI GATNNNNATC 2 cut(s) 1209, 1512
BseLI CCNNNNNNNGG 5 cut(s) 92, 239, 386, 970, 2368
BseMI GCAATG 2 cut(s) 1478, 1984
BseMII CTCAG 4 cut(s) 314, 504, 918, 1187
BseNI ACTGG 3 cut(s) 880, 2026, 2542
BseXI GCAGC 4 cut(s) 714, 861, 1274, 1918
BseYI CCCAGC 2 cut(s) 381, 2524
BshFI GGCC 3 cut(s) 529, 1130, 1848
BshNI GGYRCC 2 cut(s) 425, 2357
BsiHKAI GWGCWC 1 cut(s) 1202
BsiHKCI CYCGRG 1 cut(s) 1052
BsiSI CCGG 2 cut(s) 1098, 2260
BslI CCNNNNNNNGG 5 cut(s) 92, 239, 386, 970, 2368
BsmAI GTCTC 5 cut(s) 728, 1316, 1572, 2495, 2662
BsnI GGCC 3 cut(s) 529, 1130, 1848
Bso31I GGTCTC 2 cut(s) 728, 2495
BsoBI CYCGRG 1 cut(s) 1052
Bsp1286I GDGCHC 1 cut(s) 1202
Bsp1407I TGTACA 1 cut(s) 2646
Bsp19I CCATGG 1 cut(s) 1405
BspACI CCGC 7 cut(s) 423, 1923, 2004, 2135, 2420, 2556, 2640
BspANI GGCC 3 cut(s) 529, 1130, 1848
BspCNI CTCAG 4 cut(s) 315, 505, 919, 1188
BspLI GGNNCC 2 cut(s) 427, 2359
BspPI GGATC 2 cut(s) 1342, 1365
BspT107I GGYRCC 2 cut(s) 425, 2357
BspTI CTTAAG 1 cut(s) 2570
BspTNI GGTCTC 2 cut(s) 728, 2495
BsrDI GCAATG 2 cut(s) 1478, 1984
BsrGI TGTACA 1 cut(s) 2646
BsrI ACTGG 3 cut(s) 880, 2026, 2542
BssECI CCNNGG 4 cut(s) 945, 1405, 1804, 2500
BssT1I CCWWGG 3 cut(s) 945, 1405, 1804
Bst2UI CCWGG 2 cut(s) 2501, 2606
Bst4CI ACNGT 2 cut(s) 1781, 1884
Bst6I CTCTTC 2 cut(s) 639, 733
BstAFI CTTAAG 1 cut(s) 2570
BstAUI TGTACA 1 cut(s) 2646
BstC8I GCNNGC 3 cut(s) 773, 1979, 2293
BstDEI CTNAG 9 cut(s) 323, 513, 853, 927, 1196, 1372, 1502, 1596, 2306
BstDSI CCRYGG 1 cut(s) 1405
BstF5I GGATG 2 cut(s) 1638, 2553
BstHHI GCGC 2 cut(s) 1262, 1478
BstMAI GTCTC 5 cut(s) 728, 1316, 1572, 2495, 2662
BstMWI GCNNNNNNNGC 3 cut(s) 1257, 1704, 2456
BstNI CCWGG 2 cut(s) 2501, 2606
BstNSI RCATGY 1 cut(s) 775
BstPAI GACNNNNGTC 1 cut(s) 1543
BstSCI CCNGG 3 cut(s) 1097, 2499, 2604
BstSFI CTRYAG 1 cut(s) 1712
BstV1I GCAGC 4 cut(s) 714, 861, 1274, 1918
BstV2I GAAGAC 5 cut(s) 754, 1436, 1449, 1539, 2217
BstX2I RGATCY 3 cut(s) 793, 1357, 1384
BstXI CCANNNNNNTGG 1 cut(s) 1406
BstYI RGATCY 3 cut(s) 793, 1357, 1384
BsuI GTATCC 1 cut(s) 816
BsuRI GGCC 3 cut(s) 529, 1130, 1848
BtgI CCRYGG 1 cut(s) 1405
