MD01G1064600.v1.1

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr01
Physical Location & Seq
Forward (+)
16839859 .. 16843110
3252 bp
Loading structure...
UTR
Exon/CDS
Intron
MD01G1064600.v1.1.491

Sequence Viewer

Length: 2916 bp
ATGAATGAAGTTTACTCACTTCAACAGAAAGGACAGCAGGAGTATCCCGAATATTACTTTCGAGGTAAAATGATGAGTCCTAAACTAATTGAGTTGCAGCATTTGAAATATTTCGACCTTTCTTCCGTTAACTTCACTTGGACCCAGCTTCCAGATTTCATTGGTTCTCTTTCCAATTTAAGACACCTCGACCTCTGGACTGCTTCTTTTGGTGGTCGAATTCCAACTCAGATCGGAAACCTTACCCACTTGCAATATCTTGATCTCAGATCCAATCACTTTGCTAATTTAGAAAACCTGAATTCATGGCTGCCTCGTCTTTCTTCTTTAACATATTTGGACCTGAGTTTCAACAATCTCAGTAATGTTCCTAACTGGATGGAAGCAGTTAATAAGCTCCCTAAACTTACAAACTTGTCTCTGTCTTATTGCAGTCTTCCTTCTCCTCTAATTCATTCCAGTACTCTTTTTAACATAAATTCTTCTAAATCTCTTGCTCATGTTGATCTCAGTGACAACCAACTCACTTCTTCTTCCATATTTCTTTGGTTGTCCAAATACAATGCCAGCCTTGTTCATCTTGATCTCAGATACAATAACTTTGCTAATGTAGAAAATCTGAATTCATGGCTGCCTCATCTTTCTGCTTTAACATATTTGGACCTGAGTTGGAGCAATCTCAGTAATGTTCCTGACTGGATGGAAGCAGTTAATAAGCTCCCTAAACTTACAAACTTGACACTGTACAATTGCAGGCTTCCTTCTCCTCTAATTCATTCCAGTACTCTTTTTAACATAAATTCTTCTATATCTCTTGCTCATGTTGATCTCGGTTACAACCAACTCACTTCTTCCATATTTCTTTGGTTGTCCAAATACAATGCCAGCCTTGTTCATCTTGACCTCTCTTCTAACCAAATTGAAGGAGGGATTCCGCAATCTTTTTCCAAGTTATGTAATCTGCAAGAATTCAACCTTTACAACAACACTCTAAGTGGACAACTTTCTTCGTTGGTTCAAATATTATTGTCTGCATGCCCTGATCAAAACTCATTAGAGACTCTGGACCTCTCAAGGAATCATCTTTCTGGATCAATTCCCAATCTCACAAACTTTTCATCATTGAAAGAATTAGTTCTCTCTGACAATCAATTGAGTGGAACGGTACCTGAAAGCTTTGGGCATATGTCTACGCTCGAGAGTATCTACCTTGGTATGAATGGTTTGGAAGGTGTGGTTTCGGAAAGCCACTTCTACAATCTCTCTAGATTAAGGAATTTATATATGTCCTATACCTCACTATCTTTAAGCTTCAGTTCTAATTGGACTCCTCCTTTCCAATTGGATTCCATATATTTGAGGTCTTGCATGGTGGGTCCACATTTTCCAAAATGGCTTCAAACTCAAAAAAGTTATAAAGTACTTGATATTTCTAATGCAAGAATTTCTGATATCCTTCCAAATTGGTTTTGGAGCCCTCTGTCTCATCAGGATCGTGGATCTTTTTTTATAGATATTTCCAACAACCGAATTAAAGGAACAATTCCAAATTCAAGATTTGAGTTTCCCTCATCTTCCTTTAGTCAAGTGAATTTGAGTTGGAATCGATTGGAAAGTCCAGTCCCTTCATTCCTGTCCACATCAATATCTCTAGATCTCTCCAACAATAAGCTTTCAAGGTTAATTTCTTTCATTTGTCCAAAGACTTCGAACAAGGTTAGTCCTTTAGCCTTTCTTGATCTCTCAAGCAACAATTTGTATGAACAACTTCCTAATTGTTGGACACGCTTTGAAAATCTTGTCTTTCTTGATTTGAGTGATAATGCTCTTTTTGGGAAAATTCCTACCACAATGGGCTCTTTACCTTTTATTCAAACGCTGAAGTTAAACAAGAATGGGTTTGTGGGGGAATTGCCTTCATCTTTGAAGAACTTTACTAGACTCAGTGTTTTTGATATTGGAGAAAATAACTTATCAGGTTTGATACCTGAATGGTTAGGGGTTGGACTTCCAAATTTGGCTATTCTTATCCTCCGTTCTAATCACTTCTATGGAAGCATTCCACTACAATTGTGCAATATGAGAGACATTCAAATTCTAGATTTTTCGATGAATAACATCTCTGGAAATATACCTAAATGCATCAAGAATTTGACTAATTTGGCTAAAAAAGGAAGTTCAAGTATAGCTATCTATCATCTCTATAATACCTCAACTGGCAGCCAACGAAGTTATTTGGAGGAAGCATCCTTGATATGGAAAGGCAAAATGTCGAAATACAAAAGTACTTTAGGGCTTGTAAAGAGTATTCATCTGTCGAGTAACCGATTAACAGGGGAGATTCCTACAGAAATCACTGATCTTGTGGGGTTGGTTTCCTTAAACCTGTCAAGAAACAATTTAACAGGTCAAATAACTCCAATGATCGGGAAATTGGAGTCCTTACAGTCCCTTGATCTGTCAAGAAACCACATATATGGTGGAATACCAACAAGCCTTTTTCAAATATATGGTCTTGGTGATTTGGACTTGTCAAACAACAACCTGTCTGGAAAAATTCCAATGGGGACTCAGCTCCAAACCTATGATCCATCTGCTTTTGTTGGAAATCCTCTGCTTTGTGGAATTCCACTTCGACAGTTGTGCTCTCCTGAGGAAACAAGTCCAGAGGAGCAACCAATGTTTGGGGATCAAGTTAAAGAGAATGATGGGCTTATAACAACAGGATTTTACTTGAGTTTGGCGCTTGGTTTTGTTGTTGGATTTTGGGGAGTTTGTGGGAGTTTGATATTCATCAGGTCATGGAGATACACATACTACAAGTTCTTGAACTATGTGTACGATTGGCTTTATGTGAGGGTGGTGTTGATCAGGCGACGAAGAACGATTGATGGCTCGTGCATCTACCGTTGGTAA

Protein Analysis

972

Amino Acids

109.56

Weight (kDa)

7.85

Isoelectric Point (pI)

44.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 28 - 269 2.7e-16 Leucine-rich repeat region
LRR_8 PF13855 374 - 434 5e-09 Leucine rich repeat
LRR_8 PF13855 767 - 825 2e-07 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000028)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g45420 FvH4_4g14031 FvH4_5g20780 FvH4_6g28530 FvH4_7g14020 FvH4_7g14030 FvH4_7g14040 FvH4_7g14050 FvH4_7g14060 FvH4_7g14070 FvH4_7g14090 FvH4_7g14110 FvH4_7g14140 FvH4_7g14450
malus_domestica MD00G1189100.v1.1 MD01G1018600.v1.1 MD01G1053800.v1.1 MD01G1053900.v1.1 MD01G1054000.v1.1 MD01G1054100.v1.1 MD01G1056700.v1.1 MD01G1057000.v1.1 MD01G1057300.v1.1 MD01G1057400.v1.1 MD01G1061600.v1.1 MD01G1061800.v1.1 MD01G1061900.v1.1 MD01G1062000.v1.1 MD01G1062400.v1.1 MD01G1062500.v1.1 MD01G1063200.v1.1 MD01G1063300.v1.1 MD01G1063400.v1.1 MD01G1063700.v1.1 MD01G1063900.v1.1 MD01G1064200.v1.1 MD01G1064300.v1.1 MD01G1064400.v1.1 MD01G1064600.v1.1 MD01G1064700.v1.1 MD01G1181100.v1.1 MD01G1212300.v1.1 MD01G1212500.v1.1 MD01G1212600.v1.1 MD02G1271900.v1.1 MD07G1136500.v1.1 MD07G1139300.v1.1 MD07G1141200.v1.1 MD07G1144700.v1.1 MD08G1144200.v1.1 MD14G1186300.v1.1 MD14G1186500.v1.1 MD14G1186700.v1.1 MD14G1186800.v1.1 MD15G1351300.v1.1 MD15G1439500.v1.1
prunus_persica Prupe.1G067000_v2.0.a1 Prupe.2G077400_v2.0.a1 Prupe.2G077700_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078600_v2.0.a1 Prupe.2G078800_v2.0.a1 Prupe.2G099600_v2.0.a1 Prupe.2G099700_v2.0.a1 Prupe.2G155100_v2.0.a1 Prupe.2G155500_v2.0.a1 Prupe.2G155600_v2.0.a1 Prupe.2G155800_v2.0.a1 Prupe.2G155900_v2.0.a1 Prupe.2G156100_v2.0.a1 Prupe.2G166100_v2.0.a1 Prupe.2G166300_v2.0.a1 Prupe.2G167500_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G168400_v2.0.a1 Prupe.2G168700_v2.0.a1 Prupe.2G168800_v2.0.a1 Prupe.2G169000_v2.0.a1 Prupe.2G169100_v2.0.a1 Prupe.2G169200_v2.0.a1 Prupe.2G169500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G172300_v2.0.a1 Prupe.2G304800_v2.0.a1 Prupe.4G264800_v2.0.a1 Prupe.4G265000_v2.0.a1 Prupe.5G051900_v2.0.a1 Prupe.5G052000_v2.0.a1
