Rroxscaffold_4G00299970

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
Physical Location & Seq
Reverse (-)
19883618 .. 19886527
2910 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00299970.1

Sequence Viewer

Length: 2910 bp
ATGGAAGGAGGGTGCCTTAAACAGCTTGTTTATGCATCTATGCTGCTCTTGCTACTGATACATATCAATATTAGCCCATCCCTGTCCCTTGAATTCAATCATTCTGATGGTAATTACGTGAGGTGCATAGAGAGGGAAAGGCAAGCACTCCTTGCTTTTAAAAAAGGCTTCACTGGGTATGGCGGTGACGAAGAACTACTGTCATCATGGGGAGGGAAAGAAGCCCAAAAGCAAGACTGTTGCGGATGGCGAGGAGTCTACTGCGACAAACGAACTGGTCATGTTACACGACTTCATCTTGGAGACCAACATTTGAGAGGTACGGTTAGTCCTAAACTCATTGAGTTGCAGCATTTGGAATTTTTTCATCTCGGATTCAGTGGGAGCCAAATTCCAAATTTCATTGGTTCACTTACCAATTTAAGGTACCTTCATCTTGGTGAATTTGATGATGGAAAATTTCCATATCAGCTTGGAAACCTTACGCACTTGCAATATCTCAGTCTCACTGGTAGTAACTACAACGGTGTTGAACTAGAAAATAACCTCAATTGGCTTCCTTATCTCTCTTCTTTAAAATACTTGGACCTGAGTTTCAATTATCTCGGCAACGTATTTGATTGGCTAGAAATAGTAAACAAGCTCCCAAATCTAAGAAACTTAACATTAGAACAATGTAATCTTCCTCCTCCAATCTTTTCCACTCTTTCTCACATAAATTATTCCAAATCTCTAGCTAGTGTTAAGCTTCATTACAGCCCGAATGCCACTGCCACTACTTCTTCAATGTTCAAGTGGTTGGGCAACTACAATATCAGCCTTGTTTATCTTAAGCTCACATACACAAATTTATATGGTTCACTTCCTGATGTTTTTGAAAACATGAGGTCTCTTGCATATCTTGATCTCTCAGTGAACAATCTTGAAGGTGGGATCCCGCTTTCCTTTGCTAATTTATCTAGTTTGCGATGGTTGTCGCTTTCGTACAACAATCTCAGTGGACAATATTCCGATTTTCTGCAAATATTGTCGAACTGTGCTCGAAACTCATTGAAGTATCTAGACCTCTCTGGGAATCACCACATTTCTGGGTCATTGCCTAATCTTATAAATTTTTCGTCCCTCAAGTATTTATCTCTCTCAAGCACAGGATTGTCTGGAACAGTACCCGAATGTATAGGTGAAATGTCCAAGTTGGAGGGGATCGAAATGGCTAATACTTCTTTGGAAGGGACCATTTCTGAAACTCATTTCTCACAACTGTCCAGATTATTGGTTTTAGATTTATCACATAACTCGCTAGCTTTTAACTTCAGTGCTGATTGGGTTCCTCCTTTTCAATTGGAGAGCATAGTATTAAGCGAGTGCAAGATGAGTCCCTCTTTACCTCCGTGGCTTCAATCGCAAAAGAAACTTTTAAACATTTATATGTTCGATGCTAGAATTTCTGATATCCTTCCAAGTTGGTTTTGGGATTGGTCTCATAAGGCAACACAGATCGACCTTTCTTGCAATCAAATTAGAGGAACATTGGAAAATATGAGTTTCGAGTTTGTACGTAACCCTGGGCTTAATTTGAGTTGGAACTTATTGGAAGGTCCCATCCACTCATCAGTACTTTCAAATGCATCATATGTCGTCCTCTCCAATAATAAATTTTCAGGGCCAGCTTCTTTCTTGTGTGCTGCAAAGGTTAGTGACTTGACCTATCTTGATCTCTCAAGCAACAATCTTTCTGGAGAACTTCCTAATTGCTGGTCTCATTTCAAAAGTTTAATCTTTCTTGATTTGAGTAACAATTCATTTTCCGGAAAAGTTCCTACCACAATGGGGAAGTTAATTTCCATTGAGTCATTGAAACTAGACAACAACAAATTTGTGGGAGAATTTCCTTCCTTGAAGAATTGCACAAACTTAAAAGCTTTTGATCTGGAAGACAACAAATTTTCAGGACCTATACCTAACTGGGTAGGGGTTCTATTTCCAAATTTGGCTATCCTTATCCTTCGATCCAATCTCTTCAATGGTAGCATGCCGTCACAATTATGTAATCTCACAAGTATTCGTGTTTTGGATTTTTCAATTAATAACATCTCCGGAAGTATACCCAAATGTCTCAACAATTTGACTACTTTAGCTCGAGAAGGAAATCCAGAAGATCTAACCATCAGTCATATGTACATAACTACTGAGGGACCATTTCCTGACTTCCATGGTGTGGAGATTGAATACATTACTTTGCCTTTTGGCGATTTTTATGAAGATGAAATAACCATCTCATGGAAAGGAACACTGTCCAGATACAAAAGTACTTTGGGACTTGTAAAAAGTGTTGATCTGTCAAGCAACAAGTTGACAGGGGAGATTCCCAGTGACATCGTTCATCTTGTTGGGTTAGTTTCTCGGAACTTGTCGAGAAACCATTTAACCGGTCAAATAAATAGAGAGATGGGCAAGCTGCAGTCATTACAGTCCCTTGATTTATCAAGAAACCTATTACATGGCACAATTCCCACAAGTGTTTTTCAAATATATGGTCTTGGTTATTTGAACTTGTCCCACAACAACCTTTCCGGAAAGATTCCAATCGGTTCTCAGCTCCAAAACTACGGCCCCTCTTCTTTCGTTGGAAATCCTCAGCTTTGTGGACTTCCACTTGAGAGGTCCTGTTATCCAGATAAGGAAAACAGTCCCCATGGGAATCAAGAAGATGATGACGGGCTCATCACACAAGGATTTTATATCAGTGTAGGGCTTGGATTTTTTGCTGGATTTTGGGGAGTTTGTGGCAGTTTGATTTTCAACAAGTCATGGAGATACGGGTACTCCAAATTCTTTAATCTTCTGAACGACTGGCTTTATGTGAGAATAACTTTAATCAGGAGGCAACTAAAGAATAGACTAGCTTAG

