RchiOBHm_Chr1g0379671

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
Physical Location & Seq
Reverse (-)
65667840 .. 65670806
2967 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ60298

Sequence Viewer

Length: 2967 bp
ATGCAGTTCGTAGTTATGAGTGGTAGATCATCCATACATTCTGGTTTTGTGTTGGCTTGGCTTCTAGTTCTATGGCTGGTCATCGTTTGGTCTGCCGCTATCTGTTGTTGTAGTTCCAGTGCTGCTAGGAATATCAGTCCTTCGAACGATGTTAATGTTCGGTGTATGGAGAGGGAAAAACATGCTCTTCTTCAGTTCAAGCAACGGTTGGTAGATGACTCAAATGCTCTAGCCTCTTGGGAAAGCAAGGAAGACTGTTGCAAGTGGAGAGGAATTGCTTGCGACAACCAAACAGGTCATGTCAATGTCATCAGGCTAGATTTCTACCATGATTCATCTGATTTTAACTATACTCCTTTAAGAGGTGAGATTAGTCCCTCACTACTTGAATTGCCATATCTATATTACTTGGACCTCGGTTTTAATGATTTTAGTGGAACGATTCCCAAGTTCATTGGTTCTTTGAGTCGGTTGAAAGTACTCGAACTTGGATCGAACAGTTTTAGCGGATCCATTCCTCCCCAACTTGGCAATCTATCCAATTTGCATACTCTTGATCTTTCATGGAACTTTGTTTTTACCTCTGAAAATATCGAGTGGGTATCTCAGCTTTCTTCCTTGAGATACTTGAACATGTCATTTCTTAATTTCTGCCGTGCTGTAAATTGGCCCCAATCTATAAGCCAGCTCCTTTCTCTGATAGAGCTTCGGTTAATTTCATGTGATCTCCCTGATGTTGATATGGCATCACTTTCCTTTACTAATTCTTCAACCTCTCTTCAAGTATTTCATCTCTCTGGTAATTTCCTGATCAGTTCTTCAATATTCTATTGGATAGGCAATGTCAGCAGAAACCTTGTTTCCATTGGCCTATCTTATAACAGGATTAAAGGTACTATCCCAGATGTTTTCACAAACATGGATTCTCTATTGACTCTTGACCTCTCTTCTAATCAACTTGAAGGTGGCATACCAAAATCCTTTCGAAGCCTATGCAGATTGGAAAACTTGTATTTATATTCAAACAATTTTTCTGACAGACTTGAACAATCTATAGGCAACTTGTCTTGTGCACAGGATACCCTTAAGTCACTCTACTTGCGTGATAATCTTTGGTGGGGGTCATTTCCTGATGATCTTACAAGGTTTGTATCCTTGGAAGAATTGCACATTGACAATGCCATAATGAGCGGGTCGCTCCCAGAGAGTTTTCAGCAACTTTCCCAGCTCAGAACCTTGAGTCTAGGTCATAACCGGTTAAGTGGCTCATTCCCAGATGTTACAGGTCTTGCGTTGTTATCATCAATAGATCTTTCCTATAATCAACTGAATGGCTCTCTACATGACAGTTTAGGTCAACTTTCCAGCCTTGCGCGAATCGATCTTTCTCGAAATTCTCTGAATGTTGTCTTAACTGAAGCCCACTTCTTGAACCTGTCTAAACTGCAGTATGTGGATGTTTCTTATAATCCAGCTTTTTCTTTCCATGTGAGCTTAAGTTGGAATCCTCCTTTTCAGCTTTATGATTTAAAGATGGCATCTTGCAAGGTCGGCCCTGCTTTTCCTAAATGGACTCTAACACAGAGAGAACTTTCTACACTTGATTTGTCTAACGCTGGGATATCAGATTCAATACCTGATAATTTTTGGGATCTAGCTTGCAGTTTACCTCTGTTAAATCTCTCTATCAACCAAATCCATGGAAAATTTCCGAATCTATCATCAAGAAACTGCAGCATTCCTTCTATTGACTTGAGGTCTAATCGTTTCTCTGGTGCAGTCCCACCATTTCACACAAATGTAGGCGCAGTGTGGCTCTCCAAAAACAAGTTTTCAGGGGACTTATCTTCCATATGTTCAACTCAGGCTCCAGAATTGCTTATACTCGACCTTTCTGATAATCTGCTATCAGGGGAACTCCCTAATTGTTGGGTTCAATTTCAAGGACTGGTCGCGTTGAATTTGGCGAACAATAGTTTCTCTGGGAAAATACCAAGCTCATTTGGTTCTTTAAAGTCTCTTTATCAATTACAATTACAACGTAACAATTTCTCAGGTGAACTGCCTTCTTTGGAGAACTGTACGGAGTTAGCTTTTGTTGACCTCGGATTCAATAACTTATCTGGAAAGATACAAGCATGGATAGGCAGCAGCCTTAAAAAGTTGTTGGTTCTACAATTAAGGTCAAACCATTTCTCTGGAAGCATTCCCACAAGTATATGCAGTCTACCGTTCATTCGTGTTTTGGACCTCTCTCAAAACAATATATCTGGAGCATTACCACATTGCCTCAACAATTTGACAGCTTTCTCTTCGGTTTCTCAGGAGGTGGATTATTTGTCATATCCTTCTGATTTTGTTTTACAACTTATTTGGAAAGGAGCAGAGACGGAGTATGGGAAGAACTTTAGGTATTTGAGGAGCATTGACATTTCAAGCAATAATTTAACTGGGGTGATTCCGGAAAACATAACATATATGCTTGGGTTGCGTTCTCTTAACCTTTCAAGAAACAGTTTGACTGGGGTCATTCCTGAAAAGTTTGGTCAATTGGAGGTGCTAGAAGTTCTTGATTTGTCAAGAAACCACCTATCTGGTAGTATTCCTGATAGTTTTAGGAACTTGCATTCTATAGCTGTCTTGAATTTATCGATCAACAACTTGTCAGGAAGAATTCCGTCCAGCACCCAACTTCTGACTTTTACTGAATCTTCATTCGCCGGAAATGTCGGACTTTGTGGGCCACAGCTAACAACAAAATGCCGGGGAGATAGATCAAGTGAAGATCCAAAAGTCACTGGTAGCACTGAAAGTGGTGAGAGTGAAAACGATAGTGATGGTTTCATAACACCAGGTTTTTATGTTGGCATAGGGATTGGATTCTTAATAGGATTTGTGGGAGTCTGCCTTGCTTTACCCCCTGAGACTTCTTGGAGATACGTGCAGCAGTGTTTAAGGCAAAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

