RchiOBHm_Chr1g0354981

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
Physical Location & Seq
Reverse (-)
47765356 .. 47766024
669 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ58049

Sequence Viewer

Length: 669 bp
ATGGATCTTGTCCAGAGTTATGATGATGAAGTGTCCTTGATATGGAAAGGAGCAATGTCCAAATACAAAAGTACTCTGGGACTTCTGAAGATTGTTGATCTCGCTAGCAACAGATTAAGTGGAGAGATTCCAAGTGAAATTGCTCAACTTTCTGGTTTGGTTTCTTTAAATTTGTCGAGAAACCAATTGACAGGCCAAATAACTCCAGAGATTGGAAAGTTGCAGTCGTTAGATTCTCTTGATATTTCCAGAAACCAGATAGATGGTGCAATTCCAACAAGCCTTGCTCAGATTGATCGACTTGCTTACTTGGACCTGGCATATAACAATTTGTCTAGCAAAATTCCAACTGGTACGCAGCTCCAAACCTTTGAAGCAGCTTTTGTGGGAAACCCTCAACTCTGTGGACCTCCACTACATTCGTGTTCTCAAGAAGAAGCAAGTCCAGTGAAAGCAAACTTGGAGAATCAAGAAGATAAGAAAGAGGTAATGTCGACACTGGGAGATTACACCAGCATGGTGCTTGGGTTTGTCGTTGGATTTTGGGGTGCTTGTGGCAGCTTGATCTTCATCAGGCCATTGAGATATGCATACTTTGACTTCTTCAAAGCTTTGGGTGATTGGTTCTCTCTGAGCCTAGCTTTGATCAGACGGTGGGCAATGAAATAA

Protein Analysis

222

Amino Acids

24.46

Weight (kDa)

5.07

Isoelectric Point (pI)

40.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 26 - 124 4e-07 Leucine-rich repeat region
LRR_8 PF13855 73 - 111 7.6e-06 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000028)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g45420 FvH4_4g14031 FvH4_5g20780 FvH4_6g28530 FvH4_7g14020 FvH4_7g14030 FvH4_7g14040 FvH4_7g14050 FvH4_7g14060 FvH4_7g14070 FvH4_7g14090 FvH4_7g14110 FvH4_7g14140 FvH4_7g14450
malus_domestica MD00G1189100.v1.1 MD01G1018600.v1.1 MD01G1053800.v1.1 MD01G1053900.v1.1 MD01G1054000.v1.1 MD01G1054100.v1.1 MD01G1056700.v1.1 MD01G1057000.v1.1 MD01G1057300.v1.1 MD01G1057400.v1.1 MD01G1061600.v1.1 MD01G1061800.v1.1 MD01G1061900.v1.1 MD01G1062000.v1.1 MD01G1062400.v1.1 MD01G1062500.v1.1 MD01G1063200.v1.1 MD01G1063300.v1.1 MD01G1063400.v1.1 MD01G1063700.v1.1 MD01G1063900.v1.1 MD01G1064200.v1.1 MD01G1064300.v1.1 MD01G1064400.v1.1 MD01G1064600.v1.1 MD01G1064700.v1.1 MD01G1181100.v1.1 MD01G1212300.v1.1 MD01G1212500.v1.1 MD01G1212600.v1.1 MD02G1271900.v1.1 MD07G1136500.v1.1 MD07G1139300.v1.1 MD07G1141200.v1.1 MD07G1144700.v1.1 MD08G1144200.v1.1 MD14G1186300.v1.1 MD14G1186500.v1.1 MD14G1186700.v1.1 MD14G1186800.v1.1 MD15G1351300.v1.1 MD15G1439500.v1.1
