Rroxscaffold_6G00405080

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000006
Physical Location & Seq
Reverse (-)
27543493 .. 27546389
2897 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_6G00405080.1

Sequence Viewer

Length: 2832 bp
ATGGAAGGAAGCTTAAGGTTGCTCCGACTTGTTTATGCAATATTAGGTGTGCTGCTTTGGCTACAAATCAATCCTTGCTCATCTCTTGGATTCAACTCATTAATTGAGTGCATACAAAGTGAAAGGGAAGCACTCCTTGCTTTCAAACAAGGCCTCGTGGAATATGACAATGCCGGACCCGGACTACTCTCATCATGGGGAGGATCAAGAGAAGATTGTTGCAGATGGAAAGGAGTTTACTGTGACAACCAAACTGGCCATGTTCTTCGACTTGGTTTTGGAGGTGGAGGTCAGCAATACTATTTCCGAGGTACGATCAGTTCTAAACTCACTGGGTTACGACATTTGGAATATTTGAGTCTCAGTAATATTCACTTCAGTGGGAGCCAAATTCCCGAGTTTATTGGTTCTTTGACCAATTTACGACATCTCGATCTCTCGAATGCTAATTTTAGCGGTCAAATACCATATCTTGGAAACCTTACCAAGCTGCAATATCTCGATCTCAGCTCAAATGTTGACCTTACTAATCCAGAAAACCTTTCTTGGCTCCCTCATCTTTCATCTTTAAAACACCTGGACCTGAGTGGTATCAACCTCAGCAATGTTTTTGATTGGTTTGAAACAATAAACAAGCTCCCAAAACTAGGACACTTCGCATTAAAGGACTGTAGTCTTCCTCCTCTAGTTTTTCCAACCAGTAGTCTTTCTTACATAAATTCTTCAAACTCTCTTGCTACTGTTGATCTTGAGGACAACAATGCCATCATTTCTTCTTCAATATTCAAATGGTTATGCAACTACAGTACCACTCTTGTTTATCTAGACCTCTCTTATAATCAATTTGGTCAGCTCCCAATTCACGATTGTCTAGGAAACATGACTTCTCTTGCATATCTTGCTATCAATGATGTTAATTATCTTGAAGGAGAAATCCCCCCATCCTTTGCCAAGTTGTGTAATTTGAAAACGTTGGATCTTGGGAACAATAATCTGAGTGGACATTTTTGGGAGATTGTTGAAATATTGTCTGCATGTGGTCAATATTCACTAGAGAGTTTAGATTTCTCTTATAATCAAATTGTAGGGTCACTGCCTGATCTTACCAACTTTTCATTGTTGAGAGAATTAAATCTCTTTGGTAATCGATTAATCGGAAAAATACCAGAAAGTATTGGGCAAGTGTCAAACCTTGAGCTTTTCTCTGTTGGTCTTAATGCTCTAGAAGGGGTGATTTCAGAAACTCATTTCTCACAGCTCTCCAAATTGCGGCTTCTGGATCTATCCTCTAACTCACTAGTTTTGAACTTCCATTCTGAGTGGGTTCCTCCTTTTCAGTTGGATCTCATATCACTGAGGTCATGCAACATGGGGCCGCATTTTCCAAAATGGCTTCGAACTCAGAGGAATTATTCCCAGCTTGCTCTTTCTAGTGCTGGAATTTCTGATTTCATTCCAAGTTGGTTTTGGGGTCTATCTAATAATTTTTTCAATTTGGATCTCTCCTGCAATCAAATTCGAGGAACATTAGGGAACATGACTTTGGAGTCTATAAATGCCCCTTTTCTGAATTTCAGCTCCAACCAATTGGAAGGTGCGGTACCCTCAAATCTAGCAAAGGCCAAGTCTCTTGATCTTTCCAACAACAAAATTTCAGGGTTGAATTCTTTCTTGTGCAGCAACATCACAGGCAGCAATTTGGTCTTTCTGGATCTCTCAAGCAACCATGTATCGGAACAACTTTTGGATTGCTGGAGAAATTTGGATAATCTACTCATGCTTGATTTGAGTTACAATTCTATTACTGGGATAATTCCTTCAACAATCAGCAGCCTATCTCAAATTGTATCTTTGAACCTTAGAAGCAACAAATTTTCAGGTCAGTTGCCTTTGTCCTTGAAGAATTGCATACACCTAAGTGTAATTGATCTTGGAGAAAATGAATTATCAGGAACAATACCTGAATGGTTAGGGATTAACCTTTCCAATTTGGTTATCCTTTCGCTTCAGTCAAATCACTTAAGTGGGAGCTTACCATCTCAATTATGCCATCTATCAAACATTCAGATGTTAGATTTCTCTATGAACCAAATCTCTGGAACCATACCCAAGTGCCTCAACAACTTGACTCGTTTGGCTCAAAAAGGAAATACAACTCCATCCATCAGACATTCATATGACATTACGTCTAGAGGTTCTAGTCTAACCATAGAATTCTCGGATTCTTATGAGGATGAGGCAATCTTCATGTGGAAAGGAAAGATGTCCACATACAAAAGTATTTTAGGACTTATGAAGAGAATTGATTTCTCAAGCAATAGGCTAACAGGGGAGATTCCAAGTGAAATTACTCATCTTGTTGGGTTGTCATTAGATTCTCTTGATTTGTCAAGAAACCAGATAGATGGCAGAATCCCAATAAGCCTCGCTAGGATTGATGGTATCAGTTCCTTGGACTTGTCAAATAACAACCTGTCTGGCAAAATTCCAAACGCCATTCATCTCCAAACCTTTGAAGAGGCTTATGATGGAAATCCTCAACTTTGTGGACCTCCACTTCAAAAGAGGTGTCCTGAAGAAGAAGCAAGCCCAGAGAAAAGACCCTTGCAGAATCAGGAAGTCAAAGATGATGAGTTTATTAACCATGGATTTTACATCAGCATGGCGGTTGGGTTTGTTGTTGGATTCTGGGGAGTTTGTGGAAGTTTGATATTCAACAGGTCATGGAGATACGTATACATCAACTTCTTGAATTTTCTACATGATTGGCTCTATGTGAGGGTAACCTTGATCATGCTGCAATTAAGGGAGATGCTTAATAGACGAGCATAA