Protein Analysis

969

Amino Acids

108.46

Weight (kDa)

6.28

Isoelectric Point (pI)

41.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 45 - 89 1e-08 Leucine rich repeat N-terminal domain
LRR_14 PF23598 109 - 227 9.2e-08 Leucine-rich repeat region
LRR_8 PF13855 273 - 332 1.7e-09 Leucine rich repeat
LRR_8 PF13855 374 - 434 3.2e-06 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000028)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g45420 FvH4_4g14031 FvH4_5g20780 FvH4_6g28530 FvH4_7g14020 FvH4_7g14030 FvH4_7g14040 FvH4_7g14050 FvH4_7g14060 FvH4_7g14070 FvH4_7g14090 FvH4_7g14110 FvH4_7g14140 FvH4_7g14450
malus_domestica MD00G1189100.v1.1 MD01G1018600.v1.1 MD01G1053800.v1.1 MD01G1053900.v1.1 MD01G1054000.v1.1 MD01G1054100.v1.1 MD01G1056700.v1.1 MD01G1057000.v1.1 MD01G1057300.v1.1 MD01G1057400.v1.1 MD01G1061600.v1.1 MD01G1061800.v1.1 MD01G1061900.v1.1 MD01G1062000.v1.1 MD01G1062400.v1.1 MD01G1062500.v1.1 MD01G1063200.v1.1 MD01G1063300.v1.1 MD01G1063400.v1.1 MD01G1063700.v1.1 MD01G1063900.v1.1 MD01G1064200.v1.1 MD01G1064300.v1.1 MD01G1064400.v1.1 MD01G1064600.v1.1 MD01G1064700.v1.1 MD01G1181100.v1.1 MD01G1212300.v1.1 MD01G1212500.v1.1 MD01G1212600.v1.1 MD02G1271900.v1.1 MD07G1136500.v1.1 MD07G1139300.v1.1 MD07G1141200.v1.1 MD07G1144700.v1.1 MD08G1144200.v1.1 MD14G1186300.v1.1 MD14G1186500.v1.1 MD14G1186700.v1.1 MD14G1186800.v1.1 MD15G1351300.v1.1 MD15G1439500.v1.1
prunus_persica Prupe.1G067000_v2.0.a1 Prupe.2G077400_v2.0.a1 Prupe.2G077700_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078600_v2.0.a1 Prupe.2G078800_v2.0.a1 Prupe.2G099600_v2.0.a1 Prupe.2G099700_v2.0.a1 Prupe.2G155100_v2.0.a1 Prupe.2G155500_v2.0.a1 Prupe.2G155600_v2.0.a1 Prupe.2G155800_v2.0.a1 Prupe.2G155900_v2.0.a1 Prupe.2G156100_v2.0.a1 Prupe.2G166100_v2.0.a1 Prupe.2G166300_v2.0.a1 Prupe.2G167500_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G168400_v2.0.a1 Prupe.2G168700_v2.0.a1 Prupe.2G168800_v2.0.a1 Prupe.2G169000_v2.0.a1 Prupe.2G169100_v2.0.a1 Prupe.2G169200_v2.0.a1 Prupe.2G169500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G172300_v2.0.a1 Prupe.2G304800_v2.0.a1 Prupe.4G264800_v2.0.a1 Prupe.4G265000_v2.0.a1 Prupe.5G051900_v2.0.a1 Prupe.5G052000_v2.0.a1
pyrus_communis pycom01g08380 pycom01g08430 pycom01g08490 pycom01g08520 pycom01g08540 pycom01g08550 pycom01g08600 pycom01g08630 pycom01g08660 pycom01g08720 pycom01g09180 pycom01g09200 pycom01g09210 pycom01g09270 pycom01g09280 pycom01g09300 pycom01g09380 pycom01g19110 pycom01g22260 pycom01g22310 pycom01g22330 pycom01g22350 pycom01g22360 pycom02g23250 pycom07g13420 pycom07g13670 pycom07g13900 pycom07g13910 pycom07g13960 pycom07g13970 pycom07g25680 pycom11g22830
rosa_chinensis RchiOBHm_Chr0c22g0500431 RchiOBHm_Chr0c22g0500441 RchiOBHm_Chr0c22g0500561 RchiOBHm_Chr0c22g0500571 RchiOBHm_Chr0c22g0500611 RchiOBHm_Chr0c22g0500621 RchiOBHm_Chr0c22g0500631 RchiOBHm_Chr0c22g0500681 RchiOBHm_Chr1g0348221 RchiOBHm_Chr1g0348251 RchiOBHm_Chr1g0352861 RchiOBHm_Chr1g0352871 RchiOBHm_Chr1g0352891 RchiOBHm_Chr1g0352901 RchiOBHm_Chr1g0354671 RchiOBHm_Chr1g0354701 RchiOBHm_Chr1g0354711 RchiOBHm_Chr1g0354751 RchiOBHm_Chr1g0354761 RchiOBHm_Chr1g0354841 