988

Amino Acids

109.45

Weight (kDa)

5.58

Isoelectric Point (pI)

41.37

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 58 - 95 3.1e-12 Leucine rich repeat N-terminal domain
LRR_14 PF23598 123 - 243 1.8e-07 Leucine-rich repeat region
LRR_8 PF13855 132 - 190 1.5e-06 Leucine rich repeat
LRR_8 PF13855 284 - 344 1.2e-10 Leucine rich repeat
LRR_14 PF23598 362 - 536 1.3e-10 Leucine-rich repeat region
LRR_8 PF13855 385 - 443 4.3e-06 Leucine rich repeat
LRR_14 PF23598 801 - 885 2.1e-06 Leucine-rich repeat region
LRR_8 PF13855 805 - 864 1.7e-12 Leucine rich repeat
LRR_8 PF13855 830 - 888 2.4e-11 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000028)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g45420 FvH4_4g14031 FvH4_5g20780 FvH4_6g28530 FvH4_7g14020 FvH4_7g14030 FvH4_7g14040 FvH4_7g14050 FvH4_7g14060 FvH4_7g14070 FvH4_7g14090 FvH4_7g14110 FvH4_7g14140 FvH4_7g14450
malus_domestica MD00G1189100.v1.1 MD01G1018600.v1.1 MD01G1053800.v1.1 MD01G1053900.v1.1 MD01G1054000.v1.1 MD01G1054100.v1.1 MD01G1056700.v1.1 MD01G1057000.v1.1 MD01G1057300.v1.1 MD01G1057400.v1.1 MD01G1061600.v1.1 MD01G1061800.v1.1 MD01G1061900.v1.1 MD01G1062000.v1.1 MD01G1062400.v1.1 MD01G1062500.v1.1 MD01G1063200.v1.1 MD01G1063300.v1.1 MD01G1063400.v1.1 MD01G1063700.v1.1 MD01G1063900.v1.1 MD01G1064200.v1.1 MD01G1064300.v1.1 MD01G1064400.v1.1 MD01G1064600.v1.1 MD01G1064700.v1.1 MD01G1181100.v1.1 MD01G1212300.v1.1 MD01G1212500.v1.1 MD01G1212600.v1.1 MD02G1271900.v1.1 MD07G1136500.v1.1 MD07G1139300.v1.1 MD07G1141200.v1.1 MD07G1144700.v1.1 MD08G1144200.v1.1 MD14G1186300.v1.1 MD14G1186500.v1.1 MD14G1186700.v1.1 MD14G1186800.v1.1 MD15G1351300.v1.1 MD15G1439500.v1.1
prunus_persica Prupe.1G067000_v2.0.a1 Prupe.2G077400_v2.0.a1 Prupe.2G077700_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078600_v2.0.a1 Prupe.2G078800_v2.0.a1 Prupe.2G099600_v2.0.a1 Prupe.2G099700_v2.0.a1 Prupe.2G155100_v2.0.a1 Prupe.2G155500_v2.0.a1 Prupe.2G155600_v2.0.a1 Prupe.2G155800_v2.0.a1 Prupe.2G155900_v2.0.a1 Prupe.2G156100_v2.0.a1 Prupe.2G166100_v2.0.a1 Prupe.2G166300_v2.0.a1 Prupe.2G167500_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G168400_v2.0.a1 Prupe.2G168700_v2.0.a1 Prupe.2G168800_v2.0.a1 Prupe.2G169000_v2.0.a1 Prupe.2G169100_v2.0.a1 Prupe.2G169200_v2.0.a1 Prupe.2G169500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G172300_v2.0.a1 Prupe.2G304800_v2.0.a1 Prupe.4G264800_v2.0.a1 Prupe.4G265000_v2.0.a1 Prupe.5G051900_v2.0.a1 Prupe.5G052000_v2.0.a1
pyrus_communis pycom01g08380 pycom01g08430 pycom01g08490 pycom01g08520 pycom01g08540 pycom01g08550 pycom01g08600 pycom01g08630 pycom01g08660 pycom01g08720 pycom01g09180 pycom01g09200 pycom01g09210 pycom01g09270 pycom01g09280 pycom01g09300 pycom01g09380 pycom01g19110 pycom01g22260 pycom01g22310 pycom01g22330 pycom01g22350 pycom01g22360 pycom02g23250 pycom07g13420 pycom07g13670 pycom07g13900 pycom07g13910 pycom07g13960 pycom07g13970 pycom07g25680 pycom11g22830
