RchiOBHm_Chr7g0207801

Leucine Rich repeat

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
OG0000028
Physical Location & Seq
Reverse (-)
25027067 .. 25029874
2808 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ18596

Sequence Viewer

Length: 2808 bp
ATGTTTTTCAGTATAATGAGTGGTGGGTCTATGCATTCTGGTTTGGTTGGGCTTGTGTGCATGGCCATTGCCTCTGCTATTTGTTGTTCTAGTGTTGGAAGCTCCAGCAACATCATGTGCTTGGAGAGTGAAAGGCATGCTCTTCTCCAGTTCAAGCAAGGCTTTGTGGATGAGTCCAATGCTCTTGCTTCTTGGAAAAGTGAGAAAGATTGCTGCAAGTGGAGAGGAATAGCATGCAACAACCAAACAGGTCATGTCACCAGACTTGATTTCTCCTTTAGATATTTCAATTATACAGAAGTTCCTTTAAGAGGTGAAATTAGTCCTTCACTACTTGAATTGCAATATCTAAATTACTTGGACCTCAGTTATAATGATTTTAGAGGAATGATCATTCCCAAGTTCATTGGCTCTTTGAGTCAATTGAAAGAATTACGACTCGGAGAAGCTAATTTCAGTGGACCTGTTCCTCCTCAACTTGGAAACCTCTCTAATTTGCACACTCTTGATCTTTACGGTAACGAAGTTGTTAGTTTTGAAAATCTTGAGTGGTTATCTCATCTTTCTTCCTTGAGATACCTGAACATGTCATATCTAGATTTGTCAAAGGTCATGAATTGGCCACTATCTTTAAGCAAGCTCACTTTACTAACAGAGCTTCAGTTATCCCAGTGTAACCTTCCTAATATCAATCTAAGATCACTTTCCTTTATTAATTCCTCCACCTCTCTTCAAATTCTTCACCTCTCTGTGAACTCTCTTAATTCTTCAATATTTTATTGGATAGCTAATGTCAGCAGCAATTTTATCCATATTGATCTCTCTTCCAACAATCTCAAAGGTCCCATCCCAGATGTCTTCACAAGCATGCTTTCTCTAGTAACACTAGATCTGTCTGAGAATCAACTTGAAGGTGGGATACCAAAAGGCTTTCAAAACTTATGCAGCTTAGAGTCGTTGACCTTATGGTCAAACCAATTGTCTGAAAACATTGAGGACTCTGTTAAAACCTTGTCTTGTGCTGAGAACACACTTGAGACCTTGGACTTGGGTGCTAACTGGTTTTGGGGGTCATGGCCAGATTTGAAACATTTTTCGAAGTTAAGAGAGTTATATCTTGACAGCAATCAAGTAAATGGGTCTCTACGCGAAAGTGTCGGGCAACTCTCTAGCCTTGAAACATTAATTCTCGACGGGAATTCTGTGAGTGGTGTCATAACAGAAGCCCACTTTTTGAACCTCTCTCGTTTACAGTATTTGAGTCTTTCTGGTAATCGTTTCTCTATCAACCTGAGCTCTGATTGGAATCCACCATTTCAACTCACTACGTTATACATGTCCTCTTGCAAGGTGGGCCCAACTTTTCTCAAGTGGATTCTAACGCAGACAAATCTTACCGCTCTTTATCTCTCTAATGCTGGACTATCAGGATCATTACCTAATAAGTTTTGGGATCTATTTTCTCGCTTATCTGACTTAGATCTCTCTATGAACCAAATCCATGGAAAACTGCCGAATCTGTCATCGACAAGTTTAAGTTATGTTAACTTGTCTTCTAATCTATTTTATGGCGCATTGCCATCATTTTCTCCTATGCTACAAAACCTGTATCTCTCGAATAATAGGTTTTCAGGACCTTTGTCTTCCTTCTGTGCAACGCAGGCTCCAAATTTGGAGTATCTTGACATTTCTAAGAACCTATTGTCTGGAGAGCTTCCTAATTGTTGGATGCAATTTCAAGAATTGCAAGTGTTGAATTTGGGAAAGAATAAATTATCTGGAAAAATACCAAGCTCTTTAGGCAATCTACAGGGAATTCAAGTATTGCGTTTACATGATAACAATTTTTCAGGAGAATTGCCTTCTTTAGAGAACTGTACCCGATTATTGATGGTTGATCTTGGCAACAATAACTTGTCGGGAAAGATACCAACATGGATTGGCCAAAGCCTACCAAACTTGTGGACTCTACGCTTACGGTCAAATGAGTTTAATGGAATCATACCCTTCTCCCTGTGCAGTCTAGCTGCCATTCATGTTTTGGACCTCTCTCACAACAGTATTTCAGGAGGCTTGCCACATTGCTTCAATAACATAACCGCTTTGGCTGATGATTCGGGAGTTTATAGTATTATTTATGGTGGAATTGTGGAACTTGTGTGGAAAGGAAAAGAAATTGAGTATGGGGAAAATCTTGACCGTATGAGAAGCATTGACATTTCAAGCAACTATTTGATTGGGGAAATTCCGCCAAGTATAGCAAGTATGACTGAGTTGATTTCTCTGAACCTGTCTAGAAACAAATTGACAGGAAAGCTTCCTGAAGACTTTGGTAACATGAAGATGTTGGAATCTCTTGATTTGTCAAGAAACCGGATGTCTGGTAAAATTCCTAGAAGTTTTGCGAGCTTAAACTTTCTTAGTGTCTTGGACTTATCACGCAACAACTTGTCAGGAAGAATTCCATTAGGCACCCAACTTCAGGGTTTCAATGCTTCTCAATATATGGGAAATCTTGGACTTTGTGGACCACCGCTGACACAAAGTTGTCCAGGAGATGGAACAGTTCAAGATGATGGAATCGCGAGAGGAACTGAAATTGATAACAAAGAACAGGTTAGTGATGGTCTCAACCTTGGATTCTTTATTAGTGCAGTGCTGGGATTTGTCATTGGATTTTGGATGGTCTGCGGCAGTTTACTGCTTAAGACTTCTAGGAGAAATGCTTATTTCAGATTCCTGGACAATGCAAATGATTGGATTTATGTCAAAACCAAGGCAAAAGTGCGGAGGACACTTCAAAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

935

Amino Acids

103.72

Weight (kDa)