RchiOBHm_Chr1g0354851 RchiOBHm_Chr1g0354881 RchiOBHm_Chr1g0354971 RchiOBHm_Chr1g0354981 RchiOBHm_Chr1g0354991 RchiOBHm_Chr1g0355001 RchiOBHm_Chr1g0355011 RchiOBHm_Chr1g0355021 RchiOBHm_Chr1g0355861 RchiOBHm_Chr1g0379671 RchiOBHm_Chr1g0379681 RchiOBHm_Chr2g0096591 RchiOBHm_Chr2g0132821 RchiOBHm_Chr3g0454901 RchiOBHm_Chr3g0472711 RchiOBHm_Chr4g0400791 RchiOBHm_Chr5g0069481 RchiOBHm_Chr5g0069511 RchiOBHm_Chr5g0069551 RchiOBHm_Chr6g0254651 RchiOBHm_Chr6g0259721 RchiOBHm_Chr7g0205911 RchiOBHm_Chr7g0206401 RchiOBHm_Chr7g0206571 RchiOBHm_Chr7g0206581 RchiOBHm_Chr7g0206621 RchiOBHm_Chr7g0206631 RchiOBHm_Chr7g0206641 RchiOBHm_Chr7g0206681 RchiOBHm_Chr7g0206691 RchiOBHm_Chr7g0206751 RchiOBHm_Chr7g0206761 RchiOBHm_Chr7g0206851 RchiOBHm_Chr7g0206911 RchiOBHm_Chr7g0206921 RchiOBHm_Chr7g0207001 RchiOBHm_Chr7g0207011 RchiOBHm_Chr7g0207031 RchiOBHm_Chr7g0207101 RchiOBHm_Chr7g0207161 RchiOBHm_Chr7g0207201 RchiOBHm_Chr7g0207271 RchiOBHm_Chr7g0207301 RchiOBHm_Chr7g0207311 RchiOBHm_Chr7g0207421 RchiOBHm_Chr7g0207481 RchiOBHm_Chr7g0207491 RchiOBHm_Chr7g0207501 RchiOBHm_Chr7g0207521 RchiOBHm_Chr7g0207531 RchiOBHm_Chr7g0207561 RchiOBHm_Chr7g0207571 RchiOBHm_Chr7g0207581 RchiOBHm_Chr7g0207601 RchiOBHm_Chr7g0207621 RchiOBHm_Chr7g0207631 RchiOBHm_Chr7g0207651 RchiOBHm_Chr7g0207661 RchiOBHm_Chr7g0207711 RchiOBHm_Chr7g0207761 RchiOBHm_Chr7g0207801 RchiOBHm_Chr7g0208821 RchiOBHm_Chr7g0208831 RchiOBHm_Chr7g0208841 RchiOBHm_Chr7g0213601 RchiOBHm_Chr7g0215981 RchiOBHm_Chr7g0216021
rosa_laevigata RLG00000003193 RLG00000003194 RLG00000003287 RLG00000003288 RLG00000003289 RLG00000003293 RLG00000003294 RLG00000003295 RLG00000003297 RLG00000003299 RLG00000003301 RLG00000003327 RLG00000003347 RLG00000016653 RLG00000018642 RLG00000018643 RLG00000019285 RLG00000022542 RLG00000026368 RLG00000026371 RLG00000028124 RLG00000028125 RLG00000028183 RLG00000028184 RLG00000028185 RLG00000028188 RLG00000028673 RLG00000029267 RLG00000029325 RLG00000029674 RLG00000032883 RLG00000036055 RLG00000036058 RLG00000036065 RLG00000036068 RLG00000036071 RLG00000036072 RLG00000036075 RLG00000036076
rosa_multiflora Rmu_co8250183.1_g000001 Rmu_co8271981.1_g000001 Rmu_co8410829.1_g000001 Rmu_co8432879.1_g000001 Rmu_co8441941.1_g000001 Rmu_sc0000076.1_g000031 Rmu_sc0000738.1_g000038 Rmu_sc0000848.1_g000003 Rmu_sc0000848.1_g000014 Rmu_sc0000848.1_g000015 Rmu_sc0000848.1_g000016 Rmu_sc0001264.1_g000001 Rmu_sc0002284.1_g000018 Rmu_sc0002356.1_g000011 Rmu_sc0003020.1_g000003 Rmu_sc0003115.1_g000001 Rmu_sc0003115.1_g000002 Rmu_sc0003115.1_g000003 Rmu_sc0003115.1_g000004 Rmu_sc0003115.1_g000005 Rmu_sc0003115.1_g000008 Rmu_sc0003115.1_g000010 Rmu_sc0003115.1_g000011 Rmu_sc0003115.1_g000014 Rmu_sc0003565.1_g000002 Rmu_sc0003652.1_g000013 Rmu_sc0003652.1_g000015 Rmu_sc0003652.1_g000016 Rmu_sc0003652.1_g000019 Rmu_sc0003940.1_g000001 Rmu_sc0003940.1_g000004 Rmu_sc0003940.1_g000009 Rmu_sc0004084.1_g000010 Rmu_sc0004705.1_g000021 Rmu_sc0004972.1_g000007 Rmu_sc0004987.1_g000002 Rmu_sc0004987.1_g000006 Rmu_sc0005065.1_g000018 Rmu_sc0005065.1_g000029 Rmu_sc0005391.1_g000002 Rmu_sc0005633.1_g000003 Rmu_sc0005633.1_g000008 Rmu_sc0006632.1_g000014 