pyrus_communis pycom01g08380 pycom01g08430 pycom01g08490 pycom01g08520 pycom01g08540 pycom01g08550 pycom01g08600 pycom01g08630 pycom01g08660 pycom01g08720 pycom01g09180 pycom01g09200 pycom01g09210 pycom01g09270 pycom01g09280 pycom01g09300 pycom01g09380 pycom01g19110 pycom01g22260 pycom01g22310 pycom01g22330 pycom01g22350 pycom01g22360 pycom02g23250 pycom07g13420 pycom07g13670 pycom07g13900 pycom07g13910 pycom07g13960 pycom07g13970 pycom07g25680 pycom11g22830
rosa_chinensis RchiOBHm_Chr0c22g0500431 RchiOBHm_Chr0c22g0500441 RchiOBHm_Chr0c22g0500561 RchiOBHm_Chr0c22g0500571 RchiOBHm_Chr0c22g0500611 RchiOBHm_Chr0c22g0500621 RchiOBHm_Chr0c22g0500631 RchiOBHm_Chr0c22g0500681 RchiOBHm_Chr1g0348221 RchiOBHm_Chr1g0348251 RchiOBHm_Chr1g0352861 RchiOBHm_Chr1g0352871 RchiOBHm_Chr1g0352891 RchiOBHm_Chr1g0352901 RchiOBHm_Chr1g0354671 RchiOBHm_Chr1g0354701 RchiOBHm_Chr1g0354711 RchiOBHm_Chr1g0354751 RchiOBHm_Chr1g0354761 RchiOBHm_Chr1g0354841 RchiOBHm_Chr1g0354851 RchiOBHm_Chr1g0354881 RchiOBHm_Chr1g0354971 RchiOBHm_Chr1g0354981 RchiOBHm_Chr1g0354991 RchiOBHm_Chr1g0355001 RchiOBHm_Chr1g0355011 RchiOBHm_Chr1g0355021 RchiOBHm_Chr1g0355861 RchiOBHm_Chr1g0379671 RchiOBHm_Chr1g0379681 RchiOBHm_Chr2g0096591 RchiOBHm_Chr2g0132821 RchiOBHm_Chr3g0454901 RchiOBHm_Chr3g0472711 RchiOBHm_Chr4g0400791 RchiOBHm_Chr5g0069481 RchiOBHm_Chr5g0069511 RchiOBHm_Chr5g0069551 RchiOBHm_Chr6g0254651 RchiOBHm_Chr6g0259721 RchiOBHm_Chr7g0205911 RchiOBHm_Chr7g0206401 RchiOBHm_Chr7g0206571 RchiOBHm_Chr7g0206581 RchiOBHm_Chr7g0206621 RchiOBHm_Chr7g0206631 RchiOBHm_Chr7g0206641 RchiOBHm_Chr7g0206681 RchiOBHm_Chr7g0206691 RchiOBHm_Chr7g0206751 RchiOBHm_Chr7g0206761 RchiOBHm_Chr7g0206851 RchiOBHm_Chr7g0206911 RchiOBHm_Chr7g0206921 RchiOBHm_Chr7g0207001 RchiOBHm_Chr7g0207011 RchiOBHm_Chr7g0207031 RchiOBHm_Chr7g0207101 RchiOBHm_Chr7g0207161 RchiOBHm_Chr7g0207201 RchiOBHm_Chr7g0207271 RchiOBHm_Chr7g0207301 RchiOBHm_Chr7g0207311 RchiOBHm_Chr7g0207421 RchiOBHm_Chr7g0207481 RchiOBHm_Chr7g0207491 RchiOBHm_Chr7g0207501 RchiOBHm_Chr7g0207521 RchiOBHm_Chr7g0207531 RchiOBHm_Chr7g0207561 RchiOBHm_Chr7g0207571 RchiOBHm_Chr7g0207581 RchiOBHm_Chr7g0207601 RchiOBHm_Chr7g0207621 RchiOBHm_Chr7g0207631 RchiOBHm_Chr7g0207651 RchiOBHm_Chr7g0207661 RchiOBHm_Chr7g0207711 RchiOBHm_Chr7g0207761 RchiOBHm_Chr7g0207801 RchiOBHm_Chr7g0208821 RchiOBHm_Chr7g0208831 RchiOBHm_Chr7g0208841 RchiOBHm_Chr7g0213601 RchiOBHm_Chr7g0215981 RchiOBHm_Chr7g0216021
rosa_laevigata RLG00000003193 RLG00000003194 RLG00000003287 RLG00000003288 RLG00000003289 RLG00000003293 RLG00000003294 RLG00000003295 RLG00000003297 RLG00000003299 RLG00000003301 RLG00000003327 RLG00000003347 RLG00000016653 RLG00000018642 RLG00000018643 RLG00000019285 RLG00000022542 RLG00000026368 RLG00000026371 RLG00000028124 RLG00000028125 RLG00000028183 RLG00000028184 RLG00000028185 RLG00000028188 RLG00000028673 RLG00000029267 RLG00000029325 RLG00000029674 RLG00000032883 RLG00000036055 RLG00000036058 RLG00000036065 RLG00000036068 RLG00000036071 RLG00000036072 RLG00000036075 RLG00000036076