Protein Analysis

943

Amino Acids

105.08

Weight (kDa)

5.53

Isoelectric Point (pI)

38.36

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 39 - 82 4.4e-12 Leucine rich repeat N-terminal domain
LRR_14 PF23598 109 - 217 9.9e-09 Leucine-rich repeat region
LRR_14 PF23598 275 - 467 6.5e-08 Leucine-rich repeat region
LRR_8 PF13855 566 - 625 4.7e-07 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000028)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g45420 FvH4_4g14031 FvH4_5g20780 FvH4_6g28530 FvH4_7g14020 FvH4_7g14030 FvH4_7g14040 FvH4_7g14050 FvH4_7g14060 FvH4_7g14070 FvH4_7g14090 FvH4_7g14110 FvH4_7g14140 FvH4_7g14450
malus_domestica MD00G1189100.v1.1 MD01G1018600.v1.1 MD01G1053800.v1.1 MD01G1053900.v1.1 MD01G1054000.v1.1 MD01G1054100.v1.1 MD01G1056700.v1.1 MD01G1057000.v1.1 MD01G1057300.v1.1 MD01G1057400.v1.1 MD01G1061600.v1.1 MD01G1061800.v1.1 MD01G1061900.v1.1 MD01G1062000.v1.1 MD01G1062400.v1.1 MD01G1062500.v1.1 MD01G1063200.v1.1 MD01G1063300.v1.1 MD01G1063400.v1.1 MD01G1063700.v1.1 MD01G1063900.v1.1 MD01G1064200.v1.1 MD01G1064300.v1.1 MD01G1064400.v1.1 MD01G1064600.v1.1 MD01G1064700.v1.1 MD01G1181100.v1.1 MD01G1212300.v1.1 MD01G1212500.v1.1 MD01G1212600.v1.1 MD02G1271900.v1.1 MD07G1136500.v1.1 MD07G1139300.v1.1 MD07G1141200.v1.1 MD07G1144700.v1.1 MD08G1144200.v1.1 MD14G1186300.v1.1 MD14G1186500.v1.1 MD14G1186700.v1.1 MD14G1186800.v1.1 MD15G1351300.v1.1 MD15G1439500.v1.1
prunus_persica Prupe.1G067000_v2.0.a1 Prupe.2G077400_v2.0.a1 Prupe.2G077700_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078600_v2.0.a1 Prupe.2G078800_v2.0.a1 Prupe.2G099600_v2.0.a1 Prupe.2G099700_v2.0.a1 Prupe.2G155100_v2.0.a1 Prupe.2G155500_v2.0.a1 Prupe.2G155600_v2.0.a1 Prupe.2G155800_v2.0.a1 Prupe.2G155900_v2.0.a1 Prupe.2G156100_v2.0.a1 Prupe.2G166100_v2.0.a1 Prupe.2G166300_v2.0.a1 Prupe.2G167500_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G168400_v2.0.a1 Prupe.2G168700_v2.0.a1 Prupe.2G168800_v2.0.a1 Prupe.2G169000_v2.0.a1 Prupe.2G169100_v2.0.a1 Prupe.2G169200_v2.0.a1 Prupe.2G169500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G172300_v2.0.a1 Prupe.2G304800_v2.0.a1 Prupe.4G264800_v2.0.a1 Prupe.4G265000_v2.0.a1 Prupe.5G051900_v2.0.a1 Prupe.5G052000_v2.0.a1
pyrus_communis pycom01g08380 pycom01g08430 pycom01g08490 pycom01g08520 pycom01g08540 pycom01g08550 pycom01g08600 pycom01g08630 pycom01g08660 pycom01g08720 pycom01g09180 pycom01g09200 pycom01g09210 pycom01g09270 pycom01g09280 pycom01g09300 pycom01g09380 pycom01g19110 pycom01g22260 pycom01g22310 pycom01g22330 pycom01g22350 pycom01g22360 pycom02g23250 pycom07g13420 pycom07g13670 pycom07g13900 pycom07g13910 pycom07g13960 pycom07g13970 pycom07g25680 pycom11g22830
