Rw1G022440

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
Physical Location & Seq
Reverse (-)
47515970 .. 47520046
4077 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G022440.1

Sequence Viewer

Length: 2694 bp
ATGGAGTTGGGAAGGTGGCTCAAACATGCTTATGCAATATCAATTGTGCTTCTTCTGCAGATCAACGCTTCCTTATCCCTCGACCACCACCATGCTAATGTGATAGCAAGGTGCCTAGAAAGGGAGAGGGATGCACTGCTTGCTATCAAAGGAGACCTGGTGGATGAATACAACCAGCTCTCTTCGTGGGGAAGCGAAGCCAAAAACCGAGACTGTTGCGGATGGGAAAGGGTCCACTGCGATCACCAGACCGGCCATGTTATTGAACTTCATCTGATCTCTTTGCAAGGTAATCATATACAGAAAACTTTGCAAGGTGAAATTAGTCCTAAAATCATTGATAACTTGACCAATTTAAGTTATCTAGATCTGTCTTCGAATCTTCTAGGTGATGAAATTCCATATCATCAGCTTGGAAACCTTACTCATTTGCAATATCTCAATCTGGGCGATGAGTATATTGGCACCACTCATGGTGTAGAAAACCTCCATTGGCTCGCACATCTTTCTTCTTTAAAATACCTGGACCTGAGTGCGACCGATCTAAGTAAGGCTTCGGATTGGCTGGAAACAATAAACAAGCTCCCTAATTTAAGAAACTTGACCTTGATTGGTTTGATTCCCTATGCTTTCGCAAACATGAGCTCACTCACATATCTTAACCTCTCTTCCAACCAATTAAGTGGTTTGATTCCCGATGCTTTCGCAAACATGAGCTCACTTGCAACTCTTGACCTCTCTAATAACCCACTTGAAGGAGGGATCTCAACATCCATTGGCCGATTATGTAATTTGCAAACCTTGGCCATTACACACAGTAGGTTGCATGGACAGTTCTCTGAGTTTGTTCAAACATTTATTGGAAAGTTGTCTTCGTTGAAGACATTAGATCTCAAAGAAAATAGGCTAAGCGGAATGATACCGGAAAGTATTGGGAAATTGTCAGCCTTGCATACATTAGACCTCTCCGGTAATCGATTAAGCGGGAAAGTACCTGAAAGTATTGGACAATGCTCAGAACTGTCCAGTATGAATCTTAGTAAGAATTCTTTGGAAGAGGGAATTTCTGAAGTTCATTTTTCAAAATTGTCTGCACTAGAGGCTTTGGATTTATCCTATAACCCATTAGTTTTCAATGTCAATTCTGATTGGGTTCCTCCTTTTCAATTGTATTCTTTAAGTTTGAAATCATGCAAGGTCGGGCGGTATTTCCCAAACTGGCTTCGAACTCAGAAAGGTCTTTCCAAAATTGATATTTCTTATGCTGGAATTTCAGATGTCCTTCCAAGTTGGTTCCTGAGTCTCTTTGGTAACACTCAGACAATAGATCTCTCTCATAATCAACTTAGGGGAACATTTGAGAGTTCAACATTGAATGTTACATCATTGGCTGGAGTTGAAGTTCATTTCGGTTCCAATCAATTTGAAGGTTCAATACCGTCAATTTTATTTGCTGCTTCATATTTGGATCTCTCCGATAATAGGTTTTCAGATATGACAGCCTTGTGTGTTACTTCAGAGCTTCAAAGTTTAAAGTTTCTTGATCTCTCAGGCAATCATATTTCAGGAGAAATTCCATATTGTTGGAGACATTTGGTCTCTCTAGAACTACTCGATTTGAGTAGCAATGCTTTTTCCGGGAAAATCCCGACCACTATAGGCATTTTATCTCAAATGGAAACATTGAAGTTAAGAAGCAACAAACTTGTGGGAGAATTGCCTTCATCCTTGAAGAATTGTAAGAGCTTAAAAGTGATTGAGCTCGGAGACAATAAGCTTTCAGGATCAGTCCCTGAATGGTTGGGGGTTAGTTTTCCAAATTTGTTATGTCATTTAACGCACAATCAGATTTTGGATTTCTCTGTGAATGAAATCTCTGGAACTATACCTAAATGCCTCAATAATTTGACTTCTTTAACTCAAGGAGGAAATTCAAGTCTAACCATCAGACATTCTTTTCATCCATCTTATGCACAAGCACCTGGACCAACTATGTATATGGCGGAAGCGGAAGCACCTATGATGCCATCTGATTATTATGAGGACGATGCAACCTTCATGTGGAAAGGAAGAATGTCTGCTTACAAAAGTACTTTGGGACTTGTCAAGAGAATTGATCTCTCAAGCAACAAAATAACAGGGGAGATTCCAAATGAAATCACTCATCTTGTTGGGTTGGTTTCTTTGAACCTTTCAAGAAACCATCTGACAGGACATATTCCTTCACAGACTGGAAAGTTGCAGTCATTAGATTCTCTTGATTTGTCAAGAAACCAGCTAGATGGGGAAATTCCGACAAGCCTTGCTCAGATTGATCGACTTGCTTACTTGGACTTGTCATACAACGACTTGTCTGGTGAAATTCCAACTGGTACTCAACTCCAAGACCCTTCCTCTTTTGATGGAAATCTTAAATTGTGTGGATTTCCACTCCAAAAGATTTGTGATCCGGAAGGAAACAGTCGGCCAAATGTCTCGAGCAATGAAGAAGATCCAGATGAGCTCATCACGCTGGGTTTTTACATAAGTCTAGGAGTTGGATTTACTGTTGGATTTTGGGGAGTCTCCGGGGGTTTGATATTCAAGAGGTCATGGAGATATGCATACTACAACTTCTTGAATGCTTCAAATGATTGGCTTTATGTGAAGGTTGCTGTGATCAGACGGCAATTAAGTGATGTGCTTCATACATAA

