RLG00000003299

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
Physical Location & Seq
Forward (+)
46874130 .. 46876731
2602 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000003299

Sequence Viewer

Length: 1809 bp
ATGACACGGCTGAATTTGTCTGAGGCTGTGAATTGGCCAGAATCTTTGAGCAACCTCACTTTACTGACAGAGCTTCAGTTATCTTACTGTCTCCTTCCTGATGTCAATCTAAGATCACTTTCCTTTATTAATTCTTCCACCTCTCTTCAACTCCTTGACCTCTCTTCTAACTTTCTTATTTCTTCAATATTTTATTGGATAGCCAATGTCAGCAGCAACTTTGAACATATTCATCTCTCCTCCAACAATCTTGAAGGTCCCATCCCAGATGTCTTCACAAGCATGCTTTCTCTAGTAACACTAGATCTCTCTTCCAACGATCTCGAAGGTGGGATACCGAAAGGCCTTCAAAACTCATGCAGCTTAGCGTCGTTGACCTTATCGTCAAACCAATTGTCTGAAAACATTGAGGACTCTGTTAAAAACTTGTCTTGTGCTGAGAACACACTTGAGACCTTAGACTTGAGTGATAACCTGTTTTGGGGGTCATGGCCAGATTTGAAACGTTTCTCAAAGTTAAGAAAGTTATATCTTAGCTGGAATCAACTAAATGGGTCTATACCCGAGAGTGTCGGGCAACTCTCTAGCCTTGAAACATTAGATCTCTCCTGGAATTCTTTGAGTGGTGTCATAACAGAAGCCCACTTTTTGAACCTCTCTCGTTTACAAACTTTAGATCTTAGCTGGAATCAAGTAAATGGGTCTCTACCCGAGCGTGTCGGGCAACTCTCTAGCCTTGAAACATTAGATCTCTCCGGGAATTCTTTGAGTGGTGTCATAACAGAAGCCCACTTTTTGAACCTCTCTCGTTTACAATCTCTGGACGTTTCTAATAACCATTTCTCTATCAACCTTAGCTCTGATTGGAATCCACCATTTCAGCTTCATTGGTTAGATATGTCCTCTTGCAAGGTGGGCCCAGCTTTTCCCAAGTGGATTCTAACGCAGACAAATCTACCCGGTCTTTTTCTCTCTAATGCTGGACTATCAGGATCATTACCTAATAAGTTTTGGGATCTATTTTTTGGCTTAGATAGCTTAGATCTCTCTATGAACCAAATCCATGGGAAACTGCCGAATCTGTCATCGACAAGCTTGCGTTCAGTTAACTTGTCTTCTAATCTACTTTCTGGTGCAGTGCCATCATTTTCTCATATGCTTTTGAAGTTGTATCTCTCGAATAACATGTTTTCTGAGTTGTCTTCCTTCTGTGCAACGCAGTCTACATCTTTATGCCAAAGCGCTAATGATGAAATCAATCCGGAAATTAATTTAGAACTCGTGTGGAAGGGAATAGAGATCGAGTTTGGGGAAAATCTTGTTGGTATGAGAAGCATTGACATGTCAAGCAACTGTTTGATGGGGGAAATTCCGCAAAGTATAGCAAATATGACAGAGTTGAAATCACTGAATCTGTCAAGAAACTATTTGACAAGAAAGCTTCCCGAAAACTTTGGTAACATGAAGATGTTGGAATCTCTTGATTTGTCAAGAAACCAGATATCTGGTAAAATTCCTACAAGTTTTGTTAGCTTACAGTTTCTTAGTTTCTTGGACTTATCATACAACAACTTGTCAGGAAGAATTCCACTTGGAACTCAACTTCAAAGTTTTAATGCTTCTCAATATACGGGAAATCTTGGACTTTGTGGACCACCGCTGACACCAAATTGCTCACGAGATGGAGAAACTCAAGCTGATGATAACAAAGAACATGATAATGATGGAGATTCTGGCATTCGGGGAAATGAGCCTAATGATCCCGGAAGTGGAAAGATTCAAGGCTTAATGTTGAAGGTTTTCAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

603

Amino Acids

66.34

Weight (kDa)

4.69

Isoelectric Point (pI)

39.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_8 PF13855 75 - 132 1e-06 Leucine rich repeat
LRR_8 PF13855 149 - 207 3.8e-06 Leucine rich repeat
LRR_14 PF23598 166 - 252 4.3e-08 Leucine-rich repeat region
LRR_8 PF13855 172 - 231 4.1e-08 Leucine rich repeat
LRR_8 PF13855 211 - 256 7.6e-06 Leucine rich repeat
LRR_8 PF13855 242 - 281 8e-06 Leucine rich repeat
LRR_14 PF23598 459 - 522 1.3e-07 Leucine-rich repeat region