rosa_multiflora Rmu_co8250183.1_g000001 Rmu_co8271981.1_g000001 Rmu_co8410829.1_g000001 Rmu_co8432879.1_g000001 Rmu_co8441941.1_g000001 Rmu_sc0000076.1_g000031 Rmu_sc0000738.1_g000038 Rmu_sc0000848.1_g000003 Rmu_sc0000848.1_g000014 Rmu_sc0000848.1_g000015 Rmu_sc0000848.1_g000016 Rmu_sc0001264.1_g000001 Rmu_sc0002284.1_g000018 Rmu_sc0002356.1_g000011 Rmu_sc0003020.1_g000003 Rmu_sc0003115.1_g000001 Rmu_sc0003115.1_g000002 Rmu_sc0003115.1_g000003 Rmu_sc0003115.1_g000004 Rmu_sc0003115.1_g000005 Rmu_sc0003115.1_g000008 Rmu_sc0003115.1_g000010 Rmu_sc0003115.1_g000011 Rmu_sc0003115.1_g000014 Rmu_sc0003565.1_g000002 Rmu_sc0003652.1_g000013 Rmu_sc0003652.1_g000015 Rmu_sc0003652.1_g000016 Rmu_sc0003652.1_g000019 Rmu_sc0003940.1_g000001 Rmu_sc0003940.1_g000004 Rmu_sc0003940.1_g000009 Rmu_sc0004084.1_g000010 Rmu_sc0004705.1_g000021 Rmu_sc0004972.1_g000007 Rmu_sc0004987.1_g000002 Rmu_sc0004987.1_g000006 Rmu_sc0005065.1_g000018 Rmu_sc0005065.1_g000029 Rmu_sc0005391.1_g000002 Rmu_sc0005633.1_g000003 Rmu_sc0005633.1_g000008 Rmu_sc0006632.1_g000014 Rmu_sc0006632.1_g000018 Rmu_sc0006681.1_g000010 Rmu_sc0006681.1_g000011 Rmu_sc0006733.1_g000003 Rmu_sc0007385.1_g000005 Rmu_sc0007385.1_g000007 Rmu_sc0007385.1_g000009 Rmu_sc0007385.1_g000016 Rmu_sc0007645.1_g000002 Rmu_sc0007645.1_g000003 Rmu_sc0007645.1_g000022 Rmu_sc0007828.1_g000008 Rmu_sc0008509.1_g000003 Rmu_sc0008509.1_g000015 Rmu_sc0008509.1_g000016 Rmu_sc0008509.1_g000020 Rmu_sc0008509.1_g000030 Rmu_sc0008509.1_g000041 Rmu_sc0008756.1_g000001 Rmu_sc0008756.1_g000003 Rmu_sc0013028.1_g000002 Rmu_sc0013028.1_g000003 Rmu_sc0013028.1_g000005 Rmu_sc0013160.1_g000001 Rmu_sc0014454.1_g000009 Rmu_sc0014455.1_g000007 Rmu_sc0014659.1_g000004 Rmu_sc0017798.1_g000002 Rmu_sc0017798.1_g000004 Rmu_sc0029608.1_g000001 Rmu_sc0037861.1_g000001 Rmu_sc0038750.1_g000001 Rmu_sc0042995.1_g000001 Rmu_ssc0000161.1_g000017
rosa_roxburghii Rroxscaffold_1G00009180 Rroxscaffold_1G00009190 Rroxscaffold_1G00011450 Rroxscaffold_1G00011480 Rroxscaffold_2G00111660 Rroxscaffold_2G00113570 Rroxscaffold_2G00122140 Rroxscaffold_3G00243730 Rroxscaffold_3G00245750 Rroxscaffold_3G00245760 Rroxscaffold_3G00250220 Rroxscaffold_3G00251160 Rroxscaffold_3G00251270 Rroxscaffold_3G00251280 Rroxscaffold_3G00251300 Rroxscaffold_3G00251340 Rroxscaffold_3G00251350 Rroxscaffold_3G00251390 Rroxscaffold_3G00251400 Rroxscaffold_3G00251560 Rroxscaffold_3G00251570 Rroxscaffold_3G00251870 Rroxscaffold_3G00252200 Rroxscaffold_3G00252210 Rroxscaffold_4G00279970 Rroxscaffold_4G00299970 Rroxscaffold_4G00300760 Rroxscaffold_4G00300780 Rroxscaffold_4G00300810 Rroxscaffold_4G00300850 Rroxscaffold_4G00307080 Rroxscaffold_4G00307100 Rroxscaffold_4G00313990 Rroxscaffold_6G00405080