Protein Analysis

897

Amino Acids

99.09

Weight (kDa)

5.61

Isoelectric Point (pI)

36.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 40 - 81 1.8e-08 Leucine rich repeat N-terminal domain
LRR_14 PF23598 162 - 274 1.4e-06 Leucine-rich repeat region
LRR_8 PF13855 203 - 251 5.2e-11 Leucine rich repeat
LRR_8 PF13855 264 - 327 4.7e-09 Leucine rich repeat
LRR_14 PF23598 285 - 370 2.2e-08 Leucine-rich repeat region
LRR_8 PF13855 334 - 376 5.6e-06 Leucine rich repeat
LRR_8 PF13855 488 - 544 9.9e-08 Leucine rich repeat
LRR_14 PF23598 489 - 624 1e-07 Leucine-rich repeat region
LRR_8 PF13855 744 - 784 8.7e-06 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000028)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g45420 FvH4_4g14031 FvH4_5g20780 FvH4_6g28530 FvH4_7g14020 FvH4_7g14030 FvH4_7g14040 FvH4_7g14050 FvH4_7g14060 FvH4_7g14070 FvH4_7g14090 FvH4_7g14110 FvH4_7g14140 FvH4_7g14450
malus_domestica MD00G1189100.v1.1 MD01G1018600.v1.1 MD01G1053800.v1.1 MD01G1053900.v1.1 MD01G1054000.v1.1 MD01G1054100.v1.1 MD01G1056700.v1.1 MD01G1057000.v1.1 MD01G1057300.v1.1 MD01G1057400.v1.1 MD01G1061600.v1.1 MD01G1061800.v1.1 MD01G1061900.v1.1 MD01G1062000.v1.1 MD01G1062400.v1.1 MD01G1062500.v1.1 MD01G1063200.v1.1 MD01G1063300.v1.1 MD01G1063400.v1.1 MD01G1063700.v1.1 MD01G1063900.v1.1 MD01G1064200.v1.1 MD01G1064300.v1.1 MD01G1064400.v1.1 MD01G1064600.v1.1 MD01G1064700.v1.1 MD01G1181100.v1.1 MD01G1212300.v1.1 MD01G1212500.v1.1 MD01G1212600.v1.1 MD02G1271900.v1.1 MD07G1136500.v1.1 MD07G1139300.v1.1 MD07G1141200.v1.1 MD07G1144700.v1.1 MD08G1144200.v1.1 MD14G1186300.v1.1 MD14G1186500.v1.1 MD14G1186700.v1.1 MD14G1186800.v1.1 MD15G1351300.v1.1 MD15G1439500.v1.1
prunus_persica Prupe.1G067000_v2.0.a1 Prupe.2G077400_v2.0.a1 Prupe.2G077700_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078600_v2.0.a1 Prupe.2G078800_v2.0.a1 Prupe.2G099600_v2.0.a1 Prupe.2G099700_v2.0.a1 Prupe.2G155100_v2.0.a1 Prupe.2G155500_v2.0.a1 Prupe.2G155600_v2.0.a1 Prupe.2G155800_v2.0.a1 Prupe.2G155900_v2.0.a1 Prupe.2G156100_v2.0.a1 Prupe.2G166100_v2.0.a1 Prupe.2G166300_v2.0.a1 Prupe.2G167500_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G168400_v2.0.a1 Prupe.2G168700_v2.0.a1 Prupe.2G168800_v2.0.a1 Prupe.2G169000_v2.0.a1 Prupe.2G169100_v2.0.a1 Prupe.2G169200_v2.0.a1 Prupe.2G169500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G172300_v2.0.a1 Prupe.2G304800_v2.0.a1 Prupe.4G264800_v2.0.a1 Prupe.4G265000_v2.0.a1 Prupe.5G051900_v2.0.a1 Prupe.5G052000_v2.0.a1