rosa_chinensis RchiOBHm_Chr0c22g0500431 RchiOBHm_Chr0c22g0500441 RchiOBHm_Chr0c22g0500561 RchiOBHm_Chr0c22g0500571 RchiOBHm_Chr0c22g0500611 RchiOBHm_Chr0c22g0500621 RchiOBHm_Chr0c22g0500631 RchiOBHm_Chr0c22g0500681 RchiOBHm_Chr1g0348221 RchiOBHm_Chr1g0348251 RchiOBHm_Chr1g0352861 RchiOBHm_Chr1g0352871 RchiOBHm_Chr1g0352891 RchiOBHm_Chr1g0352901 RchiOBHm_Chr1g0354671 RchiOBHm_Chr1g0354701 RchiOBHm_Chr1g0354711 RchiOBHm_Chr1g0354751 RchiOBHm_Chr1g0354761 RchiOBHm_Chr1g0354841 RchiOBHm_Chr1g0354851 RchiOBHm_Chr1g0354881 RchiOBHm_Chr1g0354971 RchiOBHm_Chr1g0354981 RchiOBHm_Chr1g0354991 RchiOBHm_Chr1g0355001 RchiOBHm_Chr1g0355011 RchiOBHm_Chr1g0355021 RchiOBHm_Chr1g0355861 RchiOBHm_Chr1g0379671 RchiOBHm_Chr1g0379681 RchiOBHm_Chr2g0096591 RchiOBHm_Chr2g0132821 RchiOBHm_Chr3g0454901 RchiOBHm_Chr3g0472711 RchiOBHm_Chr4g0400791 RchiOBHm_Chr5g0069481 RchiOBHm_Chr5g0069511 RchiOBHm_Chr5g0069551 RchiOBHm_Chr6g0254651 RchiOBHm_Chr6g0259721 RchiOBHm_Chr7g0205911 RchiOBHm_Chr7g0206401 RchiOBHm_Chr7g0206571 RchiOBHm_Chr7g0206581 RchiOBHm_Chr7g0206621 RchiOBHm_Chr7g0206631 RchiOBHm_Chr7g0206641 RchiOBHm_Chr7g0206681 RchiOBHm_Chr7g0206691 RchiOBHm_Chr7g0206751 RchiOBHm_Chr7g0206761 RchiOBHm_Chr7g0206851 RchiOBHm_Chr7g0206911 RchiOBHm_Chr7g0206921 RchiOBHm_Chr7g0207001 RchiOBHm_Chr7g0207011 RchiOBHm_Chr7g0207031 RchiOBHm_Chr7g0207101 RchiOBHm_Chr7g0207161 RchiOBHm_Chr7g0207201 RchiOBHm_Chr7g0207271 RchiOBHm_Chr7g0207301 RchiOBHm_Chr7g0207311 RchiOBHm_Chr7g0207421 RchiOBHm_Chr7g0207481 RchiOBHm_Chr7g0207491 RchiOBHm_Chr7g0207501 RchiOBHm_Chr7g0207521 RchiOBHm_Chr7g0207531 RchiOBHm_Chr7g0207561 RchiOBHm_Chr7g0207571 RchiOBHm_Chr7g0207581 RchiOBHm_Chr7g0207601 RchiOBHm_Chr7g0207621 RchiOBHm_Chr7g0207631 RchiOBHm_Chr7g0207651 RchiOBHm_Chr7g0207661 RchiOBHm_Chr7g0207711 RchiOBHm_Chr7g0207761 RchiOBHm_Chr7g0207801 RchiOBHm_Chr7g0208821 RchiOBHm_Chr7g0208831 RchiOBHm_Chr7g0208841 RchiOBHm_Chr7g0213601 RchiOBHm_Chr7g0215981 RchiOBHm_Chr7g0216021
rosa_laevigata RLG00000003193 RLG00000003194 RLG00000003287 RLG00000003288 RLG00000003289 RLG00000003293 RLG00000003294 RLG00000003295 RLG00000003297 RLG00000003299 RLG00000003301 RLG00000003327 RLG00000003347 RLG00000016653 RLG00000018642 RLG00000018643 RLG00000019285 RLG00000022542 RLG00000026368 RLG00000026371 RLG00000028124 RLG00000028125 RLG00000028183 RLG00000028184 RLG00000028185 RLG00000028188 RLG00000028673 RLG00000029267 RLG00000029325 RLG00000029674 RLG00000032883 RLG00000036055 RLG00000036058 RLG00000036065 RLG00000036068 RLG00000036071 RLG00000036072 RLG00000036075 RLG00000036076