rosa_rugosa Rorug01G0193600 Rorug01G0193700 Rorug01G0243800 Rorug01G0244000 Rorug01G0244000 Rorug01G0244400 Rorug01G0414300.1 Rorug01G0414500 Rorug01G0414600 Rorug02G0235600 Rorug02G0307900 Rorug02G0583100 Rorug02G0583200 Rorug02G0583300 Rorug05G0398000 Rorug05G0398100 Rorug05G0398200 Rorug05G0580300 Rorug05G0590300 Rorug06G0116000 Rorug06G0116100 Rorug07G0096800 Rorug07G0097100.1 Rorug07G0097200 Rorug07G0098600 Rorug07G0098600 Rorug07G0098700 Rorug07G0099100 Rorug07G0106100 Rorug07G0106200 Rorug07G0106200 Rorug07G0106300 Rorug07G0157600 Rorug07G0157700 Rorug07G0157700 Rorug07G0157800
rosa_samantha Rh1AG255500 Rh1AG256700 Rh1BG225800 Rh1BG226200 Rh1BG230000 Rh1CG195300 Rh1CG238400 Rh1CG238500 Rh1CG238900 Rh1CG239000 Rh1CG239300 Rh1CG239400 Rh1CG239800 Rh1CG240000 Rh1CG240200 Rh1CG240300 Rh1CG244300 Rh1CG406900 Rh1CG407300 Rh1CG407400 Rh2CG343600 Rh2DG383200 Rh3BG205900 Rh4AG404400 Rh4BG415500 Rh5AG455200 Rh5AG455600 Rh5CG497000 Rh5CG497200 Rh7AG228800 Rh7AG230400 Rh7AG230800 Rh7AG231200 Rh7AG231600 Rh7AG231800 Rh7AG232100 Rh7AG241600 Rh7BG236200 Rh7CG238200 Rh7CG239100 Rh7CG243400 Rh7CG244900
rosa_wichuraiana Rw0G023040 Rw1G017780 Rw1G022320 Rw1G022340 Rw1G022410 Rw1G022420 Rw1G022440 Rw1G022460 Rw1G022490 Rw1G022500 Rw1G022530 Rw1G022550 Rw1G022560 Rw1G022600 Rw1G023060 Rw1G038150 Rw1G038160 Rw2G008210 Rw2G022350 Rw2G029290 Rw4G015050 Rw4G019850 Rw5G024060 Rw5G042460 Rw7G019160 Rw7G019460 Rw7G019690 Rw7G019830 Rw7G019860 Rw7G019880 Rw7G019890 Rw7G019930 Rw7G019990 Rw7G020460 Rw7G025100 Rw7G025120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1416, 2717
Acc65I GGTACC 1 cut(s) 1165
AccB1I GGYRCC 1 cut(s) 1165
AccB7I CCANNNNNTGG 1 cut(s) 2684
AccI GTMKAC 1 cut(s) 1190
AciI CCGC 1 cut(s) 935
AclWI GGATC 6 cut(s) 264, 1099, 1500, 1507, 2582, 2697
AcuI CTGAAG 2 cut(s) 1297, 1901
AfaI GTAC 7 cut(s) 463, 746, 784, 1167, 1422, 2287, 2840
AfiI CCNNNNNNNGG 3 cut(s) 2256, 2426, 2684
AluBI AGCT 8 cut(s) 148, 397, 718, 1176, 1311, 1672, 2189, 2575
AluI AGCT 8 cut(s) 148, 397, 718, 1176, 1311, 1672, 2189, 2575
Alw21I GWGCWC 1 cut(s) 2648
Alw26I GTCTC 4 cut(s) 423, 1052, 1488, 2079
AlwI GGATC 6 cut(s) 264, 1099, 1500, 1507, 2582, 2697
Ama87I CYCGRG 1 cut(s) 1196
ApeKI GCWGC 4 cut(s) 97, 310, 631, 2220
ArsI GACNNNNNNTTYG 2 cut(s) 2497, 2529
Asp700I GAANNNNTTC 3 cut(s) 110, 1134, 1767
Asp718I GGTACC 1 cut(s) 1165
AspLEI GCGC 1 cut(s) 2746
AspS9I GGNCC 5 cut(s) 141, 340, 661, 1066, 1376
AsuHPI GGTGA 1 cut(s) 2531
AsuII TTCGAA 1 cut(s) 1709
AvaI CYCGRG 1 cut(s) 1196
AvaII GGWCC 5 cut(s) 141, 340, 661, 1066, 1376
AxyI CCTNAGG 1 cut(s) 2652
BanI GGYRCC 1 cut(s) 1165
BanII GRGCYC 2 cut(s) 1478, 1859
BauI CACGAG 1 cut(s) 2896
BbsI GAAGAC 1 cut(s) 428