prunus_persica Prupe.1G067000_v2.0.a1 Prupe.2G077400_v2.0.a1 Prupe.2G077700_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078600_v2.0.a1 Prupe.2G078800_v2.0.a1 Prupe.2G099600_v2.0.a1 Prupe.2G099700_v2.0.a1 Prupe.2G155100_v2.0.a1 Prupe.2G155500_v2.0.a1 Prupe.2G155600_v2.0.a1 Prupe.2G155800_v2.0.a1 Prupe.2G155900_v2.0.a1 Prupe.2G156100_v2.0.a1 Prupe.2G166100_v2.0.a1 Prupe.2G166300_v2.0.a1 Prupe.2G167500_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G168400_v2.0.a1 Prupe.2G168700_v2.0.a1 Prupe.2G168800_v2.0.a1 Prupe.2G169000_v2.0.a1 Prupe.2G169100_v2.0.a1 Prupe.2G169200_v2.0.a1 Prupe.2G169500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G172300_v2.0.a1 Prupe.2G304800_v2.0.a1 Prupe.4G264800_v2.0.a1 Prupe.4G265000_v2.0.a1 Prupe.5G051900_v2.0.a1 Prupe.5G052000_v2.0.a1
pyrus_communis pycom01g08380 pycom01g08430 pycom01g08490 pycom01g08520 pycom01g08540 pycom01g08550 pycom01g08600 pycom01g08630 pycom01g08660 pycom01g08720 pycom01g09180 pycom01g09200 pycom01g09210 pycom01g09270 pycom01g09280 pycom01g09300 pycom01g09380 pycom01g19110 pycom01g22260 pycom01g22310 pycom01g22330 pycom01g22350 pycom01g22360 pycom02g23250 pycom07g13420 pycom07g13670 pycom07g13900 pycom07g13910 pycom07g13960 pycom07g13970 pycom07g25680 pycom11g22830
rosa_chinensis RchiOBHm_Chr0c22g0500431 RchiOBHm_Chr0c22g0500441 RchiOBHm_Chr0c22g0500561 RchiOBHm_Chr0c22g0500571 RchiOBHm_Chr0c22g0500611 RchiOBHm_Chr0c22g0500621 RchiOBHm_Chr0c22g0500631 RchiOBHm_Chr0c22g0500681 RchiOBHm_Chr1g0348221 RchiOBHm_Chr1g0348251 RchiOBHm_Chr1g0352861 RchiOBHm_Chr1g0352871 RchiOBHm_Chr1g0352891 RchiOBHm_Chr1g0352901 RchiOBHm_Chr1g0354671 RchiOBHm_Chr1g0354701 RchiOBHm_Chr1g0354711 RchiOBHm_Chr1g0354751 RchiOBHm_Chr1g0354761 RchiOBHm_Chr1g0354841 RchiOBHm_Chr1g0354851 RchiOBHm_Chr1g0354881 RchiOBHm_Chr1g0354971 RchiOBHm_Chr1g0354981 RchiOBHm_Chr1g0354991 RchiOBHm_Chr1g0355001 RchiOBHm_Chr1g0355011 RchiOBHm_Chr1g0355021 RchiOBHm_Chr1g0355861 RchiOBHm_Chr1g0379671 RchiOBHm_Chr1g0379681 RchiOBHm_Chr2g0096591 RchiOBHm_Chr2g0132821 RchiOBHm_Chr3g0454901 RchiOBHm_Chr3g0472711 RchiOBHm_Chr4g0400791 RchiOBHm_Chr5g0069481 RchiOBHm_Chr5g0069511 RchiOBHm_Chr5g0069551 RchiOBHm_Chr6g0254651 RchiOBHm_Chr6g0259721 RchiOBHm_Chr7g0205911 RchiOBHm_Chr7g0206401 RchiOBHm_Chr7g0206571 RchiOBHm_Chr7g0206581 RchiOBHm_Chr7g0206621 RchiOBHm_Chr7g0206631 RchiOBHm_Chr7g0206641 RchiOBHm_Chr7g0206681 