pyrus_communis pycom01g08380 pycom01g08430 pycom01g08490 pycom01g08520 pycom01g08540 pycom01g08550 pycom01g08600 pycom01g08630 pycom01g08660 pycom01g08720 pycom01g09180 pycom01g09200 pycom01g09210 pycom01g09270 pycom01g09280 pycom01g09300 pycom01g09380 pycom01g19110 pycom01g22260 pycom01g22310 pycom01g22330 pycom01g22350 pycom01g22360 pycom02g23250 pycom07g13420 pycom07g13670 pycom07g13900 pycom07g13910 pycom07g13960 pycom07g13970 pycom07g25680 pycom11g22830
rosa_chinensis RchiOBHm_Chr0c22g0500431 RchiOBHm_Chr0c22g0500441 RchiOBHm_Chr0c22g0500561 RchiOBHm_Chr0c22g0500571 RchiOBHm_Chr0c22g0500611 RchiOBHm_Chr0c22g0500621 RchiOBHm_Chr0c22g0500631 RchiOBHm_Chr0c22g0500681 RchiOBHm_Chr1g0348221 RchiOBHm_Chr1g0348251 RchiOBHm_Chr1g0352861 RchiOBHm_Chr1g0352871 RchiOBHm_Chr1g0352891 RchiOBHm_Chr1g0352901 RchiOBHm_Chr1g0354671 RchiOBHm_Chr1g0354701 RchiOBHm_Chr1g0354711 RchiOBHm_Chr1g0354751 RchiOBHm_Chr1g0354761 RchiOBHm_Chr1g0354841 RchiOBHm_Chr1g0354851 RchiOBHm_Chr1g0354881 RchiOBHm_Chr1g0354971 RchiOBHm_Chr1g0354981 RchiOBHm_Chr1g0354991 RchiOBHm_Chr1g0355001 RchiOBHm_Chr1g0355011 RchiOBHm_Chr1g0355021 RchiOBHm_Chr1g0355861 RchiOBHm_Chr1g0379671 RchiOBHm_Chr1g0379681 RchiOBHm_Chr2g0096591 RchiOBHm_Chr2g0132821 RchiOBHm_Chr3g0454901 RchiOBHm_Chr3g0472711 RchiOBHm_Chr4g0400791 RchiOBHm_Chr5g0069481 RchiOBHm_Chr5g0069511 RchiOBHm_Chr5g0069551 RchiOBHm_Chr6g0254651 RchiOBHm_Chr6g0259721 RchiOBHm_Chr7g0205911 RchiOBHm_Chr7g0206401 RchiOBHm_Chr7g0206571 RchiOBHm_Chr7g0206581 RchiOBHm_Chr7g0206621 RchiOBHm_Chr7g0206631 RchiOBHm_Chr7g0206641 RchiOBHm_Chr7g0206681 RchiOBHm_Chr7g0206691 RchiOBHm_Chr7g0206751 RchiOBHm_Chr7g0206761 RchiOBHm_Chr7g0206851 RchiOBHm_Chr7g0206911 RchiOBHm_Chr7g0206921 RchiOBHm_Chr7g0207001 RchiOBHm_Chr7g0207011 RchiOBHm_Chr7g0207031 RchiOBHm_Chr7g0207101 RchiOBHm_Chr7g0207161 RchiOBHm_Chr7g0207201 RchiOBHm_Chr7g0207271 RchiOBHm_Chr7g0207301 RchiOBHm_Chr7g0207311 RchiOBHm_Chr7g0207421 RchiOBHm_Chr7g0207481 RchiOBHm_Chr7g0207491 RchiOBHm_Chr7g0207501 RchiOBHm_Chr7g0207521 RchiOBHm_Chr7g0207531 RchiOBHm_Chr7g0207561 RchiOBHm_Chr7g0207571 RchiOBHm_Chr7g0207581 RchiOBHm_Chr7g0207601 RchiOBHm_Chr7g0207621 RchiOBHm_Chr7g0207631 RchiOBHm_Chr7g0207651 RchiOBHm_Chr7g0207661 RchiOBHm_Chr7g0207711 RchiOBHm_Chr7g0207761 RchiOBHm_Chr7g0207801 RchiOBHm_Chr7g0208821 RchiOBHm_Chr7g0208831 RchiOBHm_Chr7g0208841 RchiOBHm_Chr7g0213601 RchiOBHm_Chr7g0215981 RchiOBHm_Chr7g0216021
