MD01G1061800.v1.1

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr01
Physical Location & Seq
Forward (+)
16597651 .. 16601367
3717 bp
Loading structure...
UTR
Exon/CDS
Intron
MD01G1061800.v1.1.491

Sequence Viewer

Length: 2400 bp
ATGATGAATCCTAAACTCATTGAGTTGCAGCATTTGAAATATTTGGACCTTTCGTGGATAAACTTCAATGGGATCCGACTTCCAGATTTCATTGGTTCCCTTTCCAGTTTAAGATACCTCGATCTCTTTAGTGCTTCTTTTGGTGGTCAATTTCCAAGTCAAGTTGGAAACCTTACCCACTTGCAACATCTTGATCTCAGCTTCAATCACTTTGCTAATGTAGTAAATCTCAATTCATGGCTACCTCATCTTTCTTCTTTAACATATTTGGATCTGAGTTACAACAATCTTAGTAATGTTCCTGACTGGTTGGAAATAGTTAGTAAGCTCCCCAAACTTACAAACTTGACACTGTTAAATTGCAGTCTTCCTTCTCCTGCAATTCATTCCAGTACTCTTTTTAACATAAATTCGTCTAGATCTCTTGCTCATGTTGACCTTAGTTCCAACGAACTCACTTCTTCCATATTTCGTTGGTTGTCCAAATACAATGCCAGTCTTGGTCATCTTGACATGTCTTTCAACCAATTAACTGGCTTATTTCCCGATGTCATTGGAAACATGAGCTCTCTTACATATCTAGATCTCTCTTTTAACCAATTTGAAGGGGTGATTTCAGAAAGTCATTTCTCGGGTCTCTCCAGATTAAGATGTTTTGGTTTGTCCTCGGCCTCACTAACTTTAAACTTCCATTCTAAATGGGTTCCCCCTTTCCAATTGGATTTCATATTCTTGGGGTCTTGCAAGATGGGCCCACATTTTCCAAATTGGCTTCAAACTCAAAGAAGTTATTCAGTCCTTGATATTTCTAATGCAGGAATATCTGATACCCTTCCAAGTTGGTTTTGGGAAAGGCTGTCTCATCATAATGAAATTGATTTTGTAGATCTCTCCAACAATCAAATTAGGGGAACAATTCCAAACTCGCAAATCGATTTTTTATATTACCCTCGTCTACTAAATTTGAGTTGGAACCAATTGGAAGGTCAAGTCCCTCCATTCCTATTAAAAGCGTCATCTCTTGATCTGTCCCACAATAATTTTTCAGGGTCTTTTTCTTTCTTGTTTCCAATGAAGGCAAGTAACTTAACGTTGCTTGATCTCTCGAGCAACCATTTAGACGGACAACTTCCCGATTGCTGGACTCATTTCAAAAATCTTTTAATTCTTGATTTGAGTGACAACCATTTTTCGGGGAGAATTCCTACCACAATGGGCTCTTTATTTTCTATTCAAACATTGAACCTAAACAATAATGGATTTGTGGGGGAATTGCCTTCATCCTTGAACAATTGTTCAAGCCTAGTAGTTTTTGATGTTGCAAATAATAACTTATCAGGGCCGATACCTGAATGGTTAAGGTATGGACTTCCAAATTTGACTATCCTTATACTTCGTTTGAATCACTTCTATGGAAGCATTCCGTTACAAATGTGTAATATGAGAAGCATTCAAATTTTGGATTTCTCGATGAACAATATCTCCGGAAGTATACCCAAATGCCTCAACAATTTGACTAATTTGGCTATAAGAGGAAGTTCAAGTCTAACTATCACTCGTACCATTTATGTAAACTCCCATACTATCACTGGTTATAGTTATGATGACGAAGCATCCTTGATATGGAAAGGCATGATGTCCAAATACAAAAGCATTCTAGGGCTTGTAAAGAGTATTCATCTGTCCAGTAACCGATTAACAGGAGAGATTCCTTGTGAAATCACTGATCTTGTGGGGTTGGTTTCTTTAAACCTATCAAGAAACAACTTAACAGGTCAAATAACTCCAAATATCGGGAAGTTGCAGTCTTTAGATTTGCTTGATTTGTCAAACAACCAAATACATGGTACAATTCCAACAAGTCTCTTTGGAATATCTGGCCTTGGTATGTTGGACTTGTCCAACAACAACCTGTCTGGAAAAATTCCCATAGGATCTCAGCTTCAAATTTATGAGCCCTCTGTTTTTGCCGGAAATCCTCTCCTTTGTGGAATTCCACTTCAGACATGCTCTTCTGAGGAAACAACTCCAGAGGAGCAGCCGGTGGTTGGGAATCAGGATGAAGATAATGATGGGTTTATAACTCCGGGATTTTACGTGAGTTTGGGGCTTGGATTTGTTGTTGGATTCTGGGGAGTTTGTGGGAGTTCGATATTCAATAGGTTATGGAGATACACATACTTCAAGCTCTTGAATGGTTTAAATGATTGGCTTTATGTCGGGCTCGTTCATCGTCTTGTTTGCTACTTCATGCTAACCCTTTCGGCTTTCGGTTTGAGGAGGAGCCTGAAGGAGAAGAAGAATGCAATAACTTTTAGGTTATGGGGGAAGAGATTTTACAGATTGAAGAGCTCTACTGTTACTTGTAACAATAAGTTGGAATTTCTCCAAATACATTAG

Protein Analysis

800

Amino Acids

89.52

Weight (kDa)

6.53

Isoelectric Point (pI)