rosa_chinensis RchiOBHm_Chr0c22g0500431 RchiOBHm_Chr0c22g0500441 RchiOBHm_Chr0c22g0500561 RchiOBHm_Chr0c22g0500571 RchiOBHm_Chr0c22g0500611 RchiOBHm_Chr0c22g0500621 RchiOBHm_Chr0c22g0500631 RchiOBHm_Chr0c22g0500681 RchiOBHm_Chr1g0348221 RchiOBHm_Chr1g0348251 RchiOBHm_Chr1g0352861 RchiOBHm_Chr1g0352871 RchiOBHm_Chr1g0352891 RchiOBHm_Chr1g0352901 RchiOBHm_Chr1g0354671 RchiOBHm_Chr1g0354701 RchiOBHm_Chr1g0354711 RchiOBHm_Chr1g0354751 RchiOBHm_Chr1g0354761 RchiOBHm_Chr1g0354841 RchiOBHm_Chr1g0354851 RchiOBHm_Chr1g0354881 RchiOBHm_Chr1g0354971 RchiOBHm_Chr1g0354981 RchiOBHm_Chr1g0354991 RchiOBHm_Chr1g0355001 RchiOBHm_Chr1g0355011 RchiOBHm_Chr1g0355021 RchiOBHm_Chr1g0355861 RchiOBHm_Chr1g0379671 RchiOBHm_Chr1g0379681 RchiOBHm_Chr2g0096591 RchiOBHm_Chr2g0132821 RchiOBHm_Chr3g0454901 RchiOBHm_Chr3g0472711 RchiOBHm_Chr4g0400791 RchiOBHm_Chr5g0069481 RchiOBHm_Chr5g0069511 RchiOBHm_Chr5g0069551 RchiOBHm_Chr6g0254651 RchiOBHm_Chr6g0259721 RchiOBHm_Chr7g0205911 RchiOBHm_Chr7g0206401 RchiOBHm_Chr7g0206571 RchiOBHm_Chr7g0206581 RchiOBHm_Chr7g0206621 RchiOBHm_Chr7g0206631 RchiOBHm_Chr7g0206641 RchiOBHm_Chr7g0206681 RchiOBHm_Chr7g0206691 RchiOBHm_Chr7g0206751 RchiOBHm_Chr7g0206761 RchiOBHm_Chr7g0206851 RchiOBHm_Chr7g0206911 RchiOBHm_Chr7g0206921 RchiOBHm_Chr7g0207001 RchiOBHm_Chr7g0207011 RchiOBHm_Chr7g0207031 RchiOBHm_Chr7g0207101 RchiOBHm_Chr7g0207161 RchiOBHm_Chr7g0207201 RchiOBHm_Chr7g0207271 RchiOBHm_Chr7g0207301 RchiOBHm_Chr7g0207311 RchiOBHm_Chr7g0207421 RchiOBHm_Chr7g0207481 RchiOBHm_Chr7g0207491 RchiOBHm_Chr7g0207501 RchiOBHm_Chr7g0207521 RchiOBHm_Chr7g0207531 RchiOBHm_Chr7g0207561 RchiOBHm_Chr7g0207571 RchiOBHm_Chr7g0207581 RchiOBHm_Chr7g0207601 RchiOBHm_Chr7g0207621 RchiOBHm_Chr7g0207631 RchiOBHm_Chr7g0207651 RchiOBHm_Chr7g0207661 RchiOBHm_Chr7g0207711 RchiOBHm_Chr7g0207761 RchiOBHm_Chr7g0207801 RchiOBHm_Chr7g0208821 RchiOBHm_Chr7g0208831 RchiOBHm_Chr7g0208841 RchiOBHm_Chr7g0213601 RchiOBHm_Chr7g0215981 RchiOBHm_Chr7g0216021
rosa_laevigata RLG00000003193 RLG00000003194 RLG00000003287 RLG00000003288 RLG00000003289 RLG00000003293 RLG00000003294 RLG00000003295 RLG00000003297 RLG00000003299 RLG00000003301 RLG00000003327 RLG00000003347 RLG00000016653 RLG00000018642 RLG00000018643 RLG00000019285 RLG00000022542 RLG00000026368 RLG00000026371 RLG00000028124 RLG00000028125 RLG00000028183 RLG00000028184 RLG00000028185 RLG00000028188 RLG00000028673 RLG00000029267 RLG00000029325 RLG00000029674 RLG00000032883 RLG00000036055 RLG00000036058 RLG00000036065 RLG00000036068 RLG00000036071 RLG00000036072 RLG00000036075 RLG00000036076