Rmu_sc0006632.1_g000018 Rmu_sc0006681.1_g000010 Rmu_sc0006681.1_g000011 Rmu_sc0006733.1_g000003 Rmu_sc0007385.1_g000005 Rmu_sc0007385.1_g000007 Rmu_sc0007385.1_g000009 Rmu_sc0007385.1_g000016 Rmu_sc0007645.1_g000002 Rmu_sc0007645.1_g000003 Rmu_sc0007645.1_g000022 Rmu_sc0007828.1_g000008 Rmu_sc0008509.1_g000003 Rmu_sc0008509.1_g000015 Rmu_sc0008509.1_g000016 Rmu_sc0008509.1_g000020 Rmu_sc0008509.1_g000030 Rmu_sc0008509.1_g000041 Rmu_sc0008756.1_g000001 Rmu_sc0008756.1_g000003 Rmu_sc0013028.1_g000002 Rmu_sc0013028.1_g000003 Rmu_sc0013028.1_g000005 Rmu_sc0013160.1_g000001 Rmu_sc0014454.1_g000009 Rmu_sc0014455.1_g000007 Rmu_sc0014659.1_g000004 Rmu_sc0017798.1_g000002 Rmu_sc0017798.1_g000004 Rmu_sc0029608.1_g000001 Rmu_sc0037861.1_g000001 Rmu_sc0038750.1_g000001 Rmu_sc0042995.1_g000001 Rmu_ssc0000161.1_g000017
rosa_roxburghii Rroxscaffold_1G00009180 Rroxscaffold_1G00009190 Rroxscaffold_1G00011450 Rroxscaffold_1G00011480 Rroxscaffold_2G00111660 Rroxscaffold_2G00113570 Rroxscaffold_2G00122140 Rroxscaffold_3G00243730 Rroxscaffold_3G00245750 Rroxscaffold_3G00245760 Rroxscaffold_3G00250220 Rroxscaffold_3G00251160 Rroxscaffold_3G00251270 Rroxscaffold_3G00251280 Rroxscaffold_3G00251300 Rroxscaffold_3G00251340 Rroxscaffold_3G00251350 Rroxscaffold_3G00251390 Rroxscaffold_3G00251400 Rroxscaffold_3G00251560 Rroxscaffold_3G00251570 Rroxscaffold_3G00251870 Rroxscaffold_3G00252200 Rroxscaffold_3G00252210 Rroxscaffold_4G00279970 Rroxscaffold_4G00299970 Rroxscaffold_4G00300760 Rroxscaffold_4G00300780 Rroxscaffold_4G00300810 Rroxscaffold_4G00300850 Rroxscaffold_4G00307080 Rroxscaffold_4G00307100 Rroxscaffold_4G00313990 Rroxscaffold_6G00405080
rosa_rugosa Rorug01G0193600 Rorug01G0193700 Rorug01G0243800 Rorug01G0244000 Rorug01G0244000 Rorug01G0244400 Rorug01G0414300.1 Rorug01G0414500 Rorug01G0414600 Rorug02G0235600 Rorug02G0307900 Rorug02G0583100 Rorug02G0583200 Rorug02G0583300 Rorug05G0398000 Rorug05G0398100 Rorug05G0398200 Rorug05G0580300 Rorug05G0590300 Rorug06G0116000 Rorug06G0116100 Rorug07G0096800 Rorug07G0097100.1 Rorug07G0097200 Rorug07G0098600 Rorug07G0098600 Rorug07G0098700 Rorug07G0099100 Rorug07G0106100 Rorug07G0106200 Rorug07G0106200 Rorug07G0106300 Rorug07G0157600 Rorug07G0157700 Rorug07G0157700 Rorug07G0157800
rosa_samantha Rh1AG255500 Rh1AG256700 Rh1BG225800 Rh1BG226200 Rh1BG230000 Rh1CG195300 Rh1CG238400 Rh1CG238500 Rh1CG238900 Rh1CG239000 Rh1CG239300 Rh1CG239400 Rh1CG239800 Rh1CG240000 Rh1CG240200 Rh1CG240300 Rh1CG244300 Rh1CG406900 Rh1CG407300 Rh1CG407400 Rh2CG343600 Rh2DG383200 Rh3BG205900 Rh4AG404400 Rh4BG415500 Rh5AG455200 Rh5AG455600 Rh5CG497000 Rh5CG497200 Rh7AG228800 Rh7AG230400 Rh7AG230800 Rh7AG231200 Rh7AG231600 Rh7AG231800 Rh7AG232100 Rh7AG241600 Rh7BG236200 Rh7CG238200 Rh7CG239100 Rh7CG243400 Rh7CG244900
rosa_wichuraiana Rw0G023040 Rw1G017780 Rw1G022320 Rw1G022340 Rw1G022410 Rw1G022420 Rw1G022440 Rw1G022460 Rw1G022490 Rw1G022500 Rw1G022530 Rw1G022550 Rw1G022560 Rw1G022600 Rw1G023060 Rw1G038150 Rw1G038160 Rw2G008210 Rw2G022350 Rw2G029290 Rw4G015050 Rw4G019850 Rw5G024060 Rw5G042460 Rw7G019160 Rw7G019460 Rw7G019690 Rw7G019830 Rw7G019860 Rw7G019880 Rw7G019890 Rw7G019930 Rw7G019990 Rw7G020460 Rw7G025100 Rw7G025120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1109