5.86

Isoelectric Point (pI)

39.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 42 - 80 8.7e-13 Leucine rich repeat N-terminal domain
LRR_14 PF23598 79 - 302 1.7e-11 Leucine-rich repeat region
LRR_8 PF13855 272 - 327 3.4e-08 Leucine rich repeat
LRR_8 PF13855 367 - 427 7.3e-07 Leucine rich repeat
LRR_8 PF13855 533 - 592 2.9e-06 Leucine rich repeat
LRR_8 PF13855 734 - 792 4.3e-10 Leucine rich repeat
LRR_8 PF13855 777 - 817 1.6e-06 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000028)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g45420 FvH4_4g14031 FvH4_5g20780 FvH4_6g28530 FvH4_7g14020 FvH4_7g14030 FvH4_7g14040 FvH4_7g14050 FvH4_7g14060 FvH4_7g14070 FvH4_7g14090 FvH4_7g14110 FvH4_7g14140 FvH4_7g14450
malus_domestica MD00G1189100.v1.1 MD01G1018600.v1.1 MD01G1053800.v1.1 MD01G1053900.v1.1 MD01G1054000.v1.1 MD01G1054100.v1.1 MD01G1056700.v1.1 MD01G1057000.v1.1 MD01G1057300.v1.1 MD01G1057400.v1.1 MD01G1061600.v1.1 MD01G1061800.v1.1 MD01G1061900.v1.1 MD01G1062000.v1.1 MD01G1062400.v1.1 MD01G1062500.v1.1 MD01G1063200.v1.1 MD01G1063300.v1.1 MD01G1063400.v1.1 MD01G1063700.v1.1 MD01G1063900.v1.1 MD01G1064200.v1.1 MD01G1064300.v1.1 MD01G1064400.v1.1 MD01G1064600.v1.1 MD01G1064700.v1.1 MD01G1181100.v1.1 MD01G1212300.v1.1 MD01G1212500.v1.1 MD01G1212600.v1.1 MD02G1271900.v1.1 MD07G1136500.v1.1 MD07G1139300.v1.1 MD07G1141200.v1.1 MD07G1144700.v1.1 MD08G1144200.v1.1 MD14G1186300.v1.1 MD14G1186500.v1.1 MD14G1186700.v1.1 MD14G1186800.v1.1 MD15G1351300.v1.1 MD15G1439500.v1.1
prunus_persica Prupe.1G067000_v2.0.a1 Prupe.2G077400_v2.0.a1 Prupe.2G077700_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078600_v2.0.a1 Prupe.2G078800_v2.0.a1 Prupe.2G099600_v2.0.a1 Prupe.2G099700_v2.0.a1 Prupe.2G155100_v2.0.a1 Prupe.2G155500_v2.0.a1 Prupe.2G155600_v2.0.a1 Prupe.2G155800_v2.0.a1 Prupe.2G155900_v2.0.a1 Prupe.2G156100_v2.0.a1 Prupe.2G166100_v2.0.a1 Prupe.2G166300_v2.0.a1 Prupe.2G167500_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G168400_v2.0.a1 Prupe.2G168700_v2.0.a1 Prupe.2G168800_v2.0.a1 Prupe.2G169000_v2.0.a1 Prupe.2G169100_v2.0.a1 Prupe.2G169200_v2.0.a1 Prupe.2G169500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G172300_v2.0.a1 Prupe.2G304800_v2.0.a1 Prupe.4G264800_v2.0.a1 Prupe.4G265000_v2.0.a1 Prupe.5G051900_v2.0.a1 Prupe.5G052000_v2.0.a1
pyrus_communis pycom01g08380 pycom01g08430 pycom01g08490 pycom01g08520 pycom01g08540 pycom01g08550 pycom01g08600 pycom01g08630 pycom01g08660 pycom01g08720 pycom01g09180 pycom01g09200 pycom01g09210 pycom01g09270 pycom01g09280 pycom01g09300 pycom01g09380 pycom01g19110 pycom01g22260 pycom01g22310 pycom01g22330 pycom01g22350 pycom01g22360 pycom02g23250 pycom07g13420 pycom07g13670 pycom07g13900 pycom07g13910 pycom07g13960 pycom07g13970 pycom07g25680 pycom11g22830