rosa_multiflora Rmu_co8250183.1_g000001 Rmu_co8271981.1_g000001 Rmu_co8410829.1_g000001 Rmu_co8432879.1_g000001 Rmu_co8441941.1_g000001 Rmu_sc0000076.1_g000031 Rmu_sc0000738.1_g000038 Rmu_sc0000848.1_g000003 Rmu_sc0000848.1_g000014 Rmu_sc0000848.1_g000015 Rmu_sc0000848.1_g000016 Rmu_sc0001264.1_g000001 Rmu_sc0002284.1_g000018 Rmu_sc0002356.1_g000011 Rmu_sc0003020.1_g000003 Rmu_sc0003115.1_g000001 Rmu_sc0003115.1_g000002 Rmu_sc0003115.1_g000003 Rmu_sc0003115.1_g000004 Rmu_sc0003115.1_g000005 Rmu_sc0003115.1_g000008 Rmu_sc0003115.1_g000010 Rmu_sc0003115.1_g000011 Rmu_sc0003115.1_g000014 Rmu_sc0003565.1_g000002 Rmu_sc0003652.1_g000013 Rmu_sc0003652.1_g000015 Rmu_sc0003652.1_g000016 Rmu_sc0003652.1_g000019 Rmu_sc0003940.1_g000001 Rmu_sc0003940.1_g000004 Rmu_sc0003940.1_g000009 Rmu_sc0004084.1_g000010 Rmu_sc0004705.1_g000021 Rmu_sc0004972.1_g000007 Rmu_sc0004987.1_g000002 Rmu_sc0004987.1_g000006 Rmu_sc0005065.1_g000018 Rmu_sc0005065.1_g000029 Rmu_sc0005391.1_g000002 Rmu_sc0005633.1_g000003 Rmu_sc0005633.1_g000008 Rmu_sc0006632.1_g000014 Rmu_sc0006632.1_g000018 Rmu_sc0006681.1_g000010 Rmu_sc0006681.1_g000011 Rmu_sc0006733.1_g000003 Rmu_sc0007385.1_g000005 Rmu_sc0007385.1_g000007 Rmu_sc0007385.1_g000009 Rmu_sc0007385.1_g000016 Rmu_sc0007645.1_g000002 Rmu_sc0007645.1_g000003 Rmu_sc0007645.1_g000022 Rmu_sc0007828.1_g000008 Rmu_sc0008509.1_g000003 Rmu_sc0008509.1_g000015 Rmu_sc0008509.1_g000016 Rmu_sc0008509.1_g000020 Rmu_sc0008509.1_g000030 Rmu_sc0008509.1_g000041 Rmu_sc0008756.1_g000001 Rmu_sc0008756.1_g000003 Rmu_sc0013028.1_g000002 Rmu_sc0013028.1_g000003 Rmu_sc0013028.1_g000005 Rmu_sc0013160.1_g000001 Rmu_sc0014454.1_g000009 Rmu_sc0014455.1_g000007 Rmu_sc0014659.1_g000004 Rmu_sc0017798.1_g000002 Rmu_sc0017798.1_g000004 Rmu_sc0029608.1_g000001 Rmu_sc0037861.1_g000001 Rmu_sc0038750.1_g000001 Rmu_sc0042995.1_g000001 Rmu_ssc0000161.1_g000017
rosa_roxburghii Rroxscaffold_1G00009180 Rroxscaffold_1G00009190 Rroxscaffold_1G00011450 Rroxscaffold_1G00011480 Rroxscaffold_2G00111660 Rroxscaffold_2G00113570 Rroxscaffold_2G00122140 Rroxscaffold_3G00243730 Rroxscaffold_3G00245750 Rroxscaffold_3G00245760 Rroxscaffold_3G00250220 Rroxscaffold_3G00251160 Rroxscaffold_3G00251270 Rroxscaffold_3G00251280 Rroxscaffold_3G00251300 Rroxscaffold_3G00251340 Rroxscaffold_3G00251350 Rroxscaffold_3G00251390 Rroxscaffold_3G00251400 Rroxscaffold_3G00251560 Rroxscaffold_3G00251570 Rroxscaffold_3G00251870 Rroxscaffold_3G00252200 Rroxscaffold_3G00252210 Rroxscaffold_4G00279970 Rroxscaffold_4G00299970 Rroxscaffold_4G00300760 Rroxscaffold_4G00300780 Rroxscaffold_4G00300810 Rroxscaffold_4G00300850 Rroxscaffold_4G00307080 Rroxscaffold_4G00307100 Rroxscaffold_4G00313990 Rroxscaffold_6G00405080
rosa_rugosa Rorug01G0193600 Rorug01G0193700 Rorug01G0243800 Rorug01G0244000 Rorug01G0244000 Rorug01G0244400 Rorug01G0414300.1 Rorug01G0414500 Rorug01G0414600 Rorug02G0235600 Rorug02G0307900 Rorug02G0583100 Rorug02G0583200 Rorug02G0583300 Rorug05G0398000 Rorug05G0398100 Rorug05G0398200 Rorug05G0580300 Rorug05G0590300 Rorug06G0116000 Rorug06G0116100 Rorug07G0096800 Rorug07G0097100.1 Rorug07G0097200 Rorug07G0098600 Rorug07G0098600 Rorug07G0098700 Rorug07G0099100 Rorug07G0106100 Rorug07G0106200 Rorug07G0106200 Rorug07G0106300 Rorug07G0157600 Rorug07G0157700 Rorug07G0157700 Rorug07G0157800