Bbv12I GWGCWC 1 cut(s) 2648
BbvI GCAGC 4 cut(s) 109, 297, 618, 2232
BccI CCATC 5 cut(s) 373, 694, 2599, 2702, 2885
BcgI CGANNNNNNTGC 2 cut(s) 2625, 2659
BciVI GTATCC 1 cut(s) 54
BclI TGATCA 2 cut(s) 1042, 2868
BcoDI GTCTC 4 cut(s) 423, 1052, 1488, 2079
BfaI CTAG 4 cut(s) 1266, 1652, 1938, 2099
BfmI CTRYAG 1 cut(s) 2346
BfoI RGCGCY 1 cut(s) 2747
BfuI GTATCC 1 cut(s) 54
BglII AGATCT 1 cut(s) 1654
BisI GCNGC 4 cut(s) 98, 311, 632, 2221
BlsI GCNGC 4 cut(s) 99, 312, 633, 2222
BmcAI AGTACT 4 cut(s) 463, 784, 1422, 2287
Bme18I GGWCC 5 cut(s) 141, 340, 661, 1066, 1376
BmeT110I CYCGRG 1 cut(s) 1196
BmgT120I GGNCC 5 cut(s) 141, 340, 661, 1066, 1376
BmiI GGNNCC 4 cut(s) 143, 1167, 1377, 1475
BmsI GCATC 3 cut(s) 2151, 2255, 2910
BpiI GAAGAC 1 cut(s) 428
BplI GAGNNNNNCTC 2 cut(s) 1553, 1585
Bpu14I TTCGAA 1 cut(s) 1709
BpuEI CTTGAG 3 cut(s) 1057, 1729, 2755
Bsa29I ATCGAT 1 cut(s) 1606
BsaBI GATNNNNATC 1 cut(s) 2792
BsaJI CCNNGG 1 cut(s) 1210
Bsc4I CCNNNNNNNGG 3 cut(s) 2256, 2426, 2684
Bse1I ACTGG 6 cut(s) 380, 459, 701, 780, 1619, 2221
Bse21I CCTNAGG 1 cut(s) 2652
Bse8I GATNNNNATC 1 cut(s) 2792
BseCI ATCGAT 1 cut(s) 1606
BseDI CCNNGG 1 cut(s) 1210
BseGI GGATG 3 cut(s) 384, 705, 2246
BseJI GATNNNNATC 1 cut(s) 2792
BseLI CCNNNNNNNGG 3 cut(s) 2256, 2426, 2684
BseNI ACTGG 6 cut(s) 380, 459, 701, 780, 1619, 2221
BseRI GAGGAG 4 cut(s) 435, 756, 1320, 2684
BseXI GCAGC 4 cut(s) 109, 297, 618, 2232
BseYI CCCAGC 1 cut(s) 144
BshNI GGYRCC 1 cut(s) 1165
BshVI ATCGAT 1 cut(s) 1606
BsiHKAI GWGCWC 1 cut(s) 2648
BsiHKCI CYCGRG 1 cut(s) 1196
BslFI GGGAC 3 cut(s) 1607, 2434, 2581
BslI CCNNNNNNNGG 3 cut(s) 2256, 2426, 2684
BsmAI GTCTC 4 cut(s) 423, 1052, 1488, 2079
BsmFI GGGAC 3 cut(s) 1607, 2434, 2581
BsmI GAATGC 1 cut(s) 2058
BsoBI CYCGRG 1 cut(s) 1196
Bsp119I TTCGAA 1 cut(s) 1709
Bsp1286I GDGCHC 3 cut(s) 1478, 1859, 2648
Bsp1407I TGTACA 1 cut(s) 744
BspACI CCGC 1 cut(s) 935
BspDI ATCGAT 1 cut(s) 1606
BspLI GGNNCC 4 cut(s) 143, 1167, 1377, 1475
BspPI GGATC 6 cut(s) 264, 1099, 1500, 1507, 2582, 2697
BspT104I TTCGAA 1 cut(s) 1709
BspT107I GGYRCC 1 cut(s) 1165
BsrGI TGTACA 1 cut(s) 744
BsrI ACTGG 6 cut(s) 380, 459, 701, 780, 1619, 2221
BssECI CCNNGG 1 cut(s) 1210
BssSI CACGAG 1 cut(s) 2896
BssT1I CCWWGG 1 cut(s) 1210
Bst2BI CACGAG 1 cut(s) 2896
Bst4CI ACNGT 5 cut(s) 744, 1165, 2448, 2640, 2909
Bst6I CTCTTC 1 cut(s) 913
BstAUI TGTACA 1 cut(s) 744
BstBI TTCGAA 1 cut(s) 1709
BstC8I GCNNGC 4 cut(s) 568, 755, 886, 1036
BstF5I GGATG 3 cut(s) 384, 705, 2246
BstH2I RGCGCY 1 cut(s) 2747
BstHHI GCGC 1 cut(s) 2746
BstMAI GTCTC 4 cut(s) 423, 1052, 1488, 2079
BstNSI RCATGY 1 cut(s) 1038
BstSFI CTRYAG 1 cut(s) 2346
BstV1I GCAGC 4 cut(s) 109, 297, 618, 2232
BstV2I GAAGAC 1 cut(s) 428
BstX2I RGATCY 3 cut(s) 269, 1499, 1654
