MD01G1212500.v1.1

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr01
Physical Location & Seq
Reverse (-)
30591833 .. 30594724
2892 bp
Loading structure...
UTR
Exon/CDS
Intron
MD01G1212500.v1.1.491

Sequence Viewer

Length: 2892 bp
ATGTTGCTCACAATCATATATTCTGTCTTGTTCGCTCTTACATCTGCCAAATGCTGTCTGGGTGCTGGAATCAGTTCCAACATCAGGTGCTTACAAGCAGAAAAAACCGCTCTGCTTCAGTTCAAACAGGGCCTCATCGACGAGTCCAACGTTCTTGCCTCTTGGGAAACCGGCAAAGATTGTTGCGACTGGAGAGGAATCGCTTGCAACAACGAAACAGGTCATGTCGTCACACTAGATCTCTATTACAATTATTCTGATATTTCTAATGTTGGAACTCCTCTAAGTGGTGTGATTACTCCTCTACTTGAATTGCCATATCTAACTTACTTGGACCTCAGTTTCAATAATTTCCAAGGAGAAATTCCCAAGTTCATCGGTTCCTTGAGTCGATTGGAACAACTCAAACTAGCAGGTGCTAAACTTAGCGGACCAATTCCTCCCCAACTCGGAAATCTCTCTAGTTTGTATACTCTTGATCTTGCACGGAACTATGTCACATTCGAAAATCTCGAGTGGTTATCTCATCTTTCTTCTTTGAGGTACTTGAATATGTCGCGTCTTAATTTTTCCGAGGTTGTAAATTGGCCAGAATCTATAAGCAAACTCCCTTCACTTGTTGAGCTTCAGTTATCTTCGTGTAATCTTCCCAATGTTGAACTGAGTTCGCTTTCTTTTGTCAATTCTTCAAACTCTCTTCAAGTCCTTGAACTGTCAGATAATATTCTTGATCTTTCAATATTTTATTGGATGGCCAATGTCAGCACCAACCTTGTTCACATTGGTTTAGTTGGTGATCAGTTGCAAGGTCCCTTCCCAGATGTTTTTGCTAACATGGTTTCTCTCGTGTCTCTTGATCTCTTGTATAACAAACTTGAAGGAGGGATACCAAAATCATTTCGAAACCTATGCAGCTTAGAGTCGTTGAATTTAGAGGGAAACACACTTTCCGACAGACTTGAAGACTCTGTCGAAAACTTGTCTTGTGCTCAAGACACCCTCGAGTTCTTGTGTTTAAGTGGGAACCCGTTTTCGGGTTCTTGTCCTGACAACCTTACAAGATTTTCATCCTTGAAAGTATTGTACATTGATGGCACCAACGTAAGTGGATCTCTTCCAAAAAGTTTTCAGCCACTCTCTCAGCTAAGATCCTTGAGCCTATTAAGAAACCAGTTCACCGGATCACTGCCTGATTTTACAGGTCTTTCGTTGTTAAGGCAGTTATATGTCTCCCAAAATCAACTCAACGGATCTCTACCTGAGAGCATCGGCCAACTTTCCAACCTCGAAGATTTGGATCTTTCTTGGAATTCTTTAAATGGTGTCATAACTGAAGTGCACTTCTCCAATCTCTCCCGTTTAAACTTTTTGGAATTTTCCCATAATCCTTTGTCTTTCAACTTTAGCTTGGATTGGAATCCGCCTTTCCAAATCAAAACTCTAGGATTGTCCTCTTGCAAGGTTGGCCCTGCTTTTCCGAAATGGATTCAAACTCAGAAAAAACTTACTTCACTTTACATGGCTGATGCTGAGATTTCGGATTCTATACCTGATAAGTTTTGGGATCTGTCTACCAGCTTCGTCGAGTTAAACCTATCAATGAACCAAATCCATGGAAAGTTGCCAATTCTGTCAACAAAAAACCGCACCTTCTTTTCTTTTGACTTGTCATCTAATCTCTTGGACGGCCCACTTCCGCCGTTTCCTTCAAGTGTAGCCATCCTGCGTCTCTCCCAAAACATGTTTTCGGGACCCTTATCTTCCTTTTGCAAAACAGAAGCTCCAAACTTGTTTAATCTAGACCTTTCCGACAATCAGCTATCCGGCGAACTTCCTACTTGTTGGATGCAGTTTCGAAGTTTGTTCGTCTTGAACATGGCTAAGAATATTCTCTCCGGGAAAATTCCAAGCTCATTAGGCTACTTAAAAGATGTTGTATTGTTACGCTTACAGGATAACAAACTTTCGGGAGAATTGCCTTCTTTGGAGAACTGTACAGAATTAAGAGTTCTTGACCTCGGTGACAATAAGCTATCTGGAAAGATACCGACATGGATAGGCCCGAGCCTAACAAAGTTGCTGGTTCTTCGATTAAAGTCGAATGAGTTTTATGGAAACATACCTTTAAGTCTATGCAGTCTTCCTGCGCTTCATGTTTTGGACTTCTCCAAGAACAATCTATCCGGAGCCTTGCCCCATTGCCTCCCTAACATAACAGCTTTGTCTTCGATGTCCCCCGAGGTGGAGGACGACTCTGTATTTGGGTTTGTGCAACTGGTTTGGAAAGGAATATTGATTGAGTTTGGCGAAAATCTTAAGCTTTTGAGAAGCATTGACATTTCGAGCAACAAATTAAGCGGAGACATTCCAGAAAGTGTAACAAGCTTGTTGAAGTTGATTTCTCTGAACCTGTCAAGCAACAATTTTACTGGGGTGCTTCCTAACAACTTTGGTCAGCTGGAGATGTTAGAATCGCTTGATTTGTCACGAAACCAGATATCTGGTAGCATTCCTCCGAGTTTTTCGAGCTTACATTATCTTAGTGTCTTGGACTTGTCATACAACAACTTATCAGGAAGAATTCCCCTAAGTACTCAACTTCAAAGTTTTAATGCTTCTCAATTCACGGGAAATCTTGGACTTTGCGGGCAACCGCTCACACCAGAATGCCCGGGAGCTGTAACAACGGAAGATCCTGCAGTCCCTAATGGCAGTGGAAGTGAGAAGACCAAACAAGATGATGATGGTCTCATAAGCTTTGGATTTTATGTTAGCTTGGCGCTTGGATTTATCATAGGATTCTGGAGTGTTTGTGGTACTTTAGTTCTTAAGACGTCTTGGAGGTATGCCTATTTCCGGTTCTTTGATGATATAAAAGCTCGGATTATGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

964

Amino Acids

106.09

Weight (kDa)

4.9

Isoelectric Point (pI)

