Rw1G022600

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
Physical Location & Seq
Reverse (-)
47897896 .. 47902310
4415 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G022600.1

Sequence Viewer

Length: 2736 bp
ATGGAGTTGGGAAGGTGGCTCAGACATGCTTATGCAATATCAATTGTGCTTCTTCTGCATATCAACGCTTCCTTACCACTCGGCCACCACCATGCTAACGTGACGACGAGGTGCCTAGAGAGAGAGAGGGATGCACTCCTTGCTATCAAACGAGACCTGGTGAATGATCACAATCTACTCTCTTCATGGGGAAGCGAAGCCAAAAGGCAAGACTTTTGCAGATGGGAAAGAGTCTACTGTGACCAGCTGACCGGCCATGTTAGTCAACTTCATCTTAGAGGACTGGCGGTGATCTCTTGGCCAGGTGAACACCTAGATCTCAGTTTCAATGACCTCACCGGGAGCAAAATTCCAGAGGTCATTGGTAACCTGACCAATTTAAGATATCTAGATCTCTTTGGGAATGAATTAGGTGATGAAATTCCGTATCATCAGCTTGGAAACCTTACTCATTTGCAATATCTCAATCTCGGCGGGTATAATGTCATCACTCATGGTGTAGAAAACCTCCATTGGCTCCCACATCTTTCTTCTTTAAAATACCTGGACCTGAGTTCAACCGATCTAAGCAAGGCTTTTGATTGGCTGGAAACAATAAACAAGCTCCCCAATTTAAGAAACTTGACCTTGAGCTTCTGTCGTCTTCCTCCTCCAACTCTTTCCACTTTTTCAAACATAAATTCTTCCAACTCTCTTGTTAGTGTTGATTTGTCTAGAAATCATGTTGTCAGTTCTTCAATATTCAAATGGTTGTGCGATTTAAATACCACCATTGTTCATCTTGACCTCTCTTCCAACCAATTAAGTGGCTTGAATCCTGATAGTTTTGATCTTTCCAATAATCATCTTGCTGGGTCACTTCCTAATCTTACAAGCTTTTCATCATTGGAGGTATTACACCTGTCTAAAAATAAGTTGAGTGTTCTGGATAGTATTGGAAAATTGTCTTCTCTGAAAGAATTATATGTTGATCAAAATCAATTAAGATGGATGATCCCGGAAAGTATTGGGGAACTCTCCAGTTTGTATTTCTTAGATCTCTCTGAAAATCTTTTGAGCGGAAGAATTCCAGAAGGTATTGGGCAACTCTCATCATTGACATATTTAGTTCTTTCTGGAAATCAATTAAGCAGAAGCATACCTGAAAGTATTGGGCAACTATCATCTTTGCGAGATTTAGATCTCTCTAGAAATCTGTTAAGCGGAAGAATACCTCACAGTATTGGACAGTTGTCGGGGTTGTACTATATAAATCTTAGCATGAATCATTTGGCGGGGGTGATTTCAGAAACTCATTTCTCAGAACTCTTCAATTTATCTGATTTAGATTTATCCTATAACTCATTAGAATTCAATGTCAGTTCTGATTGGGTTCCTCCTTTTCAATTGTCTATCCTAAGCTTGCGGTCTTGTATGGTGGGGCCAGATTTCCCAAAATGGCTTCAAACCCAAAAATATTTTTTCTACCTTGACATGTCTTATGCTGACATTTCAGATGTCCTTCCAAGTTGGTTATGGGGTCTATTTAATGAACATTCGACTATAGATCTGTCTCACAATCAAATTAGAGGAACGTTAAGGAGTCCAAAACTTGTATCATTCAGTGGAGCTGAAGTTCGACTTAGTTCCAACCTGTTGGAAGGTCCAATCCCCTCATTTCTATCAAATGCGTCATATTTGGATCTCTCTGATAATAAATTTTCAGAGGTGACTTCCTTCTTGTGTTCATCGAATGTTAAAATTTCCAAATTTCTTGATCTCTCCAAAAACCATATTCCTGGAGAAGTTCCAGATTGCTGGAGACATTGGGTCAATCTAGAACTTCTCGATTTGAGTAACAATTCTTTTTCTGGGAAAATCCCACCCAATATAGGATGTTTACTTCAAATCAAAACGTTGAAATTAAGGAGCAACAGACTTGTGGGAGAATTGCCTTCATCCTTGAAGAATTGTACAAGCTTAAATGTTATTGATCTTGGGAACAATACGCTCTCAAGTTCAGTCCCTGAATGGTTAGGGGTCAGTCTTCCAAATTTGGTTATTCTTATGCTTCAATCTAATCAGTTTAGTGGAAGTTTACCTTCAGAATTATGCCATCTAGCACGCCTTCAAATTTTGGATGTCTCTGGGAATCAAATCTCTGGATCTATACCAAAATGCCTCGATAGTTTGACTTCTTTGGTGCAAGAAGGAAATTCAAATCTAACCATCAGACATTCTTTTAATACATCTGAGGCCGAACCACCTATGAGTTCTCTTTATTATGAGGATGATGCAACCTTCATGTGGAAGAGAACATTGTCTACATACAAAAACACTTTGGGGCTAGTCAAGAGCATTGATCTCTCATGCAACAGATTAACTGGGGAGATTCCAAGTGAAATCACTCATCTTGTTGGGCTCGTTTCTCTGAACCTTTCAAGGAACAATTTGACTGGGCAAATACCTCCAGAGATCGGAAAGTTGAAGTCACTAGATTCTCTTGATTTGGCTCGAAACAAGATAGGTGGCAGGATTCCGACAAGCCTTGCTCAGATCTATGGACTTGGTGTCATGGATTTGTCATTTAACAACTTGTCTGGTGAAATTCCAACTGGTACTCAGCTCCAGAGCTTTGATCCGTCCTTTTATGCCGGAAATCCTCAATTGTGTGGACGTCCACTTGAAGCTTGTAATCCAGAGGGAACTGCGGTCATGGAGATATGCATACTACAACTTCTTGAATGCTTTAAATGA