LRR_8 PF13855 466 - 525 9.7e-11 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000028)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g45420 FvH4_4g14031 FvH4_5g20780 FvH4_6g28530 FvH4_7g14020 FvH4_7g14030 FvH4_7g14040 FvH4_7g14050 FvH4_7g14060 FvH4_7g14070 FvH4_7g14090 FvH4_7g14110 FvH4_7g14140 FvH4_7g14450
malus_domestica MD00G1189100.v1.1 MD01G1018600.v1.1 MD01G1053800.v1.1 MD01G1053900.v1.1 MD01G1054000.v1.1 MD01G1054100.v1.1 MD01G1056700.v1.1 MD01G1057000.v1.1 MD01G1057300.v1.1 MD01G1057400.v1.1 MD01G1061600.v1.1 MD01G1061800.v1.1 MD01G1061900.v1.1 MD01G1062000.v1.1 MD01G1062400.v1.1 MD01G1062500.v1.1 MD01G1063200.v1.1 MD01G1063300.v1.1 MD01G1063400.v1.1 MD01G1063700.v1.1 MD01G1063900.v1.1 MD01G1064200.v1.1 MD01G1064300.v1.1 MD01G1064400.v1.1 MD01G1064600.v1.1 MD01G1064700.v1.1 MD01G1181100.v1.1 MD01G1212300.v1.1 MD01G1212500.v1.1 MD01G1212600.v1.1 MD02G1271900.v1.1 MD07G1136500.v1.1 MD07G1139300.v1.1 MD07G1141200.v1.1 MD07G1144700.v1.1 MD08G1144200.v1.1 MD14G1186300.v1.1 MD14G1186500.v1.1 MD14G1186700.v1.1 MD14G1186800.v1.1 MD15G1351300.v1.1 MD15G1439500.v1.1
prunus_persica Prupe.1G067000_v2.0.a1 Prupe.2G077400_v2.0.a1 Prupe.2G077700_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078600_v2.0.a1 Prupe.2G078800_v2.0.a1 Prupe.2G099600_v2.0.a1 Prupe.2G099700_v2.0.a1 Prupe.2G155100_v2.0.a1 Prupe.2G155500_v2.0.a1 Prupe.2G155600_v2.0.a1 Prupe.2G155800_v2.0.a1 Prupe.2G155900_v2.0.a1 Prupe.2G156100_v2.0.a1 Prupe.2G166100_v2.0.a1 Prupe.2G166300_v2.0.a1 Prupe.2G167500_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G168400_v2.0.a1 Prupe.2G168700_v2.0.a1 Prupe.2G168800_v2.0.a1 Prupe.2G169000_v2.0.a1 Prupe.2G169100_v2.0.a1 Prupe.2G169200_v2.0.a1 Prupe.2G169500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G172300_v2.0.a1 Prupe.2G304800_v2.0.a1 Prupe.4G264800_v2.0.a1 Prupe.4G265000_v2.0.a1 Prupe.5G051900_v2.0.a1 Prupe.5G052000_v2.0.a1
pyrus_communis pycom01g08380 pycom01g08430 pycom01g08490 pycom01g08520 pycom01g08540 pycom01g08550 pycom01g08600 pycom01g08630 pycom01g08660 pycom01g08720 pycom01g09180 pycom01g09200 pycom01g09210 pycom01g09270 pycom01g09280 pycom01g09300 pycom01g09380 pycom01g19110 pycom01g22260 pycom01g22310 pycom01g22330 pycom01g22350 pycom01g22360 pycom02g23250 pycom07g13420 pycom07g13670 pycom07g13900 pycom07g13910 pycom07g13960 pycom07g13970 pycom07g25680 pycom11g22830
rosa_chinensis RchiOBHm_Chr0c22g0500431 RchiOBHm_Chr0c22g0500441 RchiOBHm_Chr0c22g0500561 RchiOBHm_Chr0c22g0500571 RchiOBHm_Chr0c22g0500611 RchiOBHm_Chr0c22g0500621 RchiOBHm_Chr0c22g0500631 RchiOBHm_Chr0c22g0500681 RchiOBHm_Chr1g0348221 RchiOBHm_Chr1g0348251 RchiOBHm_Chr1g0352861 RchiOBHm_Chr1g0352871 RchiOBHm_Chr1g0352891 RchiOBHm_Chr1g0352901 RchiOBHm_Chr1g0354671 RchiOBHm_Chr1g0354701 RchiOBHm_Chr1g0354711 RchiOBHm_Chr1g0354751 