40.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 32 - 70 5.3e-12 Leucine rich repeat N-terminal domain
LRR_14 PF23598 104 - 303 2.1e-08 Leucine-rich repeat region
LRR_8 PF13855 257 - 316 1.3e-07 Leucine rich repeat
LRR_14 PF23598 334 - 506 1.3e-11 Leucine-rich repeat region
LRR_14 PF23598 772 - 854 7.7e-06 Leucine-rich repeat region
LRR_8 PF13855 775 - 833 8.7e-10 Leucine rich repeat
LRR_4 PF12799 823 - 861 7.5e-06 Leucine Rich repeats (2 copies)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000028)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g45420 FvH4_4g14031 FvH4_5g20780 FvH4_6g28530 FvH4_7g14020 FvH4_7g14030 FvH4_7g14040 FvH4_7g14050 FvH4_7g14060 FvH4_7g14070 FvH4_7g14090 FvH4_7g14110 FvH4_7g14140 FvH4_7g14450
malus_domestica MD00G1189100.v1.1 MD01G1018600.v1.1 MD01G1053800.v1.1 MD01G1053900.v1.1 MD01G1054000.v1.1 MD01G1054100.v1.1 MD01G1056700.v1.1 MD01G1057000.v1.1 MD01G1057300.v1.1 MD01G1057400.v1.1 MD01G1061600.v1.1 MD01G1061800.v1.1 MD01G1061900.v1.1 MD01G1062000.v1.1 MD01G1062400.v1.1 MD01G1062500.v1.1 MD01G1063200.v1.1 MD01G1063300.v1.1 MD01G1063400.v1.1 MD01G1063700.v1.1 MD01G1063900.v1.1 MD01G1064200.v1.1 MD01G1064300.v1.1 MD01G1064400.v1.1 MD01G1064600.v1.1 MD01G1064700.v1.1 MD01G1181100.v1.1 MD01G1212300.v1.1 MD01G1212500.v1.1 MD01G1212600.v1.1 MD02G1271900.v1.1 MD07G1136500.v1.1 MD07G1139300.v1.1 MD07G1141200.v1.1 MD07G1144700.v1.1 MD08G1144200.v1.1 MD14G1186300.v1.1 MD14G1186500.v1.1 MD14G1186700.v1.1 MD14G1186800.v1.1 MD15G1351300.v1.1 MD15G1439500.v1.1
prunus_persica Prupe.1G067000_v2.0.a1 Prupe.2G077400_v2.0.a1 Prupe.2G077700_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078600_v2.0.a1 Prupe.2G078800_v2.0.a1 Prupe.2G099600_v2.0.a1 Prupe.2G099700_v2.0.a1 Prupe.2G155100_v2.0.a1 Prupe.2G155500_v2.0.a1 Prupe.2G155600_v2.0.a1 Prupe.2G155800_v2.0.a1 Prupe.2G155900_v2.0.a1 Prupe.2G156100_v2.0.a1 Prupe.2G166100_v2.0.a1 Prupe.2G166300_v2.0.a1 Prupe.2G167500_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G168400_v2.0.a1 Prupe.2G168700_v2.0.a1 Prupe.2G168800_v2.0.a1 Prupe.2G169000_v2.0.a1 Prupe.2G169100_v2.0.a1 Prupe.2G169200_v2.0.a1 Prupe.2G169500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G172300_v2.0.a1 Prupe.2G304800_v2.0.a1 Prupe.4G264800_v2.0.a1 Prupe.4G265000_v2.0.a1 Prupe.5G051900_v2.0.a1 Prupe.5G052000_v2.0.a1
pyrus_communis pycom01g08380 pycom01g08430 pycom01g08490 pycom01g08520 pycom01g08540 pycom01g08550 pycom01g08600 pycom01g08630 pycom01g08660 pycom01g08720 pycom01g09180 pycom01g09200 pycom01g09210 pycom01g09270 pycom01g09280 pycom01g09300 pycom01g09380 pycom01g19110 pycom01g22260 pycom01g22310 pycom01g22330 pycom01g22350 pycom01g22360 pycom02g23250 pycom07g13420 pycom07g13670 pycom07g13900 pycom07g13910 pycom07g13960 pycom07g13970 pycom07g25680 pycom11g22830
rosa_chinensis RchiOBHm_Chr0c22g0500431 RchiOBHm_Chr0c22g0500441 RchiOBHm_Chr0c22g0500561 RchiOBHm_Chr0c22g0500571 RchiOBHm_Chr0c22g0500611 RchiOBHm_Chr0c22g0500621 RchiOBHm_Chr0c22g0500631 RchiOBHm_Chr0c22g0500681 RchiOBHm_Chr1g0348221 RchiOBHm_Chr1g0348251 RchiOBHm_Chr1g0352861 RchiOBHm_Chr1g0352871 RchiOBHm_Chr1g0352891 RchiOBHm_Chr1g0352901 RchiOBHm_Chr1g0354671 RchiOBHm_Chr1g0354701 RchiOBHm_Chr1g0354711 RchiOBHm_Chr1g0354751 RchiOBHm_Chr1g0354761 RchiOBHm_Chr1g0354841 RchiOBHm_Chr1g0354851 RchiOBHm_Chr1g0354881 RchiOBHm_Chr1g0354971 