35.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 7 - 230 1.3e-14 Leucine-rich repeat region
LRR_Zer-1 PF25013 7 - 99 7e-06 Zer-1-like, Leucine-rich repeats
LRR_8 PF13855 140 - 201 7.7e-08 Leucine rich repeat
LRR_8 PF13855 167 - 223 7.5e-08 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000028)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g45420 FvH4_4g14031 FvH4_5g20780 FvH4_6g28530 FvH4_7g14020 FvH4_7g14030 FvH4_7g14040 FvH4_7g14050 FvH4_7g14060 FvH4_7g14070 FvH4_7g14090 FvH4_7g14110 FvH4_7g14140 FvH4_7g14450
malus_domestica MD00G1189100.v1.1 MD01G1018600.v1.1 MD01G1053800.v1.1 MD01G1053900.v1.1 MD01G1054000.v1.1 MD01G1054100.v1.1 MD01G1056700.v1.1 MD01G1057000.v1.1 MD01G1057300.v1.1 MD01G1057400.v1.1 MD01G1061600.v1.1 MD01G1061800.v1.1 MD01G1061900.v1.1 MD01G1062000.v1.1 MD01G1062400.v1.1 MD01G1062500.v1.1 MD01G1063200.v1.1 MD01G1063300.v1.1 MD01G1063400.v1.1 MD01G1063700.v1.1 MD01G1063900.v1.1 MD01G1064200.v1.1 MD01G1064300.v1.1 MD01G1064400.v1.1 MD01G1064600.v1.1 MD01G1064700.v1.1 MD01G1181100.v1.1 MD01G1212300.v1.1 MD01G1212500.v1.1 MD01G1212600.v1.1 MD02G1271900.v1.1 MD07G1136500.v1.1 MD07G1139300.v1.1 MD07G1141200.v1.1 MD07G1144700.v1.1 MD08G1144200.v1.1 MD14G1186300.v1.1 MD14G1186500.v1.1 MD14G1186700.v1.1 MD14G1186800.v1.1 MD15G1351300.v1.1 MD15G1439500.v1.1
prunus_persica Prupe.1G067000_v2.0.a1 Prupe.2G077400_v2.0.a1 Prupe.2G077700_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078600_v2.0.a1 Prupe.2G078800_v2.0.a1 Prupe.2G099600_v2.0.a1 Prupe.2G099700_v2.0.a1 Prupe.2G155100_v2.0.a1 Prupe.2G155500_v2.0.a1 Prupe.2G155600_v2.0.a1 Prupe.2G155800_v2.0.a1 Prupe.2G155900_v2.0.a1 Prupe.2G156100_v2.0.a1 Prupe.2G166100_v2.0.a1 Prupe.2G166300_v2.0.a1 Prupe.2G167500_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G168400_v2.0.a1 Prupe.2G168700_v2.0.a1 Prupe.2G168800_v2.0.a1 Prupe.2G169000_v2.0.a1 Prupe.2G169100_v2.0.a1 Prupe.2G169200_v2.0.a1 Prupe.2G169500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G172300_v2.0.a1 Prupe.2G304800_v2.0.a1 Prupe.4G264800_v2.0.a1 Prupe.4G265000_v2.0.a1 Prupe.5G051900_v2.0.a1 Prupe.5G052000_v2.0.a1
pyrus_communis pycom01g08380 pycom01g08430 pycom01g08490 pycom01g08520 pycom01g08540 pycom01g08550 pycom01g08600 pycom01g08630 pycom01g08660 pycom01g08720 pycom01g09180 pycom01g09200 pycom01g09210 pycom01g09270 pycom01g09280 pycom01g09300 pycom01g09380 pycom01g19110 pycom01g22260 pycom01g22310 pycom01g22330 pycom01g22350 pycom01g22360 pycom02g23250 pycom07g13420 pycom07g13670 pycom07g13900 pycom07g13910 pycom07g13960 pycom07g13970 pycom07g25680 pycom11g22830