RchiOBHm_Chr1g0354761 RchiOBHm_Chr1g0354841 RchiOBHm_Chr1g0354851 RchiOBHm_Chr1g0354881 RchiOBHm_Chr1g0354971 RchiOBHm_Chr1g0354981 RchiOBHm_Chr1g0354991 RchiOBHm_Chr1g0355001 RchiOBHm_Chr1g0355011 RchiOBHm_Chr1g0355021 RchiOBHm_Chr1g0355861 RchiOBHm_Chr1g0379671 RchiOBHm_Chr1g0379681 RchiOBHm_Chr2g0096591 RchiOBHm_Chr2g0132821 RchiOBHm_Chr3g0454901 RchiOBHm_Chr3g0472711 RchiOBHm_Chr4g0400791 RchiOBHm_Chr5g0069481 RchiOBHm_Chr5g0069511 RchiOBHm_Chr5g0069551 RchiOBHm_Chr6g0254651 RchiOBHm_Chr6g0259721 RchiOBHm_Chr7g0205911 RchiOBHm_Chr7g0206401 RchiOBHm_Chr7g0206571 RchiOBHm_Chr7g0206581 RchiOBHm_Chr7g0206621 RchiOBHm_Chr7g0206631 RchiOBHm_Chr7g0206641 RchiOBHm_Chr7g0206681 RchiOBHm_Chr7g0206691 RchiOBHm_Chr7g0206751 RchiOBHm_Chr7g0206761 RchiOBHm_Chr7g0206851 RchiOBHm_Chr7g0206911 RchiOBHm_Chr7g0206921 RchiOBHm_Chr7g0207001 RchiOBHm_Chr7g0207011 RchiOBHm_Chr7g0207031 RchiOBHm_Chr7g0207101 RchiOBHm_Chr7g0207161 RchiOBHm_Chr7g0207201 RchiOBHm_Chr7g0207271 RchiOBHm_Chr7g0207301 RchiOBHm_Chr7g0207311 RchiOBHm_Chr7g0207421 RchiOBHm_Chr7g0207481 RchiOBHm_Chr7g0207491 RchiOBHm_Chr7g0207501 RchiOBHm_Chr7g0207521 RchiOBHm_Chr7g0207531 RchiOBHm_Chr7g0207561 RchiOBHm_Chr7g0207571 RchiOBHm_Chr7g0207581 RchiOBHm_Chr7g0207601 RchiOBHm_Chr7g0207621 RchiOBHm_Chr7g0207631 RchiOBHm_Chr7g0207651 RchiOBHm_Chr7g0207661 RchiOBHm_Chr7g0207711 RchiOBHm_Chr7g0207761 RchiOBHm_Chr7g0207801 RchiOBHm_Chr7g0208821 RchiOBHm_Chr7g0208831 RchiOBHm_Chr7g0208841 RchiOBHm_Chr7g0213601 RchiOBHm_Chr7g0215981 RchiOBHm_Chr7g0216021
rosa_laevigata RLG00000003193 RLG00000003194 RLG00000003287 RLG00000003288 RLG00000003289 RLG00000003293 RLG00000003294 RLG00000003295 RLG00000003297 RLG00000003299 RLG00000003301 RLG00000003327 RLG00000003347 RLG00000016653 RLG00000018642 RLG00000018643 RLG00000019285 RLG00000022542 RLG00000026368 RLG00000026371 RLG00000028124 RLG00000028125 RLG00000028183 RLG00000028184 RLG00000028185 RLG00000028188 RLG00000028673 RLG00000029267 RLG00000029325 RLG00000029674 RLG00000032883 RLG00000036055 RLG00000036058 RLG00000036065 RLG00000036068 RLG00000036071 RLG00000036072 RLG00000036075 RLG00000036076
rosa_multiflora Rmu_co8250183.1_g000001 Rmu_co8271981.1_g000001 Rmu_co8410829.1_g000001 Rmu_co8432879.1_g000001 Rmu_co8441941.1_g000001 Rmu_sc0000076.1_g000031 Rmu_sc0000738.1_g000038 Rmu_sc0000848.1_g000003 Rmu_sc0000848.1_g000014 Rmu_sc0000848.1_g000015 Rmu_sc0000848.1_g000016 Rmu_sc0001264.1_g000001 Rmu_sc0002284.1_g000018 Rmu_sc0002356.1_g000011 Rmu_sc0003020.1_g000003 Rmu_sc0003115.1_g000001 Rmu_sc0003115.1_g000002 Rmu_sc0003115.1_g000003 Rmu_sc0003115.1_g000004 Rmu_sc0003115.1_g000005 Rmu_sc0003115.1_g000008 Rmu_sc0003115.1_g000010 Rmu_sc0003115.1_g000011 