RchiOBHm_Chr1g0354981 RchiOBHm_Chr1g0354991 RchiOBHm_Chr1g0355001 RchiOBHm_Chr1g0355011 RchiOBHm_Chr1g0355021 RchiOBHm_Chr1g0355861 RchiOBHm_Chr1g0379671 RchiOBHm_Chr1g0379681 RchiOBHm_Chr2g0096591 RchiOBHm_Chr2g0132821 RchiOBHm_Chr3g0454901 RchiOBHm_Chr3g0472711 RchiOBHm_Chr4g0400791 RchiOBHm_Chr5g0069481 RchiOBHm_Chr5g0069511 RchiOBHm_Chr5g0069551 RchiOBHm_Chr6g0254651 RchiOBHm_Chr6g0259721 RchiOBHm_Chr7g0205911 RchiOBHm_Chr7g0206401 RchiOBHm_Chr7g0206571 RchiOBHm_Chr7g0206581 RchiOBHm_Chr7g0206621 RchiOBHm_Chr7g0206631 RchiOBHm_Chr7g0206641 RchiOBHm_Chr7g0206681 RchiOBHm_Chr7g0206691 RchiOBHm_Chr7g0206751 RchiOBHm_Chr7g0206761 RchiOBHm_Chr7g0206851 RchiOBHm_Chr7g0206911 RchiOBHm_Chr7g0206921 RchiOBHm_Chr7g0207001 RchiOBHm_Chr7g0207011 RchiOBHm_Chr7g0207031 RchiOBHm_Chr7g0207101 RchiOBHm_Chr7g0207161 RchiOBHm_Chr7g0207201 RchiOBHm_Chr7g0207271 RchiOBHm_Chr7g0207301 RchiOBHm_Chr7g0207311 RchiOBHm_Chr7g0207421 RchiOBHm_Chr7g0207481 RchiOBHm_Chr7g0207491 RchiOBHm_Chr7g0207501 RchiOBHm_Chr7g0207521 RchiOBHm_Chr7g0207531 RchiOBHm_Chr7g0207561 RchiOBHm_Chr7g0207571 RchiOBHm_Chr7g0207581 RchiOBHm_Chr7g0207601 RchiOBHm_Chr7g0207621 RchiOBHm_Chr7g0207631 RchiOBHm_Chr7g0207651 RchiOBHm_Chr7g0207661 RchiOBHm_Chr7g0207711 RchiOBHm_Chr7g0207761 RchiOBHm_Chr7g0207801 RchiOBHm_Chr7g0208821 RchiOBHm_Chr7g0208831 RchiOBHm_Chr7g0208841 RchiOBHm_Chr7g0213601 RchiOBHm_Chr7g0215981 RchiOBHm_Chr7g0216021
rosa_laevigata RLG00000003193 RLG00000003194 RLG00000003287 RLG00000003288 RLG00000003289 RLG00000003293 RLG00000003294 RLG00000003295 RLG00000003297 RLG00000003299 RLG00000003301 RLG00000003327 RLG00000003347 RLG00000016653 RLG00000018642 RLG00000018643 RLG00000019285 RLG00000022542 RLG00000026368 RLG00000026371 RLG00000028124 RLG00000028125 RLG00000028183 RLG00000028184 RLG00000028185 RLG00000028188 RLG00000028673 RLG00000029267 RLG00000029325 RLG00000029674 RLG00000032883 RLG00000036055 RLG00000036058 RLG00000036065 RLG00000036068 RLG00000036071 RLG00000036072 RLG00000036075 RLG00000036076
rosa_multiflora Rmu_co8250183.1_g000001 Rmu_co8271981.1_g000001 Rmu_co8410829.1_g000001 Rmu_co8432879.1_g000001 Rmu_co8441941.1_g000001 Rmu_sc0000076.1_g000031 Rmu_sc0000738.1_g000038 Rmu_sc0000848.1_g000003 Rmu_sc0000848.1_g000014 Rmu_sc0000848.1_g000015 Rmu_sc0000848.1_g000016 Rmu_sc0001264.1_g000001 Rmu_sc0002284.1_g000018 Rmu_sc0002356.1_g000011 Rmu_sc0003020.1_g000003 Rmu_sc0003115.1_g000001 Rmu_sc0003115.1_g000002 Rmu_sc0003115.1_g000003 Rmu_sc0003115.1_g000004 Rmu_sc0003115.1_g000005 Rmu_sc0003115.1_g000008 Rmu_sc0003115.1_g000010 Rmu_sc0003115.1_g000011 Rmu_sc0003115.1_g000014 Rmu_sc0003565.1_g000002 Rmu_sc0003652.1_g000013 Rmu_sc0003652.1_g000015 Rmu_sc0003652.1_g000016 Rmu_sc0003652.1_g000019 Rmu_sc0003940.1_g000001 Rmu_sc0003940.1_g000004 Rmu_sc0003940.1_g000009 Rmu_sc0004084.1_g000010 Rmu_sc0004705.1_g000021 Rmu_sc0004972.1_g000007 Rmu_sc0004987.1_g000002 Rmu_sc0004987.1_g000006 Rmu_sc0005065.1_g000018 Rmu_sc0005065.1_g000029 Rmu_sc0005391.1_g000002 Rmu_sc0005633.1_g000003 Rmu_sc0005633.1_g000008 Rmu_sc0006632.1_g000014 Rmu_sc0006632.1_g000018 Rmu_sc0006681.1_g000010 Rmu_sc0006681.1_g000011 Rmu_sc0006733.1_g000003 Rmu_sc0007385.1_g000005 Rmu_sc0007385.1_g000007 Rmu_sc0007385.1_g000009 Rmu_sc0007385.1_g000016 Rmu_sc0007645.1_g000002 Rmu_sc0007645.1_g000003 