Protein Analysis

911

Amino Acids

101.26

Weight (kDa)

5.68

Isoelectric Point (pI)

43.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 40 - 81 8.4e-08 Leucine rich repeat N-terminal domain
LRR_14 PF23598 108 - 213 3.6e-09 Leucine-rich repeat region
LRR_14 PF23598 286 - 483 6.7e-21 Leucine-rich repeat region
LRR_8 PF13855 630 - 689 6.2e-06 Leucine rich repeat
LRR_8 PF13855 777 - 835 8.5e-08 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000028)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g45420 FvH4_4g14031 FvH4_5g20780 FvH4_6g28530 FvH4_7g14020 FvH4_7g14030 FvH4_7g14040 FvH4_7g14050 FvH4_7g14060 FvH4_7g14070 FvH4_7g14090 FvH4_7g14110 FvH4_7g14140 FvH4_7g14450
malus_domestica MD00G1189100.v1.1 MD01G1018600.v1.1 MD01G1053800.v1.1 MD01G1053900.v1.1 MD01G1054000.v1.1 MD01G1054100.v1.1 MD01G1056700.v1.1 MD01G1057000.v1.1 MD01G1057300.v1.1 MD01G1057400.v1.1 MD01G1061600.v1.1 MD01G1061800.v1.1 MD01G1061900.v1.1 MD01G1062000.v1.1 MD01G1062400.v1.1 MD01G1062500.v1.1 MD01G1063200.v1.1 MD01G1063300.v1.1 MD01G1063400.v1.1 MD01G1063700.v1.1 MD01G1063900.v1.1 MD01G1064200.v1.1 MD01G1064300.v1.1 MD01G1064400.v1.1 MD01G1064600.v1.1 MD01G1064700.v1.1 MD01G1181100.v1.1 MD01G1212300.v1.1 MD01G1212500.v1.1 MD01G1212600.v1.1 MD02G1271900.v1.1 MD07G1136500.v1.1 MD07G1139300.v1.1 MD07G1141200.v1.1 MD07G1144700.v1.1 MD08G1144200.v1.1 MD14G1186300.v1.1 MD14G1186500.v1.1 MD14G1186700.v1.1 MD14G1186800.v1.1 MD15G1351300.v1.1 MD15G1439500.v1.1
prunus_persica Prupe.1G067000_v2.0.a1 Prupe.2G077400_v2.0.a1 Prupe.2G077700_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078600_v2.0.a1 Prupe.2G078800_v2.0.a1 Prupe.2G099600_v2.0.a1 Prupe.2G099700_v2.0.a1 Prupe.2G155100_v2.0.a1 Prupe.2G155500_v2.0.a1 Prupe.2G155600_v2.0.a1 Prupe.2G155800_v2.0.a1 Prupe.2G155900_v2.0.a1 Prupe.2G156100_v2.0.a1 Prupe.2G166100_v2.0.a1 Prupe.2G166300_v2.0.a1 Prupe.2G167500_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G168400_v2.0.a1 Prupe.2G168700_v2.0.a1 Prupe.2G168800_v2.0.a1 Prupe.2G169000_v2.0.a1 Prupe.2G169100_v2.0.a1 Prupe.2G169200_v2.0.a1 Prupe.2G169500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G172300_v2.0.a1 Prupe.2G304800_v2.0.a1 Prupe.4G264800_v2.0.a1 Prupe.4G265000_v2.0.a1 Prupe.5G051900_v2.0.a1 Prupe.5G052000_v2.0.a1
pyrus_communis pycom01g08380 pycom01g08430 pycom01g08490 pycom01g08520 pycom01g08540 pycom01g08550 pycom01g08600 pycom01g08630 pycom01g08660 pycom01g08720 pycom01g09180 pycom01g09200 pycom01g09210 pycom01g09270 pycom01g09280 pycom01g09300 pycom01g09380 pycom01g19110 pycom01g22260 pycom01g22310 pycom01g22330 pycom01g22350 pycom01g22360 pycom02g23250 pycom07g13420 pycom07g13670 pycom07g13900 pycom07g13910 pycom07g13960 pycom07g13970 pycom07g25680 pycom11g22830