rosa_multiflora Rmu_co8250183.1_g000001 Rmu_co8271981.1_g000001 Rmu_co8410829.1_g000001 Rmu_co8432879.1_g000001 Rmu_co8441941.1_g000001 Rmu_sc0000076.1_g000031 Rmu_sc0000738.1_g000038 Rmu_sc0000848.1_g000003 Rmu_sc0000848.1_g000014 Rmu_sc0000848.1_g000015 Rmu_sc0000848.1_g000016 Rmu_sc0001264.1_g000001 Rmu_sc0002284.1_g000018 Rmu_sc0002356.1_g000011 Rmu_sc0003020.1_g000003 Rmu_sc0003115.1_g000001 Rmu_sc0003115.1_g000002 Rmu_sc0003115.1_g000003 Rmu_sc0003115.1_g000004 Rmu_sc0003115.1_g000005 Rmu_sc0003115.1_g000008 Rmu_sc0003115.1_g000010 Rmu_sc0003115.1_g000011 Rmu_sc0003115.1_g000014 Rmu_sc0003565.1_g000002 Rmu_sc0003652.1_g000013 Rmu_sc0003652.1_g000015 Rmu_sc0003652.1_g000016 Rmu_sc0003652.1_g000019 Rmu_sc0003940.1_g000001 Rmu_sc0003940.1_g000004 Rmu_sc0003940.1_g000009 Rmu_sc0004084.1_g000010 Rmu_sc0004705.1_g000021 Rmu_sc0004972.1_g000007 Rmu_sc0004987.1_g000002 Rmu_sc0004987.1_g000006 Rmu_sc0005065.1_g000018 Rmu_sc0005065.1_g000029 Rmu_sc0005391.1_g000002 Rmu_sc0005633.1_g000003 Rmu_sc0005633.1_g000008 Rmu_sc0006632.1_g000014 Rmu_sc0006632.1_g000018 Rmu_sc0006681.1_g000010 Rmu_sc0006681.1_g000011 Rmu_sc0006733.1_g000003 Rmu_sc0007385.1_g000005 Rmu_sc0007385.1_g000007 Rmu_sc0007385.1_g000009 Rmu_sc0007385.1_g000016 Rmu_sc0007645.1_g000002 Rmu_sc0007645.1_g000003 Rmu_sc0007645.1_g000022 Rmu_sc0007828.1_g000008 Rmu_sc0008509.1_g000003 Rmu_sc0008509.1_g000015 Rmu_sc0008509.1_g000016 Rmu_sc0008509.1_g000020 Rmu_sc0008509.1_g000030 Rmu_sc0008509.1_g000041 Rmu_sc0008756.1_g000001 Rmu_sc0008756.1_g000003 Rmu_sc0013028.1_g000002 Rmu_sc0013028.1_g000003 Rmu_sc0013028.1_g000005 Rmu_sc0013160.1_g000001 Rmu_sc0014454.1_g000009 Rmu_sc0014455.1_g000007 Rmu_sc0014659.1_g000004 Rmu_sc0017798.1_g000002 Rmu_sc0017798.1_g000004 Rmu_sc0029608.1_g000001 Rmu_sc0037861.1_g000001 Rmu_sc0038750.1_g000001 Rmu_sc0042995.1_g000001 Rmu_ssc0000161.1_g000017
rosa_roxburghii Rroxscaffold_1G00009180 Rroxscaffold_1G00009190 Rroxscaffold_1G00011450 Rroxscaffold_1G00011480 Rroxscaffold_2G00111660 Rroxscaffold_2G00113570 Rroxscaffold_2G00122140 Rroxscaffold_3G00243730 Rroxscaffold_3G00245750 Rroxscaffold_3G00245760 Rroxscaffold_3G00250220 Rroxscaffold_3G00251160 Rroxscaffold_3G00251270 Rroxscaffold_3G00251280 Rroxscaffold_3G00251300 Rroxscaffold_3G00251340 Rroxscaffold_3G00251350 Rroxscaffold_3G00251390 Rroxscaffold_3G00251400 Rroxscaffold_3G00251560 Rroxscaffold_3G00251570 Rroxscaffold_3G00251870 Rroxscaffold_3G00252200 Rroxscaffold_3G00252210 Rroxscaffold_4G00279970 Rroxscaffold_4G00299970 Rroxscaffold_4G00300760 Rroxscaffold_4G00300780 Rroxscaffold_4G00300810 Rroxscaffold_4G00300850 Rroxscaffold_4G00307080 Rroxscaffold_4G00307100 Rroxscaffold_4G00313990 Rroxscaffold_6G00405080
rosa_rugosa Rorug01G0193600 Rorug01G0193700 Rorug01G0243800 Rorug01G0244000 Rorug01G0244000 Rorug01G0244400 Rorug01G0414300.1 Rorug01G0414500 Rorug01G0414600 Rorug02G0235600 Rorug02G0307900 Rorug02G0583100 Rorug02G0583200 Rorug02G0583300 Rorug05G0398000 Rorug05G0398100 Rorug05G0398200 Rorug05G0580300 Rorug05G0590300 Rorug06G0116000 Rorug06G0116100 Rorug07G0096800 Rorug07G0097100.1 Rorug07G0097200 Rorug07G0098600 Rorug07G0098600 Rorug07G0098700 Rorug07G0099100 Rorug07G0106100 Rorug07G0106200 Rorug07G0106200 Rorug07G0106300 Rorug07G0157600 Rorug07G0157700 Rorug07G0157700 Rorug07G0157800