BstXI CCANNNNNNTGG 1 cut(s) 2477
BstYI RGATCY 3 cut(s) 269, 1499, 1654
Bsu15I ATCGAT 1 cut(s) 1606
Bsu36I CCTNAGG 1 cut(s) 2652
BsuI GTATCC 1 cut(s) 54
BsuTUI ATCGAT 1 cut(s) 1606
BtsCI GGATG 3 cut(s) 384, 705, 2246
BtsIMutI CAGTG 4 cut(s) 517, 740, 1951, 2355
Cac8I GCNNGC 4 cut(s) 568, 755, 886, 1036
CfoI GCGC 1 cut(s) 2746
Cfr13I GGNCC 5 cut(s) 141, 340, 661, 1066, 1376
ClaI ATCGAT 1 cut(s) 1606
Csp6I GTAC 7 cut(s) 462, 745, 783, 1166, 1421, 2286, 2839
CspCI CAANNNNNGTGG 2 cut(s) 2052, 2087
CviAII CATG 7 cut(s) 306, 500, 627, 821, 1035, 1369, 2802
CviQI GTAC 7 cut(s) 462, 745, 783, 1166, 1421, 2286, 2839
Eam1104I CTCTTC 1 cut(s) 913
EarI CTCTTC 1 cut(s) 913
Eco130I CCWWGG 1 cut(s) 1210
Eco24I GRGCYC 2 cut(s) 1478, 1859
Eco32I GATATC 1 cut(s) 1453
Eco47I GGWCC 5 cut(s) 141, 340, 661, 1066, 1376
Eco57I CTGAAG 2 cut(s) 1297, 1901
Eco81I CCTNAGG 1 cut(s) 2652
Eco88I CYCGRG 1 cut(s) 1196
EcoRI GAATTC 5 cut(s) 219, 301, 622, 968, 2625
EcoRV GATATC 1 cut(s) 1453
EcoT14I CCWWGG 1 cut(s) 1210
EcoT22I ATGCAT 1 cut(s) 2144
EcoT38I GRGCYC 2 cut(s) 1478, 1859
ErhI CCWWGG 1 cut(s) 1210
FaeI CATG 7 cut(s) 309, 503, 630, 824, 1038, 1372, 2805
FaqI GGGAC 3 cut(s) 1607, 2434, 2581
FatI CATG 7 cut(s) 305, 499, 626, 820, 1034, 1368, 2801
FauNDI CATATG 1 cut(s) 1185
FbaI TGATCA 2 cut(s) 1042, 2868
FblI GTMKAC 1 cut(s) 1190
Fnu4HI GCNGC 4 cut(s) 98, 311, 632, 2221
FokI GGATG 3 cut(s) 391, 712, 2233
FriOI GRGCYC 2 cut(s) 1478, 1859
Fsp4HI GCNGC 4 cut(s) 98, 311, 632, 2221
FspBI CTAG 4 cut(s) 1266, 1652, 1938, 2099
GlaI GCGC 1 cut(s) 2745
GluI GCNGC 4 cut(s) 98, 311, 632, 2221
GsaI CCCAGC 1 cut(s) 148
HaeII RGCGCY 1 cut(s) 2747
HhaI GCGC 1 cut(s) 2746
Hin1II CATG 7 cut(s) 309, 503, 630, 824, 1038, 1372, 2805
Hin6I GCGC 1 cut(s) 2744
HinP1I GCGC 1 cut(s) 2744
HincII GTYRAC 1 cut(s) 130
HindII GTYRAC 1 cut(s) 130
HindIII AAGCTT 3 cut(s) 1174, 1309, 1670
HpaI GTTAAC 1 cut(s) 130
HphI GGTGA 1 cut(s) 2531
Hpy166II GTNNAC 7 cut(s) 13, 130, 998, 1191, 1379, 1638, 2839
Hpy188I TCNGA 8 cut(s) 231, 236, 269, 590, 621, 1144, 1243, 1450
Hpy8I GTNNAC 7 cut(s) 13, 130, 998, 1191, 1379, 1638, 2839
Hpy99I CGWCG 1 cut(s) 2880
HpyAV CCTTC 7 cut(s) 450, 771, 917, 1223, 1466, 1635, 1926
HpyCH4III ACNGT 5 cut(s) 744, 1165, 2448, 2640, 2909
Hsp92II CATG 7 cut(s) 309, 503, 630, 824, 1038, 1372, 2805
HspAI GCGC 1 cut(s) 2744
KpnI GGTACC 1 cut(s) 1169
Ksp22I TGATCA 2 cut(s) 1042, 2868
KspAI GTTAAC 1 cut(s) 130
LmnI GCTCC 6 cut(s) 402, 672, 723, 1473, 2580, 2671
Lsp1109I GCAGC 4 cut(s) 109, 297, 618, 2232
LweI GCATC 3 cut(s) 2151, 2255, 2910
MaeI CTAG 4 cut(s) 1266, 1652, 1938, 2099
MaeIII GTNAC 3 cut(s) 512, 833, 2321
MfeI CAATTG 4 cut(s) 748, 1151, 1340, 2069
MflI RGATCY 3 cut(s) 269, 1499, 1654
MhlI GDGCHC 3 cut(s) 1478, 1859, 2648