Rmu_sc0007645.1_g000022 Rmu_sc0007828.1_g000008 Rmu_sc0008509.1_g000003 Rmu_sc0008509.1_g000015 Rmu_sc0008509.1_g000016 Rmu_sc0008509.1_g000020 Rmu_sc0008509.1_g000030 Rmu_sc0008509.1_g000041 Rmu_sc0008756.1_g000001 Rmu_sc0008756.1_g000003 Rmu_sc0013028.1_g000002 Rmu_sc0013028.1_g000003 Rmu_sc0013028.1_g000005 Rmu_sc0013160.1_g000001 Rmu_sc0014454.1_g000009 Rmu_sc0014455.1_g000007 Rmu_sc0014659.1_g000004 Rmu_sc0017798.1_g000002 Rmu_sc0017798.1_g000004 Rmu_sc0029608.1_g000001 Rmu_sc0037861.1_g000001 Rmu_sc0038750.1_g000001 Rmu_sc0042995.1_g000001 Rmu_ssc0000161.1_g000017
rosa_roxburghii Rroxscaffold_1G00009180 Rroxscaffold_1G00009190 Rroxscaffold_1G00011450 Rroxscaffold_1G00011480 Rroxscaffold_2G00111660 Rroxscaffold_2G00113570 Rroxscaffold_2G00122140 Rroxscaffold_3G00243730 Rroxscaffold_3G00245750 Rroxscaffold_3G00245760 Rroxscaffold_3G00250220 Rroxscaffold_3G00251160 Rroxscaffold_3G00251270 Rroxscaffold_3G00251280 Rroxscaffold_3G00251300 Rroxscaffold_3G00251340 Rroxscaffold_3G00251350 Rroxscaffold_3G00251390 Rroxscaffold_3G00251400 Rroxscaffold_3G00251560 Rroxscaffold_3G00251570 Rroxscaffold_3G00251870 Rroxscaffold_3G00252200 Rroxscaffold_3G00252210 Rroxscaffold_4G00279970 Rroxscaffold_4G00299970 Rroxscaffold_4G00300760 Rroxscaffold_4G00300780 Rroxscaffold_4G00300810 Rroxscaffold_4G00300850 Rroxscaffold_4G00307080 Rroxscaffold_4G00307100 Rroxscaffold_4G00313990 Rroxscaffold_6G00405080
rosa_rugosa Rorug01G0193600 Rorug01G0193700 Rorug01G0243800 Rorug01G0244000 Rorug01G0244000 Rorug01G0244400 Rorug01G0414300.1 Rorug01G0414500 Rorug01G0414600 Rorug02G0235600 Rorug02G0307900 Rorug02G0583100 Rorug02G0583200 Rorug02G0583300 Rorug05G0398000 Rorug05G0398100 Rorug05G0398200 Rorug05G0580300 Rorug05G0590300 Rorug06G0116000 Rorug06G0116100 Rorug07G0096800 Rorug07G0097100.1 Rorug07G0097200 Rorug07G0098600 Rorug07G0098600 Rorug07G0098700 Rorug07G0099100 Rorug07G0106100 Rorug07G0106200 Rorug07G0106200 Rorug07G0106300 Rorug07G0157600 Rorug07G0157700 Rorug07G0157700 Rorug07G0157800
rosa_samantha Rh1AG255500 Rh1AG256700 Rh1BG225800 Rh1BG226200 Rh1BG230000 Rh1CG195300 Rh1CG238400 Rh1CG238500 Rh1CG238900 Rh1CG239000 Rh1CG239300 Rh1CG239400 Rh1CG239800 Rh1CG240000 Rh1CG240200 Rh1CG240300 Rh1CG244300 Rh1CG406900 Rh1CG407300 Rh1CG407400 Rh2CG343600 Rh2DG383200 Rh3BG205900 Rh4AG404400 Rh4BG415500 Rh5AG455200 Rh5AG455600 Rh5CG497000 Rh5CG497200 Rh7AG228800 Rh7AG230400 Rh7AG230800 Rh7AG231200 Rh7AG231600 Rh7AG231800 Rh7AG232100 Rh7AG241600 Rh7BG236200 Rh7CG238200 Rh7CG239100 Rh7CG243400 Rh7CG244900
rosa_wichuraiana Rw0G023040 Rw1G017780 Rw1G022320 Rw1G022340 Rw1G022410 Rw1G022420 Rw1G022440 Rw1G022460 Rw1G022490 Rw1G022500 Rw1G022530 Rw1G022550 Rw1G022560 Rw1G022600 Rw1G023060 Rw1G038150 Rw1G038160 Rw2G008210 Rw2G022350 Rw2G029290 Rw4G015050 Rw4G019850 Rw5G024060 Rw5G042460 Rw7G019160 Rw7G019460 Rw7G019690 Rw7G019830 Rw7G019860 Rw7G019880 Rw7G019890 Rw7G019930 Rw7G019990 Rw7G020460 Rw7G025100 Rw7G025120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 404
AatII GACGTC 1 cut(s) 2837
Acc36I ACCTGC 1 cut(s) 404
AccB1I GGYRCC 1 cut(s) 1094
AccBSI CCGCTC 2 cut(s) 110, 2656
AccI GTMKAC 2 cut(s) 470, 1571
AccII CGCG 1 cut(s) 559
AccIII TCCGGA 1 cut(s) 2183
AciI CCGC 8 cut(s) 108, 429, 1421, 1645, 1697, 2358, 2646, 2654
AclI AACGTT 1 cut(s) 150