rosa_samantha Rh1AG255500 Rh1AG256700 Rh1BG225800 Rh1BG226200 Rh1BG230000 Rh1CG195300 Rh1CG238400 Rh1CG238500 Rh1CG238900 Rh1CG239000 Rh1CG239300 Rh1CG239400 Rh1CG239800 Rh1CG240000 Rh1CG240200 Rh1CG240300 Rh1CG244300 Rh1CG406900 Rh1CG407300 Rh1CG407400 Rh2CG343600 Rh2DG383200 Rh3BG205900 Rh4AG404400 Rh4BG415500 Rh5AG455200 Rh5AG455600 Rh5CG497000 Rh5CG497200 Rh7AG228800 Rh7AG230400 Rh7AG230800 Rh7AG231200 Rh7AG231600 Rh7AG231800 Rh7AG232100 Rh7AG241600 Rh7BG236200 Rh7CG238200 Rh7CG239100 Rh7CG243400 Rh7CG244900
rosa_wichuraiana Rw0G023040 Rw1G017780 Rw1G022320 Rw1G022340 Rw1G022410 Rw1G022420 Rw1G022440 Rw1G022460 Rw1G022490 Rw1G022500 Rw1G022530 Rw1G022550 Rw1G022560 Rw1G022600 Rw1G023060 Rw1G038150 Rw1G038160 Rw2G008210 Rw2G022350 Rw2G029290 Rw4G015050 Rw4G019850 Rw5G024060 Rw5G042460 Rw7G019160 Rw7G019460 Rw7G019690 Rw7G019830 Rw7G019860 Rw7G019880 Rw7G019890 Rw7G019930 Rw7G019990 Rw7G020460 Rw7G025100 Rw7G025120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 879, 1467
AccBSI CCGCTC 1 cut(s) 1191
AccI GTMKAC 1 cut(s) 2227
AccII CGCG 2 cut(s) 1375, 1955
AccIII TCCGGA 1 cut(s) 2461
AciI CCGC 3 cut(s) 96, 507, 1191
AclWI GGATC 5 cut(s) 499, 504, 517, 1659, 2780
AcsI RAATTY 5 cut(s) 1393, 1706, 1960, 2644, 2673
AcuI CTGAAG 2 cut(s) 176, 1437
AfaI GTAC 3 cut(s) 480, 895, 2083
AfiI CCNNNNNNNGG 2 cut(s) 362, 527
AflII CTTAAG 2 cut(s) 1085, 1495
AflIII ACRYGT 1 cut(s) 633
AgeI ACCGGT 1 cut(s) 1254
AhdI GACNNNNNGTC 1 cut(s) 1756
AjnI CCWGG 1 cut(s) 2851
Alw21I GWGCWC 1 cut(s) 1075
Alw26I GTCTC 3 cut(s) 2022, 2381, 2918
Alw44I GTGCAC 1 cut(s) 1071
AlwI GGATC 5 cut(s) 499, 504, 517, 1659, 2780
Aor13HI TCCGGA 1 cut(s) 2461
AoxI GGCC 4 cut(s) 668, 868, 1552, 2741
ApaLI GTGCAC 1 cut(s) 1071
ApeKI GCWGC 5 cut(s) 122, 1734, 2148, 2151, 2944
ApoI RAATTY 5 cut(s) 1393, 1706, 1960, 2644, 2673
AsiGI ACCGGT 1 cut(s) 1254
AspLEI GCGC 2 cut(s) 1375, 1808
AspS9I GGNCC 5 cut(s) 412, 669, 1553, 2248, 2741
AsuC2I CCSGG 1 cut(s) 2765
AsuHPI GGTGA 4 cut(s) 377, 2069, 2467, 2828
AsuII TTCGAA 2 cut(s) 143, 985
AvaII GGWCC 2 cut(s) 412, 2248
BaeGI GKGCMC 1 cut(s) 1075
BamHI GGATCC 1 cut(s) 509
BarI GAAGNNNNNNTAC 2 cut(s) 954, 986
BbsI GAAGAC 1 cut(s) 258
Bbv12I GWGCWC 1 cut(s) 1075
BbvI GCAGC 5 cut(s) 109, 1746, 2160, 2163, 2956
BccI CCATC 2 cut(s) 1528, 2831
BceAI ACGGC 1 cut(s) 639
BcgI CGANNNNNNTGC 2 cut(s) 975, 1009
BciT130I CCWGG 1 cut(s) 2853
BciVI GTATCC 2 cut(s) 1072, 1162
BclI TGATCA 1 cut(s) 810
BcnI CCSGG 1 cut(s) 2765
BcoDI GTCTC 3 cut(s) 2022, 2381, 2918
BfaI CTAG 7 cut(s) 65, 126, 230, 317, 1244, 1655, 2561
BfmI CTRYAG 4 cut(s) 1053, 1445, 1732, 2631
BfrI CTTAAG 2 cut(s) 1085, 1495
BfuI GTATCC 2 cut(s) 1072, 1162
BglII AGATCT 1 cut(s) 1309
BisI GCNGC 6 cut(s) 96, 123, 1735, 2149, 2152, 2945
BlsI GCNGC 6 cut(s) 97, 124, 1736, 2150, 2153, 2946
BmcAI AGTACT 1 cut(s) 480
Bme1390I CCNGG 2 cut(s) 2765, 2853
Bme18I GGWCC 2 cut(s) 412, 2248
BmeRI GACNNNNNGTC 1 cut(s) 1756
BmgT120I GGNCC 5 cut(s) 412, 669, 1553, 2248, 2741
BmiI GGNNCC 3 cut(s) 511, 671, 1869
BmrFI CCNGG 2 cut(s) 2765, 2853
BmrI ACTGGG 2 cut(s) 2460, 2532
BmsI GCATC 2 cut(s) 755, 1547
BmuI ACTGGG 2 cut(s) 2460, 2532
BoxI GACNNNNGTC 1 cut(s) 2525
BpiI GAAGAC 1 cut(s) 258