RchiOBHm_Chr7g0206691 RchiOBHm_Chr7g0206751 RchiOBHm_Chr7g0206761 RchiOBHm_Chr7g0206851 RchiOBHm_Chr7g0206911 RchiOBHm_Chr7g0206921 RchiOBHm_Chr7g0207001 RchiOBHm_Chr7g0207011 RchiOBHm_Chr7g0207031 RchiOBHm_Chr7g0207101 RchiOBHm_Chr7g0207161 RchiOBHm_Chr7g0207201 RchiOBHm_Chr7g0207271 RchiOBHm_Chr7g0207301 RchiOBHm_Chr7g0207311 RchiOBHm_Chr7g0207421 RchiOBHm_Chr7g0207481 RchiOBHm_Chr7g0207491 RchiOBHm_Chr7g0207501 RchiOBHm_Chr7g0207521 RchiOBHm_Chr7g0207531 RchiOBHm_Chr7g0207561 RchiOBHm_Chr7g0207571 RchiOBHm_Chr7g0207581 RchiOBHm_Chr7g0207601 RchiOBHm_Chr7g0207621 RchiOBHm_Chr7g0207631 RchiOBHm_Chr7g0207651 RchiOBHm_Chr7g0207661 RchiOBHm_Chr7g0207711 RchiOBHm_Chr7g0207761 RchiOBHm_Chr7g0207801 RchiOBHm_Chr7g0208821 RchiOBHm_Chr7g0208831 RchiOBHm_Chr7g0208841 RchiOBHm_Chr7g0213601 RchiOBHm_Chr7g0215981 RchiOBHm_Chr7g0216021
rosa_laevigata RLG00000003193 RLG00000003194 RLG00000003287 RLG00000003288 RLG00000003289 RLG00000003293 RLG00000003294 RLG00000003295 RLG00000003297 RLG00000003299 RLG00000003301 RLG00000003327 RLG00000003347 RLG00000016653 RLG00000018642 RLG00000018643 RLG00000019285 RLG00000022542 RLG00000026368 RLG00000026371 RLG00000028124 RLG00000028125 RLG00000028183 RLG00000028184 RLG00000028185 RLG00000028188 RLG00000028673 RLG00000029267 RLG00000029325 RLG00000029674 RLG00000032883 RLG00000036055 RLG00000036058 RLG00000036065 RLG00000036068 RLG00000036071 RLG00000036072 RLG00000036075 RLG00000036076
rosa_multiflora Rmu_co8250183.1_g000001 Rmu_co8271981.1_g000001 Rmu_co8410829.1_g000001 Rmu_co8432879.1_g000001 Rmu_co8441941.1_g000001 Rmu_sc0000076.1_g000031 Rmu_sc0000738.1_g000038 Rmu_sc0000848.1_g000003 Rmu_sc0000848.1_g000014 Rmu_sc0000848.1_g000015 Rmu_sc0000848.1_g000016 Rmu_sc0001264.1_g000001 Rmu_sc0002284.1_g000018 Rmu_sc0002356.1_g000011 Rmu_sc0003020.1_g000003 Rmu_sc0003115.1_g000001 Rmu_sc0003115.1_g000002 Rmu_sc0003115.1_g000003 Rmu_sc0003115.1_g000004 Rmu_sc0003115.1_g000005 Rmu_sc0003115.1_g000008 Rmu_sc0003115.1_g000010 Rmu_sc0003115.1_g000011 Rmu_sc0003115.1_g000014 Rmu_sc0003565.1_g000002 Rmu_sc0003652.1_g000013 Rmu_sc0003652.1_g000015 Rmu_sc0003652.1_g000016 Rmu_sc0003652.1_g000019 Rmu_sc0003940.1_g000001 Rmu_sc0003940.1_g000004 Rmu_sc0003940.1_g000009 Rmu_sc0004084.1_g000010 Rmu_sc0004705.1_g000021 Rmu_sc0004972.1_g000007 