rosa_chinensis RchiOBHm_Chr0c22g0500431 RchiOBHm_Chr0c22g0500441 RchiOBHm_Chr0c22g0500561 RchiOBHm_Chr0c22g0500571 RchiOBHm_Chr0c22g0500611 RchiOBHm_Chr0c22g0500621 RchiOBHm_Chr0c22g0500631 RchiOBHm_Chr0c22g0500681 RchiOBHm_Chr1g0348221 RchiOBHm_Chr1g0348251 RchiOBHm_Chr1g0352861 RchiOBHm_Chr1g0352871 RchiOBHm_Chr1g0352891 RchiOBHm_Chr1g0352901 RchiOBHm_Chr1g0354671 RchiOBHm_Chr1g0354701 RchiOBHm_Chr1g0354711 RchiOBHm_Chr1g0354751 RchiOBHm_Chr1g0354761 RchiOBHm_Chr1g0354841 RchiOBHm_Chr1g0354851 RchiOBHm_Chr1g0354881 RchiOBHm_Chr1g0354971 RchiOBHm_Chr1g0354981 RchiOBHm_Chr1g0354991 RchiOBHm_Chr1g0355001 RchiOBHm_Chr1g0355011 RchiOBHm_Chr1g0355021 RchiOBHm_Chr1g0355861 RchiOBHm_Chr1g0379671 RchiOBHm_Chr1g0379681 RchiOBHm_Chr2g0096591 RchiOBHm_Chr2g0132821 RchiOBHm_Chr3g0454901 RchiOBHm_Chr3g0472711 RchiOBHm_Chr4g0400791 RchiOBHm_Chr5g0069481 RchiOBHm_Chr5g0069511 RchiOBHm_Chr5g0069551 RchiOBHm_Chr6g0254651 RchiOBHm_Chr6g0259721 RchiOBHm_Chr7g0205911 RchiOBHm_Chr7g0206401 RchiOBHm_Chr7g0206571 RchiOBHm_Chr7g0206581 RchiOBHm_Chr7g0206621 RchiOBHm_Chr7g0206631 RchiOBHm_Chr7g0206641 RchiOBHm_Chr7g0206681 RchiOBHm_Chr7g0206691 RchiOBHm_Chr7g0206751 RchiOBHm_Chr7g0206761 RchiOBHm_Chr7g0206851 RchiOBHm_Chr7g0206911 RchiOBHm_Chr7g0206921 RchiOBHm_Chr7g0207001 RchiOBHm_Chr7g0207011 RchiOBHm_Chr7g0207031 RchiOBHm_Chr7g0207101 RchiOBHm_Chr7g0207161 RchiOBHm_Chr7g0207201 RchiOBHm_Chr7g0207271 RchiOBHm_Chr7g0207301 RchiOBHm_Chr7g0207311 RchiOBHm_Chr7g0207421 RchiOBHm_Chr7g0207481 RchiOBHm_Chr7g0207491 RchiOBHm_Chr7g0207501 RchiOBHm_Chr7g0207521 RchiOBHm_Chr7g0207531 RchiOBHm_Chr7g0207561 RchiOBHm_Chr7g0207571 RchiOBHm_Chr7g0207581 RchiOBHm_Chr7g0207601 RchiOBHm_Chr7g0207621 RchiOBHm_Chr7g0207631 RchiOBHm_Chr7g0207651 RchiOBHm_Chr7g0207661 RchiOBHm_Chr7g0207711 RchiOBHm_Chr7g0207761 RchiOBHm_Chr7g0207801 RchiOBHm_Chr7g0208821 RchiOBHm_Chr7g0208831 RchiOBHm_Chr7g0208841 RchiOBHm_Chr7g0213601 RchiOBHm_Chr7g0215981 RchiOBHm_Chr7g0216021
rosa_laevigata RLG00000003193 RLG00000003194 RLG00000003287 RLG00000003288 RLG00000003289 RLG00000003293 RLG00000003294 RLG00000003295 RLG00000003297 RLG00000003299 RLG00000003301 RLG00000003327 RLG00000003347 RLG00000016653 RLG00000018642 RLG00000018643 RLG00000019285 RLG00000022542 RLG00000026368 RLG00000026371 RLG00000028124 RLG00000028125 RLG00000028183 RLG00000028184 RLG00000028185 RLG00000028188 RLG00000028673 RLG00000029267 RLG00000029325 RLG00000029674 RLG00000032883 RLG00000036055 RLG00000036058 RLG00000036065 RLG00000036068 RLG00000036071 RLG00000036072 RLG00000036075 RLG00000036076