rosa_samantha Rh1AG255500 Rh1AG256700 Rh1BG225800 Rh1BG226200 Rh1BG230000 Rh1CG195300 Rh1CG238400 Rh1CG238500 Rh1CG238900 Rh1CG239000 Rh1CG239300 Rh1CG239400 Rh1CG239800 Rh1CG240000 Rh1CG240200 Rh1CG240300 Rh1CG244300 Rh1CG406900 Rh1CG407300 Rh1CG407400 Rh2CG343600 Rh2DG383200 Rh3BG205900 Rh4AG404400 Rh4BG415500 Rh5AG455200 Rh5AG455600 Rh5CG497000 Rh5CG497200 Rh7AG228800 Rh7AG230400 Rh7AG230800 Rh7AG231200 Rh7AG231600 Rh7AG231800 Rh7AG232100 Rh7AG241600 Rh7BG236200 Rh7CG238200 Rh7CG239100 Rh7CG243400 Rh7CG244900
rosa_wichuraiana Rw0G023040 Rw1G017780 Rw1G022320 Rw1G022340 Rw1G022410 Rw1G022420 Rw1G022440 Rw1G022460 Rw1G022490 Rw1G022500 Rw1G022530 Rw1G022550 Rw1G022560 Rw1G022600 Rw1G023060 Rw1G038150 Rw1G038160 Rw2G008210 Rw2G022350 Rw2G029290 Rw4G015050 Rw4G019850 Rw5G024060 Rw5G042460 Rw7G019160 Rw7G019460 Rw7G019690 Rw7G019830 Rw7G019860 Rw7G019880 Rw7G019890 Rw7G019930 Rw7G019990 Rw7G020460 Rw7G025100 Rw7G025120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 837, 1074
AasI GACNNNNNNGTC 1 cut(s) 1546
Acc65I GGTACC 1 cut(s) 1600
AccB1I GGYRCC 1 cut(s) 1600
AccB7I CCANNNNNTGG 1 cut(s) 473
AccI GTMKAC 1 cut(s) 2736
AciI CCGC 5 cut(s) 456, 1270, 1376, 1598, 2666
AclI AACGTT 1 cut(s) 971
AclWI GGATC 6 cut(s) 211, 984, 1287, 1350, 1506, 1719
AcoI YGGCCR 1 cut(s) 256
AcuI CTGAAG 3 cut(s) 361, 1991, 2595
AfaI GTAC 3 cut(s) 313, 808, 1602
AfiI CCNNNNNNNGG 4 cut(s) 473, 647, 1269, 1732
AflII CTTAAG 2 cut(s) 13, 2020
AhdI GACNNNNNGTC 1 cut(s) 2185
AhlI ACTAGT 1 cut(s) 1297
AjnI CCWGG 1 cut(s) 576
AjuI GAANNNNNNNTTGG 2 cut(s) 1526, 1558
AleI CACNNNNGTG 3 cut(s) 378, 1917, 2022
Alw26I GTCTC 2 cut(s) 365, 1632
AlwI GGATC 6 cut(s) 211, 984, 1287, 1350, 1506, 1719
Ama87I CYCGRG 1 cut(s) 395
AoxI GGCC 4 cut(s) 151, 256, 1373, 1620
ApeKI GCWGC 6 cut(s) 52, 490, 1677, 1692, 1830, 2797
ArsI GACNNNNNNTTYG 4 cut(s) 1610, 1642, 2554, 2586
AseI ATTAAT 2 cut(s) 101, 1151
Asp700I GAANNNNTTC 1 cut(s) 1667
Asp718I GGTACC 1 cut(s) 1600
AspS9I GGNCC 4 cut(s) 176, 580, 1373, 2549
AsuC2I CCSGG 1 cut(s) 180
AsuHPI GGTGA 1 cut(s) 1243
AsuII TTCGAA 1 cut(s) 1396
AvaI CYCGRG 1 cut(s) 395
AvaII GGWCC 3 cut(s) 176, 580, 2549
BaeI ACNNNNGTAYC 2 cut(s) 790, 823
BalI TGGCCA 1 cut(s) 258
BanI GGYRCC 1 cut(s) 1600
BarI GAAGNNNNNNTAC 2 cut(s) 1584, 1616
BauI CACGAG 1 cut(s) 155
BbsI GAAGAC 1 cut(s) 668
BbvCI CCTCAGC 1 cut(s) 599
BbvI GCAGC 6 cut(s) 39, 477, 1689, 1704, 1842, 2784
BciT130I CCWGG 1 cut(s) 578
BclI TGATCA 1 cut(s) 2790
BcnI CCSGG 1 cut(s) 180
BcoDI GTCTC 2 cut(s) 365, 1632
BcuI ACTAGT 1 cut(s) 1297
BfmI CTRYAG 2 cut(s) 670, 802
BfrI CTTAAG 2 cut(s) 13, 2020
BisI GCNGC 8 cut(s) 53, 491, 1271, 1376, 1678, 1693, 1831, 2798
BlsI GCNGC 8 cut(s) 54, 492, 1272, 1377, 1679, 1694, 1832, 2799
Bme1390I CCNGG 2 cut(s) 180, 578
Bme18I GGWCC 3 cut(s) 176, 580, 2549
BmeRI GACNNNNNGTC 1 cut(s) 2185