rosa_chinensis RchiOBHm_Chr0c22g0500431 RchiOBHm_Chr0c22g0500441 RchiOBHm_Chr0c22g0500561 RchiOBHm_Chr0c22g0500571 RchiOBHm_Chr0c22g0500611 RchiOBHm_Chr0c22g0500621 RchiOBHm_Chr0c22g0500631 RchiOBHm_Chr0c22g0500681 RchiOBHm_Chr1g0348221 RchiOBHm_Chr1g0348251 RchiOBHm_Chr1g0352861 RchiOBHm_Chr1g0352871 RchiOBHm_Chr1g0352891 RchiOBHm_Chr1g0352901 RchiOBHm_Chr1g0354671 RchiOBHm_Chr1g0354701 RchiOBHm_Chr1g0354711 RchiOBHm_Chr1g0354751 RchiOBHm_Chr1g0354761 RchiOBHm_Chr1g0354841 RchiOBHm_Chr1g0354851 RchiOBHm_Chr1g0354881 RchiOBHm_Chr1g0354971 RchiOBHm_Chr1g0354981 RchiOBHm_Chr1g0354991 RchiOBHm_Chr1g0355001 RchiOBHm_Chr1g0355011 RchiOBHm_Chr1g0355021 RchiOBHm_Chr1g0355861 RchiOBHm_Chr1g0379671 RchiOBHm_Chr1g0379681 RchiOBHm_Chr2g0096591 RchiOBHm_Chr2g0132821 RchiOBHm_Chr3g0454901 RchiOBHm_Chr3g0472711 RchiOBHm_Chr4g0400791 RchiOBHm_Chr5g0069481 RchiOBHm_Chr5g0069511 RchiOBHm_Chr5g0069551 RchiOBHm_Chr6g0254651 RchiOBHm_Chr6g0259721 RchiOBHm_Chr7g0205911 RchiOBHm_Chr7g0206401 RchiOBHm_Chr7g0206571 RchiOBHm_Chr7g0206581 RchiOBHm_Chr7g0206621 RchiOBHm_Chr7g0206631 RchiOBHm_Chr7g0206641 RchiOBHm_Chr7g0206681 RchiOBHm_Chr7g0206691 RchiOBHm_Chr7g0206751 RchiOBHm_Chr7g0206761 RchiOBHm_Chr7g0206851 RchiOBHm_Chr7g0206911 RchiOBHm_Chr7g0206921 RchiOBHm_Chr7g0207001 RchiOBHm_Chr7g0207011 RchiOBHm_Chr7g0207031 RchiOBHm_Chr7g0207101 RchiOBHm_Chr7g0207161 RchiOBHm_Chr7g0207201 RchiOBHm_Chr7g0207271 RchiOBHm_Chr7g0207301 RchiOBHm_Chr7g0207311 RchiOBHm_Chr7g0207421 RchiOBHm_Chr7g0207481 RchiOBHm_Chr7g0207491 RchiOBHm_Chr7g0207501 RchiOBHm_Chr7g0207521 RchiOBHm_Chr7g0207531 RchiOBHm_Chr7g0207561 RchiOBHm_Chr7g0207571 RchiOBHm_Chr7g0207581 RchiOBHm_Chr7g0207601 RchiOBHm_Chr7g0207621 RchiOBHm_Chr7g0207631 RchiOBHm_Chr7g0207651 RchiOBHm_Chr7g0207661 RchiOBHm_Chr7g0207711 RchiOBHm_Chr7g0207761 RchiOBHm_Chr7g0207801 RchiOBHm_Chr7g0208821 RchiOBHm_Chr7g0208831 RchiOBHm_Chr7g0208841 RchiOBHm_Chr7g0213601 RchiOBHm_Chr7g0215981 RchiOBHm_Chr7g0216021
rosa_laevigata RLG00000003193 RLG00000003194 RLG00000003287 RLG00000003288 RLG00000003289 RLG00000003293 RLG00000003294 RLG00000003295 RLG00000003297 RLG00000003299 RLG00000003301 RLG00000003327 RLG00000003347 RLG00000016653 RLG00000018642 RLG00000018643 RLG00000019285 RLG00000022542 RLG00000026368 RLG00000026371 RLG00000028124 RLG00000028125 RLG00000028183 RLG00000028184 RLG00000028185 RLG00000028188 RLG00000028673 RLG00000029267 RLG00000029325 RLG00000029674 RLG00000032883 RLG00000036055 RLG00000036058 RLG00000036065 RLG00000036068 RLG00000036071 RLG00000036072 RLG00000036075 RLG00000036076
rosa_multiflora Rmu_co8250183.1_g000001 Rmu_co8271981.1_g000001 Rmu_co8410829.1_g000001 Rmu_co8432879.1_g000001 Rmu_co8441941.1_g000001 Rmu_sc0000076.1_g000031 Rmu_sc0000738.1_g000038 Rmu_sc0000848.1_g000003 Rmu_sc0000848.1_g000014 Rmu_sc0000848.1_g000015 Rmu_sc0000848.1_g000016 Rmu_sc0001264.1_g000001 Rmu_sc0002284.1_g000018 Rmu_sc0002356.1_g000011 Rmu_sc0003020.1_g000003 Rmu_sc0003115.1_g000001 Rmu_sc0003115.1_g000002 Rmu_sc0003115.1_g000003 Rmu_sc0003115.1_g000004 Rmu_sc0003115.1_g000005 Rmu_sc0003115.1_g000008 Rmu_sc0003115.1_g000010 Rmu_sc0003115.1_g000011 Rmu_sc0003115.1_g000014 Rmu_sc0003565.1_g000002 Rmu_sc0003652.1_g000013 Rmu_sc0003652.1_g000015 Rmu_sc0003652.1_g000016 Rmu_sc0003652.1_g000019 Rmu_sc0003940.1_g000001 Rmu_sc0003940.1_g000004 Rmu_sc0003940.1_g000009 Rmu_sc0004084.1_g000010 Rmu_sc0004705.1_g000021 Rmu_sc0004972.1_g000007 Rmu_sc0004987.1_g000002 Rmu_sc0004987.1_g000006 Rmu_sc0005065.1_g000018 Rmu_sc0005065.1_g000029 Rmu_sc0005391.1_g000002 Rmu_sc0005633.1_g000003 