rosa_chinensis RchiOBHm_Chr0c22g0500431 RchiOBHm_Chr0c22g0500441 RchiOBHm_Chr0c22g0500561 RchiOBHm_Chr0c22g0500571 RchiOBHm_Chr0c22g0500611 RchiOBHm_Chr0c22g0500621 RchiOBHm_Chr0c22g0500631 RchiOBHm_Chr0c22g0500681 RchiOBHm_Chr1g0348221 RchiOBHm_Chr1g0348251 RchiOBHm_Chr1g0352861 RchiOBHm_Chr1g0352871 RchiOBHm_Chr1g0352891 RchiOBHm_Chr1g0352901 RchiOBHm_Chr1g0354671 RchiOBHm_Chr1g0354701 RchiOBHm_Chr1g0354711 RchiOBHm_Chr1g0354751 RchiOBHm_Chr1g0354761 RchiOBHm_Chr1g0354841 RchiOBHm_Chr1g0354851 RchiOBHm_Chr1g0354881 RchiOBHm_Chr1g0354971 RchiOBHm_Chr1g0354981 RchiOBHm_Chr1g0354991 RchiOBHm_Chr1g0355001 RchiOBHm_Chr1g0355011 RchiOBHm_Chr1g0355021 RchiOBHm_Chr1g0355861 RchiOBHm_Chr1g0379671 RchiOBHm_Chr1g0379681 RchiOBHm_Chr2g0096591 RchiOBHm_Chr2g0132821 RchiOBHm_Chr3g0454901 RchiOBHm_Chr3g0472711 RchiOBHm_Chr4g0400791 RchiOBHm_Chr5g0069481 RchiOBHm_Chr5g0069511 RchiOBHm_Chr5g0069551 RchiOBHm_Chr6g0254651 RchiOBHm_Chr6g0259721 RchiOBHm_Chr7g0205911 RchiOBHm_Chr7g0206401 RchiOBHm_Chr7g0206571 RchiOBHm_Chr7g0206581 RchiOBHm_Chr7g0206621 RchiOBHm_Chr7g0206631 RchiOBHm_Chr7g0206641 RchiOBHm_Chr7g0206681 RchiOBHm_Chr7g0206691 RchiOBHm_Chr7g0206751 RchiOBHm_Chr7g0206761 RchiOBHm_Chr7g0206851 RchiOBHm_Chr7g0206911 RchiOBHm_Chr7g0206921 RchiOBHm_Chr7g0207001 RchiOBHm_Chr7g0207011 RchiOBHm_Chr7g0207031 RchiOBHm_Chr7g0207101 RchiOBHm_Chr7g0207161 RchiOBHm_Chr7g0207201 RchiOBHm_Chr7g0207271 RchiOBHm_Chr7g0207301 RchiOBHm_Chr7g0207311 RchiOBHm_Chr7g0207421 RchiOBHm_Chr7g0207481 RchiOBHm_Chr7g0207491 RchiOBHm_Chr7g0207501 RchiOBHm_Chr7g0207521 RchiOBHm_Chr7g0207531 RchiOBHm_Chr7g0207561 RchiOBHm_Chr7g0207571 RchiOBHm_Chr7g0207581 RchiOBHm_Chr7g0207601 RchiOBHm_Chr7g0207621 RchiOBHm_Chr7g0207631 RchiOBHm_Chr7g0207651 RchiOBHm_Chr7g0207661 RchiOBHm_Chr7g0207711 RchiOBHm_Chr7g0207761 RchiOBHm_Chr7g0207801 RchiOBHm_Chr7g0208821 RchiOBHm_Chr7g0208831 RchiOBHm_Chr7g0208841 RchiOBHm_Chr7g0213601 RchiOBHm_Chr7g0215981 RchiOBHm_Chr7g0216021
rosa_laevigata RLG00000003193 RLG00000003194 RLG00000003287 RLG00000003288 RLG00000003289 RLG00000003293 RLG00000003294 RLG00000003295 RLG00000003297 RLG00000003299 RLG00000003301 RLG00000003327 RLG00000003347 RLG00000016653 RLG00000018642 RLG00000018643 RLG00000019285 RLG00000022542 RLG00000026368 RLG00000026371 RLG00000028124 RLG00000028125 RLG00000028183 RLG00000028184 RLG00000028185 RLG00000028188 RLG00000028673 RLG00000029267 RLG00000029325 RLG00000029674 RLG00000032883 RLG00000036055 RLG00000036058 RLG00000036065 RLG00000036068 RLG00000036071 RLG00000036072 RLG00000036075 RLG00000036076