BmeT110I CYCGRG 1 cut(s) 395
BmgT120I GGNCC 4 cut(s) 176, 580, 1373, 2549
BmiI GGNNCC 7 cut(s) 178, 386, 551, 1326, 1374, 1602, 2101
BmrFI CCNGG 2 cut(s) 180, 578
BmrI ACTGGG 2 cut(s) 342, 1815
BmsI GCATC 1 cut(s) 2802
BmuI ACTGGG 2 cut(s) 342, 1815
BoxI GACNNNNGTC 1 cut(s) 672
BpiI GAAGAC 1 cut(s) 668
BplI GAGNNNNNCTC 2 cut(s) 1187, 1219
BpmI CTGGAG 1 cut(s) 1774
Bpu10I CCTNAGC 1 cut(s) 599
Bpu14I TTCGAA 1 cut(s) 1396
BpuEI CTTGAG 4 cut(s) 770, 1214, 1702, 2296
BpuMI CCSGG 1 cut(s) 180
Bsa29I ATCGAT 1 cut(s) 1147
BsaAI YACGTR 1 cut(s) 2734
BsaBI GATNNNNATC 1 cut(s) 2532
BsaJI CCNNGG 3 cut(s) 307, 2451, 2644
Bsc4I CCNNNNNNNGG 4 cut(s) 473, 647, 1269, 1732
Bse1I ACTGG 4 cut(s) 259, 337, 699, 1810
Bse3DI GCAATG 1 cut(s) 610
Bse8I GATNNNNATC 1 cut(s) 2532
BseBI CCWGG 1 cut(s) 578
BseCI ATCGAT 1 cut(s) 1147
BseDI CCNNGG 3 cut(s) 307, 2451, 2644
BseGI GGATG 3 cut(s) 941, 2159, 2239
BseJI GATNNNNATC 1 cut(s) 2532
BseLI CCNNNNNNNGG 4 cut(s) 473, 647, 1269, 1732
BseMI GCAATG 1 cut(s) 610
BseMII CTCAG 8 cut(s) 376, 520, 575, 613, 986, 1308, 1346, 1415
BseNI ACTGG 4 cut(s) 259, 337, 699, 1810
BseRI GAGGAG 1 cut(s) 672
BseXI GCAGC 6 cut(s) 39, 477, 1689, 1704, 1842, 2784
BseYI CCCAGC 1 cut(s) 1416
BsgI GTGCAG 1 cut(s) 1696
BshFI GGCC 4 cut(s) 153, 258, 1375, 1622
BshNI GGYRCC 1 cut(s) 1600
BshVI ATCGAT 1 cut(s) 1147
BsiHKCI CYCGRG 1 cut(s) 395
BsiSI CCGG 2 cut(s) 174, 180
BslI CCNNNNNNNGG 4 cut(s) 473, 647, 1269, 1732
BsmAI GTCTC 2 cut(s) 365, 1632
BsmI GAATGC 1 cut(s) 448
BsnI GGCC 4 cut(s) 153, 258, 1375, 1622
BsoBI CYCGRG 1 cut(s) 395
Bsp119I TTCGAA 1 cut(s) 1396
Bsp19I CCATGG 1 cut(s) 2644
BspACI CCGC 5 cut(s) 456, 1270, 1376, 1598, 2666
BspANI GGCC 4 cut(s) 153, 258, 1375, 1622
BspCNI CTCAG 8 cut(s) 375, 519, 576, 612, 987, 1309, 1347, 1414
BspDI ATCGAT 1 cut(s) 1147
BspLI GGNNCC 7 cut(s) 178, 386, 551, 1326, 1374, 1602, 2101
BspPI GGATC 6 cut(s) 211, 984, 1287, 1350, 1506, 1719
BspT104I TTCGAA 1 cut(s) 1396
BspT107I GGYRCC 1 cut(s) 1600
BspTI CTTAAG 2 cut(s) 13, 2020
BsrDI GCAATG 1 cut(s) 610
BsrI ACTGG 4 cut(s) 259, 337, 699, 1810
BssECI CCNNGG 3 cut(s) 307, 2451, 2644
BssNAI GTATAC 1 cut(s) 2737
BssSI CACGAG 1 cut(s) 155
BssT1I CCWWGG 2 cut(s) 2451, 2644
Bst1107I GTATAC 1 cut(s) 2737
Bst2BI CACGAG 1 cut(s) 155
Bst2UI CCWGG 1 cut(s) 578
Bst4CI ACNGT 4 cut(s) 242, 671, 742, 806
Bst6I CTCTTC 2 cut(s) 2291, 2511
BstAFI CTTAAG 2 cut(s) 13, 2020
BstAPI GCANNNNNTGC 2 cut(s) 137, 899
BstBAI YACGTR 1 cut(s) 2734
BstBI TTCGAA 1 cut(s) 1396
BstC8I GCNNGC 2 cut(s) 1422, 2587
BstDSI CCRYGG 1 cut(s) 2644
BstEII GGTNACC 1 cut(s) 2782
BstF5I GGATG 3 cut(s) 941, 2159, 2239
BstMAI GTCTC 2 cut(s) 365, 1632
BstMWI GCNNNNNNNGC 3 cut(s) 58, 137, 899
BstNI CCWGG 1 cut(s) 578
BstNSI RCATGY 1 cut(s) 1038
BstPAI GACNNNNGTC 1 cut(s) 672
BstPI GGTNACC 1 cut(s) 2782
BstSCI CCNGG 2 cut(s) 178, 576
BstSFI CTRYAG 2 cut(s) 670, 802
BstSNI TACGTA 1 cut(s) 2734