Rmu_sc0005633.1_g000008 Rmu_sc0006632.1_g000014 Rmu_sc0006632.1_g000018 Rmu_sc0006681.1_g000010 Rmu_sc0006681.1_g000011 Rmu_sc0006733.1_g000003 Rmu_sc0007385.1_g000005 Rmu_sc0007385.1_g000007 Rmu_sc0007385.1_g000009 Rmu_sc0007385.1_g000016 Rmu_sc0007645.1_g000002 Rmu_sc0007645.1_g000003 Rmu_sc0007645.1_g000022 Rmu_sc0007828.1_g000008 Rmu_sc0008509.1_g000003 Rmu_sc0008509.1_g000015 Rmu_sc0008509.1_g000016 Rmu_sc0008509.1_g000020 Rmu_sc0008509.1_g000030 Rmu_sc0008509.1_g000041 Rmu_sc0008756.1_g000001 Rmu_sc0008756.1_g000003 Rmu_sc0013028.1_g000002 Rmu_sc0013028.1_g000003 Rmu_sc0013028.1_g000005 Rmu_sc0013160.1_g000001 Rmu_sc0014454.1_g000009 Rmu_sc0014455.1_g000007 Rmu_sc0014659.1_g000004 Rmu_sc0017798.1_g000002 Rmu_sc0017798.1_g000004 Rmu_sc0029608.1_g000001 Rmu_sc0037861.1_g000001 Rmu_sc0038750.1_g000001 Rmu_sc0042995.1_g000001 Rmu_ssc0000161.1_g000017
rosa_roxburghii Rroxscaffold_1G00009180 Rroxscaffold_1G00009190 Rroxscaffold_1G00011450 Rroxscaffold_1G00011480 Rroxscaffold_2G00111660 Rroxscaffold_2G00113570 Rroxscaffold_2G00122140 Rroxscaffold_3G00243730 Rroxscaffold_3G00245750 Rroxscaffold_3G00245760 Rroxscaffold_3G00250220 Rroxscaffold_3G00251160 Rroxscaffold_3G00251270 Rroxscaffold_3G00251280 Rroxscaffold_3G00251300 Rroxscaffold_3G00251340 Rroxscaffold_3G00251350 Rroxscaffold_3G00251390 Rroxscaffold_3G00251400 Rroxscaffold_3G00251560 Rroxscaffold_3G00251570 Rroxscaffold_3G00251870 Rroxscaffold_3G00252200 Rroxscaffold_3G00252210 Rroxscaffold_4G00279970 Rroxscaffold_4G00299970 Rroxscaffold_4G00300760 Rroxscaffold_4G00300780 Rroxscaffold_4G00300810 Rroxscaffold_4G00300850 Rroxscaffold_4G00307080 Rroxscaffold_4G00307100 Rroxscaffold_4G00313990 Rroxscaffold_6G00405080
rosa_rugosa Rorug01G0193600 Rorug01G0193700 Rorug01G0243800 Rorug01G0244000 Rorug01G0244000 Rorug01G0244400 Rorug01G0414300.1 Rorug01G0414500 Rorug01G0414600 Rorug02G0235600 Rorug02G0307900 Rorug02G0583100 Rorug02G0583200 Rorug02G0583300 Rorug05G0398000 Rorug05G0398100 Rorug05G0398200 Rorug05G0580300 Rorug05G0590300 Rorug06G0116000 Rorug06G0116100 Rorug07G0096800 Rorug07G0097100.1 Rorug07G0097200 Rorug07G0098600 Rorug07G0098600 Rorug07G0098700 Rorug07G0099100 Rorug07G0106100 Rorug07G0106200 Rorug07G0106200 Rorug07G0106300 Rorug07G0157600 Rorug07G0157700 Rorug07G0157700 Rorug07G0157800
rosa_samantha Rh1AG255500 Rh1AG256700 Rh1BG225800 Rh1BG226200 Rh1BG230000 Rh1CG195300 Rh1CG238400 Rh1CG238500 Rh1CG238900 Rh1CG239000 Rh1CG239300 Rh1CG239400 Rh1CG239800 Rh1CG240000 Rh1CG240200 Rh1CG240300 Rh1CG244300 Rh1CG406900 Rh1CG407300 Rh1CG407400 Rh2CG343600 Rh2DG383200 Rh3BG205900 Rh4AG404400 Rh4BG415500 Rh5AG455200 Rh5AG455600 Rh5CG497000 Rh5CG497200 Rh7AG228800 Rh7AG230400 Rh7AG230800 Rh7AG231200 Rh7AG231600 Rh7AG231800 Rh7AG232100 Rh7AG241600 Rh7BG236200 Rh7CG238200 Rh7CG239100 Rh7CG243400 Rh7CG244900
rosa_wichuraiana Rw0G023040 Rw1G017780 Rw1G022320 Rw1G022340 Rw1G022410 Rw1G022420 Rw1G022440 Rw1G022460 Rw1G022490 Rw1G022500 Rw1G022530 Rw1G022550 Rw1G022560 Rw1G022600 Rw1G023060 Rw1G038150 Rw1G038160 Rw2G008210 Rw2G022350 Rw2G029290 Rw4G015050 Rw4G019850 Rw5G024060 Rw5G042460 Rw7G019160 Rw7G019460 Rw7G019690 Rw7G019830 Rw7G019860 Rw7G019880 Rw7G019890 Rw7G019930 Rw7G019990 Rw7G020460 Rw7G025100 Rw7G025120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 372