BpmI CTGGAG 2 cut(s) 1854, 2292
Bpu14I TTCGAA 2 cut(s) 143, 985
BpuEI CTTGAG 3 cut(s) 640, 1258, 1774
BpuMI CCSGG 1 cut(s) 2765
Bsa29I ATCGAT 2 cut(s) 1380, 2651
BsaAI YACGTR 1 cut(s) 2941
BsaJI CCNNGG 5 cut(s) 415, 1155, 1699, 2104, 2764
BsaWI WCCGGW 2 cut(s) 1254, 2461
BsaXI ACNNNNNCTCC 2 cut(s) 1852, 1882
Bsc4I CCNNNNNNNGG 2 cut(s) 362, 527
Bse118I RCCGGY 1 cut(s) 1254
Bse1I ACTGG 5 cut(s) 117, 1953, 2455, 2527, 2803
Bse3DI GCAATG 2 cut(s) 847, 2284
BseAI TCCGGA 1 cut(s) 2461
BseBI CCWGG 1 cut(s) 2853
BseCI ATCGAT 2 cut(s) 1380, 2651
BseDI CCNNGG 5 cut(s) 415, 1155, 1699, 2104, 2764
BseGI GGATG 2 cut(s) 29, 1462
BseLI CCNNNNNNNGG 2 cut(s) 362, 527
BseMI GCAATG 2 cut(s) 847, 2284
BseMII CTCAG 6 cut(s) 620, 1243, 1877, 2067, 2336, 2913
BseNI ACTGG 5 cut(s) 117, 1953, 2455, 2527, 2803
BseRI GAGGAG 1 cut(s) 2434
BseSI GKGCMC 1 cut(s) 1075
BseXI GCAGC 5 cut(s) 109, 1746, 2160, 2163, 2956
BseYI CCCAGC 2 cut(s) 1224, 1616
BsgI GTGCAG 2 cut(s) 1797, 2963
Bsh1236I CGCG 2 cut(s) 1375, 1955
BshFI GGCC 4 cut(s) 670, 870, 1554, 2743
BshTI ACCGGT 1 cut(s) 1254
BshVI ATCGAT 2 cut(s) 1380, 2651
BsiHKAI GWGCWC 1 cut(s) 1075
BsiSI CCGG 4 cut(s) 1255, 2462, 2721, 2764
BslFI GGGAC 3 cut(s) 360, 1766, 1853
BslI CCNNNNNNNGG 2 cut(s) 362, 527
BsmAI GTCTC 3 cut(s) 2022, 2381, 2918
BsmBI CGTCTC 1 cut(s) 2381
BsmFI GGGAC 3 cut(s) 360, 1766, 1853
BsmI GAATGC 3 cut(s) 1737, 2205, 2626
BsnI GGCC 4 cut(s) 670, 870, 1554, 2743
Bsp119I TTCGAA 2 cut(s) 143, 985
Bsp1286I GDGCHC 1 cut(s) 1075
Bsp13I TCCGGA 1 cut(s) 2461
Bsp19I CCATGG 1 cut(s) 1699
BspACI CCGC 3 cut(s) 96, 507, 1191
BspANI GGCC 4 cut(s) 670, 870, 1554, 2743
BspCNI CTCAG 6 cut(s) 619, 1242, 1876, 2066, 2335, 2914
BspDI ATCGAT 2 cut(s) 1380, 2651
BspEI TCCGGA 1 cut(s) 2461
BspFNI CGCG 2 cut(s) 1375, 1955
BspLI GGNNCC 3 cut(s) 511, 671, 1869
BspMAI CTGCAG 2 cut(s) 1449, 1736
BspPI GGATC 5 cut(s) 499, 504, 517, 1659, 2780
BspQI GCTCTTC 1 cut(s) 192
BspT104I TTCGAA 2 cut(s) 143, 985
BspTI CTTAAG 2 cut(s) 1085, 1495
BsrBI CCGCTC 1 cut(s) 1191
BsrDI GCAATG 2 cut(s) 847, 2284
BsrFI RCCGGY 1 cut(s) 1254
BsrI ACTGG 5 cut(s) 117, 1953, 2455, 2527, 2803
BssAI RCCGGY 1 cut(s) 1254
BssECI CCNNGG 5 cut(s) 415, 1155, 1699, 2104, 2764
BssT1I CCWWGG 2 cut(s) 1155, 1699
Bst2UI CCWGG 1 cut(s) 2853
Bst4CI ACNGT 7 cut(s) 207, 257, 500, 1349, 2081, 2232, 2516
Bst6I CTCTTC 4 cut(s) 192, 783, 952, 2317
BstAFI CTTAAG 2 cut(s) 1085, 1495
BstBAI YACGTR 1 cut(s) 2941
BstBI TTCGAA 2 cut(s) 143, 985
BstC8I GCNNGC 3 cut(s) 280, 686, 1660
BstDEI CTNAG 6 cut(s) 606, 1229, 1863, 2053, 2322, 2922
BstDSI CCRYGG 1 cut(s) 1699
BstENI CCTNNNNNAGG 1 cut(s) 360
BstF5I GGATG 2 cut(s) 29, 1462
BstFNI CGCG 2 cut(s) 1375, 1955
BstHHI GCGC 2 cut(s) 1375, 1808
BstMAI GTCTC 3 cut(s) 2022, 2381, 2918
BstMWI GCNNNNNNNGC 3 cut(s) 846, 1551, 2488
BstNI CCWGG 1 cut(s) 2853
BstNSI RCATGY 2 cut(s) 185, 637
BstPAI GACNNNNGTC 1 cut(s) 2525
BstSCI CCNGG 2 cut(s) 2763, 2851
BstSFI CTRYAG 4 cut(s) 1053, 1445, 1732, 2631
BstSLI GKGCMC 1 cut(s) 1075
BstUI CGCG 2 cut(s) 1375, 1955