Acc65I GGTACC 1 cut(s) 426
AccB1I GGYRCC 2 cut(s) 12, 426
AccB7I CCANNNNNTGG 2 cut(s) 2218, 2280
AccI GTMKAC 2 cut(s) 258, 2104
AccIII TCCGGA 3 cut(s) 1808, 2096, 2573
AciI CCGC 3 cut(s) 183, 243, 938
AclWI GGATC 4 cut(s) 928, 941, 1211, 2004
AcuI CTGAAG 1 cut(s) 1297
AfaI GTAC 9 cut(s) 322, 428, 986, 1167, 1557, 1617, 2180, 2311, 2825
AfiI CCNNNNNNNGG 4 cut(s) 423, 1830, 2218, 2280
AflII CTTAAG 1 cut(s) 830
AgeI ACCGGT 1 cut(s) 2429
AjnI CCWGG 1 cut(s) 1564
Alw21I GWGCWC 1 cut(s) 1042
Alw26I GTCTC 6 cut(s) 297, 509, 894, 1485, 1764, 2120
AlwI GGATC 4 cut(s) 928, 941, 1211, 2004
Ama87I CYCGRG 1 cut(s) 2139
Aor13HI TCCGGA 3 cut(s) 1808, 2096, 2573
AoxI GGCC 2 cut(s) 1664, 2611
ApeKI GCWGC 4 cut(s) 43, 349, 1685, 2458
ArsI GACNNNNNNTTYG 2 cut(s) 2521, 2553
AseI ATTAAT 1 cut(s) 2085
AsiGI ACCGGT 1 cut(s) 2429
Asp700I GAANNNNTTC 1 cut(s) 363
Asp718I GGTACC 1 cut(s) 426
AspS9I GGNCC 8 cut(s) 586, 1233, 1598, 1664, 1952, 2195, 2612, 2664
AsuHPI GGTGA 4 cut(s) 197, 452, 1070, 1193
AsuNHI GCTAGC 1 cut(s) 1300
AvaI CYCGRG 1 cut(s) 2139
AvaII GGWCC 6 cut(s) 586, 1233, 1598, 1952, 2195, 2664
BaeI ACNNNNGTAYC 2 cut(s) 2293, 2326
BamHI GGATCC 1 cut(s) 933
BanI GGYRCC 2 cut(s) 12, 426
BanII GRGCYC 1 cut(s) 2724
BbsI GAAGAC 1 cut(s) 1941
Bbv12I GWGCWC 1 cut(s) 1042
BbvCI CCTCAGC 1 cut(s) 2637
BbvI GCAGC 4 cut(s) 30, 361, 1672, 2445
BccI CCATC 9 cut(s) 85, 101, 240, 446, 963, 1610, 2174, 2282, 2443
BceAI ACGGC 2 cut(s) 2020, 2626
BciT130I CCWGG 1 cut(s) 1566
BcoDI GTCTC 6 cut(s) 297, 509, 894, 1485, 1764, 2120
BfmI CTRYAG 1 cut(s) 2459
BfrI CTTAAG 1 cut(s) 830
BglII AGATCT 1 cut(s) 2158
BisI GCNGC 4 cut(s) 44, 350, 1686, 2459
BlsI GCNGC 4 cut(s) 45, 351, 1687, 2460
BmcAI AGTACT 2 cut(s) 1617, 2311
Bme1390I CCNGG 1 cut(s) 1566
Bme18I GGWCC 6 cut(s) 586, 1233, 1598, 1952, 2195, 2664
BmeT110I CYCGRG 1 cut(s) 2139
BmgT120I GGNCC 8 cut(s) 586, 1233, 1598, 1664, 1952, 2195, 2612, 2664
BmiI GGNNCC 9 cut(s) 14, 386, 428, 935, 1234, 1329, 1600, 2196, 2614
BmrFI CCNGG 1 cut(s) 1566
BmrI ACTGGG 3 cut(s) 183, 1975, 2364
BmsI GCATC 3 cut(s) 44, 1426, 1637
BmtI GCTAGC 1 cut(s) 1304
BmuI ACTGGG 3 cut(s) 183, 1975, 2364
BpiI GAAGAC 1 cut(s) 1941
BpmI CTGGAG 1 cut(s) 1758
Bpu10I CCTNAGC 1 cut(s) 2637
BpuEI CTTGAG 4 cut(s) 1109, 1126, 1705, 2678
BsaAI YACGTR 2 cut(s) 118, 1559
BsaBI GATNNNNATC 2 cut(s) 62, 2585
BsaI GGTCTC 4 cut(s) 297, 894, 1485, 1764
BsaJI CCNNGG 5 cut(s) 1391, 1564, 1565, 2212, 2695
BsaWI WCCGGW 4 cut(s) 1808, 2096, 2429, 2573
BsaXI ACNNNNNCTCC 2 cut(s) 2810, 2840
Bsc4I CCNNNNNNNGG 4 cut(s) 423, 1830, 2218, 2280
Bse118I RCCGGY 1 cut(s) 2429
Bse1I ACTGG 6 cut(s) 178, 280, 514, 1970, 2370, 2858
Bse3DI GCAATG 1 cut(s) 1094
Bse8I GATNNNNATC 2 cut(s) 62, 2585
BseAI TCCGGA 3 cut(s) 1808, 2096, 2573
BseBI CCWGG 1 cut(s) 1566
BseDI CCNNGG 5 cut(s) 1391, 1564, 1565, 2212, 2695
BseGI GGATG 3 cut(s) 77, 251, 1602
BseJI GATNNNNATC 2 cut(s) 62, 2585
BseLI CCNNNNNNNGG 4 cut(s) 423, 1830, 2218, 2280
BseMI GCAATG 1 cut(s) 1094
BseMII CTCAG 7 cut(s) 514, 581, 924, 1009, 2181, 2609, 2651
BseNI ACTGG 6 cut(s) 178, 280, 514, 1970, 2370, 2858