rosa_multiflora Rmu_co8250183.1_g000001 Rmu_co8271981.1_g000001 Rmu_co8410829.1_g000001 Rmu_co8432879.1_g000001 Rmu_co8441941.1_g000001 Rmu_sc0000076.1_g000031 Rmu_sc0000738.1_g000038 Rmu_sc0000848.1_g000003 Rmu_sc0000848.1_g000014 Rmu_sc0000848.1_g000015 Rmu_sc0000848.1_g000016 Rmu_sc0001264.1_g000001 Rmu_sc0002284.1_g000018 Rmu_sc0002356.1_g000011 Rmu_sc0003020.1_g000003 Rmu_sc0003115.1_g000001 Rmu_sc0003115.1_g000002 Rmu_sc0003115.1_g000003 Rmu_sc0003115.1_g000004 Rmu_sc0003115.1_g000005 Rmu_sc0003115.1_g000008 Rmu_sc0003115.1_g000010 Rmu_sc0003115.1_g000011 Rmu_sc0003115.1_g000014 Rmu_sc0003565.1_g000002 Rmu_sc0003652.1_g000013 Rmu_sc0003652.1_g000015 Rmu_sc0003652.1_g000016 Rmu_sc0003652.1_g000019 Rmu_sc0003940.1_g000001 Rmu_sc0003940.1_g000004 Rmu_sc0003940.1_g000009 Rmu_sc0004084.1_g000010 Rmu_sc0004705.1_g000021 Rmu_sc0004972.1_g000007 Rmu_sc0004987.1_g000002 Rmu_sc0004987.1_g000006 Rmu_sc0005065.1_g000018 Rmu_sc0005065.1_g000029 Rmu_sc0005391.1_g000002 Rmu_sc0005633.1_g000003 Rmu_sc0005633.1_g000008 Rmu_sc0006632.1_g000014 Rmu_sc0006632.1_g000018 Rmu_sc0006681.1_g000010 Rmu_sc0006681.1_g000011 Rmu_sc0006733.1_g000003 Rmu_sc0007385.1_g000005 Rmu_sc0007385.1_g000007 Rmu_sc0007385.1_g000009 Rmu_sc0007385.1_g000016 Rmu_sc0007645.1_g000002 Rmu_sc0007645.1_g000003 Rmu_sc0007645.1_g000022 Rmu_sc0007828.1_g000008 Rmu_sc0008509.1_g000003 Rmu_sc0008509.1_g000015 Rmu_sc0008509.1_g000016 Rmu_sc0008509.1_g000020 Rmu_sc0008509.1_g000030 Rmu_sc0008509.1_g000041 Rmu_sc0008756.1_g000001 Rmu_sc0008756.1_g000003 Rmu_sc0013028.1_g000002 Rmu_sc0013028.1_g000003 Rmu_sc0013028.1_g000005 Rmu_sc0013160.1_g000001 Rmu_sc0014454.1_g000009 Rmu_sc0014455.1_g000007 Rmu_sc0014659.1_g000004 Rmu_sc0017798.1_g000002 Rmu_sc0017798.1_g000004 Rmu_sc0029608.1_g000001 Rmu_sc0037861.1_g000001 Rmu_sc0038750.1_g000001 Rmu_sc0042995.1_g000001 Rmu_ssc0000161.1_g000017
rosa_roxburghii Rroxscaffold_1G00009180 Rroxscaffold_1G00009190 Rroxscaffold_1G00011450 Rroxscaffold_1G00011480 Rroxscaffold_2G00111660 Rroxscaffold_2G00113570 Rroxscaffold_2G00122140 Rroxscaffold_3G00243730 Rroxscaffold_3G00245750 Rroxscaffold_3G00245760 Rroxscaffold_3G00250220 Rroxscaffold_3G00251160 Rroxscaffold_3G00251270 Rroxscaffold_3G00251280 Rroxscaffold_3G00251300 Rroxscaffold_3G00251340 Rroxscaffold_3G00251350 Rroxscaffold_3G00251390 Rroxscaffold_3G00251400 Rroxscaffold_3G00251560 Rroxscaffold_3G00251570 Rroxscaffold_3G00251870 Rroxscaffold_3G00252200 Rroxscaffold_3G00252210 Rroxscaffold_4G00279970 Rroxscaffold_4G00299970 Rroxscaffold_4G00300760 Rroxscaffold_4G00300780 Rroxscaffold_4G00300810 Rroxscaffold_4G00300850 Rroxscaffold_4G00307080 Rroxscaffold_4G00307100 Rroxscaffold_4G00313990 Rroxscaffold_6G00405080