Rmu_sc0003115.1_g000014 Rmu_sc0003565.1_g000002 Rmu_sc0003652.1_g000013 Rmu_sc0003652.1_g000015 Rmu_sc0003652.1_g000016 Rmu_sc0003652.1_g000019 Rmu_sc0003940.1_g000001 Rmu_sc0003940.1_g000004 Rmu_sc0003940.1_g000009 Rmu_sc0004084.1_g000010 Rmu_sc0004705.1_g000021 Rmu_sc0004972.1_g000007 Rmu_sc0004987.1_g000002 Rmu_sc0004987.1_g000006 Rmu_sc0005065.1_g000018 Rmu_sc0005065.1_g000029 Rmu_sc0005391.1_g000002 Rmu_sc0005633.1_g000003 Rmu_sc0005633.1_g000008 Rmu_sc0006632.1_g000014 Rmu_sc0006632.1_g000018 Rmu_sc0006681.1_g000010 Rmu_sc0006681.1_g000011 Rmu_sc0006733.1_g000003 Rmu_sc0007385.1_g000005 Rmu_sc0007385.1_g000007 Rmu_sc0007385.1_g000009 Rmu_sc0007385.1_g000016 Rmu_sc0007645.1_g000002 Rmu_sc0007645.1_g000003 Rmu_sc0007645.1_g000022 Rmu_sc0007828.1_g000008 Rmu_sc0008509.1_g000003 Rmu_sc0008509.1_g000015 Rmu_sc0008509.1_g000016 Rmu_sc0008509.1_g000020 Rmu_sc0008509.1_g000030 Rmu_sc0008509.1_g000041 Rmu_sc0008756.1_g000001 Rmu_sc0008756.1_g000003 Rmu_sc0013028.1_g000002 Rmu_sc0013028.1_g000003 Rmu_sc0013028.1_g000005 Rmu_sc0013160.1_g000001 Rmu_sc0014454.1_g000009 Rmu_sc0014455.1_g000007 Rmu_sc0014659.1_g000004 Rmu_sc0017798.1_g000002 Rmu_sc0017798.1_g000004 Rmu_sc0029608.1_g000001 Rmu_sc0037861.1_g000001 Rmu_sc0038750.1_g000001 Rmu_sc0042995.1_g000001 Rmu_ssc0000161.1_g000017
rosa_roxburghii Rroxscaffold_1G00009180 Rroxscaffold_1G00009190 Rroxscaffold_1G00011450 Rroxscaffold_1G00011480 Rroxscaffold_2G00111660 Rroxscaffold_2G00113570 Rroxscaffold_2G00122140 Rroxscaffold_3G00243730 Rroxscaffold_3G00245750 Rroxscaffold_3G00245760 Rroxscaffold_3G00250220 Rroxscaffold_3G00251160 Rroxscaffold_3G00251270 Rroxscaffold_3G00251280 Rroxscaffold_3G00251300 Rroxscaffold_3G00251340 Rroxscaffold_3G00251350 Rroxscaffold_3G00251390 Rroxscaffold_3G00251400 Rroxscaffold_3G00251560 Rroxscaffold_3G00251570 Rroxscaffold_3G00251870 Rroxscaffold_3G00252200 Rroxscaffold_3G00252210 Rroxscaffold_4G00279970 Rroxscaffold_4G00299970 Rroxscaffold_4G00300760 Rroxscaffold_4G00300780 Rroxscaffold_4G00300810 Rroxscaffold_4G00300850 Rroxscaffold_4G00307080 Rroxscaffold_4G00307100 Rroxscaffold_4G00313990 Rroxscaffold_6G00405080
rosa_rugosa Rorug01G0193600 Rorug01G0193700 Rorug01G0243800 Rorug01G0244000 Rorug01G0244000 Rorug01G0244400 Rorug01G0414300.1 Rorug01G0414500 Rorug01G0414600 Rorug02G0235600 Rorug02G0307900 Rorug02G0583100 Rorug02G0583200 Rorug02G0583300 Rorug05G0398000 Rorug05G0398100 Rorug05G0398200 Rorug05G0580300 Rorug05G0590300 Rorug06G0116000 Rorug06G0116100 Rorug07G0096800 Rorug07G0097100.1 Rorug07G0097200 Rorug07G0098600 Rorug07G0098600 Rorug07G0098700 Rorug07G0099100 Rorug07G0106100 Rorug07G0106200 Rorug07G0106200 Rorug07G0106300 Rorug07G0157600 Rorug07G0157700 Rorug07G0157700 Rorug07G0157800