BseRI GAGGAG 2 cut(s) 267, 678
BseXI GCAGC 4 cut(s) 30, 361, 1672, 2445
BshFI GGCC 2 cut(s) 1666, 2613
BshNI GGYRCC 2 cut(s) 12, 426
BshTI ACCGGT 1 cut(s) 2429
BsiHKAI GWGCWC 1 cut(s) 1042
BsiHKCI CYCGRG 1 cut(s) 2139
BsiSI CCGG 4 cut(s) 1809, 2097, 2430, 2574
BslI CCNNNNNNNGG 4 cut(s) 423, 1830, 2218, 2280
BsmAI GTCTC 6 cut(s) 297, 509, 894, 1485, 1764, 2120
BsmI GAATGC 1 cut(s) 769
BsnI GGCC 2 cut(s) 1666, 2613
Bso31I GGTCTC 4 cut(s) 297, 894, 1485, 1764
BsoBI CYCGRG 1 cut(s) 2139
Bsp1286I GDGCHC 2 cut(s) 1042, 2724
Bsp13I TCCGGA 3 cut(s) 1808, 2096, 2573
Bsp1407I TGTACA 1 cut(s) 2178
Bsp143I GATC 9 cut(s) 904, 933, 1203, 1497, 1714, 1927, 2009, 2158, 2335
Bsp19I CCATGG 2 cut(s) 2212, 2695
BspACI CCGC 3 cut(s) 183, 243, 938
BspANI GGCC 2 cut(s) 1666, 2613
BspCNI CTCAG 7 cut(s) 513, 582, 923, 1008, 2182, 2608, 2650
BspEI TCCGGA 3 cut(s) 1808, 2096, 2573
BspLI GGNNCC 9 cut(s) 14, 386, 428, 935, 1234, 1329, 1600, 2196, 2614
BspMAI CTGCAG 1 cut(s) 2463
BspOI GCTAGC 1 cut(s) 1304
BspPI GGATC 4 cut(s) 928, 941, 1211, 2004
BspT107I GGYRCC 2 cut(s) 12, 426
BspTI CTTAAG 1 cut(s) 830
BspTNI GGTCTC 4 cut(s) 297, 894, 1485, 1764
BsrDI GCAATG 1 cut(s) 1094
BsrFI RCCGGY 1 cut(s) 2429
BsrGI TGTACA 1 cut(s) 2178
BsrI ACTGG 6 cut(s) 178, 280, 514, 1970, 2370, 2858
BssAI RCCGGY 1 cut(s) 2429
BssECI CCNNGG 5 cut(s) 1391, 1564, 1565, 2212, 2695
BssMI GATC 9 cut(s) 904, 933, 1203, 1497, 1714, 1927, 2009, 2158, 2335
BssNAI GTATAC 1 cut(s) 2105
BssT1I CCWWGG 2 cut(s) 2212, 2695
Bst1107I GTATAC 1 cut(s) 2105
Bst2UI CCWGG 1 cut(s) 1566
Bst6I CTCTTC 3 cut(s) 574, 2024, 2623
BstAFI CTTAAG 1 cut(s) 830
BstAPI GCANNNNNTGC 1 cut(s) 152
BstAUI TGTACA 1 cut(s) 2178
BstBAI YACGTR 2 cut(s) 118, 1559
BstC8I GCNNGC 5 cut(s) 144, 1302, 1668, 2033, 2456
BstDEI CTNAG 9 cut(s) 500, 590, 653, 910, 995, 2190, 2595, 2637, 2907
BstDSI CCRYGG 3 cut(s) 1391, 2212, 2695
BstF5I GGATG 3 cut(s) 77, 251, 1602
BstKTI GATC 9 cut(s) 907, 936, 1206, 1500, 1717, 1930, 2012, 2161, 2338
BstMAI GTCTC 6 cut(s) 297, 509, 894, 1485, 1764, 2120
BstMBI GATC 9 cut(s) 904, 933, 1203, 1497, 1714, 1927, 2009, 2158, 2335
BstMWI GCNNNNNNNGC 3 cut(s) 49, 152, 1402
BstNI CCWGG 1 cut(s) 1566
BstNSI RCATGY 1 cut(s) 2035
BstSCI CCNGG 1 cut(s) 1564
BstSFI CTRYAG 1 cut(s) 2459
BstSNI TACGTA 1 cut(s) 1559
BstV1I GCAGC 4 cut(s) 30, 361, 1672, 2445
BstV2I GAAGAC 1 cut(s) 1941
BstX2I RGATCY 2 cut(s) 933, 2158
BstXI CCANNNNNNTGG 2 cut(s) 1088, 1273
BstYI RGATCY 2 cut(s) 933, 2158
BstZ17I GTATAC 1 cut(s) 2105
BsuRI GGCC 2 cut(s) 1666, 2613
BtgI CCRYGG 3 cut(s) 1391, 2212, 2695
BtgZI GCGATG 1 cut(s) 982
BtsCI GGATG 3 cut(s) 77, 251, 1602
BtsI GCAGTG 1 cut(s) 768
Cac8I GCNNGC 5 cut(s) 144, 1302, 1668, 2033, 2456
Cfr10I RCCGGY 1 cut(s) 2429
Cfr13I GGNCC 8 cut(s) 586, 1233, 1598, 1664, 1952, 2195, 2612, 2664
Csp6I GTAC 9 cut(s) 321, 427, 985, 1166, 1556, 1616, 2179, 2310, 2824
CspAI ACCGGT 1 cut(s) 2429
CspCI CAANNNNNGTGG 2 cut(s) 979, 1014
CviAII CATG 9 cut(s) 207, 281, 883, 2032, 2213, 2280, 2501, 2696, 2811
CviQI GTAC 9 cut(s) 321, 427, 985, 1166, 1556, 1616, 2179, 2310, 2824
DdeI CTNAG 9 cut(s) 500, 590, 653, 910, 995, 2190, 2595, 2637, 2907