Rmu_sc0004987.1_g000002 Rmu_sc0004987.1_g000006 Rmu_sc0005065.1_g000018 Rmu_sc0005065.1_g000029 Rmu_sc0005391.1_g000002 Rmu_sc0005633.1_g000003 Rmu_sc0005633.1_g000008 Rmu_sc0006632.1_g000014 Rmu_sc0006632.1_g000018 Rmu_sc0006681.1_g000010 Rmu_sc0006681.1_g000011 Rmu_sc0006733.1_g000003 Rmu_sc0007385.1_g000005 Rmu_sc0007385.1_g000007 Rmu_sc0007385.1_g000009 Rmu_sc0007385.1_g000016 Rmu_sc0007645.1_g000002 Rmu_sc0007645.1_g000003 Rmu_sc0007645.1_g000022 Rmu_sc0007828.1_g000008 Rmu_sc0008509.1_g000003 Rmu_sc0008509.1_g000015 Rmu_sc0008509.1_g000016 Rmu_sc0008509.1_g000020 Rmu_sc0008509.1_g000030 Rmu_sc0008509.1_g000041 Rmu_sc0008756.1_g000001 Rmu_sc0008756.1_g000003 Rmu_sc0013028.1_g000002 Rmu_sc0013028.1_g000003 Rmu_sc0013028.1_g000005 Rmu_sc0013160.1_g000001 Rmu_sc0014454.1_g000009 Rmu_sc0014455.1_g000007 Rmu_sc0014659.1_g000004 Rmu_sc0017798.1_g000002 Rmu_sc0017798.1_g000004 Rmu_sc0029608.1_g000001 Rmu_sc0037861.1_g000001 Rmu_sc0038750.1_g000001 Rmu_sc0042995.1_g000001 Rmu_ssc0000161.1_g000017
rosa_roxburghii Rroxscaffold_1G00009180 Rroxscaffold_1G00009190 Rroxscaffold_1G00011450 Rroxscaffold_1G00011480 Rroxscaffold_2G00111660 Rroxscaffold_2G00113570 Rroxscaffold_2G00122140 Rroxscaffold_3G00243730 Rroxscaffold_3G00245750 Rroxscaffold_3G00245760 Rroxscaffold_3G00250220 Rroxscaffold_3G00251160 Rroxscaffold_3G00251270 Rroxscaffold_3G00251280 Rroxscaffold_3G00251300 Rroxscaffold_3G00251340 Rroxscaffold_3G00251350 Rroxscaffold_3G00251390 Rroxscaffold_3G00251400 Rroxscaffold_3G00251560 Rroxscaffold_3G00251570 Rroxscaffold_3G00251870 Rroxscaffold_3G00252200 Rroxscaffold_3G00252210 Rroxscaffold_4G00279970 Rroxscaffold_4G00299970 Rroxscaffold_4G00300760 Rroxscaffold_4G00300780 Rroxscaffold_4G00300810 Rroxscaffold_4G00300850 Rroxscaffold_4G00307080 Rroxscaffold_4G00307100 Rroxscaffold_4G00313990 Rroxscaffold_6G00405080
rosa_rugosa Rorug01G0193600 Rorug01G0193700 Rorug01G0243800 Rorug01G0244000 Rorug01G0244000 Rorug01G0244400 Rorug01G0414300.1 Rorug01G0414500 Rorug01G0414600 Rorug02G0235600 Rorug02G0307900 Rorug02G0583100 Rorug02G0583200 Rorug02G0583300 Rorug05G0398000 Rorug05G0398100 Rorug05G0398200 Rorug05G0580300 Rorug05G0590300 Rorug06G0116000 Rorug06G0116100 Rorug07G0096800 Rorug07G0097100.1 Rorug07G0097200 Rorug07G0098600 Rorug07G0098600 Rorug07G0098700 Rorug07G0099100 Rorug07G0106100 Rorug07G0106200 Rorug07G0106200 Rorug07G0106300 Rorug07G0157600 Rorug07G0157700 Rorug07G0157700 Rorug07G0157800