rosa_multiflora Rmu_co8250183.1_g000001 Rmu_co8271981.1_g000001 Rmu_co8410829.1_g000001 Rmu_co8432879.1_g000001 Rmu_co8441941.1_g000001 Rmu_sc0000076.1_g000031 Rmu_sc0000738.1_g000038 Rmu_sc0000848.1_g000003 Rmu_sc0000848.1_g000014 Rmu_sc0000848.1_g000015 Rmu_sc0000848.1_g000016 Rmu_sc0001264.1_g000001 Rmu_sc0002284.1_g000018 Rmu_sc0002356.1_g000011 Rmu_sc0003020.1_g000003 Rmu_sc0003115.1_g000001 Rmu_sc0003115.1_g000002 Rmu_sc0003115.1_g000003 Rmu_sc0003115.1_g000004 Rmu_sc0003115.1_g000005 Rmu_sc0003115.1_g000008 Rmu_sc0003115.1_g000010 Rmu_sc0003115.1_g000011 Rmu_sc0003115.1_g000014 Rmu_sc0003565.1_g000002 Rmu_sc0003652.1_g000013 Rmu_sc0003652.1_g000015 Rmu_sc0003652.1_g000016 Rmu_sc0003652.1_g000019 Rmu_sc0003940.1_g000001 Rmu_sc0003940.1_g000004 Rmu_sc0003940.1_g000009 Rmu_sc0004084.1_g000010 Rmu_sc0004705.1_g000021 Rmu_sc0004972.1_g000007 Rmu_sc0004987.1_g000002 Rmu_sc0004987.1_g000006 Rmu_sc0005065.1_g000018 Rmu_sc0005065.1_g000029 Rmu_sc0005391.1_g000002 Rmu_sc0005633.1_g000003 Rmu_sc0005633.1_g000008 Rmu_sc0006632.1_g000014 Rmu_sc0006632.1_g000018 Rmu_sc0006681.1_g000010 Rmu_sc0006681.1_g000011 Rmu_sc0006733.1_g000003 Rmu_sc0007385.1_g000005 Rmu_sc0007385.1_g000007 Rmu_sc0007385.1_g000009 Rmu_sc0007385.1_g000016 Rmu_sc0007645.1_g000002 Rmu_sc0007645.1_g000003 Rmu_sc0007645.1_g000022 Rmu_sc0007828.1_g000008 Rmu_sc0008509.1_g000003 Rmu_sc0008509.1_g000015 Rmu_sc0008509.1_g000016 Rmu_sc0008509.1_g000020 Rmu_sc0008509.1_g000030 Rmu_sc0008509.1_g000041 Rmu_sc0008756.1_g000001 Rmu_sc0008756.1_g000003 Rmu_sc0013028.1_g000002 Rmu_sc0013028.1_g000003 Rmu_sc0013028.1_g000005 Rmu_sc0013160.1_g000001 Rmu_sc0014454.1_g000009 Rmu_sc0014455.1_g000007 Rmu_sc0014659.1_g000004 Rmu_sc0017798.1_g000002 Rmu_sc0017798.1_g000004 Rmu_sc0029608.1_g000001 Rmu_sc0037861.1_g000001 Rmu_sc0038750.1_g000001 Rmu_sc0042995.1_g000001 Rmu_ssc0000161.1_g000017
rosa_roxburghii Rroxscaffold_1G00009180 Rroxscaffold_1G00009190 Rroxscaffold_1G00011450 Rroxscaffold_1G00011480 Rroxscaffold_2G00111660 Rroxscaffold_2G00113570 Rroxscaffold_2G00122140 Rroxscaffold_3G00243730 Rroxscaffold_3G00245750 Rroxscaffold_3G00245760 Rroxscaffold_3G00250220 Rroxscaffold_3G00251160 Rroxscaffold_3G00251270 Rroxscaffold_3G00251280 Rroxscaffold_3G00251300 Rroxscaffold_3G00251340 Rroxscaffold_3G00251350 Rroxscaffold_3G00251390 Rroxscaffold_3G00251400 Rroxscaffold_3G00251560 Rroxscaffold_3G00251570 Rroxscaffold_3G00251870 Rroxscaffold_3G00252200 Rroxscaffold_3G00252210 Rroxscaffold_4G00279970 Rroxscaffold_4G00299970 Rroxscaffold_4G00300760 Rroxscaffold_4G00300780 Rroxscaffold_4G00300810 Rroxscaffold_4G00300850 Rroxscaffold_4G00307080 Rroxscaffold_4G00307100 Rroxscaffold_4G00313990 Rroxscaffold_6G00405080
rosa_rugosa Rorug01G0193600 Rorug01G0193700 Rorug01G0243800 Rorug01G0244000 Rorug01G0244000 Rorug01G0244400 Rorug01G0414300.1 Rorug01G0414500 Rorug01G0414600 Rorug02G0235600 Rorug02G0307900 Rorug02G0583100 Rorug02G0583200 Rorug02G0583300 Rorug05G0398000 Rorug05G0398100 Rorug05G0398200 Rorug05G0580300 Rorug05G0590300 Rorug06G0116000 Rorug06G0116100 Rorug07G0096800 Rorug07G0097100.1 Rorug07G0097200 Rorug07G0098600 Rorug07G0098600 Rorug07G0098700 Rorug07G0099100 Rorug07G0106100 Rorug07G0106200 Rorug07G0106200 Rorug07G0106300 Rorug07G0157600 Rorug07G0157700 Rorug07G0157700 Rorug07G0157800