MlyI GAGTC 6 cut(s) 85, 1054, 1321, 1935, 2447, 2563
MmeI TCCRAC 9 cut(s) 248, 650, 1545, 1580, 1686, 1760, 1984, 2584, 2740
Mph1103I ATGCAT 1 cut(s) 2144
MroXI GAANNNNTTC 3 cut(s) 110, 1134, 1767
MslI CAYNNNNRTG 2 cut(s) 2049, 2475
MunI CAATTG 4 cut(s) 748, 1151, 1340, 2069
Mva1269I GAATGC 1 cut(s) 2058
NdeI CATATG 1 cut(s) 1185
NlaIII CATG 7 cut(s) 309, 503, 630, 824, 1038, 1372, 2805
NlaIV GGNNCC 4 cut(s) 143, 1167, 1377, 1475
NmuCI GTSAC 1 cut(s) 512
NsiI ATGCAT 1 cut(s) 2144
NspI RCATGY 1 cut(s) 1038
NspV TTCGAA 1 cut(s) 1709
PaeI GCATGC 1 cut(s) 1038
PaeR7I CTCGAG 1 cut(s) 1196
PctI GAATGC 1 cut(s) 2058
PdmI GAANNNNTTC 3 cut(s) 110, 1134, 1767
PfeI GAWTC 5 cut(s) 931, 1078, 1346, 1603, 2341
PflMI CCANNNNNTGG 1 cut(s) 2684
PkrI GCNGC 4 cut(s) 99, 312, 633, 2222
PleI GAGTC 6 cut(s) 84, 1054, 1321, 1935, 2446, 2563
PpsI GAGTC 6 cut(s) 84, 1054, 1321, 1935, 2446, 2563
PsiI TTATAA 2 cut(s) 1416, 2717
PspFI CCCAGC 1 cut(s) 144
PspN4I GGNNCC 4 cut(s) 143, 1167, 1377, 1475
PspPI GGNCC 5 cut(s) 141, 340, 661, 1066, 1376
PsrI GAACNNNNNNTAC 2 cut(s) 2822, 2854
PsuI RGATCY 3 cut(s) 269, 1499, 1654
RsaI GTAC 7 cut(s) 463, 746, 784, 1167, 1422, 2287, 2840
RsaNI GTAC 7 cut(s) 462, 745, 783, 1166, 1421, 2286, 2839
RseI CAYNNNNRTG 2 cut(s) 2049, 2475
SatI GCNGC 4 cut(s) 98, 311, 632, 2221
Sau96I GGNCC 5 cut(s) 141, 340, 661, 1066, 1376
ScaI AGTACT 4 cut(s) 463, 784, 1422, 2287
SchI GAGTC 6 cut(s) 85, 1054, 1321, 1935, 2447, 2563
SduI GDGCHC 3 cut(s) 1478, 1859, 2648
SfaNI GCATC 3 cut(s) 2151, 2255, 2910
SfcI CTRYAG 1 cut(s) 2346
Sfr274I CTCGAG 1 cut(s) 1196
SfuI TTCGAA 1 cut(s) 1709
SinI GGWCC 5 cut(s) 141, 340, 661, 1066, 1376
SlaI CTCGAG 1 cut(s) 1196
SmiMI CAYNNNNRTG 2 cut(s) 2049, 2475
SmlI CTYRAG 4 cut(s) 1072, 1196, 1744, 2734
SmoI CTYRAG 4 cut(s) 1072, 1196, 1744, 2734
SphI GCATGC 1 cut(s) 1038
SsiI CCGC 1 cut(s) 935
SspI AATATT 3 cut(s) 53, 110, 1023
SspMI CTAG 4 cut(s) 1266, 1652, 1938, 2099
StyI CCWWGG 1 cut(s) 1210
TaaI ACNGT 5 cut(s) 744, 1165, 2448, 2640, 2909
TatI WGTACW 5 cut(s) 461, 744, 782, 1420, 2285
TfiI GAWTC 5 cut(s) 931, 1078, 1346, 1603, 2341
TscAI CASTG 4 cut(s) 517, 747, 1951, 2362
TseFI GTSAC 1 cut(s) 512
TseI GCWGC 4 cut(s) 97, 310, 631, 2220
Tsp45I GTSAC 1 cut(s) 512
TspGWI ACGGA 2 cut(s) 115, 2024
TspRI CASTG 4 cut(s) 517, 747, 1951, 2362
Van91I CCANNNNNTGG 1 cut(s) 2684
VpaK11BI GGWCC 5 cut(s) 141, 340, 661, 1066, 1376
XbaI TCTAGA 3 cut(s) 1265, 1651, 2098
XceI RCATGY 1 cut(s) 1038
XcmI CCANNNNNNNNNTGG 2 cut(s) 1467, 2477
XhoI CTCGAG 1 cut(s) 1196
XmiI GTMKAC 1 cut(s) 1190
XmnI GAANNNNTTC 3 cut(s) 110, 1134, 1767
XspI CTAG 4 cut(s) 1266, 1652, 1938, 2099
ZrmI AGTACT 4 cut(s) 463, 784, 1422, 2287
Zsp2I ATGCAT 1 cut(s) 2144
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.