rosa_rugosa Rorug01G0193600 Rorug01G0193700 Rorug01G0243800 Rorug01G0244000 Rorug01G0244000 Rorug01G0244400 Rorug01G0414300.1 Rorug01G0414500 Rorug01G0414600 Rorug02G0235600 Rorug02G0307900 Rorug02G0583100 Rorug02G0583200 Rorug02G0583300 Rorug05G0398000 Rorug05G0398100 Rorug05G0398200 Rorug05G0580300 Rorug05G0590300 Rorug06G0116000 Rorug06G0116100 Rorug07G0096800 Rorug07G0097100.1 Rorug07G0097200 Rorug07G0098600 Rorug07G0098600 Rorug07G0098700 Rorug07G0099100 Rorug07G0106100 Rorug07G0106200 Rorug07G0106200 Rorug07G0106300 Rorug07G0157600 Rorug07G0157700 Rorug07G0157700 Rorug07G0157800
rosa_samantha Rh1AG255500 Rh1AG256700 Rh1BG225800 Rh1BG226200 Rh1BG230000 Rh1CG195300 Rh1CG238400 Rh1CG238500 Rh1CG238900 Rh1CG239000 Rh1CG239300 Rh1CG239400 Rh1CG239800 Rh1CG240000 Rh1CG240200 Rh1CG240300 Rh1CG244300 Rh1CG406900 Rh1CG407300 Rh1CG407400 Rh2CG343600 Rh2DG383200 Rh3BG205900 Rh4AG404400 Rh4BG415500 Rh5AG455200 Rh5AG455600 Rh5CG497000 Rh5CG497200 Rh7AG228800 Rh7AG230400 Rh7AG230800 Rh7AG231200 Rh7AG231600 Rh7AG231800 Rh7AG232100 Rh7AG241600 Rh7BG236200 Rh7CG238200 Rh7CG239100 Rh7CG243400 Rh7CG244900
rosa_wichuraiana Rw0G023040 Rw1G017780 Rw1G022320 Rw1G022340 Rw1G022410 Rw1G022420 Rw1G022440 Rw1G022460 Rw1G022490 Rw1G022500 Rw1G022530 Rw1G022550 Rw1G022560 Rw1G022600 Rw1G023060 Rw1G038150 Rw1G038160 Rw2G008210 Rw2G022350 Rw2G029290 Rw4G015050 Rw4G019850 Rw5G024060 Rw5G042460 Rw7G019160 Rw7G019460 Rw7G019690 Rw7G019830 Rw7G019860 Rw7G019880 Rw7G019890 Rw7G019930 Rw7G019990 Rw7G020460 Rw7G025100 Rw7G025120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 2659
AccB1I GGYRCC 1 cut(s) 111
AccBSI CCGCTC 1 cut(s) 1059
AccI GTMKAC 2 cut(s) 234, 2303
AciI CCGC 7 cut(s) 287, 474, 1059, 1203, 1274, 1405, 2690
AclI AACGTT 2 cut(s) 1574, 1895
AclWI GGATC 4 cut(s) 988, 1689, 2152, 2612
AcoI YGGCCR 3 cut(s) 82, 253, 299
AcuI CTGAAG 2 cut(s) 1632, 2067
AcyI GRCGYC 1 cut(s) 2656
AfaI GTAC 3 cut(s) 1244, 1954, 2599
AfiI CCNNNNNNNGG 3 cut(s) 1871, 2286, 2456
AflIII ACRYGT 1 cut(s) 1473
AhdI GACNNNNNGTC 2 cut(s) 1808, 2549
AjnI CCWGG 4 cut(s) 156, 301, 543, 1777
AloI GAACNNNNNNTCC 2 cut(s) 1599, 1631
Alw26I GTCTC 4 cut(s) 147, 1557, 1795, 2128
AlwI GGATC 4 cut(s) 988, 1689, 2152, 2612
AlwNI CAGNNNCTG 1 cut(s) 2006
AoxI GGCC 5 cut(s) 82, 253, 299, 1421, 2235
AspS9I GGNCC 3 cut(s) 547, 1421, 1643
AsuC2I CCSGG 2 cut(s) 340, 998
AsuHPI GGTGA 8 cut(s) 172, 301, 317, 328, 425, 1291, 1720, 2594
AvaII GGWCC 2 cut(s) 547, 1643
BalI TGGCCA 1 cut(s) 301
BanI GGYRCC 1 cut(s) 111
BanII GRGCYC 1 cut(s) 2403
BbsI GAAGAC 3 cut(s) 635, 939, 2018
BccI CCATC 4 cut(s) 216, 981, 2103, 2216
BciT130I CCWGG 4 cut(s) 158, 303, 545, 1779
BclI TGATCA 2 cut(s) 166, 970
BcnI CCSGG 2 cut(s) 340, 998
BcoDI GTCTC 4 cut(s) 147, 1557, 1795, 2128
BfaI CTAG 9 cut(s) 116, 314, 389, 714, 1188, 1817, 2099, 2327, 2474
BfmI CTRYAG 1 cut(s) 1542
BglII AGATCT 6 cut(s) 316, 391, 1036, 1180, 1546, 2535
Bme1390I CCNGG 6 cut(s) 158, 303, 340, 545, 998, 1779
Bme18I GGWCC 2 cut(s) 547, 1643
BmeRI GACNNNNNGTC 2 cut(s) 1808, 2549