rosa_samantha Rh1AG255500 Rh1AG256700 Rh1BG225800 Rh1BG226200 Rh1BG230000 Rh1CG195300 Rh1CG238400 Rh1CG238500 Rh1CG238900 Rh1CG239000 Rh1CG239300 Rh1CG239400 Rh1CG239800 Rh1CG240000 Rh1CG240200 Rh1CG240300 Rh1CG244300 Rh1CG406900 Rh1CG407300 Rh1CG407400 Rh2CG343600 Rh2DG383200 Rh3BG205900 Rh4AG404400 Rh4BG415500 Rh5AG455200 Rh5AG455600 Rh5CG497000 Rh5CG497200 Rh7AG228800 Rh7AG230400 Rh7AG230800 Rh7AG231200 Rh7AG231600 Rh7AG231800 Rh7AG232100 Rh7AG241600 Rh7BG236200 Rh7CG238200 Rh7CG239100 Rh7CG243400 Rh7CG244900
rosa_wichuraiana Rw0G023040 Rw1G017780 Rw1G022320 Rw1G022340 Rw1G022410 Rw1G022420 Rw1G022440 Rw1G022460 Rw1G022490 Rw1G022500 Rw1G022530 Rw1G022550 Rw1G022560 Rw1G022600 Rw1G023060 Rw1G038150 Rw1G038160 Rw2G008210 Rw2G022350 Rw2G029290 Rw4G015050 Rw4G019850 Rw5G024060 Rw5G042460 Rw7G019160 Rw7G019460 Rw7G019690 Rw7G019830 Rw7G019860 Rw7G019880 Rw7G019890 Rw7G019930 Rw7G019990 Rw7G020460 Rw7G025100 Rw7G025120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2081
AccI GTMKAC 2 cut(s) 955, 1492
AccIII TCCGGA 1 cut(s) 1484
AclI AACGTT 1 cut(s) 1091
AclWI GGATC 4 cut(s) 67, 80, 279, 1942
AcsI RAATTY 9 cut(s) 409, 961, 1200, 1375, 1455, 1923, 1947, 1992, 2381
AcuI CTGAAG 2 cut(s) 1985, 2309
AfaI GTAC 3 cut(s) 394, 1561, 1849
AfiI CCNNNNNNNGG 5 cut(s) 1140, 1192, 1623, 1793, 2048
AflIII ACRYGT 1 cut(s) 513
AloI GAACNNNNNNTCC 2 cut(s) 1466, 1498
AluBI AGCT 6 cut(s) 201, 328, 567, 1942, 2188, 2352
AluI AGCT 6 cut(s) 201, 328, 567, 1942, 2188, 2352
Alw21I GWGCWC 2 cut(s) 569, 2354
Alw26I GTCTC 3 cut(s) 641, 864, 1868
AlwI GGATC 4 cut(s) 67, 80, 279, 1942
Ama87I CYCGRG 2 cut(s) 631, 1105
Aor13HI TCCGGA 1 cut(s) 1484
AoxI GGCC 4 cut(s) 669, 751, 1340, 1879
ApaI GGGCCC 1 cut(s) 755
ApeKI GCWGC 2 cut(s) 28, 2038
ApoI RAATTY 9 cut(s) 409, 961, 1200, 1375, 1455, 1923, 1947, 1992, 2381
Asp700I GAANNNNTTC 2 cut(s) 790, 1406
AspS9I GGNCC 4 cut(s) 46, 751, 752, 1340
AsuC2I CCSGG 1 cut(s) 2088
AsuHPI GGTGA 1 cut(s) 622
AvaI CYCGRG 2 cut(s) 631, 1105
AvaII GGWCC 1 cut(s) 46
BaeGI GKGCMC 1 cut(s) 755
BamHI GGATCC 1 cut(s) 72
BanII GRGCYC 6 cut(s) 569, 755, 1220, 1959, 2226, 2354
BarI GAAGNNNNNNTAC 2 cut(s) 2321, 2353
BbsI GAAGAC 1 cut(s) 359
Bbv12I GWGCWC 2 cut(s) 569, 2354
BbvI GCAGC 2 cut(s) 40, 2050
BccI CCATC 2 cut(s) 742, 2066
BcnI CCSGG 1 cut(s) 2088
BcoDI GTCTC 3 cut(s) 641, 864, 1868
BfaI CTAG 4 cut(s) 417, 581, 1304, 1658
BglII AGATCT 3 cut(s) 419, 583, 886
BisI GCNGC 2 cut(s) 29, 2039
BlsI GCNGC 2 cut(s) 30, 2040
BmcAI AGTACT 1 cut(s) 394