BtsCI GGATG 2 cut(s) 1638, 2553
BtsIMutI CAGTG 3 cut(s) 223, 2521, 2535
Cac8I GCNNGC 3 cut(s) 773, 1979, 2293
CfoI GCGC 2 cut(s) 1262, 1478
Cfr13I GGNCC 7 cut(s) 221, 368, 746, 1129, 1538, 1948, 2414
Csp6I GTAC 5 cut(s) 426, 865, 1049, 1782, 2647
CviAII CATG 9 cut(s) 498, 772, 1406, 1554, 1739, 1839, 1940, 2402, 2477
CviQI GTAC 5 cut(s) 426, 865, 1049, 1782, 2647
DdeI CTNAG 9 cut(s) 323, 513, 853, 927, 1196, 1372, 1502, 1596, 2306
EaeI YGGCCR 2 cut(s) 527, 1846
Eam1104I CTCTTC 2 cut(s) 639, 733
EarI CTCTTC 2 cut(s) 639, 733
EciI GGCGGA 1 cut(s) 2124
Ecl136II GAGCTC 1 cut(s) 1200
Eco130I CCWWGG 3 cut(s) 945, 1405, 1804
Eco24I GRGCYC 1 cut(s) 1202
Eco31I GGTCTC 2 cut(s) 728, 2495
Eco32I GATATC 1 cut(s) 2265
Eco47I GGWCC 6 cut(s) 221, 368, 746, 1538, 1948, 2414
Eco53kI GAGCTC 1 cut(s) 1200
Eco57I CTGAAG 4 cut(s) 551, 923, 2229, 2351
Eco88I CYCGRG 1 cut(s) 1052
EcoICRI GAGCTC 1 cut(s) 1200
EcoO109I RGGNCCY 3 cut(s) 368, 746, 1538
EcoRI GAATTC 2 cut(s) 1102, 2346
EcoRII CCWGG 2 cut(s) 2499, 2604
EcoRV GATATC 1 cut(s) 2265
EcoT14I CCWWGG 3 cut(s) 945, 1405, 1804
EcoT38I GRGCYC 1 cut(s) 1202
ErhI CCWWGG 3 cut(s) 945, 1405, 1804
FaeI CATG 9 cut(s) 501, 775, 1409, 1557, 1742, 1842, 1943, 2405, 2480
FatI CATG 9 cut(s) 497, 771, 1405, 1553, 1738, 1838, 1939, 2401, 2476
FauNDI CATATG 1 cut(s) 352
FbaI TGATCA 2 cut(s) 3, 150
Fnu4HI GCNGC 5 cut(s) 703, 850, 1263, 1932, 2557
FokI GGATG 2 cut(s) 1645, 2560
FriOI GRGCYC 1 cut(s) 1202
Fsp4HI GCNGC 5 cut(s) 703, 850, 1263, 1932, 2557
FspBI CTAG 6 cut(s) 782, 791, 1074, 1382, 1928, 2181
GlaI GCGC 2 cut(s) 1261, 1477
GluI GCNGC 5 cut(s) 703, 850, 1263, 1932, 2557
GsaI CCCAGC 2 cut(s) 385, 2528
GsuI CTGGAG 2 cut(s) 1554, 2043
HaeIII GGCC 3 cut(s) 529, 1130, 1848
HapII CCGG 2 cut(s) 1098, 2260
HhaI GCGC 2 cut(s) 1262, 1478
Hin1II CATG 9 cut(s) 501, 775, 1409, 1557, 1742, 1842, 1943, 2405, 2480
Hin6I GCGC 2 cut(s) 1260, 1476
HinP1I GCGC 2 cut(s) 1260, 1476
HincII GTYRAC 3 cut(s) 1588, 1801, 1869
HindII GTYRAC 3 cut(s) 1588, 1801, 1869
HindIII AAGCTT 2 cut(s) 1435, 2201
HpaII CCGG 2 cut(s) 1098, 2260
HphI GGTGA 2 cut(s) 2042, 2430