AasI GACNNNNNNGTC 1 cut(s) 967
AccB1I GGYRCC 1 cut(s) 2471
AccB7I CCANNNNNTGG 1 cut(s) 2558
AccBSI CCGCTC 1 cut(s) 1400
AccII CGCG 2 cut(s) 1149, 2585
AciI CCGC 6 cut(s) 1398, 2100, 2249, 2534, 2691, 2788
AclWI GGATC 2 cut(s) 1438, 1461
AcoI YGGCCR 4 cut(s) 63, 620, 1076, 1942
AcsI RAATTY 8 cut(s) 735, 1198, 1669, 1756, 1815, 2244, 2388, 2460
AcuI CTGAAG 3 cut(s) 644, 2343, 2465
AfaI GTAC 1 cut(s) 1879
AfiI CCNNNNNNNGG 4 cut(s) 311, 479, 2482, 2558
AflII CTTAAG 1 cut(s) 2705
AflIII ACRYGT 2 cut(s) 585, 1335
AjnI CCWGG 2 cut(s) 2551, 2739
Alw21I GWGCWC 1 cut(s) 1298
Alw26I GTCTC 3 cut(s) 1031, 1146, 2633
AlwI GGATC 2 cut(s) 1438, 1461
AoxI GGCC 5 cut(s) 63, 620, 1076, 1354, 1942
ApaI GGGCCC 1 cut(s) 1358
ApeKI GCWGC 4 cut(s) 213, 798, 945, 2027
ApoI RAATTY 8 cut(s) 735, 1198, 1669, 1756, 1815, 2244, 2388, 2460
ArsI GACNNNNNNTTYG 2 cut(s) 965, 997
AseI ATTAAT 2 cut(s) 714, 1184
AspLEI GCGC 1 cut(s) 1574
AspS9I GGNCC 8 cut(s) 361, 461, 842, 1354, 1355, 1634, 2044, 2528
AsuHPI GGTGA 3 cut(s) 250, 326, 734
AsuII TTCGAA 1 cut(s) 1097
AvaII GGWCC 6 cut(s) 361, 461, 842, 1634, 2044, 2528
BaeGI GKGCMC 1 cut(s) 1358
BalI TGGCCA 4 cut(s) 65, 622, 1078, 1944
BanI GGYRCC 1 cut(s) 2471
BanII GRGCYC 2 cut(s) 1298, 1358
BarI GAAGNNNNNNTAC 2 cut(s) 903, 935
BbsI GAAGAC 4 cut(s) 850, 1545, 1635, 2331
Bbv12I GWGCWC 1 cut(s) 1298
BbvI GCAGC 4 cut(s) 200, 810, 957, 2014
BccI CCATC 7 cut(s) 854, 1588, 1885, 2552, 2570, 2618, 2677
BciT130I CCWGG 2 cut(s) 2553, 2741
BciVI GTATCC 1 cut(s) 912
BclI TGATCA 1 cut(s) 390
BcoDI GTCTC 3 cut(s) 1031, 1146, 2633
BfaI CTAG 9 cut(s) 90, 596, 878, 887, 1170, 2024, 2295, 2394, 2715
BfmI CTRYAG 1 cut(s) 1808
BfrI CTTAAG 1 cut(s) 2705
BfuI GTATCC 1 cut(s) 912
BglII AGATCT 2 cut(s) 889, 1480
BisI GCNGC 5 cut(s) 214, 799, 946, 2028, 2692
BlsI GCNGC 5 cut(s) 215, 800, 947, 2029, 2693
Bme1390I CCNGG 2 cut(s) 2553, 2741
Bme18I GGWCC 6 cut(s) 361, 461, 842, 1634, 2044, 2528
BmgT120I GGNCC 8 cut(s) 361, 461, 842, 1354, 1355, 1634, 2044, 2528
BmiI GGNNCC 4 cut(s) 844, 1356, 1665, 2473
BmrFI CCNGG 2 cut(s) 2553, 2741
BmrI ACTGGG 1 cut(s) 664
BmsI GCATC 1 cut(s) 1719
BmuI ACTGGG 1 cut(s) 664
BoxI GACNNNNGTC 1 cut(s) 1639
BpiI GAAGAC 4 cut(s) 850, 1545, 1635, 2331
BpmI CTGGAG 3 cut(s) 88, 131, 1728
Bpu10I CCTNAGC 1 cut(s) 1292
Bpu14I TTCGAA 1 cut(s) 1097
BpuEI CTTGAG 4 cut(s) 566, 592, 1055, 1352
BsaBI GATNNNNATC 1 cut(s) 1305
BsaI GGTCTC 3 cut(s) 1031, 1146, 2633
BsaJI CCNNGG 4 cut(s) 1041, 1501, 2635, 2775
BsaWI WCCGGW 1 cut(s) 2373
BsaXI ACNNNNNCTCC 2 cut(s) 1648, 1678
Bsc4I CCNNNNNNNGG 4 cut(s) 311, 479, 2482, 2558
Bse1I ACTGG 3 cut(s) 148, 670, 1064
Bse3DI GCAATG 3 cut(s) 66, 1574, 2080
Bse8I GATNNNNATC 1 cut(s) 1305
BseBI CCWGG 2 cut(s) 2553, 2741
BseDI CCNNGG 4 cut(s) 1041, 1501, 2635, 2775
BseGI GGATG 5 cut(s) 175, 846, 1734, 2382, 2688
BseJI GATNNNNATC 1 cut(s) 1305
BseLI CCNNNNNNNGG 4 cut(s) 311, 479, 2482, 2558
BseMI GCAATG 3 cut(s) 66, 1574, 2080
BseMII CTCAG 5 cut(s) 379, 888, 1014, 1283, 2262
BseNI ACTGG 3 cut(s) 148, 670, 1064
BseRI GAGGAG 1 cut(s) 462
BseSI GKGCMC 1 cut(s) 1358