Bme1390I CCNGG 1 cut(s) 2088
Bme18I GGWCC 1 cut(s) 46
BmeT110I CYCGRG 2 cut(s) 631, 1105
BmgT120I GGNCC 4 cut(s) 46, 751, 752, 1340
BmiI GGNNCC 6 cut(s) 74, 97, 705, 753, 974, 2285
BmrFI CCNGG 1 cut(s) 2088
BmsI GCATC 1 cut(s) 1622
BpiI GAAGAC 1 cut(s) 359
BpmI CTGGAG 2 cut(s) 625, 2013
BpuMI CCSGG 1 cut(s) 2088
Bsa29I ATCGAT 1 cut(s) 933
BsaAI YACGTR 1 cut(s) 2098
BsaI GGTCTC 1 cut(s) 641
BsaJI CCNNGG 2 cut(s) 666, 1882
BsaWI WCCGGW 1 cut(s) 1484
BsaXI ACNNNNNCTCC 2 cut(s) 1466, 1496
Bsc4I CCNNNNNNNGG 5 cut(s) 1140, 1192, 1623, 1793, 2048
Bse118I RCCGGY 1 cut(s) 2041
Bse1I ACTGG 7 cut(s) 105, 311, 390, 495, 538, 1594, 1686
BseAI TCCGGA 1 cut(s) 1484
BseCI ATCGAT 1 cut(s) 933
BseDI CCNNGG 2 cut(s) 666, 1882
BseGI GGATG 3 cut(s) 1280, 1613, 2065
BseLI CCNNNNNNNGG 5 cut(s) 1140, 1192, 1623, 1793, 2048
BseMII CTCAG 4 cut(s) 211, 266, 1952, 2007
BseNI ACTGG 7 cut(s) 105, 311, 390, 495, 538, 1594, 1686
BseRI GAGGAG 3 cut(s) 2048, 2293, 2296
BseSI GKGCMC 1 cut(s) 755
BseXI GCAGC 2 cut(s) 40, 2050
BshFI GGCC 4 cut(s) 671, 753, 1342, 1881
BshVI ATCGAT 1 cut(s) 933
BsiHKAI GWGCWC 2 cut(s) 569, 2354
BsiHKCI CYCGRG 2 cut(s) 631, 1105
BsiSI CCGG 4 cut(s) 1485, 1971, 2042, 2087
BslFI GGGAC 2 cut(s) 977, 1015
BslI CCNNNNNNNGG 5 cut(s) 1140, 1192, 1623, 1793, 2048
BsmAI GTCTC 3 cut(s) 641, 864, 1868
BsmFI GGGAC 2 cut(s) 977, 1015
BsmI GAATGC 4 cut(s) 1419, 1449, 1653, 2308
BsnI GGCC 4 cut(s) 671, 753, 1342, 1881
Bso31I GGTCTC 1 cut(s) 641
BsoBI CYCGRG 2 cut(s) 631, 1105
Bsp120I GGGCCC 1 cut(s) 751
Bsp1286I GDGCHC 6 cut(s) 569, 755, 1220, 1959, 2226, 2354
Bsp13I TCCGGA 1 cut(s) 1484
BspANI GGCC 4 cut(s) 671, 753, 1342, 1881
BspCNI CTCAG 4 cut(s) 210, 267, 1951, 2008
BspDI ATCGAT 1 cut(s) 933
BspEI TCCGGA 1 cut(s) 1484
BspLI GGNNCC 6 cut(s) 74, 97, 705, 753, 974, 2285
BspPI GGATC 4 cut(s) 67, 80, 279, 1942
BspQI GCTCTTC 2 cut(s) 2017, 2342
BspTNI GGTCTC 1 cut(s) 641
BsrFI RCCGGY 1 cut(s) 2041
BsrI ACTGG 7 cut(s) 105, 311, 390, 495, 538, 1594, 1686
BssAI RCCGGY 1 cut(s) 2041
BssECI CCNNGG 2 cut(s) 666, 1882
BssNAI GTATAC 1 cut(s) 1493
BssT1I CCWWGG 1 cut(s) 1882
Bst1107I GTATAC 1 cut(s) 1493
Bst4CI ACNGT 2 cut(s) 354, 2359
Bst6I CTCTTC 3 cut(s) 2017, 2324, 2342
BstBAI YACGTR 1 cut(s) 2098
BstDEI CTNAG 6 cut(s) 197, 275, 290, 440, 1938, 2016
BstF5I GGATG 3 cut(s) 1280, 1613, 2065
BstMAI GTCTC 3 cut(s) 641, 864, 1868
BstMWI GCNNNNNNNGC 1 cut(s) 750
BstNSI RCATGY 2 cut(s) 517, 2010
BstSCI CCNGG 1 cut(s) 2086
BstSLI GKGCMC 1 cut(s) 755
BstV1I GCAGC 2 cut(s) 40, 2050
BstV2I GAAGAC 1 cut(s) 359
BstX2I RGATCY 6 cut(s) 72, 271, 419, 583, 886, 1934
BstXI CCANNNNNNTGG 2 cut(s) 533, 1844
BstYI RGATCY 6 cut(s) 72, 271, 419, 583, 886, 1934
BstZ17I GTATAC 1 cut(s) 1493
Bsu15I ATCGAT 1 cut(s) 933
BsuRI GGCC 4 cut(s) 671, 753, 1342, 1881