BstV1I GCAGC 6 cut(s) 39, 477, 1689, 1704, 1842, 2784
BstV2I GAAGAC 1 cut(s) 668
BstX2I RGATCY 5 cut(s) 976, 1279, 1342, 1498, 1711
BstXI CCANNNNNNTGG 3 cut(s) 1588, 2096, 2405
BstYI RGATCY 5 cut(s) 976, 1279, 1342, 1498, 1711
BstZ17I GTATAC 1 cut(s) 2737
Bsu15I ATCGAT 1 cut(s) 1147
BsuRI GGCC 4 cut(s) 153, 258, 1375, 1622
BsuTUI ATCGAT 1 cut(s) 1147
BtgI CCRYGG 1 cut(s) 2644
BtsCI GGATG 3 cut(s) 941, 2159, 2239
BtsI GCAGTG 1 cut(s) 1091
BtsIMutI CAGTG 4 cut(s) 330, 385, 1091, 1352
Cac8I GCNNGC 2 cut(s) 1422, 2587
Cfr13I GGNCC 4 cut(s) 176, 580, 1373, 2549
ClaI ATCGAT 1 cut(s) 1147
Csp6I GTAC 3 cut(s) 312, 807, 1601
CviQI GTAC 3 cut(s) 312, 807, 1601
DraI TTTAAA 1 cut(s) 570
DrdI GACNNNNNNGTC 1 cut(s) 1546
DriI GACNNNNNGTC 1 cut(s) 2185
DseDI GACNNNNNNGTC 1 cut(s) 1546
EaeI YGGCCR 1 cut(s) 256
Eam1104I CTCTTC 2 cut(s) 2291, 2511
Eam1105I GACNNNNNGTC 1 cut(s) 2185
EarI CTCTTC 2 cut(s) 2291, 2511
Eco105I TACGTA 1 cut(s) 2734
Eco130I CCWWGG 2 cut(s) 2451, 2644
Eco147I AGGCCT 1 cut(s) 153
Eco47I GGWCC 3 cut(s) 176, 580, 2549
Eco57I CTGAAG 3 cut(s) 361, 1991, 2595
Eco88I CYCGRG 1 cut(s) 395
Eco91I GGTNACC 1 cut(s) 2782
EcoO65I GGTNACC 1 cut(s) 2782
EcoRI GAATTC 2 cut(s) 1663, 2213
EcoRII CCWGG 1 cut(s) 576
EcoT14I CCWWGG 2 cut(s) 2451, 2644
ErhI CCWWGG 2 cut(s) 2451, 2644
FalI AAGNNNNNCTT 2 cut(s) 120, 152
FauNDI CATATG 1 cut(s) 2176
FbaI TGATCA 1 cut(s) 2790
FblI GTMKAC 1 cut(s) 2736
Fnu4HI GCNGC 8 cut(s) 53, 491, 1271, 1376, 1678, 1693, 1831, 2798
FokI GGATG 3 cut(s) 928, 2146, 2246
Fsp4HI GCNGC 8 cut(s) 53, 491, 1271, 1376, 1678, 1693, 1831, 2798
GluI GCNGC 8 cut(s) 53, 491, 1271, 1376, 1678, 1693, 1831, 2798
GsaI CCCAGC 1 cut(s) 1420
GsuI CTGGAG 1 cut(s) 1774
HaeIII GGCC 4 cut(s) 153, 258, 1375, 1622
HapII CCGG 2 cut(s) 174, 180
HincII GTYRAC 1 cut(s) 520
HindII GTYRAC 1 cut(s) 520
HindIII AAGCTT 1 cut(s) 10
HpaII CCGG 2 cut(s) 174, 180
HphI GGTGA 1 cut(s) 1243
Hpy166II GTNNAC 6 cut(s) 238, 520, 1001, 2268, 2549, 2737
Hpy8I GTNNAC 6 cut(s) 238, 520, 1001, 2268, 2549, 2737
HpyAV CCTTC 4 cut(s) 920, 1220, 1586, 1827
HpyCH4III ACNGT 4 cut(s) 242, 671, 742, 806
HpyCH4IV ACGT 3 cut(s) 971, 2186, 2733
HpyF10VI GCNNNNNNNGC 3 cut(s) 58, 137, 899
HpySE526I ACGT 3 cut(s) 971, 2186, 2733
KpnI GGTACC 1 cut(s) 1604
Ksp22I TGATCA 1 cut(s) 2790
LmnI GCTCC 7 cut(s) 27, 384, 555, 642, 858, 1583, 2028
Lsp1109I GCAGC 6 cut(s) 39, 477, 1689, 1704, 1842, 2784
LweI GCATC 1 cut(s) 2802
MaeII ACGT 3 cut(s) 971, 2186, 2733
MaeIII GTNAC 5 cut(s) 242, 336, 1089, 1790, 2782
MfeI CAATTG 1 cut(s) 1586
MflI RGATCY 5 cut(s) 976, 1279, 1342, 1498, 1711
MlsI TGGCCA 1 cut(s) 258
MluNI TGGCCA 1 cut(s) 258
MlyI GAGTC 3 cut(s) 367, 1556, 2122
MmeI TCCRAC 7 cut(s) 49, 719, 954, 1320, 1605, 1665, 2662
Mox20I TGGCCA 1 cut(s) 258
MroXI GAANNNNTTC 1 cut(s) 1667
MscI TGGCCA 1 cut(s) 258
MslI CAYNNNNRTG 6 cut(s) 378, 1917, 2022, 2066, 2175, 2660
Msp20I TGGCCA 1 cut(s) 258
MspCI CTTAAG 2 cut(s) 13, 2020