AclWI GGATC 7 cut(s) 1117, 1143, 1189, 1258, 1305, 1572, 2687
AcoI YGGCCR 3 cut(s) 587, 753, 1270
AcsI RAATTY 6 cut(s) 363, 928, 1309, 1373, 1902, 2580
AcuI CTGAAG 3 cut(s) 101, 611, 1353
AcyI GRCGYC 1 cut(s) 2834
AfaI GTAC 5 cut(s) 545, 1085, 1996, 2593, 2818
AfiI CCNNNNNNNGG 7 cut(s) 84, 287, 449, 1033, 1034, 2242, 2856
AflII CTTAAG 2 cut(s) 2315, 2828
AflIII ACRYGT 1 cut(s) 1740
AjuI GAANNNNNNNTTGG 2 cut(s) 348, 380
AloI GAACNNNNNNTCC 2 cut(s) 2165, 2197
Alw21I GWGCWC 2 cut(s) 991, 1341
Alw26I GTCTC 5 cut(s) 855, 1234, 1733, 2355, 2753
Alw44I GTGCAC 1 cut(s) 1337
AlwI GGATC 7 cut(s) 1117, 1143, 1189, 1258, 1305, 1572, 2687
Ama87I CYCGRG 5 cut(s) 512, 1001, 2062, 2237, 2671
Aor13HI TCCGGA 1 cut(s) 2183
AoxI GGCC 7 cut(s) 130, 587, 753, 1270, 1465, 1687, 2059
ApaLI GTGCAC 1 cut(s) 1337
ApeKI GCWGC 1 cut(s) 912
ApoI RAATTY 6 cut(s) 363, 928, 1309, 1373, 1902, 2580
ArsI GACNNNNNNTTYG 2 cut(s) 2243, 2275
Asp700I GAANNNNTTC 1 cut(s) 73
AspLEI GCGC 2 cut(s) 2149, 2782
AspS9I GGNCC 8 cut(s) 130, 334, 431, 809, 1466, 1688, 1751, 2060
AsuC2I CCSGG 3 cut(s) 1897, 2672, 2673
AsuHPI GGTGA 3 cut(s) 806, 1168, 2033
AsuII TTCGAA 3 cut(s) 504, 901, 1855
AvaI CYCGRG 5 cut(s) 512, 1001, 2062, 2237, 2671
AvaII GGWCC 4 cut(s) 334, 431, 809, 1751
BaeGI GKGCMC 1 cut(s) 1341
BaeI ACNNNNGTAYC 2 cut(s) 2808, 2841
BalI TGGCCA 2 cut(s) 589, 755
BanI GGYRCC 1 cut(s) 1094
BarI GAAGNNNNNNTAC 2 cut(s) 870, 902
BauI CACGAG 1 cut(s) 845
BbsI GAAGAC 4 cut(s) 969, 2132, 2217, 2732
Bbv12I GWGCWC 2 cut(s) 991, 1341
BbvI GCAGC 1 cut(s) 924
BccI CCATC 4 cut(s) 745, 1085, 1727, 2738
BceAI ACGGC 2 cut(s) 1684, 1702
BcgI CGANNNNNNTGC 2 cut(s) 891, 925
BciVI GTATCC 1 cut(s) 879
BclI TGATCA 1 cut(s) 796
BcnI CCSGG 3 cut(s) 1897, 2672, 2673
BcoDI GTCTC 5 cut(s) 855, 1234, 1733, 2355, 2753
BfaI CTAG 5 cut(s) 236, 410, 462, 1442, 1799
BfmI CTRYAG 1 cut(s) 2697
BfoI RGCGCY 1 cut(s) 2783
BfrI CTTAAG 2 cut(s) 2315, 2828
BfuAI ACCTGC 1 cut(s) 404
BfuI GTATCC 1 cut(s) 879
BglII AGATCT 1 cut(s) 238
BisI GCNGC 1 cut(s) 913
BlsI GCNGC 1 cut(s) 914
BmcAI AGTACT 1 cut(s) 2593
Bme1390I CCNGG 3 cut(s) 1897, 2672, 2673
Bme18I GGWCC 4 cut(s) 334, 431, 809, 1751
BmeT110I CYCGRG 5 cut(s) 512, 1001, 2062, 2237, 2671
BmgT120I GGNCC 8 cut(s) 130, 334, 431, 809, 1466, 1688, 1751, 2060
BmiI GGNNCC 7 cut(s) 382, 811, 1025, 1096, 1752, 1753, 2188
BmrFI CCNGG 3 cut(s) 1897, 2672, 2673
BmrI ACTGGG 1 cut(s) 2439
BmsI GCATC 3 cut(s) 1275, 1516, 1836
BmuI ACTGGG 1 cut(s) 2439
BpiI GAAGAC 4 cut(s) 969, 2132, 2217, 2732
BplI GAGNNNNNCTC 2 cut(s) 2237, 2269
BpmI CTGGAG 3 cut(s) 211, 2480, 2824
Bpu14I TTCGAA 3 cut(s) 504, 901, 1855
BpuEI CTTGAG 3 cut(s) 406, 975, 1174
BpuMI CCSGG 3 cut(s) 1897, 2672, 2673
BsaBI GATNNNNATC 3 cut(s) 1066, 1296, 1416
BsaHI GRCGYC 1 cut(s) 2834
BsaI GGTCTC 1 cut(s) 2753
BsaJI CCNNGG 6 cut(s) 355, 573, 1612, 2017, 2238, 2671
BsaWI WCCGGW 3 cut(s) 1178, 2183, 2856
BsaXI ACNNNNNCTCC 4 cut(s) 1765, 1795, 2797, 2827
Bsc4I CCNNNNNNNGG 7 cut(s) 84, 287, 449, 1033, 1034, 2242, 2856
Bse118I RCCGGY 1 cut(s) 170
Bse1I ACTGG 4 cut(s) 194, 1171, 2280, 2434
Bse3DI GCAATG 1 cut(s) 2197
Bse8I GATNNNNATC 3 cut(s) 1066, 1296, 1416
BseAI TCCGGA 1 cut(s) 2183
BseDI CCNNGG 6 cut(s) 355, 573, 1612, 2017, 2238, 2671
BseGI GGATG 4 cut(s) 756, 1067, 1719, 1851
BseJI GATNNNNATC 3 cut(s) 1066, 1296, 1416