BmgT120I GGNCC 3 cut(s) 547, 1421, 1643
BmiI GGNNCC 4 cut(s) 113, 518, 1374, 1422
BmrFI CCNGG 6 cut(s) 158, 303, 340, 545, 998, 1779
BmrI ACTGGG 2 cut(s) 2373, 2445
BmsI GCATC 2 cut(s) 121, 2263
BmuI ACTGGG 2 cut(s) 2373, 2445
BoxI GACNNNNGTC 1 cut(s) 1231
BpiI GAAGAC 3 cut(s) 635, 939, 2018
BpmI CTGGAG 5 cut(s) 1003, 1800, 1819, 2433, 2591
Bpu10I CCTNAGC 1 cut(s) 1397
BpuEI CTTGAG 2 cut(s) 649, 1978
BpuMI CCSGG 2 cut(s) 340, 998
BsaBI GATNNNNATC 3 cut(s) 171, 975, 1179
BsaHI GRCGYC 1 cut(s) 2656
BsaI GGTCTC 1 cut(s) 147
BsaXI ACNNNNNCTCC 2 cut(s) 1599, 1629
Bsc4I CCNNNNNNNGG 3 cut(s) 1871, 2286, 2456
Bse118I RCCGGY 1 cut(s) 251
Bse1I ACTGG 5 cut(s) 288, 1020, 2368, 2440, 2599
Bse8I GATNNNNATC 3 cut(s) 171, 975, 1179
BseBI CCWGG 4 cut(s) 158, 303, 545, 1779
BseGI GGATG 6 cut(s) 136, 996, 1880, 1937, 2125, 2275
BseJI GATNNNNATC 3 cut(s) 171, 975, 1179
BseLI CCNNNNNNNGG 3 cut(s) 1871, 2286, 2456
BseMII CTCAG 7 cut(s) 34, 334, 542, 1314, 2223, 2546, 2615
BseNI ACTGG 5 cut(s) 288, 1020, 2368, 2440, 2599
BseRI GAGGAG 1 cut(s) 639
BseYI CCCAGC 1 cut(s) 851
BshFI GGCC 5 cut(s) 84, 255, 301, 1423, 2237
BshNI GGYRCC 1 cut(s) 111
BsiSI CCGG 4 cut(s) 252, 339, 998, 2634
BslFI GGGAC 1 cut(s) 1988
BslI CCNNNNNNNGG 3 cut(s) 1871, 2286, 2456
BsmAI GTCTC 4 cut(s) 147, 1557, 1795, 2128
BsmFI GGGAC 1 cut(s) 1988
BsmI GAATGC 1 cut(s) 2729
BsnI GGCC 5 cut(s) 84, 255, 301, 1423, 2237
Bso31I GGTCTC 1 cut(s) 147
Bsp1286I GDGCHC 1 cut(s) 2403
Bsp1407I TGTACA 1 cut(s) 1952
BspACI CCGC 7 cut(s) 287, 474, 1059, 1203, 1274, 1405, 2690
BspANI GGCC 5 cut(s) 84, 255, 301, 1423, 2237
BspCNI CTCAG 7 cut(s) 33, 333, 543, 1313, 2224, 2545, 2614
BspLI GGNNCC 4 cut(s) 113, 518, 1374, 1422
BspPI GGATC 4 cut(s) 988, 1689, 2152, 2612
BspT107I GGYRCC 1 cut(s) 111
BspTNI GGTCTC 1 cut(s) 147
BsrBI CCGCTC 1 cut(s) 1059
BsrFI RCCGGY 1 cut(s) 251
BsrGI TGTACA 1 cut(s) 1952
BsrI ACTGG 5 cut(s) 288, 1020, 2368, 2440, 2599
BssAI RCCGGY 1 cut(s) 251
BssNI GRCGYC 1 cut(s) 2656
Bst2UI CCWGG 4 cut(s) 158, 303, 545, 1779
Bst4CI ACNGT 3 cut(s) 239, 1220, 1230
Bst6I CTCTTC 4 cut(s) 187, 796, 1313, 2285
BstACI GRCGYC 1 cut(s) 2656
BstAPI GCANNNNNTGC 1 cut(s) 140
BstAUI TGTACA 1 cut(s) 1952
BstC8I GCNNGC 2 cut(s) 1403, 2104
BstEII GGTNACC 1 cut(s) 365
BstF5I GGATG 6 cut(s) 136, 996, 1880, 1937, 2125, 2275
BstMAI GTCTC 4 cut(s) 147, 1557, 1795, 2128
BstMWI GCNNNNNNNGC 2 cut(s) 55, 140
BstNI CCWGG 4 cut(s) 158, 303, 545, 1779
BstNSI RCATGY 2 cut(s) 29, 1477
BstPAI GACNNNNGTC 1 cut(s) 1231
BstPI GGTNACC 1 cut(s) 365
BstSCI CCNGG 6 cut(s) 156, 301, 338, 543, 996, 1777
BstSFI CTRYAG 1 cut(s) 1542
BstV2I GAAGAC 3 cut(s) 635, 939, 2018
BstX2I RGATCY 8 cut(s) 316, 391, 1036, 1180, 1546, 1681, 2144, 2535
BstXI CCANNNNNNTGG 4 cut(s) 806, 1636, 1778, 1797
BstYI RGATCY 8 cut(s) 316, 391, 1036, 1180, 1546, 1681, 2144, 2535