DpnI GATC 9 cut(s) 906, 935, 1205, 1499, 1716, 1929, 2011, 2160, 2337
DpnII GATC 9 cut(s) 904, 933, 1203, 1497, 1714, 1927, 2009, 2158, 2335
DraI TTTAAA 3 cut(s) 160, 576, 1419
Eam1104I CTCTTC 3 cut(s) 574, 2024, 2623
EarI CTCTTC 3 cut(s) 574, 2024, 2623
Eco105I TACGTA 1 cut(s) 1559
Eco130I CCWWGG 2 cut(s) 2212, 2695
Eco24I GRGCYC 1 cut(s) 2724
Eco31I GGTCTC 4 cut(s) 297, 894, 1485, 1764
Eco32I GATATC 1 cut(s) 1453
Eco47I GGWCC 6 cut(s) 586, 1233, 1598, 1952, 2195, 2664
Eco57I CTGAAG 1 cut(s) 1297
Eco88I CYCGRG 1 cut(s) 2139
EcoO109I RGGNCCY 3 cut(s) 1598, 1952, 2664
EcoRI GAATTC 1 cut(s) 92
EcoRII CCWGG 1 cut(s) 1564
EcoRV GATATC 1 cut(s) 1453
EcoT14I CCWWGG 2 cut(s) 2212, 2695
EcoT22I ATGCAT 2 cut(s) 37, 1630
EcoT38I GRGCYC 1 cut(s) 2724
ErhI CCWWGG 2 cut(s) 2212, 2695
FaeI CATG 9 cut(s) 210, 284, 886, 2035, 2216, 2283, 2504, 2699, 2814
FalI AAGNNNNNCTT 2 cut(s) 135, 167
FatI CATG 9 cut(s) 206, 280, 882, 2031, 2212, 2279, 2500, 2695, 2810
FauI CCCGC 1 cut(s) 945
FauNDI CATATG 2 cut(s) 1633, 2175
FblI GTMKAC 2 cut(s) 258, 2104
Fnu4HI GCNGC 4 cut(s) 44, 350, 1686, 2459
FokI GGATG 3 cut(s) 64, 258, 1589
FriOI GRGCYC 1 cut(s) 2724
Fsp4HI GCNGC 4 cut(s) 44, 350, 1686, 2459
GluI GCNGC 4 cut(s) 44, 350, 1686, 2459
GsuI CTGGAG 1 cut(s) 1758
HaeIII GGCC 2 cut(s) 1666, 2613
HapII CCGG 4 cut(s) 1809, 2097, 2430, 2574
Hin1II CATG 9 cut(s) 210, 284, 886, 2035, 2216, 2283, 2504, 2699, 2814
HincII GTYRAC 1 cut(s) 2355
HindII GTYRAC 1 cut(s) 2355
HindIII AAGCTT 2 cut(s) 746, 1920
HinfI GANTC 8 cut(s) 255, 375, 1075, 1375, 1850, 2365, 2581, 2701
HpaII CCGG 4 cut(s) 1809, 2097, 2430, 2574
HphI GGTGA 4 cut(s) 197, 452, 1070, 1193
Hpy166II GTNNAC 9 cut(s) 259, 410, 637, 860, 916, 1001, 2105, 2355, 2648
Hpy188I TCNGA 7 cut(s) 106, 374, 1012, 1243, 1450, 2406, 2847
Hpy8I GTNNAC 9 cut(s) 259, 410, 637, 860, 916, 1001, 2105, 2355, 2648
HpyAV CCTTC 8 cut(s) 440, 920, 1223, 1466, 1589, 1902, 2015, 2138
HpyCH4IV ACGT 3 cut(s) 117, 612, 1558
HpyF10VI GCNNNNNNNGC 3 cut(s) 49, 152, 1402
HpyF3I CTNAG 9 cut(s) 500, 590, 653, 910, 995, 2190, 2595, 2637, 2907
HpySE526I ACGT 3 cut(s) 117, 612, 1558
Hsp92II CATG 9 cut(s) 210, 284, 886, 2035, 2216, 2283, 2504, 2699, 2814
Kpn2I TCCGGA 3 cut(s) 1808, 2096, 2573
KpnI GGTACC 1 cut(s) 430
Kzo9I GATC 9 cut(s) 904, 933, 1203, 1497, 1714, 1927, 2009, 2158, 2335
LmnI GCTCC 3 cut(s) 384, 648, 2604
Lsp1109I GCAGC 4 cut(s) 30, 361, 1672, 2445
LweI GCATC 3 cut(s) 44, 1426, 1637
MaeII ACGT 3 cut(s) 117, 612, 1558
MaeIII GTNAC 8 cut(s) 185, 283, 515, 1559, 1697, 1793, 2037, 2372
MalI GATC 9 cut(s) 906, 935, 1205, 1499, 1716, 1929, 2011, 2160, 2337
MboI GATC 9 cut(s) 904, 933, 1203, 1497, 1714, 1927, 2009, 2158, 2335
MfeI CAATTG 2 cut(s) 550, 1340
MflI RGATCY 2 cut(s) 933, 2158
MhlI GDGCHC 2 cut(s) 1042, 2724
MlyI GAGTC 3 cut(s) 264, 1384, 1859
MmeI TCCRAC 3 cut(s) 1176, 1562, 2608
Mph1103I ATGCAT 2 cut(s) 37, 1630
MroI TCCGGA 3 cut(s) 1808, 2096, 2573
MroXI GAANNNNTTC 1 cut(s) 363
MslI CAYNNNNRTG 4 cut(s) 105, 438, 1427, 2044
MspCI CTTAAG 1 cut(s) 830
MspI CCGG 4 cut(s) 1809, 2097, 2430, 2574
MspR9I CCNGG 1 cut(s) 1566
MunI CAATTG 2 cut(s) 550, 1340
Mva1269I GAATGC 1 cut(s) 769
MvaI CCWGG 1 cut(s) 1566