rosa_samantha Rh1AG255500 Rh1AG256700 Rh1BG225800 Rh1BG226200 Rh1BG230000 Rh1CG195300 Rh1CG238400 Rh1CG238500 Rh1CG238900 Rh1CG239000 Rh1CG239300 Rh1CG239400 Rh1CG239800 Rh1CG240000 Rh1CG240200 Rh1CG240300 Rh1CG244300 Rh1CG406900 Rh1CG407300 Rh1CG407400 Rh2CG343600 Rh2DG383200 Rh3BG205900 Rh4AG404400 Rh4BG415500 Rh5AG455200 Rh5AG455600 Rh5CG497000 Rh5CG497200 Rh7AG228800 Rh7AG230400 Rh7AG230800 Rh7AG231200 Rh7AG231600 Rh7AG231800 Rh7AG232100 Rh7AG241600 Rh7BG236200 Rh7CG238200 Rh7CG239100 Rh7CG243400 Rh7CG244900
rosa_wichuraiana Rw0G023040 Rw1G017780 Rw1G022320 Rw1G022340 Rw1G022410 Rw1G022420 Rw1G022440 Rw1G022460 Rw1G022490 Rw1G022500 Rw1G022530 Rw1G022550 Rw1G022560 Rw1G022600 Rw1G023060 Rw1G038150 Rw1G038160 Rw2G008210 Rw2G022350 Rw2G029290 Rw4G015050 Rw4G019850 Rw5G024060 Rw5G042460 Rw7G019160 Rw7G019460 Rw7G019690 Rw7G019830 Rw7G019860 Rw7G019880 Rw7G019890 Rw7G019930 Rw7G019990 Rw7G020460 Rw7G025100 Rw7G025120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 212
AccI GTMKAC 1 cut(s) 494
AclWI GGATC 1 cut(s) 12
AcsI RAATTY 2 cut(s) 169, 342
AcuI CTGAAG 1 cut(s) 107
AfaI GTAC 2 cut(s) 73, 355
AfiI CCNNNNNNNGG 2 cut(s) 42, 212
AgsI TTSAA 2 cut(s) 374, 607
AjnI CCWGG 1 cut(s) 315
AjuI GAANNNNNNNTTGG 2 cut(s) 443, 475
AluBI AGCT 5 cut(s) 361, 380, 561, 611, 641
AluI AGCT 5 cut(s) 361, 380, 561, 611, 641
AlwI GGATC 1 cut(s) 12
AoxI GGCC 2 cut(s) 193, 575
ApeKI GCWGC 3 cut(s) 358, 377, 558
ApoI RAATTY 2 cut(s) 169, 342
AspS9I GGNCC 2 cut(s) 313, 407
AsuHPI GGTGA 1 cut(s) 629
AsuNHI GCTAGC 1 cut(s) 104
AvaII GGWCC 2 cut(s) 313, 407
BbvI GCAGC 3 cut(s) 370, 389, 570
BccI CCATC 1 cut(s) 257
BciT130I CCWGG 1 cut(s) 317
BclI TGATCA 1 cut(s) 645
BfaI CTAG 3 cut(s) 105, 336, 638
BisI GCNGC 3 cut(s) 359, 378, 559
BlsI GCNGC 3 cut(s) 360, 379, 560
BmcAI AGTACT 1 cut(s) 73
Bme1390I CCNGG 1 cut(s) 317
Bme18I GGWCC 2 cut(s) 313, 407
BmgT120I GGNCC 2 cut(s) 313, 407
BmrFI CCNGG 1 cut(s) 317
BmrI ACTGGG 1 cut(s) 509
BmtI GCTAGC 1 cut(s) 108
BmuI ACTGGG 1 cut(s) 509
BpmI CTGGAG 1 cut(s) 189
BpuEI CTTGAG 1 cut(s) 414
BsaBI GATNNNNATC 1 cut(s) 569
Bsc4I CCNNNNNNNGG 2 cut(s) 42, 212
Bse1I ACTGG 3 cut(s) 355, 446, 504