BsuRI GGCC 5 cut(s) 84, 255, 301, 1423, 2237
BtsCI GGATG 6 cut(s) 136, 996, 1880, 1937, 2125, 2275
BtsIMutI CAGTG 1 cut(s) 1609
Cac8I GCNNGC 2 cut(s) 1403, 2104
CaiI CAGNNNCTG 1 cut(s) 2006
Cfr10I RCCGGY 1 cut(s) 251
Cfr13I GGNCC 3 cut(s) 547, 1421, 1643
CseI GACGC 1 cut(s) 1659
CsiI ACCWGGT 1 cut(s) 156
Csp6I GTAC 3 cut(s) 1243, 1953, 2598
CspCI CAANNNNNGTGG 2 cut(s) 2488, 2523
CviQI GTAC 3 cut(s) 1243, 1953, 2598
DraI TTTAAA 3 cut(s) 537, 762, 2731
DriI GACNNNNNGTC 2 cut(s) 1808, 2549
EaeI YGGCCR 3 cut(s) 82, 253, 299
Eam1104I CTCTTC 4 cut(s) 187, 796, 1313, 2285
Eam1105I GACNNNNNGTC 2 cut(s) 1808, 2549
EarI CTCTTC 4 cut(s) 187, 796, 1313, 2285
Eco24I GRGCYC 1 cut(s) 2403
Eco31I GGTCTC 1 cut(s) 147
Eco32I GATATC 1 cut(s) 386
Eco47I GGWCC 2 cut(s) 547, 1643
Eco57I CTGAAG 2 cut(s) 1632, 2067
Eco91I GGTNACC 1 cut(s) 365
EcoO65I GGTNACC 1 cut(s) 365
EcoRI GAATTC 2 cut(s) 1065, 1349
EcoRII CCWGG 4 cut(s) 156, 301, 543, 1777
EcoRV GATATC 1 cut(s) 386
EcoT22I ATGCAT 1 cut(s) 2708
EcoT38I GRGCYC 1 cut(s) 2403
FalI AAGNNNNNCTT 6 cut(s) 559, 591, 1605, 1637, 2065, 2097
FaqI GGGAC 1 cut(s) 1988
FauI CCCGC 2 cut(s) 467, 1267
FbaI TGATCA 2 cut(s) 166, 970
FblI GTMKAC 2 cut(s) 234, 2303
FokI GGATG 6 cut(s) 143, 1003, 1887, 1924, 2132, 2282
FriOI GRGCYC 1 cut(s) 2403
FspBI CTAG 9 cut(s) 116, 314, 389, 714, 1188, 1817, 2099, 2327, 2474
GsaI CCCAGC 1 cut(s) 855
GsuI CTGGAG 5 cut(s) 1003, 1800, 1819, 2433, 2591
HaeIII GGCC 5 cut(s) 84, 255, 301, 1423, 2237
HapII CCGG 4 cut(s) 252, 339, 998, 2634
HgaI GACGC 1 cut(s) 1659
Hin1I GRCGYC 1 cut(s) 2656
HincII GTYRAC 1 cut(s) 266
HindII GTYRAC 1 cut(s) 266
HindIII AAGCTT 4 cut(s) 874, 1399, 1957, 2667
HinfI GANTC 8 cut(s) 231, 814, 1264, 1582, 2131, 2371, 2477, 2515
HpaII CCGG 4 cut(s) 252, 339, 998, 2634
HphI GGTGA 8 cut(s) 172, 301, 317, 328, 425, 1291, 1720, 2594
Hpy166II GTNNAC 8 cut(s) 235, 266, 308, 1880, 2078, 2304, 2654, 2660
Hpy8I GTNNAC 8 cut(s) 235, 266, 308, 1880, 2078, 2304, 2654, 2660
Hpy99I CGWCG 1 cut(s) 109
HpyCH4III ACNGT 3 cut(s) 239, 1220, 1230
HpyCH4IV ACGT 4 cut(s) 99, 1574, 1895, 2656
HpyCH4V TGCA 9 cut(s) 35, 58, 134, 219, 457, 2185, 2276, 2352, 2706
HpyF10VI GCNNNNNNNGC 2 cut(s) 55, 140
HpySE526I ACGT 4 cut(s) 99, 1574, 1895, 2656
Hsp92I GRCGYC 1 cut(s) 2656
Ksp22I TGATCA 2 cut(s) 166, 970
LmnI GCTCC 6 cut(s) 342, 522, 609, 1607, 1908, 2610
LweI GCATC 2 cut(s) 121, 2263
MabI ACCWGGT 1 cut(s) 156
MaeI CTAG 9 cut(s) 116, 314, 389, 714, 1188, 1817, 2099, 2327, 2474
MaeII ACGT 4 cut(s) 99, 1574, 1895, 2656
MaeIII GTNAC 7 cut(s) 100, 239, 365, 855, 1708, 1835, 2469
MbiI CCGCTC 1 cut(s) 1059
MfeI CAATTG 3 cut(s) 42, 1385, 2645
MflI RGATCY 8 cut(s) 316, 391, 1036, 1180, 1546, 1681, 2144, 2535
MhlI GDGCHC 1 cut(s) 2403
MlsI TGGCCA 1 cut(s) 301
MluNI TGGCCA 1 cut(s) 301
MlyI GAGTC 2 cut(s) 240, 1591