rosa_samantha Rh1AG255500 Rh1AG256700 Rh1BG225800 Rh1BG226200 Rh1BG230000 Rh1CG195300 Rh1CG238400 Rh1CG238500 Rh1CG238900 Rh1CG239000 Rh1CG239300 Rh1CG239400 Rh1CG239800 Rh1CG240000 Rh1CG240200 Rh1CG240300 Rh1CG244300 Rh1CG406900 Rh1CG407300 Rh1CG407400 Rh2CG343600 Rh2DG383200 Rh3BG205900 Rh4AG404400 Rh4BG415500 Rh5AG455200 Rh5AG455600 Rh5CG497000 Rh5CG497200 Rh7AG228800 Rh7AG230400 Rh7AG230800 Rh7AG231200 Rh7AG231600 Rh7AG231800 Rh7AG232100 Rh7AG241600 Rh7BG236200 Rh7CG238200 Rh7CG239100 Rh7CG243400 Rh7CG244900
rosa_wichuraiana Rw0G023040 Rw1G017780 Rw1G022320 Rw1G022340 Rw1G022410 Rw1G022420 Rw1G022440 Rw1G022460 Rw1G022490 Rw1G022500 Rw1G022530 Rw1G022550 Rw1G022560 Rw1G022600 Rw1G023060 Rw1G038150 Rw1G038160 Rw2G008210 Rw2G022350 Rw2G029290 Rw4G015050 Rw4G019850 Rw5G024060 Rw5G042460 Rw7G019160 Rw7G019460 Rw7G019690 Rw7G019830 Rw7G019860 Rw7G019880 Rw7G019890 Rw7G019930 Rw7G019990 Rw7G020460 Rw7G025100 Rw7G025120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 382
AccI GTMKAC 1 cut(s) 1223
AccIII TCCGGA 1 cut(s) 1261
AciI CCGC 2 cut(s) 1373, 1658
AclI AACGTT 1 cut(s) 505
AclWI GGATC 3 cut(s) 1000, 1023, 1754
AcoI YGGCCR 2 cut(s) 35, 491
AcsI RAATTY 6 cut(s) 13, 613, 760, 1368, 1512, 1584
AcuI CTGAAG 1 cut(s) 59
AfeI AGCGCT 1 cut(s) 1243
AfiI CCNNNNNNNGG 2 cut(s) 481, 1769
AflIII ACRYGT 2 cut(s) 1185, 1341
AjnI CCWGG 1 cut(s) 608
AjuI GAANNNNNNNTTGG 2 cut(s) 1305, 1337
Alw26I GTCTC 3 cut(s) 95, 446, 708
AlwI GGATC 3 cut(s) 1000, 1023, 1754
Ama87I CYCGRG 2 cut(s) 563, 710
Aor13HI TCCGGA 1 cut(s) 1261
Aor51HI AGCGCT 1 cut(s) 1243
AoxI GGCC 4 cut(s) 35, 343, 491, 916
ApaI GGGCCC 1 cut(s) 920
ApeKI GCWGC 2 cut(s) 213, 360
ApoI RAATTY 6 cut(s) 13, 613, 760, 1368, 1512, 1584
ArsI GACNNNNNNTTYG 2 cut(s) 380, 412
AseI ATTAAT 2 cut(s) 129, 1269
Asp700I GAANNNNTTC 3 cut(s) 228, 506, 1799
AspLEI GCGC 1 cut(s) 1244
AspS9I GGNCC 4 cut(s) 257, 916, 917, 1652
AsuC2I CCSGG 3 cut(s) 757, 960, 1764
AvaI CYCGRG 2 cut(s) 563, 710
AvaII GGWCC 2 cut(s) 257, 1652
BaeGI GKGCMC 1 cut(s) 920
BalI TGGCCA 2 cut(s) 37, 493
BanII GRGCYC 1 cut(s) 920
BarI GAAGNNNNNNTAC 2 cut(s) 318, 350
BauI CACGAG 2 cut(s) 1280, 1677
BbsI GAAGAC 3 cut(s) 265, 1107, 1194
BbvI GCAGC 2 cut(s) 225, 372
BccI CCATC 5 cut(s) 269, 1150, 1354, 1676, 1718
BceAI ACGGC 1 cut(s) 23
BcgI CGANNNNNNTGC 2 cut(s) 1078, 1112
BciT130I CCWGG 1 cut(s) 610
BciVI GTATCC 1 cut(s) 327
BcnI CCSGG 3 cut(s) 757, 960, 1764
BcoDI GTCTC 3 cut(s) 95, 446, 708
BfaI CTAG 4 cut(s) 293, 302, 585, 732
BfoI RGCGCY 1 cut(s) 1245
BfuI GTATCC 1 cut(s) 327
BglII AGATCT 5 cut(s) 304, 601, 676, 748, 1042
BisI GCNGC 2 cut(s) 214, 361
BlpI GCTNAGC 1 cut(s) 364
BlsI GCNGC 2 cut(s) 215, 362