Hpy166II GTNNAC 8 cut(s) 221, 1154, 1588, 1801, 1869, 2414, 2564, 2647
Hpy188I TCNGA 9 cut(s) 324, 365, 445, 514, 889, 942, 1204, 2172, 2600
Hpy8I GTNNAC 8 cut(s) 221, 1154, 1588, 1801, 1869, 2414, 2564, 2647
HpyAV CCTTC 5 cut(s) 181, 284, 809, 1776, 1921
HpyCH4III ACNGT 2 cut(s) 1781, 1884
HpyCH4IV ACGT 1 cut(s) 994
HpyF10VI GCNNNNNNNGC 3 cut(s) 1257, 1704, 2456
HpyF3I CTNAG 9 cut(s) 323, 513, 853, 927, 1196, 1372, 1502, 1596, 2306
HpySE526I ACGT 1 cut(s) 994
Hsp92II CATG 9 cut(s) 501, 775, 1409, 1557, 1742, 1842, 1943, 2405, 2480
HspAI GCGC 2 cut(s) 1260, 1476
KpnI GGTACC 1 cut(s) 429
Ksp22I TGATCA 2 cut(s) 3, 150
LmnI GCTCC 2 cut(s) 1615, 2447
Lsp1109I GCAGC 4 cut(s) 714, 861, 1274, 1918
LweI GCATC 1 cut(s) 1623
MaeI CTAG 6 cut(s) 782, 791, 1074, 1382, 1928, 2181
MaeII ACGT 1 cut(s) 994
MaeIII GTNAC 3 cut(s) 990, 2219, 2533
MfeI CAATTG 3 cut(s) 35, 182, 329
MflI RGATCY 3 cut(s) 793, 1357, 1384
MhlI GDGCHC 1 cut(s) 1202
MlsI TGGCCA 2 cut(s) 529, 1848
MluNI TGGCCA 2 cut(s) 529, 1848
MlyI GAGTC 6 cut(s) 40, 187, 334, 866, 896, 1864
MmeI TCCRAC 3 cut(s) 756, 1610, 2214
Mox20I TGGCCA 2 cut(s) 529, 1848
MroXI GAANNNNTTC 1 cut(s) 394
MscI TGGCCA 2 cut(s) 529, 1848
MslI CAYNNNNRTG 3 cut(s) 770, 1737, 2481
Msp20I TGGCCA 2 cut(s) 529, 1848
MspA1I CMGCKG 2 cut(s) 2422, 2642
MspCI CTTAAG 1 cut(s) 2570
MspI CCGG 2 cut(s) 1098, 2260
MspR9I CCNGG 3 cut(s) 1099, 2501, 2606
MunI CAATTG 3 cut(s) 35, 182, 329
MvaI CCWGG 2 cut(s) 2501, 2606
MwoI GCNNNNNNNGC 3 cut(s) 1257, 1704, 2456
NciI CCSGG 1 cut(s) 1099
NcoI CCATGG 1 cut(s) 1405
NdeI CATATG 1 cut(s) 352
NlaIII CATG 9 cut(s) 501, 775, 1409, 1557, 1742, 1842, 1943, 2405, 2480
NlaIV GGNNCC 2 cut(s) 427, 2359
NmuCI GTSAC 2 cut(s) 990, 2533
NspI RCATGY 1 cut(s) 775
PaeI GCATGC 1 cut(s) 775
PdmI GAANNNNTTC 1 cut(s) 394
PfeI GAWTC 8 cut(s) 301, 1210, 1279, 1420, 1902, 2237, 2529, 2601
PfoI TCCNGGA 2 cut(s) 1097, 2604
PkrI GCNGC 5 cut(s) 704, 851, 1264, 1933, 2558
PleI GAGTC 6 cut(s) 39, 186, 333, 865, 896, 1864
PpsI GAGTC 6 cut(s) 39, 186, 333, 865, 896, 1864
PpuMI RGGWCCY 3 cut(s) 368, 746, 1538
PshAI GACNNNNGTC 1 cut(s) 1543