BstV1I GCAGC 5 cut(s) 109, 1746, 2160, 2163, 2956
BstV2I GAAGAC 1 cut(s) 258
BstX2I RGATCY 4 cut(s) 509, 1309, 1651, 2785
BstXI CCANNNNNNTGG 3 cut(s) 1700, 2198, 2594
BstYI RGATCY 4 cut(s) 509, 1309, 1651, 2785
Bsu15I ATCGAT 2 cut(s) 1380, 2651
BsuI GTATCC 2 cut(s) 1072, 1162
BsuRI GGCC 4 cut(s) 670, 870, 1554, 2743
BsuTUI ATCGAT 2 cut(s) 1380, 2651
BtgI CCRYGG 1 cut(s) 1699
BtsCI GGATG 2 cut(s) 29, 1462
BtsI GCAGTG 2 cut(s) 1815, 2954
BtsIMutI CAGTG 5 cut(s) 124, 1815, 2796, 2805, 2954
Cac8I GCNNGC 3 cut(s) 280, 686, 1660
CfoI GCGC 2 cut(s) 1375, 1808
Cfr10I RCCGGY 1 cut(s) 1254
Cfr13I GGNCC 5 cut(s) 412, 669, 1553, 2248, 2741
ClaI ATCGAT 2 cut(s) 1380, 2651
CsiI ACCWGGT 1 cut(s) 2851
Csp6I GTAC 3 cut(s) 479, 894, 2082
CspAI ACCGGT 1 cut(s) 1254
CviQI GTAC 3 cut(s) 479, 894, 2082
DdeI CTNAG 6 cut(s) 606, 1229, 1863, 2053, 2322, 2922
DraI TTTAAA 2 cut(s) 1530, 2013
DriI GACNNNNNGTC 1 cut(s) 1756
Eam1104I CTCTTC 4 cut(s) 192, 783, 952, 2317
Eam1105I GACNNNNNGTC 1 cut(s) 1756
EarI CTCTTC 4 cut(s) 192, 783, 952, 2317
Eco130I CCWWGG 2 cut(s) 1155, 1699
Eco32I GATATC 1 cut(s) 1623
Eco47I GGWCC 2 cut(s) 412, 2248
Eco57I CTGAAG 2 cut(s) 176, 1437
EcoNI CCTNNNNNAGG 1 cut(s) 360
EcoRI GAATTC 1 cut(s) 2673
EcoRII CCWGG 1 cut(s) 2851
EcoRV GATATC 1 cut(s) 1623
EcoT14I CCWWGG 2 cut(s) 1155, 1699
ErhI CCWWGG 2 cut(s) 1155, 1699
Esp3I CGTCTC 1 cut(s) 2381
FaqI GGGAC 3 cut(s) 360, 1766, 1853
FauI CCCGC 1 cut(s) 1184
FauNDI CATATG 1 cut(s) 1853
FbaI TGATCA 1 cut(s) 810
FblI GTMKAC 1 cut(s) 2227
Fnu4HI GCNGC 6 cut(s) 96, 123, 1735, 2149, 2152, 2945
FokI GGATG 2 cut(s) 16, 1469
Fsp4HI GCNGC 6 cut(s) 96, 123, 1735, 2149, 2152, 2945
FspBI CTAG 7 cut(s) 65, 126, 230, 317, 1244, 1655, 2561
GlaI GCGC 2 cut(s) 1374, 1807
GluI GCNGC 6 cut(s) 96, 123, 1735, 2149, 2152, 2945
GsaI CCCAGC 2 cut(s) 1228, 1620
GsuI CTGGAG 2 cut(s) 1854, 2292
HaeIII GGCC 4 cut(s) 670, 870, 1554, 2743
HapII CCGG 4 cut(s) 1255, 2462, 2721, 2764
HhaI GCGC 2 cut(s) 1375, 1808
Hin6I GCGC 2 cut(s) 1373, 1806
HinP1I GCGC 2 cut(s) 1373, 1806
HincII GTYRAC 2 cut(s) 1358, 2101
HindII GTYRAC 2 cut(s) 1358, 2101
HpaII CCGG 4 cut(s) 1255, 2462, 2721, 2764
HphI GGTGA 4 cut(s) 377, 2069, 2467, 2828
Hpy166II GTNNAC 6 cut(s) 1073, 1358, 1667, 2060, 2101, 2228
Hpy8I GTNNAC 6 cut(s) 1073, 1358, 1667, 2060, 2101, 2228
HpyAV CCTTC 5 cut(s) 150, 956, 1752, 2076, 2358
HpyCH4III ACNGT 7 cut(s) 207, 257, 500, 1349, 2081, 2232, 2516
HpyCH4IV ACGT 2 cut(s) 2041, 2940
HpyF10VI GCNNNNNNNGC 3 cut(s) 846, 1551, 2488
HpyF3I CTNAG 6 cut(s) 606, 1229, 1863, 2053, 2322, 2922
HpySE526I ACGT 2 cut(s) 2041, 2940
HspAI GCGC 2 cut(s) 1373, 1806
Kpn2I TCCGGA 1 cut(s) 2461
Ksp22I TGATCA 1 cut(s) 810
LguI GCTCTTC 1 cut(s) 192
LmnI GCTCC 6 cut(s) 693, 1203, 1873, 2273, 2381, 2421
Lsp1109I GCAGC 5 cut(s) 109, 1746, 2160, 2163, 2956
LweI GCATC 2 cut(s) 755, 1547
MabI ACCWGGT 1 cut(s) 2851
MaeI CTAG 7 cut(s) 65, 126, 230, 317, 1244, 1655, 2561
MaeII ACGT 2 cut(s) 2041, 2940
MaeIII GTNAC 4 cut(s) 1089, 1279, 2042, 2794
MbiI CCGCTC 1 cut(s) 1191
MfeI CAATTG 1 cut(s) 2549
MflI RGATCY 4 cut(s) 509, 1309, 1651, 2785