BseXI GCAGC 4 cut(s) 200, 810, 957, 2014
BseYI CCCAGC 1 cut(s) 2659
BsgI GTGCAG 2 cut(s) 2038, 2673
Bsh1236I CGCG 2 cut(s) 1149, 2585
BshFI GGCC 5 cut(s) 65, 622, 1078, 1356, 1944
BshNI GGYRCC 1 cut(s) 2471
BsiHKAI GWGCWC 1 cut(s) 1298
BsiSI CCGG 1 cut(s) 2374
BslFI GGGAC 1 cut(s) 828
BslI CCNNNNNNNGG 4 cut(s) 311, 479, 2482, 2558
BsmAI GTCTC 3 cut(s) 1031, 1146, 2633
BsmFI GGGAC 1 cut(s) 828
BsmI GAATGC 1 cut(s) 34
BsnI GGCC 5 cut(s) 65, 622, 1078, 1356, 1944
Bso31I GGTCTC 3 cut(s) 1031, 1146, 2633
Bsp119I TTCGAA 1 cut(s) 1097
Bsp120I GGGCCC 1 cut(s) 1354
Bsp1286I GDGCHC 2 cut(s) 1298, 1358
Bsp143I GATC 9 cut(s) 390, 508, 698, 817, 889, 1430, 1453, 1480, 1897
Bsp19I CCATGG 1 cut(s) 1501
Bsp68I TCGCGA 1 cut(s) 2585
BspACI CCGC 6 cut(s) 1398, 2100, 2249, 2534, 2691, 2788
BspANI GGCC 5 cut(s) 65, 622, 1078, 1356, 1944
BspCNI CTCAG 5 cut(s) 378, 889, 1015, 1284, 2263
BspFNI CGCG 2 cut(s) 1149, 2585
BspHI TCATGA 1 cut(s) 612
BspLI GGNNCC 4 cut(s) 844, 1356, 1665, 2473
BspPI GGATC 2 cut(s) 1438, 1461
BspQI GCTCTTC 1 cut(s) 147
BspT104I TTCGAA 1 cut(s) 1097
BspT107I GGYRCC 1 cut(s) 2471
BspTI CTTAAG 1 cut(s) 2705
BspTNI GGTCTC 3 cut(s) 1031, 1146, 2633
BsrBI CCGCTC 1 cut(s) 1400
BsrDI GCAATG 3 cut(s) 66, 1574, 2080
BsrI ACTGG 3 cut(s) 148, 670, 1064
BssECI CCNNGG 4 cut(s) 1041, 1501, 2635, 2775
BssMI GATC 9 cut(s) 390, 508, 698, 817, 889, 1430, 1453, 1480, 1897
BssT1I CCWWGG 4 cut(s) 1041, 1501, 2635, 2775
Bst2UI CCWGG 2 cut(s) 2553, 2741
Bst4CI ACNGT 7 cut(s) 518, 1254, 1877, 1980, 2060, 2201, 2566
Bst6I CTCTTC 3 cut(s) 147, 735, 829
BstAFI CTTAAG 1 cut(s) 2705
BstBI TTCGAA 1 cut(s) 1097
BstC8I GCNNGC 7 cut(s) 138, 235, 638, 869, 1662, 2075, 2407
BstDSI CCRYGG 1 cut(s) 1501
BstENI CCTNNNNNAGG 1 cut(s) 309
BstF5I GGATG 5 cut(s) 175, 846, 1734, 2382, 2688
BstFNI CGCG 2 cut(s) 1149, 2585
BstHHI GCGC 1 cut(s) 1574
BstKTI GATC 9 cut(s) 393, 511, 701, 820, 892, 1433, 1456, 1483, 1900
BstMAI GTCTC 3 cut(s) 1031, 1146, 2633
BstMBI GATC 9 cut(s) 390, 508, 698, 817, 889, 1430, 1453, 1480, 1897
BstMWI GCNNNNNNNGC 3 cut(s) 1353, 1661, 1800
BstNI CCWGG 2 cut(s) 2553, 2741
BstNSI RCATGY 5 cut(s) 140, 237, 589, 871, 1339
BstPAI GACNNNNGTC 1 cut(s) 1639
BstSCI CCNGG 2 cut(s) 2551, 2739
BstSFI CTRYAG 1 cut(s) 1808
BstSLI GKGCMC 1 cut(s) 1358
BstUI CGCG 2 cut(s) 1149, 2585
BstV1I GCAGC 4 cut(s) 200, 810, 957, 2014
BstV2I GAAGAC 4 cut(s) 850, 1545, 1635, 2331
BstX2I RGATCY 3 cut(s) 889, 1453, 1480
BstXI CCANNNNNNTGG 2 cut(s) 1502, 1962
BstYI RGATCY 3 cut(s) 889, 1453, 1480
BsuI GTATCC 1 cut(s) 912
BsuRI GGCC 5 cut(s) 65, 622, 1078, 1356, 1944
BtgI CCRYGG 1 cut(s) 1501
BtsCI GGATG 5 cut(s) 175, 846, 1734, 2382, 2688
BtsI GCAGTG 1 cut(s) 2661
BtsIMutI CAGTG 3 cut(s) 463, 677, 2661
BtuMI TCGCGA 1 cut(s) 2585
Cac8I GCNNGC 7 cut(s) 138, 235, 638, 869, 1662, 2075, 2407
CciI TCATGA 1 cut(s) 612
CfoI GCGC 1 cut(s) 1574
Cfr13I GGNCC 8 cut(s) 361, 461, 842, 1354, 1355, 1634, 2044, 2528
Csp6I GTAC 1 cut(s) 1878
CviQI GTAC 1 cut(s) 1878
DpnI GATC 9 cut(s) 392, 510, 700, 819, 891, 1432, 1455, 1482, 1899
DpnII GATC 9 cut(s) 390, 508, 698, 817, 889, 1430, 1453, 1480, 1897
DrdI GACNNNNNNGTC 1 cut(s) 967
DseDI GACNNNNNNGTC 1 cut(s) 967