BseLI CCNNNNNNNGG 7 cut(s) 84, 287, 449, 1033, 1034, 2242, 2856
BseMI GCAATG 1 cut(s) 2197
BseMII CTCAG 6 cut(s) 352, 653, 1154, 1251, 1508, 1521
BseNI ACTGG 4 cut(s) 194, 1171, 2280, 2434
BseRI GAGGAG 2 cut(s) 270, 291
BseSI GKGCMC 1 cut(s) 1341
BseXI GCAGC 1 cut(s) 924
Bsh1236I CGCG 1 cut(s) 559
BshFI GGCC 7 cut(s) 132, 589, 755, 1272, 1467, 1689, 2061
BshNI GGYRCC 1 cut(s) 1094
BsiHKAI GWGCWC 2 cut(s) 991, 1341
BsiHKCI CYCGRG 5 cut(s) 512, 1001, 2062, 2237, 2671
BsiSI CCGG 7 cut(s) 171, 1179, 1824, 1896, 2184, 2672, 2857
BslFI GGGAC 4 cut(s) 795, 1764, 2218, 2687
BslI CCNNNNNNNGG 7 cut(s) 84, 287, 449, 1033, 1034, 2242, 2856
BsmAI GTCTC 5 cut(s) 855, 1234, 1733, 2355, 2753
BsmBI CGTCTC 1 cut(s) 1733
BsmFI GGGAC 4 cut(s) 795, 1764, 2218, 2687
BsmI GAATGC 2 cut(s) 2508, 2672
BsnI GGCC 7 cut(s) 132, 589, 755, 1272, 1467, 1689, 2061
Bso31I GGTCTC 1 cut(s) 2753
BsoBI CYCGRG 5 cut(s) 512, 1001, 2062, 2237, 2671
Bsp119I TTCGAA 3 cut(s) 504, 901, 1855
Bsp1286I GDGCHC 2 cut(s) 991, 1341
Bsp13I TCCGGA 1 cut(s) 2183
Bsp1407I TGTACA 2 cut(s) 1083, 1994
Bsp19I CCATGG 1 cut(s) 1612
BspACI CCGC 8 cut(s) 108, 429, 1421, 1645, 1697, 2358, 2646, 2654
BspANI GGCC 7 cut(s) 132, 589, 755, 1272, 1467, 1689, 2061
BspCNI CTCAG 6 cut(s) 351, 654, 1153, 1252, 1507, 1522
BspEI TCCGGA 1 cut(s) 2183
BspFNI CGCG 1 cut(s) 559
BspLI GGNNCC 7 cut(s) 382, 811, 1025, 1096, 1752, 1753, 2188
BspMAI CTGCAG 1 cut(s) 2701
BspMI ACCTGC 1 cut(s) 404
BspPI GGATC 7 cut(s) 1117, 1143, 1189, 1258, 1305, 1572, 2687
BspT104I TTCGAA 3 cut(s) 504, 901, 1855
BspT107I GGYRCC 1 cut(s) 1094
BspTI CTTAAG 2 cut(s) 2315, 2828
BspTNI GGTCTC 1 cut(s) 2753
BsrBI CCGCTC 2 cut(s) 110, 2656
BsrDI GCAATG 1 cut(s) 2197
BsrFI RCCGGY 1 cut(s) 170
BsrGI TGTACA 2 cut(s) 1083, 1994
BsrI ACTGG 4 cut(s) 194, 1171, 2280, 2434
BssAI RCCGGY 1 cut(s) 170
BssECI CCNNGG 6 cut(s) 355, 573, 1612, 2017, 2238, 2671
BssNAI GTATAC 1 cut(s) 471
BssNI GRCGYC 1 cut(s) 2834
BssSI CACGAG 1 cut(s) 845
BssT1I CCWWGG 2 cut(s) 355, 1612
Bst1107I GTATAC 1 cut(s) 471
Bst2BI CACGAG 1 cut(s) 845
Bst4CI ACNGT 2 cut(s) 714, 1994
Bst6I CTCTTC 2 cut(s) 702, 1119
BstACI GRCGYC 1 cut(s) 2834
BstAFI CTTAAG 2 cut(s) 2315, 2828
BstAUI TGTACA 2 cut(s) 1083, 1994
BstBI TTCGAA 3 cut(s) 504, 901, 1855
BstC8I GCNNGC 2 cut(s) 205, 2648
BstDSI CCRYGG 1 cut(s) 1612
BstF5I GGATG 4 cut(s) 756, 1067, 1719, 1851
BstFNI CGCG 1 cut(s) 559
BstH2I RGCGCY 1 cut(s) 2783
BstHHI GCGC 2 cut(s) 2149, 2782
BstMAI GTCTC 5 cut(s) 855, 1234, 1733, 2355, 2753
BstMWI GCNNNNNNNGC 2 cut(s) 1464, 1917
BstNSI RCATGY 1 cut(s) 1744
BstSCI CCNGG 3 cut(s) 1895, 2670, 2671
BstSFI CTRYAG 1 cut(s) 2697
BstSLI GKGCMC 1 cut(s) 1341
BstUI CGCG 1 cut(s) 559
BstV1I GCAGC 1 cut(s) 924
BstV2I GAAGAC 4 cut(s) 969, 2132, 2217, 2732
BstX2I RGATCY 7 cut(s) 238, 1109, 1148, 1250, 1297, 1564, 2692
BstXI CCANNNNNNTGG 2 cut(s) 1613, 2501
BstYI RGATCY 7 cut(s) 238, 1109, 1148, 1250, 1297, 1564, 2692
BstZ17I GTATAC 1 cut(s) 471
BsuI GTATCC 1 cut(s) 879
BsuRI GGCC 7 cut(s) 132, 589, 755, 1272, 1467, 1689, 2061
BtgI CCRYGG 1 cut(s) 1612
BtsCI GGATG 4 cut(s) 756, 1067, 1719, 1851
BtsI GCAGTG 2 cut(s) 1184, 2719
BtsIMutI CAGTG 2 cut(s) 1184, 2719
BveI ACCTGC 1 cut(s) 404
Cac8I GCNNGC 2 cut(s) 205, 2648
CfoI GCGC 2 cut(s) 2149, 2782
Cfr10I RCCGGY 1 cut(s) 170
Cfr13I GGNCC 8 cut(s) 130, 334, 431, 809, 1466, 1688, 1751, 2060