Bme1390I CCNGG 4 cut(s) 610, 757, 960, 1764
Bme18I GGWCC 2 cut(s) 257, 1652
BmeT110I CYCGRG 2 cut(s) 563, 710
BmgT120I GGNCC 4 cut(s) 257, 916, 917, 1652
BmiI GGNNCC 2 cut(s) 259, 918
BmrFI CCNGG 4 cut(s) 610, 757, 960, 1764
BpiI GAAGAC 3 cut(s) 265, 1107, 1194
Bpu10I CCTNAGC 1 cut(s) 854
Bpu1102I GCTNAGC 1 cut(s) 364
BpuEI CTTGAG 3 cut(s) 470, 484, 1677
BpuMI CCSGG 3 cut(s) 757, 960, 1764
BsaBI GATNNNNATC 2 cut(s) 105, 867
BsaI GGTCTC 2 cut(s) 446, 708
BsaJI CCNNGG 1 cut(s) 1063
BsaWI WCCGGW 1 cut(s) 1261
Bsc4I CCNNNNNNNGG 2 cut(s) 481, 1769
Bse8I GATNNNNATC 2 cut(s) 105, 867
BseAI TCCGGA 1 cut(s) 1261
BseBI CCWGG 1 cut(s) 610
BseDI CCNNGG 1 cut(s) 1063
BseGI GGATG 1 cut(s) 261
BseJI GATNNNNATC 2 cut(s) 105, 867
BseLI CCNNNNNNNGG 2 cut(s) 481, 1769
BseMII CTCAG 3 cut(s) 12, 429, 1185
BseRI GAGGAG 1 cut(s) 229
BseSI GKGCMC 1 cut(s) 920
BseXI GCAGC 2 cut(s) 225, 372
BseYI CCCAGC 1 cut(s) 919
BsgI GTGCAG 1 cut(s) 1155
BshFI GGCC 4 cut(s) 37, 345, 493, 918
BsiHKCI CYCGRG 2 cut(s) 563, 710
BsiSI CCGG 4 cut(s) 756, 960, 1262, 1764
BslFI GGGAC 1 cut(s) 243
BslI CCNNNNNNNGG 2 cut(s) 481, 1769
BsmAI GTCTC 3 cut(s) 95, 446, 708
BsmFI GGGAC 1 cut(s) 243
BsmI GAATGC 1 cut(s) 1737
BsnI GGCC 4 cut(s) 37, 345, 493, 918
Bso31I GGTCTC 2 cut(s) 446, 708
BsoBI CYCGRG 2 cut(s) 563, 710
Bsp120I GGGCCC 1 cut(s) 916
Bsp1286I GDGCHC 1 cut(s) 920
Bsp13I TCCGGA 1 cut(s) 1261
Bsp1720I GCTNAGC 1 cut(s) 364
Bsp19I CCATGG 1 cut(s) 1063
BspACI CCGC 2 cut(s) 1373, 1658
BspANI GGCC 4 cut(s) 37, 345, 493, 918
BspCNI CTCAG 3 cut(s) 13, 430, 1186
BspEI TCCGGA 1 cut(s) 1261
BspLI GGNNCC 2 cut(s) 259, 918
BspPI GGATC 3 cut(s) 1000, 1023, 1754
BspTNI GGTCTC 2 cut(s) 446, 708
BssECI CCNNGG 1 cut(s) 1063
BssSI CACGAG 2 cut(s) 1280, 1677
BssT1I CCWWGG 1 cut(s) 1063
Bst2BI CACGAG 2 cut(s) 1280, 1677
Bst2UI CCWGG 1 cut(s) 610
Bst4CI ACNGT 3 cut(s) 89, 1355, 1539
Bst6I CTCTTC 3 cut(s) 150, 169, 316
BstC8I GCNNGC 2 cut(s) 284, 1097
BstDSI CCRYGG 1 cut(s) 1063
BstF5I GGATG 1 cut(s) 261
BstH2I RGCGCY 1 cut(s) 1245
BstHHI GCGC 1 cut(s) 1244
BstMAI GTCTC 3 cut(s) 95, 446, 708
BstMWI GCNNNNNNNGC 3 cut(s) 721, 915, 1035
BstNI CCWGG 1 cut(s) 610
BstNSI RCATGY 3 cut(s) 286, 1189, 1345
BstSCI CCNGG 4 cut(s) 608, 755, 958, 1762
BstSLI GKGCMC 1 cut(s) 920
BstV1I GCAGC 2 cut(s) 225, 372
BstV2I GAAGAC 3 cut(s) 265, 1107, 1194
BstX2I RGATCY 6 cut(s) 304, 601, 676, 748, 1015, 1042
BstXI CCANNNNNNTGG 2 cut(s) 1064, 1505
BstYI RGATCY 6 cut(s) 304, 601, 676, 748, 1015, 1042
BsuI GTATCC 1 cut(s) 327
BsuRI GGCC 4 cut(s) 37, 345, 493, 918
BtgI CCRYGG 1 cut(s) 1063
BtsCI GGATG 1 cut(s) 261
BtsI GCAGTG 1 cut(s) 1143
BtsIMutI CAGTG 2 cut(s) 1143, 1406
Cac8I GCNNGC 2 cut(s) 284, 1097