MwoI GCNNNNNNNGC 3 cut(s) 49, 152, 1402
NcoI CCATGG 2 cut(s) 2212, 2695
NdeI CATATG 2 cut(s) 1633, 2175
NdeII GATC 9 cut(s) 904, 933, 1203, 1497, 1714, 1927, 2009, 2158, 2335
NheI GCTAGC 1 cut(s) 1300
NlaIII CATG 9 cut(s) 210, 284, 886, 2035, 2216, 2283, 2504, 2699, 2814
NlaIV GGNNCC 9 cut(s) 14, 386, 428, 935, 1234, 1329, 1600, 2196, 2614
NmeAIII GCCGAG 1 cut(s) 585
NmuCI GTSAC 4 cut(s) 185, 1697, 2037, 2372
NsiI ATGCAT 2 cut(s) 37, 1630
NspI RCATGY 1 cut(s) 2035
PaeI GCATGC 1 cut(s) 2035
PaeR7I CTCGAG 1 cut(s) 2139
PasI CCCWGGG 1 cut(s) 1565
PctI GAATGC 1 cut(s) 769
PdmI GAANNNNTTC 1 cut(s) 363
PfeI GAWTC 5 cut(s) 375, 1075, 2365, 2581, 2701
PflMI CCANNNNNTGG 2 cut(s) 2218, 2280
PinAI ACCGGT 1 cut(s) 2429
PkrI GCNGC 4 cut(s) 45, 351, 1687, 2460
PleI GAGTC 3 cut(s) 263, 1383, 1858
PpsI GAGTC 3 cut(s) 263, 1383, 1858
Ppu21I YACGTR 2 cut(s) 118, 1559
PpuMI RGGWCCY 3 cut(s) 1598, 1952, 2664
PshBI ATTAAT 1 cut(s) 2085
PsiI TTATAA 1 cut(s) 1109
Psp5II RGGWCCY 3 cut(s) 1598, 1952, 2664
Psp6I CCWGG 1 cut(s) 1564
PspGI CCWGG 1 cut(s) 1564
PspN4I GGNNCC 9 cut(s) 14, 386, 428, 935, 1234, 1329, 1600, 2196, 2614
PspPI GGNCC 8 cut(s) 586, 1233, 1598, 1664, 1952, 2195, 2612, 2664
PspPPI RGGWCCY 3 cut(s) 1598, 1952, 2664
PstI CTGCAG 1 cut(s) 2463
PsuI RGATCY 2 cut(s) 933, 2158
RsaI GTAC 9 cut(s) 322, 428, 986, 1167, 1557, 1617, 2180, 2311, 2825
RsaNI GTAC 9 cut(s) 321, 427, 985, 1166, 1556, 1616, 2179, 2310, 2824
RseI CAYNNNNRTG 4 cut(s) 105, 438, 1427, 2044
SatI GCNGC 4 cut(s) 44, 350, 1686, 2459
Sau3AI GATC 9 cut(s) 904, 933, 1203, 1497, 1714, 1927, 2009, 2158, 2335
Sau96I GGNCC 8 cut(s) 586, 1233, 1598, 1664, 1952, 2195, 2612, 2664
ScaI AGTACT 2 cut(s) 1617, 2311
SchI GAGTC 3 cut(s) 264, 1384, 1859
ScrFI CCNGG 1 cut(s) 1566
SduI GDGCHC 2 cut(s) 1042, 2724
SfaNI GCATC 3 cut(s) 44, 1426, 1637
SfcI CTRYAG 1 cut(s) 2459
Sfr274I CTCGAG 1 cut(s) 2139
SinI GGWCC 6 cut(s) 586, 1233, 1598, 1952, 2195, 2664
SlaI CTCGAG 1 cut(s) 2139
SmiMI CAYNNNNRTG 4 cut(s) 105, 438, 1427, 2044
SmlI CTYRAG 6 cut(s) 830, 1124, 1141, 1720, 2139, 2657
SmoI CTYRAG 6 cut(s) 830, 1124, 1141, 1720, 2139, 2657
SnaBI TACGTA 1 cut(s) 1559
SphI GCATGC 1 cut(s) 2035
SsiI CCGC 3 cut(s) 183, 243, 938
SspI AATATT 3 cut(s) 70, 1007, 1026
StyD4I CCNGG 1 cut(s) 1564
StyI CCWWGG 2 cut(s) 2212, 2695
TaiI ACGT 3 cut(s) 120, 615, 1561
TaqI TCGA 9 cut(s) 1031, 1042, 1206, 1434, 1500, 1548, 2008, 2140, 2414
TatI WGTACW 3 cut(s) 1615, 2178, 2309
TfiI GAWTC 5 cut(s) 375, 1075, 2365, 2581, 2701
TseFI GTSAC 4 cut(s) 185, 1697, 2037, 2372
TseI GCWGC 4 cut(s) 43, 349, 1685, 2458
Tsp45I GTSAC 4 cut(s) 185, 1697, 2037, 2372
TspDTI ATGAA 9 cut(s) 284, 356, 391, 422, 740, 1791, 2274, 2280, 2372
TspGWI ACGGA 1 cut(s) 1380
Van91I CCANNNNNTGG 2 cut(s) 2218, 2280
Vha464I CTTAAG 1 cut(s) 830
VpaK11BI GGWCC 6 cut(s) 586, 1233, 1598, 1952, 2195, 2664
VspI ATTAAT 1 cut(s) 2085
XbaI TCTAGA 1 cut(s) 1060
XceI RCATGY 1 cut(s) 2035
XcmI CCANNNNNNNNNTGG 1 cut(s) 1467
XhoI CTCGAG 1 cut(s) 2139
XmiI GTMKAC 2 cut(s) 258, 2104
XmnI GAANNNNTTC 1 cut(s) 363
ZrmI AGTACT 2 cut(s) 1617, 2311
Zsp2I ATGCAT 2 cut(s) 37, 1630
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.