Bse3DI GCAATG 2 cut(s) 60, 666
Bse8I GATNNNNATC 1 cut(s) 569
BseBI CCWGG 1 cut(s) 317
BseJI GATNNNNATC 1 cut(s) 569
BseLI CCNNNNNNNGG 2 cut(s) 42, 212
BseMI GCAATG 2 cut(s) 60, 666
BseMII CTCAG 2 cut(s) 302, 623
BseNI ACTGG 3 cut(s) 355, 446, 504
BseXI GCAGC 3 cut(s) 370, 389, 570
BshFI GGCC 2 cut(s) 195, 577
BslFI GGGAC 1 cut(s) 93
BslI CCNNNNNNNGG 2 cut(s) 42, 212
BsmFI GGGAC 1 cut(s) 93
BsnI GGCC 2 cut(s) 195, 577
Bsp143I GATC 5 cut(s) 4, 97, 295, 564, 645
BspANI GGCC 2 cut(s) 195, 577
BspCNI CTCAG 2 cut(s) 301, 624
BspOI GCTAGC 1 cut(s) 108
BspPI GGATC 1 cut(s) 12
BsrDI GCAATG 2 cut(s) 60, 666
BsrI ACTGG 3 cut(s) 355, 446, 504
BssMI GATC 5 cut(s) 4, 97, 295, 564, 645
Bst2UI CCWGG 1 cut(s) 317
Bst4CI ACNGT 1 cut(s) 654
BstC8I GCNNGC 1 cut(s) 106
BstDEI CTNAG 2 cut(s) 288, 632
BstKTI GATC 5 cut(s) 7, 100, 298, 567, 648
BstMBI GATC 5 cut(s) 4, 97, 295, 564, 645
BstNI CCWGG 1 cut(s) 317
BstSCI CCNGG 1 cut(s) 315
BstV1I GCAGC 3 cut(s) 370, 389, 570
BstX2I RGATCY 1 cut(s) 4
BstXI CCANNNNNNTGG 1 cut(s) 263
BstYI RGATCY 1 cut(s) 4
BsuRI GGCC 2 cut(s) 195, 577
BtsIMutI CAGTG 2 cut(s) 453, 497
Cac8I GCNNGC 1 cut(s) 106
Cfr13I GGNCC 2 cut(s) 313, 407
Csp6I GTAC 2 cut(s) 72, 354
CviAII CATG 1 cut(s) 517
CviJI RGCY 9 cut(s) 195, 282, 361, 380, 561, 577, 611, 636, 641
CviKI_1 RGCY 9 cut(s) 195, 282, 361, 380, 561, 577, 611, 636, 641
CviQI GTAC 2 cut(s) 72, 354
DdeI CTNAG 2 cut(s) 288, 632
DpnI GATC 5 cut(s) 6, 99, 297, 566, 647
DpnII GATC 5 cut(s) 4, 97, 295, 564, 645
DraI TTTAAA 1 cut(s) 168
Eco47I GGWCC 2 cut(s) 313, 407
Eco57I CTGAAG 1 cut(s) 107
EcoRII CCWGG 1 cut(s) 315
EcoT22I ATGCAT 1 cut(s) 592
FaeI CATG 1 cut(s) 520
FaiI YATR 7 cut(s) 21, 43, 322, 324, 518, 588, 592
FaqI GGGAC 1 cut(s) 93
FatI CATG 1 cut(s) 516
FbaI TGATCA 1 cut(s) 645
FblI GTMKAC 1 cut(s) 494
Fnu4HI GCNGC 3 cut(s) 359, 378, 559
Fsp4HI GCNGC 3 cut(s) 359, 378, 559
FspBI CTAG 3 cut(s) 105, 336, 638
GluI GCNGC 3 cut(s) 359, 378, 559
GsuI CTGGAG 1 cut(s) 189
HaeIII GGCC 2 cut(s) 195, 577
Hin1II CATG 1 cut(s) 520
HincII GTYRAC 1 cut(s) 495
HindII GTYRAC 1 cut(s) 495
HindIII AAGCTT 1 cut(s) 609
HinfI GANTC 3 cut(s) 127, 233, 466
HphI GGTGA 1 cut(s) 629
Hpy166II GTNNAC 2 cut(s) 407, 495
Hpy188I TCNGA 4 cut(s) 87, 291, 633, 650
Hpy188III TCNNGA 7 cut(s) 13, 177, 206, 239, 249, 431, 470