CfoI GCGC 1 cut(s) 1244
Cfr13I GGNCC 4 cut(s) 257, 916, 917, 1652
CseI GACGC 1 cut(s) 357
CviAII CATG 8 cut(s) 283, 357, 489, 1064, 1186, 1342, 1462, 1715
DrdI GACNNNNNNGTC 1 cut(s) 382
DseDI GACNNNNNNGTC 1 cut(s) 382
EaeI YGGCCR 2 cut(s) 35, 491
Eam1104I CTCTTC 3 cut(s) 150, 169, 316
EarI CTCTTC 3 cut(s) 150, 169, 316
Eco130I CCWWGG 1 cut(s) 1063
Eco147I AGGCCT 1 cut(s) 345
Eco24I GRGCYC 1 cut(s) 920
Eco31I GGTCTC 2 cut(s) 446, 708
Eco32I GATATC 1 cut(s) 1503
Eco47I GGWCC 2 cut(s) 257, 1652
Eco47III AGCGCT 1 cut(s) 1243
Eco57I CTGAAG 1 cut(s) 59
Eco88I CYCGRG 2 cut(s) 563, 710
EcoO109I RGGNCCY 1 cut(s) 257
EcoRI GAATTC 3 cut(s) 613, 760, 1584
EcoRII CCWGG 1 cut(s) 608
EcoRV GATATC 1 cut(s) 1503
EcoT14I CCWWGG 1 cut(s) 1063
EcoT38I GRGCYC 1 cut(s) 920
ErhI CCWWGG 1 cut(s) 1063
FaeI CATG 8 cut(s) 286, 360, 492, 1067, 1189, 1345, 1465, 1718
FaqI GGGAC 1 cut(s) 243
FatI CATG 8 cut(s) 282, 356, 488, 1063, 1185, 1341, 1461, 1714
FauNDI CATATG 1 cut(s) 1155
FblI GTMKAC 1 cut(s) 1223
Fnu4HI GCNGC 2 cut(s) 214, 361
FokI GGATG 1 cut(s) 248
FriOI GRGCYC 1 cut(s) 920
Fsp4HI GCNGC 2 cut(s) 214, 361
FspBI CTAG 4 cut(s) 293, 302, 585, 732
GlaI GCGC 1 cut(s) 1243
GluI GCNGC 2 cut(s) 214, 361
GsaI CCCAGC 1 cut(s) 923
HaeII RGCGCY 1 cut(s) 1245
HaeIII GGCC 4 cut(s) 37, 345, 493, 918
HapII CCGG 4 cut(s) 756, 960, 1262, 1764
HgaI GACGC 1 cut(s) 357
HhaI GCGC 1 cut(s) 1244
Hin1II CATG 8 cut(s) 286, 360, 492, 1067, 1189, 1345, 1465, 1718
Hin6I GCGC 1 cut(s) 1242
HinP1I GCGC 1 cut(s) 1242
HincII GTYRAC 2 cut(s) 375, 1108
HindII GTYRAC 2 cut(s) 375, 1108
HindIII AAGCTT 2 cut(s) 1093, 1439
HpaI GTTAAC 1 cut(s) 1108
HpaII CCGG 4 cut(s) 756, 960, 1262, 1764
Hpy166II GTNNAC 6 cut(s) 375, 665, 812, 1108, 1224, 1652
Hpy188I TCNGA 5 cut(s) 22, 400, 862, 1195, 1805
Hpy8I GTNNAC 6 cut(s) 375, 665, 812, 1108, 1224, 1652
Hpy99I CGWCG 1 cut(s) 373
HpyAV CCTTC 7 cut(s) 104, 248, 320, 356, 1216, 1282, 1789
HpyCH4III ACNGT 3 cut(s) 89, 1355, 1539
HpyCH4IV ACGT 2 cut(s) 505, 825
HpyCH4V TGCA 4 cut(s) 360, 909, 1136, 1214
HpyF10VI GCNNNNNNNGC 3 cut(s) 721, 915, 1035
HpySE526I ACGT 2 cut(s) 505, 825
Hsp92II CATG 8 cut(s) 286, 360, 492, 1067, 1189, 1345, 1465, 1718
HspAI GCGC 1 cut(s) 1242
Kpn2I TCCGGA 1 cut(s) 1261
KspAI GTTAAC 1 cut(s) 1108
Lsp1109I GCAGC 2 cut(s) 225, 372
MaeI CTAG 4 cut(s) 293, 302, 585, 732
MaeII ACGT 2 cut(s) 505, 825
MaeIII GTNAC 2 cut(s) 295, 1457
MfeI CAATTG 1 cut(s) 392
MflI RGATCY 6 cut(s) 304, 601, 676, 748, 1015, 1042
MhlI GDGCHC 1 cut(s) 920
MlsI TGGCCA 2 cut(s) 37, 493
MluNI TGGCCA 2 cut(s) 37, 493
MlyI GAGTC 1 cut(s) 407
MmeI TCCRAC 3 cut(s) 267, 339, 1452
MnlI CCTC 9 cut(s) 16, 65, 151, 170, 250, 403, 665, 812, 913
Mox20I TGGCCA 2 cut(s) 37, 493