EaeI YGGCCR 4 cut(s) 63, 620, 1076, 1942
Eam1104I CTCTTC 3 cut(s) 147, 735, 829
EarI CTCTTC 3 cut(s) 147, 735, 829
EciI GGCGGA 1 cut(s) 2238
Ecl136II GAGCTC 1 cut(s) 1296
Eco130I CCWWGG 4 cut(s) 1041, 1501, 2635, 2775
Eco24I GRGCYC 2 cut(s) 1298, 1358
Eco31I GGTCTC 3 cut(s) 1031, 1146, 2633
Eco47I GGWCC 6 cut(s) 361, 461, 842, 1634, 2044, 2528
Eco53kI GAGCTC 1 cut(s) 1296
Eco57I CTGAAG 3 cut(s) 644, 2343, 2465
EcoICRI GAGCTC 1 cut(s) 1296
EcoNI CCTNNNNNAGG 1 cut(s) 309
EcoO109I RGGNCCY 2 cut(s) 842, 1634
EcoRI GAATTC 3 cut(s) 1198, 1815, 2460
EcoRII CCWGG 2 cut(s) 2551, 2739
EcoT14I CCWWGG 4 cut(s) 1041, 1501, 2635, 2775
EcoT22I ATGCAT 1 cut(s) 36
EcoT38I GRGCYC 2 cut(s) 1298, 1358
ErhI CCWWGG 4 cut(s) 1041, 1501, 2635, 2775
FalI AAGNNNNNCTT 2 cut(s) 146, 178
FaqI GGGAC 1 cut(s) 828
FbaI TGATCA 1 cut(s) 390
Fnu4HI GCNGC 5 cut(s) 214, 799, 946, 2028, 2692
FokI GGATG 5 cut(s) 182, 833, 1741, 2389, 2695
FriOI GRGCYC 2 cut(s) 1298, 1358
Fsp4HI GCNGC 5 cut(s) 214, 799, 946, 2028, 2692
FspBI CTAG 9 cut(s) 90, 596, 878, 887, 1170, 2024, 2295, 2394, 2715
GlaI GCGC 1 cut(s) 1573
GluI GCNGC 5 cut(s) 214, 799, 946, 2028, 2692
GsaI CCCAGC 1 cut(s) 2663
GsuI CTGGAG 3 cut(s) 88, 131, 1728
HaeIII GGCC 5 cut(s) 65, 622, 1078, 1356, 1944
HapII CCGG 1 cut(s) 2374
HhaI GCGC 1 cut(s) 1574
Hin6I GCGC 1 cut(s) 1572
HinP1I GCGC 1 cut(s) 1572
HincII GTYRAC 2 cut(s) 960, 1546
HindII GTYRAC 2 cut(s) 960, 1546
HindIII AAGCTT 1 cut(s) 2315
HpaI GTTAAC 1 cut(s) 1546
HpaII CCGG 1 cut(s) 2374
HphI GGTGA 3 cut(s) 250, 326, 734
Hpy166II GTNNAC 9 cut(s) 461, 754, 960, 1250, 1546, 1832, 1965, 2528, 2699
Hpy188I TCNGA 7 cut(s) 443, 898, 985, 1300, 1474, 2286, 2735
Hpy8I GTNNAC 9 cut(s) 461, 754, 960, 1250, 1546, 1832, 1965, 2528, 2699
Hpy99I CGWCG 1 cut(s) 1196
HpyAV CCTTC 6 cut(s) 336, 689, 905, 1657, 1872, 2017
HpyCH4III ACNGT 7 cut(s) 518, 1254, 1877, 1980, 2060, 2201, 2566
HpyCH4IV ACGT 1 cut(s) 1328
HpyF10VI GCNNNNNNNGC 3 cut(s) 1353, 1661, 1800
HpySE526I ACGT 1 cut(s) 1328
HspAI GCGC 1 cut(s) 1572
Ksp22I TGATCA 1 cut(s) 390
KspAI GTTAAC 1 cut(s) 1546
Kzo9I GATC 9 cut(s) 390, 508, 698, 817, 889, 1430, 1453, 1480, 1897
LguI GCTCTTC 1 cut(s) 147
LmnI GCTCC 2 cut(s) 107, 1669
Lsp1109I GCAGC 4 cut(s) 200, 810, 957, 2014
LweI GCATC 1 cut(s) 1719
MaeI CTAG 9 cut(s) 90, 596, 878, 887, 1170, 2024, 2295, 2394, 2715
MaeII ACGT 1 cut(s) 1328
MaeIII GTNAC 5 cut(s) 256, 518, 674, 880, 2333
MalI GATC 9 cut(s) 392, 510, 700, 819, 891, 1432, 1455, 1482, 1899
MbiI CCGCTC 1 cut(s) 1400
MboI GATC 9 cut(s) 390, 508, 698, 817, 889, 1430, 1453, 1480, 1897
MfeI CAATTG 2 cut(s) 422, 977
MflI RGATCY 3 cut(s) 889, 1453, 1480
MhlI GDGCHC 2 cut(s) 1298, 1358
MlsI TGGCCA 4 cut(s) 65, 622, 1078, 1944
MluNI TGGCCA 4 cut(s) 65, 622, 1078, 1944
MlyI GAGTC 7 cut(s) 182, 427, 432, 962, 992, 1270, 1960
MmeI TCCRAC 4 cut(s) 76, 852, 1706, 2328
Mox20I TGGCCA 4 cut(s) 65, 622, 1078, 1944
Mph1103I ATGCAT 1 cut(s) 36
MscI TGGCCA 4 cut(s) 65, 622, 1078, 1944
MslI CAYNNNNRTG 2 cut(s) 866, 2342
Msp20I TGGCCA 4 cut(s) 65, 622, 1078, 1944
MspA1I CMGCKG 1 cut(s) 2536
MspCI CTTAAG 1 cut(s) 2705
MspI CCGG 1 cut(s) 2374
MspR9I CCNGG 2 cut(s) 2553, 2741
MunI CAATTG 2 cut(s) 422, 977
Mva1269I GAATGC 1 cut(s) 34