PshBI ATTAAT 1 cut(s) 618
Psp124BI GAGCTC 1 cut(s) 1202
Psp5II RGGWCCY 3 cut(s) 368, 746, 1538
Psp6I CCWGG 2 cut(s) 2499, 2604
PspFI CCCAGC 2 cut(s) 381, 2524
PspGI CCWGG 2 cut(s) 2499, 2604
PspN4I GGNNCC 2 cut(s) 427, 2359
PspPI GGNCC 7 cut(s) 221, 368, 746, 1129, 1538, 1948, 2414
PspPPI RGGWCCY 3 cut(s) 368, 746, 1538
PsuI RGATCY 3 cut(s) 793, 1357, 1384
RsaI GTAC 5 cut(s) 427, 866, 1050, 1783, 2648
RsaNI GTAC 5 cut(s) 426, 865, 1049, 1782, 2647
RseI CAYNNNNRTG 3 cut(s) 770, 1737, 2481
SacI GAGCTC 1 cut(s) 1202
SatI GCNGC 5 cut(s) 703, 850, 1263, 1932, 2557
Sau96I GGNCC 7 cut(s) 221, 368, 746, 1129, 1538, 1948, 2414
SchI GAGTC 6 cut(s) 40, 187, 334, 866, 896, 1864
ScrFI CCNGG 3 cut(s) 1099, 2501, 2606
SduI GDGCHC 1 cut(s) 1202
SfaNI GCATC 1 cut(s) 1623
SfcI CTRYAG 1 cut(s) 1712
SinI GGWCC 6 cut(s) 221, 368, 746, 1538, 1948, 2414
SmiMI CAYNNNNRTG 3 cut(s) 770, 1737, 2481
SmlI CTYRAG 5 cut(s) 452, 478, 952, 2454, 2570
SmoI CTYRAG 5 cut(s) 452, 478, 952, 2454, 2570
SphI GCATGC 1 cut(s) 775
SsiI CCGC 7 cut(s) 423, 1923, 2004, 2135, 2420, 2556, 2640
SspI AATATT 3 cut(s) 678, 1160, 1966
SspMI CTAG 6 cut(s) 782, 791, 1074, 1382, 1928, 2181
SstI GAGCTC 1 cut(s) 1202
StyD4I CCNGG 3 cut(s) 1097, 2499, 2604
StyI CCWWGG 3 cut(s) 945, 1405, 1804
TaaI ACNGT 2 cut(s) 1781, 1884
TaiI ACGT 1 cut(s) 997
TaqI TCGA 2 cut(s) 1430, 1520
TatI WGTACW 2 cut(s) 864, 2646
TauI GCSGC 1 cut(s) 2559
TfiI GAWTC 8 cut(s) 301, 1210, 1279, 1420, 1902, 2237, 2529, 2601
TscAI CASTG 3 cut(s) 223, 2521, 2542
TseFI GTSAC 2 cut(s) 990, 2533
TseI GCWGC 4 cut(s) 702, 849, 1262, 1931
Tsp45I GTSAC 2 cut(s) 990, 2533
TspDTI ATGAA 6 cut(s) 7, 154, 301, 1217, 1409, 1928
TspRI CASTG 3 cut(s) 223, 2521, 2542
Vha464I CTTAAG 1 cut(s) 2570
VpaK11BI GGWCC 6 cut(s) 221, 368, 746, 1538, 1948, 2414
VspI ATTAAT 1 cut(s) 618
XapI RAATTY 7 cut(s) 308, 505, 1102, 1645, 2130, 2274, 2346
XbaI TCTAGA 1 cut(s) 2180
XceI RCATGY 1 cut(s) 775
XcmI CCANNNNNNNNNTGG 1 cut(s) 1942
XmnI GAANNNNTTC 1 cut(s) 394
XspI CTAG 6 cut(s) 782, 791, 1074, 1382, 1928, 2181
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.