MroI TCCGGA 1 cut(s) 1261
MroXI GAANNNNTTC 3 cut(s) 228, 506, 1799
MscI TGGCCA 2 cut(s) 37, 493
MseI TTAA 7 cut(s) 129, 420, 518, 1107, 1269, 1614, 1787
MslI CAYNNNNRTG 5 cut(s) 281, 1231, 1340, 1466, 1719
Msp20I TGGCCA 2 cut(s) 37, 493
MspA1I CMGCKG 1 cut(s) 1660
MspI CCGG 4 cut(s) 756, 960, 1262, 1764
MspR9I CCNGG 4 cut(s) 610, 757, 960, 1764
MunI CAATTG 1 cut(s) 392
Mva1269I GAATGC 1 cut(s) 1737
MvaI CCWGG 1 cut(s) 610
MwoI GCNNNNNNNGC 3 cut(s) 721, 915, 1035
NciI CCSGG 3 cut(s) 757, 960, 1764
NcoI CCATGG 1 cut(s) 1063
NdeI CATATG 1 cut(s) 1155
NlaIII CATG 8 cut(s) 286, 360, 492, 1067, 1189, 1345, 1465, 1718
NlaIV GGNNCC 2 cut(s) 259, 918
NspI RCATGY 3 cut(s) 286, 1189, 1345
PaeI GCATGC 1 cut(s) 286
PceI AGGCCT 1 cut(s) 345
PciI ACATGT 2 cut(s) 1185, 1341
PctI GAATGC 1 cut(s) 1737
PdmI GAANNNNTTC 3 cut(s) 228, 506, 1799
PfoI TCCNGGA 3 cut(s) 608, 755, 1762
PkrI GCNGC 2 cut(s) 215, 362
PleI GAGTC 1 cut(s) 407
PpsI GAGTC 1 cut(s) 407
PpuMI RGGWCCY 1 cut(s) 257
PscI ACATGT 2 cut(s) 1185, 1341
PshBI ATTAAT 2 cut(s) 129, 1269
Psp1406I AACGTT 1 cut(s) 505
Psp5II RGGWCCY 1 cut(s) 257
Psp6I CCWGG 1 cut(s) 608
PspFI CCCAGC 1 cut(s) 919
PspGI CCWGG 1 cut(s) 608
PspN4I GGNNCC 2 cut(s) 259, 918
PspOMI GGGCCC 1 cut(s) 916
PspPI GGNCC 4 cut(s) 257, 916, 917, 1652
PspPPI RGGWCCY 1 cut(s) 257
PsuI RGATCY 6 cut(s) 304, 601, 676, 748, 1015, 1042
RseI CAYNNNNRTG 5 cut(s) 281, 1231, 1340, 1466, 1719
SaqAI TTAA 7 cut(s) 129, 420, 518, 1107, 1269, 1614, 1787
SatI GCNGC 2 cut(s) 214, 361
Sau96I GGNCC 4 cut(s) 257, 916, 917, 1652
SchI GAGTC 1 cut(s) 407
ScrFI CCNGG 4 cut(s) 610, 757, 960, 1764
SduI GDGCHC 1 cut(s) 920
SinI GGWCC 2 cut(s) 257, 1652
SmiMI CAYNNNNRTG 5 cut(s) 281, 1231, 1340, 1466, 1719
SmlI CTYRAG 3 cut(s) 449, 463, 1692
SmoI CTYRAG 3 cut(s) 449, 463, 1692
SphI GCATGC 1 cut(s) 286
SseBI AGGCCT 1 cut(s) 345
SsiI CCGC 2 cut(s) 1373, 1658
SspI AATATT 1 cut(s) 189
SspMI CTAG 4 cut(s) 293, 302, 585, 732
StuI AGGCCT 1 cut(s) 345
StyD4I CCNGG 4 cut(s) 608, 755, 958, 1762
StyI CCWWGG 1 cut(s) 1063
TaaI ACNGT 3 cut(s) 89, 1355, 1539
TaiI ACGT 2 cut(s) 508, 828
TaqI TCGA 4 cut(s) 324, 1088, 1178, 1302
Tru1I TTAA 7 cut(s) 129, 420, 518, 1107, 1269, 1614, 1787
Tru9I TTAA 7 cut(s) 129, 420, 518, 1107, 1269, 1614, 1787
TscAI CASTG 2 cut(s) 1143, 1413
TseI GCWGC 2 cut(s) 213, 360
TspDTI ATGAA 5 cut(s) 221, 875, 1067, 1266, 1478
TspRI CASTG 2 cut(s) 1143, 1413
VpaK11BI GGWCC 2 cut(s) 257, 1652
VspI ATTAAT 2 cut(s) 129, 1269
XapI RAATTY 6 cut(s) 13, 613, 760, 1368, 1512, 1584
XceI RCATGY 3 cut(s) 286, 1189, 1345
XmiI GTMKAC 1 cut(s) 1223
XmnI GAANNNNTTC 3 cut(s) 228, 506, 1799
XspI CTAG 4 cut(s) 293, 302, 585, 732
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.