Cfr9I CCCGGG 1 cut(s) 2671
CseI GACGC 2 cut(s) 548, 1715
Csp6I GTAC 5 cut(s) 544, 1084, 1995, 2592, 2817
CspCI CAANNNNNGTGG 2 cut(s) 1087, 1122
CviAII CATG 8 cut(s) 224, 835, 1519, 1613, 1741, 1876, 2052, 2153
CviQI GTAC 5 cut(s) 544, 1084, 1995, 2592, 2817
DraI TTTAAA 2 cut(s) 1317, 1362
EaeI YGGCCR 3 cut(s) 587, 753, 1270
Eam1104I CTCTTC 2 cut(s) 702, 1119
EarI CTCTTC 2 cut(s) 702, 1119
EciI GGCGGA 2 cut(s) 1410, 1686
Eco130I CCWWGG 2 cut(s) 355, 1612
Eco31I GGTCTC 1 cut(s) 2753
Eco32I GATATC 1 cut(s) 2499
Eco47I GGWCC 4 cut(s) 334, 431, 809, 1751
Eco57I CTGAAG 3 cut(s) 101, 611, 1353
Eco88I CYCGRG 5 cut(s) 512, 1001, 2062, 2237, 2671
EcoO109I RGGNCCY 3 cut(s) 130, 809, 1751
EcoRI GAATTC 2 cut(s) 1309, 2580
EcoRV GATATC 1 cut(s) 2499
EcoT14I CCWWGG 2 cut(s) 355, 1612
ErhI CCWWGG 2 cut(s) 355, 1612
Esp3I CGTCTC 1 cut(s) 1733
FaeI CATG 8 cut(s) 227, 838, 1522, 1616, 1744, 1879, 2055, 2156
FaqI GGGAC 4 cut(s) 795, 1764, 2218, 2687
FatI CATG 8 cut(s) 223, 834, 1518, 1612, 1740, 1875, 2051, 2152
FauI CCCGC 1 cut(s) 2639
FbaI TGATCA 1 cut(s) 796
FblI GTMKAC 2 cut(s) 470, 1571
Fnu4HI GCNGC 1 cut(s) 913
FokI GGATG 4 cut(s) 763, 1054, 1706, 1858
Fsp4HI GCNGC 1 cut(s) 913
FspBI CTAG 5 cut(s) 236, 410, 462, 1442, 1799
GlaI GCGC 2 cut(s) 2148, 2781
GluI GCNGC 1 cut(s) 913
GsuI CTGGAG 3 cut(s) 211, 2480, 2824
HaeII RGCGCY 1 cut(s) 2783
HaeIII GGCC 7 cut(s) 132, 589, 755, 1272, 1467, 1689, 2061
HapII CCGG 7 cut(s) 171, 1179, 1824, 1896, 2184, 2672, 2857
HgaI GACGC 2 cut(s) 548, 1715
HhaI GCGC 2 cut(s) 2149, 2782
Hin1I GRCGYC 1 cut(s) 2834
Hin1II CATG 8 cut(s) 227, 838, 1522, 1616, 1744, 1879, 2055, 2156
Hin6I GCGC 2 cut(s) 2147, 2780
HinP1I GCGC 2 cut(s) 2147, 2780
HincII GTYRAC 1 cut(s) 1635
HindII GTYRAC 1 cut(s) 1635
HindIII AAGCTT 3 cut(s) 2318, 2383, 2755
HpaII CCGG 7 cut(s) 171, 1179, 1824, 1896, 2184, 2672, 2857
HphI GGTGA 3 cut(s) 806, 1168, 2033
Hpy166II GTNNAC 6 cut(s) 471, 778, 1176, 1339, 1572, 1635
Hpy8I GTNNAC 6 cut(s) 471, 778, 1176, 1339, 1572, 1635
Hpy99I CGWCG 2 cut(s) 143, 1586
HpyAV CCTTC 6 cut(s) 621, 823, 872, 1660, 1716, 1989
HpyCH4III ACNGT 2 cut(s) 714, 1994
HpyCH4IV ACGT 3 cut(s) 150, 1101, 2834
HpyF10VI GCNNNNNNNGC 2 cut(s) 1464, 1917
HpySE526I ACGT 3 cut(s) 150, 1101, 2834
Hsp92I GRCGYC 1 cut(s) 2834
Hsp92II CATG 8 cut(s) 227, 838, 1522, 1616, 1744, 1879, 2055, 2156
HspAI GCGC 2 cut(s) 2147, 2780
KflI GGGWCCC 1 cut(s) 1751
Kpn2I TCCGGA 1 cut(s) 2183
Ksp22I TGATCA 1 cut(s) 796
LmnI GCTCC 3 cut(s) 1786, 2186, 2675
Lsp1109I GCAGC 1 cut(s) 924
LweI GCATC 3 cut(s) 1275, 1516, 1836
MaeI CTAG 5 cut(s) 236, 410, 462, 1442, 1799
MaeII ACGT 3 cut(s) 150, 1101, 2834
MaeIII GTNAC 7 cut(s) 229, 496, 1941, 2021, 2377, 2484, 2680
MbiI CCGCTC 2 cut(s) 110, 2656
MflI RGATCY 7 cut(s) 238, 1109, 1148, 1250, 1297, 1564, 2692
MhlI GDGCHC 2 cut(s) 991, 1341
MlsI TGGCCA 2 cut(s) 589, 755
MluNI TGGCCA 2 cut(s) 589, 755
MlyI GAGTC 5 cut(s) 152, 397, 929, 959, 2246
MmeI TCCRAC 7 cut(s) 102, 171, 253, 975, 1305, 1823, 1833
Mox20I TGGCCA 2 cut(s) 589, 755
MroI TCCGGA 1 cut(s) 2183
MroXI GAANNNNTTC 1 cut(s) 73
MscI TGGCCA 2 cut(s) 589, 755
MslI CAYNNNNRTG 1 cut(s) 2665
Msp20I TGGCCA 2 cut(s) 589, 755
MspA1I CMGCKG 1 cut(s) 2458
MspCI CTTAAG 2 cut(s) 2315, 2828
MspI CCGG 7 cut(s) 171, 1179, 1824, 1896, 2184, 2672, 2857