MvaI CCWGG 2 cut(s) 2553, 2741
MvnI CGCG 2 cut(s) 1149, 2585
MwoI GCNNNNNNNGC 3 cut(s) 1353, 1661, 1800
NcoI CCATGG 1 cut(s) 1501
NdeII GATC 9 cut(s) 390, 508, 698, 817, 889, 1430, 1453, 1480, 1897
NlaIV GGNNCC 4 cut(s) 844, 1356, 1665, 2473
NmuCI GTSAC 1 cut(s) 256
NruI TCGCGA 1 cut(s) 2585
NsiI ATGCAT 1 cut(s) 36
NspI RCATGY 5 cut(s) 140, 237, 589, 871, 1339
NspV TTCGAA 1 cut(s) 1097
PaeI GCATGC 3 cut(s) 140, 237, 871
PagI TCATGA 1 cut(s) 612
PciI ACATGT 2 cut(s) 585, 1335
PciSI GCTCTTC 1 cut(s) 147
PctI GAATGC 1 cut(s) 34
PflMI CCANNNNNTGG 1 cut(s) 2558
PfoI TCCNGGA 2 cut(s) 2551, 2739
PkrI GCNGC 5 cut(s) 215, 800, 947, 2029, 2693
PleI GAGTC 7 cut(s) 181, 426, 432, 961, 992, 1269, 1960
PpsI GAGTC 7 cut(s) 181, 426, 432, 961, 992, 1269, 1960
PpuMI RGGWCCY 2 cut(s) 842, 1634
PscI ACATGT 2 cut(s) 585, 1335
PshAI GACNNNNGTC 1 cut(s) 1639
PshBI ATTAAT 2 cut(s) 714, 1184
PsiI TTATAA 1 cut(s) 372
Psp124BI GAGCTC 1 cut(s) 1298
Psp5II RGGWCCY 2 cut(s) 842, 1634
Psp6I CCWGG 2 cut(s) 2551, 2739
PspFI CCCAGC 1 cut(s) 2659
PspGI CCWGG 2 cut(s) 2551, 2739
PspN4I GGNNCC 4 cut(s) 844, 1356, 1665, 2473
PspOMI GGGCCC 1 cut(s) 1354
PspPI GGNCC 8 cut(s) 361, 461, 842, 1354, 1355, 1634, 2044, 2528
PspPPI RGGWCCY 2 cut(s) 842, 1634
PsuI RGATCY 3 cut(s) 889, 1453, 1480
RruI TCGCGA 1 cut(s) 2585
RsaI GTAC 1 cut(s) 1879
RsaNI GTAC 1 cut(s) 1878
RseI CAYNNNNRTG 2 cut(s) 866, 2342
SacI GAGCTC 1 cut(s) 1298
SapI GCTCTTC 1 cut(s) 147
SatI GCNGC 5 cut(s) 214, 799, 946, 2028, 2692
Sau3AI GATC 9 cut(s) 390, 508, 698, 817, 889, 1430, 1453, 1480, 1897
Sau96I GGNCC 8 cut(s) 361, 461, 842, 1354, 1355, 1634, 2044, 2528
SchI GAGTC 7 cut(s) 182, 427, 432, 962, 992, 1270, 1960
ScrFI CCNGG 2 cut(s) 2553, 2741
SduI GDGCHC 2 cut(s) 1298, 1358
SfaNI GCATC 1 cut(s) 1719
SfcI CTRYAG 1 cut(s) 1808
SfuI TTCGAA 1 cut(s) 1097
SinI GGWCC 6 cut(s) 361, 461, 842, 1634, 2044, 2528
SmiMI CAYNNNNRTG 2 cut(s) 866, 2342
SmlI CTYRAG 5 cut(s) 545, 571, 1034, 1367, 2705
SmoI CTYRAG 5 cut(s) 545, 571, 1034, 1367, 2705
SphI GCATGC 3 cut(s) 140, 237, 871
SsiI CCGC 6 cut(s) 1398, 2100, 2249, 2534, 2691, 2788
SspI AATATT 1 cut(s) 774
SspMI CTAG 9 cut(s) 90, 596, 878, 887, 1170, 2024, 2295, 2394, 2715
SstI GAGCTC 1 cut(s) 1298
StyD4I CCNGG 2 cut(s) 2551, 2739
StyI CCWWGG 4 cut(s) 1041, 1501, 2635, 2775
TaaI ACNGT 7 cut(s) 518, 1254, 1877, 1980, 2060, 2201, 2566
TaiI ACGT 1 cut(s) 1331
TaqI TCGA 4 cut(s) 1097, 1191, 1526, 1616
TauI GCSGC 1 cut(s) 2694
TscAI CASTG 3 cut(s) 463, 677, 2661
TseFI GTSAC 1 cut(s) 256
TseI GCWGC 4 cut(s) 213, 798, 945, 2027
Tsp45I GTSAC 1 cut(s) 256
TspDTI ATGAA 5 cut(s) 394, 629, 1505, 2024, 2354
TspRI CASTG 3 cut(s) 463, 677, 2661
Van91I CCANNNNNTGG 1 cut(s) 2558
Vha464I CTTAAG 1 cut(s) 2705
VpaK11BI GGWCC 6 cut(s) 361, 461, 842, 1634, 2044, 2528
VspI ATTAAT 2 cut(s) 714, 1184
XagI CCTNNNNNAGG 1 cut(s) 309
XapI RAATTY 8 cut(s) 735, 1198, 1669, 1756, 1815, 2244, 2388, 2460
XbaI TCTAGA 2 cut(s) 595, 2294
XceI RCATGY 5 cut(s) 140, 237, 589, 871, 1339
XcmI CCANNNNNNNNNTGG 1 cut(s) 2038
XspI CTAG 9 cut(s) 90, 596, 878, 887, 1170, 2024, 2295, 2394, 2715
Zsp2I ATGCAT 1 cut(s) 36
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.