MspI CCGG 2 cut(s) 174, 180
MspR9I CCNGG 2 cut(s) 180, 578
MunI CAATTG 1 cut(s) 1586
Mva1269I GAATGC 1 cut(s) 448
MvaI CCWGG 1 cut(s) 578
MwoI GCNNNNNNNGC 3 cut(s) 58, 137, 899
NciI CCSGG 1 cut(s) 180
NcoI CCATGG 1 cut(s) 2644
NdeI CATATG 1 cut(s) 2176
NlaIV GGNNCC 7 cut(s) 178, 386, 551, 1326, 1374, 1602, 2101
NmuCI GTSAC 2 cut(s) 242, 1089
NspI RCATGY 1 cut(s) 1038
NspV TTCGAA 1 cut(s) 1396
OliI CACNNNNGTG 3 cut(s) 378, 1917, 2022
PceI AGGCCT 1 cut(s) 153
PctI GAATGC 1 cut(s) 448
PdmI GAANNNNTTC 1 cut(s) 1667
PfeI GAWTC 7 cut(s) 90, 2222, 2335, 2375, 2412, 2611, 2685
PflMI CCANNNNNTGG 1 cut(s) 473
PkrI GCNGC 8 cut(s) 54, 492, 1272, 1377, 1679, 1694, 1832, 2799
PleI GAGTC 3 cut(s) 366, 1555, 2122
PpsI GAGTC 3 cut(s) 366, 1555, 2122
Ppu21I YACGTR 1 cut(s) 2734
PshAI GACNNNNGTC 1 cut(s) 672
PshBI ATTAAT 2 cut(s) 101, 1151
PsiI TTATAA 2 cut(s) 837, 1074
Psp1406I AACGTT 1 cut(s) 971
Psp6I CCWGG 1 cut(s) 576
PspEI GGTNACC 1 cut(s) 2782
PspFI CCCAGC 1 cut(s) 1416
PspGI CCWGG 1 cut(s) 576
PspN4I GGNNCC 7 cut(s) 178, 386, 551, 1326, 1374, 1602, 2101
PspPI GGNCC 4 cut(s) 176, 580, 1373, 2549
PsrI GAACNNNNNNTAC 2 cut(s) 304, 336
PsuI RGATCY 5 cut(s) 976, 1279, 1342, 1498, 1711
RsaI GTAC 3 cut(s) 313, 808, 1602
RsaNI GTAC 3 cut(s) 312, 807, 1601
RseI CAYNNNNRTG 6 cut(s) 378, 1917, 2022, 2066, 2175, 2660
SatI GCNGC 8 cut(s) 53, 491, 1271, 1376, 1678, 1693, 1831, 2798
Sau96I GGNCC 4 cut(s) 176, 580, 1373, 2549
SchI GAGTC 3 cut(s) 367, 1556, 2122
ScrFI CCNGG 2 cut(s) 180, 578
SfaNI GCATC 1 cut(s) 2802
SfcI CTRYAG 2 cut(s) 670, 802
SfuI TTCGAA 1 cut(s) 1396
SinI GGWCC 3 cut(s) 176, 580, 2549
SmiMI CAYNNNNRTG 6 cut(s) 378, 1917, 2022, 2066, 2175, 2660
SmlI CTYRAG 6 cut(s) 13, 749, 1193, 1717, 2020, 2311
SmoI CTYRAG 6 cut(s) 13, 749, 1193, 1717, 2020, 2311
SnaBI TACGTA 1 cut(s) 2734
SpeI ACTAGT 1 cut(s) 1297
SseBI AGGCCT 1 cut(s) 153
SsiI CCGC 5 cut(s) 456, 1270, 1376, 1598, 2666
SspI AATATT 6 cut(s) 42, 353, 370, 783, 1026, 1046
StuI AGGCCT 1 cut(s) 153
StyD4I CCNGG 2 cut(s) 178, 576
StyI CCWWGG 2 cut(s) 2451, 2644
TaaI ACNGT 4 cut(s) 242, 671, 742, 806
TaiI ACGT 3 cut(s) 974, 2189, 2736
TaqI TCGA 7 cut(s) 268, 432, 440, 501, 1147, 1396, 1519
TauI GCSGC 2 cut(s) 1273, 1378
TfiI GAWTC 7 cut(s) 90, 2222, 2335, 2375, 2412, 2611, 2685
TscAI CASTG 4 cut(s) 337, 385, 1098, 1359
TseFI GTSAC 2 cut(s) 242, 1089
TseI GCWGC 6 cut(s) 52, 490, 1677, 1692, 1830, 2797
Tsp45I GTSAC 2 cut(s) 242, 1089
TspDTI ATGAA 9 cut(s) 552, 1104, 1441, 1956, 2099, 2163, 2236, 2309, 2489
TspRI CASTG 4 cut(s) 337, 385, 1098, 1359
Van91I CCANNNNNTGG 1 cut(s) 473
Vha464I CTTAAG 2 cut(s) 13, 2020
VpaK11BI GGWCC 3 cut(s) 176, 580, 2549
VspI ATTAAT 2 cut(s) 101, 1151
XbaI TCTAGA 3 cut(s) 823, 1222, 2189
XceI RCATGY 1 cut(s) 1038
XcmI CCANNNNNNNNNTGG 1 cut(s) 1464
XmiI GTMKAC 1 cut(s) 2736
XmnI GAANNNNTTC 1 cut(s) 1667
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.