MspR9I CCNGG 3 cut(s) 1897, 2672, 2673
MssI GTTTAAAC 1 cut(s) 1362
Mva1269I GAATGC 2 cut(s) 2508, 2672
MvnI CGCG 1 cut(s) 559
MwoI GCNNNNNNNGC 2 cut(s) 1464, 1917
NciI CCSGG 3 cut(s) 1897, 2672, 2673
NcoI CCATGG 1 cut(s) 1612
NlaIII CATG 8 cut(s) 227, 838, 1522, 1616, 1744, 1879, 2055, 2156
NlaIV GGNNCC 7 cut(s) 382, 811, 1025, 1096, 1752, 1753, 2188
NmuCI GTSAC 4 cut(s) 229, 496, 2021, 2484
NspI RCATGY 1 cut(s) 1744
NspV TTCGAA 3 cut(s) 504, 901, 1855
PaeR7I CTCGAG 2 cut(s) 512, 1001
PaqCI CACCTGC 1 cut(s) 404
PciI ACATGT 1 cut(s) 1740
PcsI WCGNNNNNNNCGW 2 cut(s) 147, 510
PctI GAATGC 2 cut(s) 2508, 2672
PdmI GAANNNNTTC 1 cut(s) 73
PfeI GAWTC 8 cut(s) 69, 198, 593, 1417, 1486, 1541, 2471, 2799
PflFI GACNNNGTC 1 cut(s) 968
PfoI TCCNGGA 1 cut(s) 1895
PkrI GCNGC 1 cut(s) 914
PleI GAGTC 5 cut(s) 151, 396, 928, 959, 2246
PmeI GTTTAAAC 1 cut(s) 1362
PpsI GAGTC 5 cut(s) 151, 396, 928, 959, 2246
PpuMI RGGWCCY 2 cut(s) 809, 1751
PscI ACATGT 1 cut(s) 1740
Psp1406I AACGTT 1 cut(s) 150
Psp5II RGGWCCY 2 cut(s) 809, 1751
PspN4I GGNNCC 7 cut(s) 382, 811, 1025, 1096, 1752, 1753, 2188
PspPI GGNCC 8 cut(s) 130, 334, 431, 809, 1466, 1688, 1751, 2060
PspPPI RGGWCCY 2 cut(s) 809, 1751
PspXI VCTCGAGB 1 cut(s) 1001
PstI CTGCAG 1 cut(s) 2701
PsuI RGATCY 7 cut(s) 238, 1109, 1148, 1250, 1297, 1564, 2692
PsyI GACNNNGTC 1 cut(s) 968
PvuII CAGCTG 1 cut(s) 2458
RsaI GTAC 5 cut(s) 545, 1085, 1996, 2593, 2818
RsaNI GTAC 5 cut(s) 544, 1084, 1995, 2592, 2817
RseI CAYNNNNRTG 1 cut(s) 2665
SatI GCNGC 1 cut(s) 913
Sau96I GGNCC 8 cut(s) 130, 334, 431, 809, 1466, 1688, 1751, 2060
ScaI AGTACT 1 cut(s) 2593
SchI GAGTC 5 cut(s) 152, 397, 929, 959, 2246
ScrFI CCNGG 3 cut(s) 1897, 2672, 2673
SduI GDGCHC 2 cut(s) 991, 1341
SfaNI GCATC 3 cut(s) 1275, 1516, 1836
SfcI CTRYAG 1 cut(s) 2697
Sfr274I CTCGAG 2 cut(s) 512, 1001
SfuI TTCGAA 3 cut(s) 504, 901, 1855
SinI GGWCC 4 cut(s) 334, 431, 809, 1751
SlaI CTCGAG 2 cut(s) 512, 1001
SmaI CCCGGG 1 cut(s) 2673
SmiMI CAYNNNNRTG 1 cut(s) 2665
SmlI CTYRAG 7 cut(s) 385, 512, 990, 1001, 1153, 2315, 2828
SmoI CTYRAG 7 cut(s) 385, 512, 990, 1001, 1153, 2315, 2828
SsiI CCGC 8 cut(s) 108, 429, 1421, 1645, 1697, 2358, 2646, 2654
SspI AATATT 4 cut(s) 724, 741, 1888, 2292
SspMI CTAG 5 cut(s) 236, 410, 462, 1442, 1799
StyD4I CCNGG 3 cut(s) 1895, 2670, 2671
StyI CCWWGG 2 cut(s) 355, 1612
TaaI ACNGT 2 cut(s) 714, 1994
TaiI ACGT 3 cut(s) 153, 1104, 2837
TatI WGTACW 3 cut(s) 1083, 1994, 2591
TfiI GAWTC 8 cut(s) 69, 198, 593, 1417, 1486, 1541, 2471, 2799
TscAI CASTG 2 cut(s) 1191, 2719
TseFI GTSAC 4 cut(s) 229, 496, 2021, 2484
TseI GCWGC 1 cut(s) 912
Tsp45I GTSAC 4 cut(s) 229, 496, 2021, 2484
TspDTI ATGAA 4 cut(s) 364, 1056, 1616, 2141
TspGWI ACGGA 3 cut(s) 502, 1263, 2702
TspMI CCCGGG 1 cut(s) 2671
TspRI CASTG 2 cut(s) 1191, 2719
Tth111I GACNNNGTC 1 cut(s) 968
Vha464I CTTAAG 2 cut(s) 2315, 2828
VneI GTGCAC 1 cut(s) 1337
VpaK11BI GGWCC 4 cut(s) 334, 431, 809, 1751
XapI RAATTY 6 cut(s) 363, 928, 1309, 1373, 1902, 2580
XbaI TCTAGA 1 cut(s) 1798
XceI RCATGY 1 cut(s) 1744
XcmI CCANNNNNNNNNTGG 1 cut(s) 55
XhoI CTCGAG 2 cut(s) 512, 1001
XmaI CCCGGG 1 cut(s) 2671
XmiI GTMKAC 2 cut(s) 470, 1571
XmnI GAANNNNTTC 1 cut(s) 73
XspI CTAG 5 cut(s) 236, 410, 462, 1442, 1799
ZraI GACGTC 1 cut(s) 2835
ZrmI AGTACT 1 cut(s) 2593
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.