BsuTUI ATCGAT 1 cut(s) 933
BtsCI GGATG 3 cut(s) 1280, 1613, 2065
BtsIMutI CAGTG 3 cut(s) 350, 1587, 1722
Cfr10I RCCGGY 1 cut(s) 2041
Cfr13I GGNCC 4 cut(s) 46, 751, 752, 1340
ClaI ATCGAT 1 cut(s) 933
CseI GACGC 1 cut(s) 1002
Csp6I GTAC 3 cut(s) 393, 1560, 1848
CviAII CATG 8 cut(s) 237, 431, 514, 562, 1633, 1844, 2007, 2251
CviQI GTAC 3 cut(s) 393, 1560, 1848
DdeI CTNAG 6 cut(s) 197, 275, 290, 440, 1938, 2016
DraI TTTAAA 3 cut(s) 684, 1749, 2202
Eam1104I CTCTTC 3 cut(s) 2017, 2324, 2342
EarI CTCTTC 3 cut(s) 2017, 2324, 2342
Ecl136II GAGCTC 2 cut(s) 567, 2352
Eco130I CCWWGG 1 cut(s) 1882
Eco24I GRGCYC 6 cut(s) 569, 755, 1220, 1959, 2226, 2354
Eco31I GGTCTC 1 cut(s) 641
Eco47I GGWCC 1 cut(s) 46
Eco53kI GAGCTC 2 cut(s) 567, 2352
Eco57I CTGAAG 2 cut(s) 1985, 2309
Eco88I CYCGRG 2 cut(s) 631, 1105
EcoICRI GAGCTC 2 cut(s) 567, 2352
EcoRI GAATTC 2 cut(s) 1200, 1992
EcoT14I CCWWGG 1 cut(s) 1882
EcoT38I GRGCYC 6 cut(s) 569, 755, 1220, 1959, 2226, 2354
ErhI CCWWGG 1 cut(s) 1882
FaeI CATG 8 cut(s) 240, 434, 517, 565, 1636, 1847, 2010, 2254
FaqI GGGAC 2 cut(s) 977, 1015
FatI CATG 8 cut(s) 236, 430, 513, 561, 1632, 1843, 2006, 2250
FblI GTMKAC 2 cut(s) 955, 1492
Fnu4HI GCNGC 2 cut(s) 29, 2039
FokI GGATG 3 cut(s) 1267, 1600, 2072
FriOI GRGCYC 6 cut(s) 569, 755, 1220, 1959, 2226, 2354
Fsp4HI GCNGC 2 cut(s) 29, 2039
FspBI CTAG 4 cut(s) 417, 581, 1304, 1658
GluI GCNGC 2 cut(s) 29, 2039
GsuI CTGGAG 2 cut(s) 625, 2013
HaeIII GGCC 4 cut(s) 671, 753, 1342, 1881
HapII CCGG 4 cut(s) 1485, 1971, 2042, 2087
HgaI GACGC 1 cut(s) 1002
Hin1II CATG 8 cut(s) 240, 434, 517, 565, 1636, 1847, 2010, 2254
HincII GTYRAC 1 cut(s) 436
HindII GTYRAC 1 cut(s) 436
HinfI GANTC 6 cut(s) 7, 1144, 1402, 1708, 2053, 2127
HpaII CCGG 4 cut(s) 1485, 1971, 2042, 2087
HphI GGTGA 1 cut(s) 622
Hpy166II GTNNAC 4 cut(s) 436, 956, 1493, 1573
Hpy188I TCNGA 6 cut(s) 77, 276, 619, 826, 2004, 2017
Hpy8I GTNNAC 4 cut(s) 436, 956, 1493, 1573
HpyAV CCTTC 7 cut(s) 381, 599, 842, 977, 1069, 1287, 2284
HpyCH4III ACNGT 2 cut(s) 354, 2359
HpyCH4IV ACGT 2 cut(s) 1091, 2097
HpyCH4V TGCA 9 cut(s) 28, 184, 363, 380, 744, 815, 1322, 1804, 2306
HpyF10VI GCNNNNNNNGC 1 cut(s) 750
HpyF3I CTNAG 6 cut(s) 197, 275, 290, 440, 1938, 2016
HpySE526I ACGT 2 cut(s) 1091, 2097
Hsp92II CATG 8 cut(s) 240, 434, 517, 565, 1636, 1847, 2010, 2254
Kpn2I TCCGGA 1 cut(s) 1484
LguI GCTCTTC 2 cut(s) 2017, 2342
LmnI GCTCC 3 cut(s) 333, 2035, 2283
Lsp1109I GCAGC 2 cut(s) 40, 2050
LweI GCATC 1 cut(s) 1622
MaeI CTAG 4 cut(s) 417, 581, 1304, 1658
MaeII ACGT 2 cut(s) 1091, 2097
MaeIII GTNAC 7 cut(s) 278, 1082, 1178, 1425, 1688, 2359, 2366
MboII GAAGA 9 cut(s) 246, 359, 453, 2004, 2075, 2308, 2311, 2341, 2359
MfeI CAATTG 3 cut(s) 716, 977, 1291