MmeI TCCRAC 7 cut(s) 677, 711, 819, 1617, 1653, 2543, 2615
Mox20I TGGCCA 1 cut(s) 301
Mph1103I ATGCAT 1 cut(s) 2708
MscI TGGCCA 1 cut(s) 301
MslI CAYNNNNRTG 2 cut(s) 30, 90
Msp20I TGGCCA 1 cut(s) 301
MspA1I CMGCKG 1 cut(s) 247
MspI CCGG 4 cut(s) 252, 339, 998, 2634
MspR9I CCNGG 6 cut(s) 158, 303, 340, 545, 998, 1779
MunI CAATTG 3 cut(s) 42, 1385, 2645
Mva1269I GAATGC 1 cut(s) 2729
MvaI CCWGG 4 cut(s) 158, 303, 545, 1779
MwoI GCNNNNNNNGC 2 cut(s) 55, 140
NciI CCSGG 2 cut(s) 340, 998
NlaIV GGNNCC 4 cut(s) 113, 518, 1374, 1422
NmeAIII GCCGAG 2 cut(s) 60, 450
NmuCI GTSAC 5 cut(s) 100, 239, 855, 1708, 2469
NsiI ATGCAT 1 cut(s) 2708
NspI RCATGY 2 cut(s) 29, 1477
PciI ACATGT 1 cut(s) 1473
PctI GAATGC 1 cut(s) 2729
PfeI GAWTC 6 cut(s) 814, 1264, 2131, 2371, 2477, 2515
PfoI TCCNGGA 2 cut(s) 996, 1777
PleI GAGTC 2 cut(s) 239, 1590
PpsI GAGTC 2 cut(s) 239, 1590
PscI ACATGT 1 cut(s) 1473
PshAI GACNNNNGTC 1 cut(s) 1231
Psp1406I AACGTT 2 cut(s) 1574, 1895
Psp6I CCWGG 4 cut(s) 156, 301, 543, 1777
PspEI GGTNACC 1 cut(s) 365
PspFI CCCAGC 1 cut(s) 851
PspGI CCWGG 4 cut(s) 156, 301, 543, 1777
PspN4I GGNNCC 4 cut(s) 113, 518, 1374, 1422
PspPI GGNCC 3 cut(s) 547, 1421, 1643
PsrI GAACNNNNNNTAC 2 cut(s) 2287, 2319
PstNI CAGNNNCTG 1 cut(s) 2006
PsuI RGATCY 8 cut(s) 316, 391, 1036, 1180, 1546, 1681, 2144, 2535
PvuII CAGCTG 1 cut(s) 247
RsaI GTAC 3 cut(s) 1244, 1954, 2599
RsaNI GTAC 3 cut(s) 1243, 1953, 2598
RseI CAYNNNNRTG 2 cut(s) 30, 90
Sau96I GGNCC 3 cut(s) 547, 1421, 1643
SchI GAGTC 2 cut(s) 240, 1591
ScrFI CCNGG 6 cut(s) 158, 303, 340, 545, 998, 1779
SduI GDGCHC 1 cut(s) 2403
SexAI ACCWGGT 1 cut(s) 156
SfaNI GCATC 2 cut(s) 121, 2263
SfcI CTRYAG 1 cut(s) 1542
SinI GGWCC 2 cut(s) 547, 1643
SmiI ATTTAAAT 1 cut(s) 762
SmiMI CAYNNNNRTG 2 cut(s) 30, 90
SmlI CTYRAG 2 cut(s) 628, 1993
SmoI CTYRAG 2 cut(s) 628, 1993
SsiI CCGC 7 cut(s) 287, 474, 1059, 1203, 1274, 1405, 2690
SspI AATATT 2 cut(s) 741, 1457
SspMI CTAG 9 cut(s) 116, 314, 389, 714, 1188, 1817, 2099, 2327, 2474
StyD4I CCNGG 6 cut(s) 156, 301, 338, 543, 996, 1777
SwaI ATTTAAAT 1 cut(s) 762
TaaI ACNGT 3 cut(s) 239, 1220, 1230
TaiI ACGT 4 cut(s) 102, 1577, 1898, 2659
TaqI TCGA 6 cut(s) 1538, 1618, 1730, 1827, 2163, 2494
TatI WGTACW 2 cut(s) 1242, 1952
TfiI GAWTC 6 cut(s) 814, 1264, 2131, 2371, 2477, 2515
TscAI CASTG 1 cut(s) 1609
TseFI GTSAC 5 cut(s) 100, 239, 855, 1708, 2469
Tsp45I GTSAC 5 cut(s) 100, 239, 855, 1708, 2469
TspGWI ACGGA 2 cut(s) 414, 2610
TspRI CASTG 1 cut(s) 1609
VpaK11BI GGWCC 2 cut(s) 547, 1643
XbaI TCTAGA 4 cut(s) 388, 713, 1187, 1816
XceI RCATGY 2 cut(s) 29, 1477
XcmI CCANNNNNNNNNTGG 1 cut(s) 1512
XmiI GTMKAC 2 cut(s) 234, 2303
XspI CTAG 9 cut(s) 116, 314, 389, 714, 1188, 1817, 2099, 2327, 2474
ZraI GACGTC 1 cut(s) 2657
Zsp2I ATGCAT 1 cut(s) 2708
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.