MhlI GDGCHC 1 cut(s) 1075
MlyI GAGTC 6 cut(s) 212, 475, 928, 1249, 1567, 2910
MmeI TCCRAC 2 cut(s) 1481, 2710
MroI TCCGGA 1 cut(s) 2461
MslI CAYNNNNRTG 3 cut(s) 303, 917, 1797
MspCI CTTAAG 2 cut(s) 1085, 1495
MspI CCGG 4 cut(s) 1255, 2462, 2721, 2764
MspR9I CCNGG 2 cut(s) 2765, 2853
MunI CAATTG 1 cut(s) 2549
Mva1269I GAATGC 3 cut(s) 1737, 2205, 2626
MvaI CCWGG 1 cut(s) 2853
MvnI CGCG 2 cut(s) 1375, 1955
MwoI GCNNNNNNNGC 3 cut(s) 846, 1551, 2488
NciI CCSGG 1 cut(s) 2765
NcoI CCATGG 1 cut(s) 1699
NdeI CATATG 1 cut(s) 1853
NlaIV GGNNCC 3 cut(s) 511, 671, 1869
NmuCI GTSAC 2 cut(s) 1089, 2794
NspI RCATGY 2 cut(s) 185, 637
NspV TTCGAA 2 cut(s) 143, 985
PciI ACATGT 1 cut(s) 633
PciSI GCTCTTC 1 cut(s) 192
PctI GAATGC 3 cut(s) 1737, 2205, 2626
PinAI ACCGGT 1 cut(s) 1254
PkrI GCNGC 6 cut(s) 97, 124, 1736, 2150, 2153, 2946
PleI GAGTC 6 cut(s) 212, 474, 928, 1248, 1567, 2909
PpsI GAGTC 6 cut(s) 212, 474, 928, 1248, 1567, 2909
Ppu21I YACGTR 1 cut(s) 2941
PscI ACATGT 1 cut(s) 633
PshAI GACNNNNGTC 1 cut(s) 2525
PsiI TTATAA 2 cut(s) 879, 1467
Psp6I CCWGG 1 cut(s) 2851
PspFI CCCAGC 2 cut(s) 1224, 1616
PspGI CCWGG 1 cut(s) 2851
PspN4I GGNNCC 3 cut(s) 511, 671, 1869
PspPI GGNCC 5 cut(s) 412, 669, 1553, 2248, 2741
PstI CTGCAG 2 cut(s) 1449, 1736
PsuI RGATCY 4 cut(s) 509, 1309, 1651, 2785
RsaI GTAC 3 cut(s) 480, 895, 2083
RsaNI GTAC 3 cut(s) 479, 894, 2082
RseI CAYNNNNRTG 3 cut(s) 303, 917, 1797
SapI GCTCTTC 1 cut(s) 192
SatI GCNGC 6 cut(s) 96, 123, 1735, 2149, 2152, 2945
Sau96I GGNCC 5 cut(s) 412, 669, 1553, 2248, 2741
ScaI AGTACT 1 cut(s) 480
SchI GAGTC 6 cut(s) 212, 475, 928, 1249, 1567, 2910
ScrFI CCNGG 2 cut(s) 2765, 2853
SduI GDGCHC 1 cut(s) 1075
SexAI ACCWGGT 1 cut(s) 2851
SfaNI GCATC 2 cut(s) 755, 1547
SfcI CTRYAG 4 cut(s) 1053, 1445, 1732, 2631
SfuI TTCGAA 2 cut(s) 143, 985
SinI GGWCC 2 cut(s) 412, 2248
SmiMI CAYNNNNRTG 3 cut(s) 303, 917, 1797
SmlI CTYRAG 5 cut(s) 619, 1085, 1237, 1495, 1753
SmoI CTYRAG 5 cut(s) 619, 1085, 1237, 1495, 1753
SsiI CCGC 3 cut(s) 96, 507, 1191
SspI AATATT 1 cut(s) 825
SspMI CTAG 7 cut(s) 65, 126, 230, 317, 1244, 1655, 2561
StyD4I CCNGG 2 cut(s) 2763, 2851
StyI CCWWGG 2 cut(s) 1155, 1699
TaaI ACNGT 7 cut(s) 207, 257, 500, 1349, 2081, 2232, 2516
TaiI ACGT 2 cut(s) 2044, 2943
TaqI TCGA 9 cut(s) 143, 483, 494, 594, 985, 1380, 1390, 1887, 2651
TatI WGTACW 1 cut(s) 478
TauI GCSGC 1 cut(s) 98
TscAI CASTG 5 cut(s) 124, 1815, 2803, 2812, 2954
TseFI GTSAC 2 cut(s) 1089, 2794
TseI GCWGC 5 cut(s) 122, 1734, 2148, 2151, 2944
Tsp45I GTSAC 2 cut(s) 1089, 2794
TspDTI ATGAA 8 cut(s) 324, 442, 552, 708, 779, 2224, 2703, 2833
TspGWI ACGGA 3 cut(s) 2099, 2405, 2667
TspRI CASTG 5 cut(s) 124, 1815, 2803, 2812, 2954
Vha464I CTTAAG 2 cut(s) 1085, 1495
VneI GTGCAC 1 cut(s) 1071
VpaK11BI GGWCC 2 cut(s) 412, 2248
XagI CCTNNNNNAGG 1 cut(s) 360
XapI RAATTY 5 cut(s) 1393, 1706, 1960, 2644, 2673
XceI RCATGY 2 cut(s) 185, 637
XmiI GTMKAC 1 cut(s) 2227
XspI CTAG 7 cut(s) 65, 126, 230, 317, 1244, 1655, 2561
ZrmI AGTACT 1 cut(s) 480
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.