MflI RGATCY 6 cut(s) 72, 271, 419, 583, 886, 1934
MhlI GDGCHC 6 cut(s) 569, 755, 1220, 1959, 2226, 2354
MlyI GAGTC 1 cut(s) 1138
MroI TCCGGA 1 cut(s) 1484
MroXI GAANNNNTTC 2 cut(s) 790, 1406
MslI CAYNNNNRTG 2 cut(s) 867, 1410
MspI CCGG 4 cut(s) 1485, 1971, 2042, 2087
MspR9I CCNGG 1 cut(s) 2088
MunI CAATTG 3 cut(s) 716, 977, 1291
Mva1269I GAATGC 4 cut(s) 1419, 1449, 1653, 2308
MwoI GCNNNNNNNGC 1 cut(s) 750
NciI CCSGG 1 cut(s) 2088
NlaIII CATG 8 cut(s) 240, 434, 517, 565, 1636, 1847, 2010, 2254
NlaIV GGNNCC 6 cut(s) 74, 97, 705, 753, 974, 2285
NmeAIII GCCGAG 1 cut(s) 647
NmuCI GTSAC 1 cut(s) 1178
NspI RCATGY 2 cut(s) 517, 2010
PaeR7I CTCGAG 1 cut(s) 1105
PciI ACATGT 1 cut(s) 513
PciSI GCTCTTC 2 cut(s) 2017, 2342
PctI GAATGC 4 cut(s) 1419, 1449, 1653, 2308
PdmI GAANNNNTTC 2 cut(s) 790, 1406
PfeI GAWTC 5 cut(s) 7, 1402, 1708, 2053, 2127
PfoI TCCNGGA 1 cut(s) 2086
PkrI GCNGC 2 cut(s) 30, 2040
PleI GAGTC 1 cut(s) 1138
PpsI GAGTC 1 cut(s) 1138
Ppu21I YACGTR 1 cut(s) 2098
PscI ACATGT 1 cut(s) 513
PsiI TTATAA 1 cut(s) 2081
Psp124BI GAGCTC 2 cut(s) 569, 2354
Psp1406I AACGTT 1 cut(s) 1091
PspN4I GGNNCC 6 cut(s) 74, 97, 705, 753, 974, 2285
PspOMI GGGCCC 1 cut(s) 751
PspPI GGNCC 4 cut(s) 46, 751, 752, 1340
PsuI RGATCY 6 cut(s) 72, 271, 419, 583, 886, 1934
RsaI GTAC 3 cut(s) 394, 1561, 1849
RsaNI GTAC 3 cut(s) 393, 1560, 1848
RseI CAYNNNNRTG 2 cut(s) 867, 1410
SacI GAGCTC 2 cut(s) 569, 2354
SapI GCTCTTC 2 cut(s) 2017, 2342
SatI GCNGC 2 cut(s) 29, 2039
Sau96I GGNCC 4 cut(s) 46, 751, 752, 1340
ScaI AGTACT 1 cut(s) 394
SchI GAGTC 1 cut(s) 1138
ScrFI CCNGG 1 cut(s) 2088
SduI GDGCHC 6 cut(s) 569, 755, 1220, 1959, 2226, 2354
SfaNI GCATC 1 cut(s) 1622
Sfr274I CTCGAG 1 cut(s) 1105
SinI GGWCC 1 cut(s) 46
SlaI CTCGAG 1 cut(s) 1105
SmiMI CAYNNNNRTG 2 cut(s) 867, 1410
SmlI CTYRAG 1 cut(s) 1105
SmoI CTYRAG 1 cut(s) 1105
SspI AATATT 1 cut(s) 41
SspMI CTAG 4 cut(s) 417, 581, 1304, 1658
SstI GAGCTC 2 cut(s) 569, 2354
StyD4I CCNGG 1 cut(s) 2086
StyI CCWWGG 1 cut(s) 1882
TaaI ACNGT 2 cut(s) 354, 2359
TaiI ACGT 2 cut(s) 1094, 2100
TaqI TCGA 5 cut(s) 120, 933, 1106, 1469, 2150
TatI WGTACW 1 cut(s) 392
TfiI GAWTC 5 cut(s) 7, 1402, 1708, 2053, 2127
TscAI CASTG 3 cut(s) 357, 1594, 1729
TseFI GTSAC 1 cut(s) 1178
TseI GCWGC 2 cut(s) 28, 2038
Tsp45I GTSAC 1 cut(s) 1178
TspGWI ACGGA 2 cut(s) 1137, 1413
TspRI CASTG 3 cut(s) 357, 1594, 1729
VpaK11BI GGWCC 1 cut(s) 46
XapI RAATTY 9 cut(s) 409, 961, 1200, 1375, 1455, 1923, 1947, 1992, 2381
XbaI TCTAGA 2 cut(s) 416, 580
XceI RCATGY 2 cut(s) 517, 2010
XcmI CCANNNNNNNNNTGG 2 cut(s) 843, 1586
XhoI CTCGAG 1 cut(s) 1105
XmiI GTMKAC 2 cut(s) 955, 1492
XmnI GAANNNNTTC 2 cut(s) 790, 1406
XspI CTAG 4 cut(s) 417, 581, 1304, 1658
ZrmI AGTACT 1 cut(s) 394
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.