Hpy8I GTNNAC 2 cut(s) 407, 495
HpyCH4III ACNGT 1 cut(s) 654
HpyCH4V TGCA 3 cut(s) 223, 269, 590
HpyF3I CTNAG 2 cut(s) 288, 632
Hsp92II CATG 1 cut(s) 520
Ksp22I TGATCA 1 cut(s) 645
Kzo9I GATC 5 cut(s) 4, 97, 295, 564, 645
LmnI GCTCC 2 cut(s) 50, 366
Lsp1109I GCAGC 3 cut(s) 370, 389, 570
MaeI CTAG 3 cut(s) 105, 336, 638
MalI GATC 5 cut(s) 6, 99, 297, 566, 647
MboI GATC 5 cut(s) 4, 97, 295, 564, 645
MboII GAAGA 5 cut(s) 100, 446, 485, 559, 595
MfeI CAATTG 1 cut(s) 185
MflI RGATCY 1 cut(s) 4
MluCI AATT 6 cut(s) 138, 169, 185, 270, 328, 342
MmeI TCCRAC 3 cut(s) 299, 371, 517
MnlI CCTC 3 cut(s) 405, 420, 478
Mph1103I ATGCAT 1 cut(s) 592
MseI TTAA 2 cut(s) 116, 167
MslI CAYNNNNRTG 1 cut(s) 515
MspR9I CCNGG 1 cut(s) 317
MunI CAATTG 1 cut(s) 185
MvaI CCWGG 1 cut(s) 317
NdeII GATC 5 cut(s) 4, 97, 295, 564, 645
NheI GCTAGC 1 cut(s) 104
NlaIII CATG 1 cut(s) 520
NsiI ATGCAT 1 cut(s) 592
PfeI GAWTC 3 cut(s) 127, 233, 466
PflMI CCANNNNNTGG 1 cut(s) 212
PkrI GCNGC 3 cut(s) 360, 379, 560
Psp6I CCWGG 1 cut(s) 315
PspGI CCWGG 1 cut(s) 315
PspPI GGNCC 2 cut(s) 313, 407
PsuI RGATCY 1 cut(s) 4
RsaI GTAC 2 cut(s) 73, 355
RsaNI GTAC 2 cut(s) 72, 354
RseI CAYNNNNRTG 1 cut(s) 515
SalI GTCGAC 1 cut(s) 493
SaqAI TTAA 2 cut(s) 116, 167
SatI GCNGC 3 cut(s) 359, 378, 559
Sau3AI GATC 5 cut(s) 4, 97, 295, 564, 645
Sau96I GGNCC 2 cut(s) 313, 407
ScaI AGTACT 1 cut(s) 73
ScrFI CCNGG 1 cut(s) 317
SetI ASST 9 cut(s) 318, 363, 371, 382, 412, 489, 563, 613, 643
SinI GGWCC 2 cut(s) 313, 407
SmiMI CAYNNNNRTG 1 cut(s) 515
SmlI CTYRAG 1 cut(s) 429
SmoI CTYRAG 1 cut(s) 429
Sse9I AATT 6 cut(s) 138, 169, 185, 270, 328, 342
SspMI CTAG 3 cut(s) 105, 336, 638
StyD4I CCNGG 1 cut(s) 315
TaaI ACNGT 1 cut(s) 654
TaqI TCGA 3 cut(s) 176, 298, 494
TasI AATT 6 cut(s) 138, 169, 185, 270, 328, 342
TatI WGTACW 1 cut(s) 71
TfiI GAWTC 3 cut(s) 127, 233, 466
Tru1I TTAA 2 cut(s) 116, 167
Tru9I TTAA 2 cut(s) 116, 167
TscAI CASTG 2 cut(s) 453, 504
TseI GCWGC 3 cut(s) 358, 377, 558
TspDTI ATGAA 2 cut(s) 42, 559
TspRI CASTG 2 cut(s) 453, 504
Van91I CCANNNNNTGG 1 cut(s) 212
VpaK11BI GGWCC 2 cut(s) 313, 407
XapI RAATTY 2 cut(s) 169, 342
XmiI GTMKAC 1 cut(s) 494
XspI CTAG 3 cut(s) 105, 336, 638
ZrmI AGTACT 1 cut(s) 73
Zsp2I ATGCAT 1 cut(s) 592
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.