rosa_laevigata RLG00000003193 RLG00000003194 RLG00000003287 RLG00000003288 RLG00000003289 RLG00000003293 RLG00000003294 RLG00000003295 RLG00000003297 RLG00000003299 RLG00000003301 RLG00000003327 RLG00000003347 RLG00000016653 RLG00000018642 RLG00000018643 RLG00000019285 RLG00000022542 RLG00000026368 RLG00000026371 RLG00000028124 RLG00000028125 RLG00000028183 RLG00000028184 RLG00000028185 RLG00000028188 RLG00000028673 RLG00000029267 RLG00000029325 RLG00000029674 RLG00000032883 RLG00000036055 RLG00000036058 RLG00000036065 RLG00000036068 RLG00000036071 RLG00000036072 RLG00000036075 RLG00000036076
rosa_multiflora Rmu_co8250183.1_g000001 Rmu_co8271981.1_g000001 Rmu_co8410829.1_g000001 Rmu_co8432879.1_g000001 Rmu_co8441941.1_g000001 Rmu_sc0000076.1_g000031 Rmu_sc0000738.1_g000038 Rmu_sc0000848.1_g000003 Rmu_sc0000848.1_g000014 Rmu_sc0000848.1_g000015 Rmu_sc0000848.1_g000016 Rmu_sc0001264.1_g000001 Rmu_sc0002284.1_g000018 Rmu_sc0002356.1_g000011 Rmu_sc0003020.1_g000003 Rmu_sc0003115.1_g000001 Rmu_sc0003115.1_g000002 Rmu_sc0003115.1_g000003 Rmu_sc0003115.1_g000004 Rmu_sc0003115.1_g000005 Rmu_sc0003115.1_g000008 Rmu_sc0003115.1_g000010 Rmu_sc0003115.1_g000011 Rmu_sc0003115.1_g000014 Rmu_sc0003565.1_g000002 Rmu_sc0003652.1_g000013 Rmu_sc0003652.1_g000015 Rmu_sc0003652.1_g000016 Rmu_sc0003652.1_g000019 Rmu_sc0003940.1_g000001 Rmu_sc0003940.1_g000004 Rmu_sc0003940.1_g000009 Rmu_sc0004084.1_g000010 Rmu_sc0004705.1_g000021 Rmu_sc0004972.1_g000007 Rmu_sc0004987.1_g000002 Rmu_sc0004987.1_g000006 Rmu_sc0005065.1_g000018 Rmu_sc0005065.1_g000029 Rmu_sc0005391.1_g000002 Rmu_sc0005633.1_g000003 Rmu_sc0005633.1_g000008 Rmu_sc0006632.1_g000014 Rmu_sc0006632.1_g000018 Rmu_sc0006681.1_g000010 Rmu_sc0006681.1_g000011 Rmu_sc0006733.1_g000003 Rmu_sc0007385.1_g000005 Rmu_sc0007385.1_g000007 Rmu_sc0007385.1_g000009 Rmu_sc0007385.1_g000016 Rmu_sc0007645.1_g000002 Rmu_sc0007645.1_g000003 Rmu_sc0007645.1_g000022 Rmu_sc0007828.1_g000008 Rmu_sc0008509.1_g000003 Rmu_sc0008509.1_g000015 Rmu_sc0008509.1_g000016 Rmu_sc0008509.1_g000020 Rmu_sc0008509.1_g000030 Rmu_sc0008509.1_g000041 Rmu_sc0008756.1_g000001 Rmu_sc0008756.1_g000003 Rmu_sc0013028.1_g000002 Rmu_sc0013028.1_g000003 Rmu_sc0013028.1_g000005 Rmu_sc0013160.1_g000001 Rmu_sc0014454.1_g000009 Rmu_sc0014455.1_g000007 Rmu_sc0014659.1_g000004 Rmu_sc0017798.1_g000002 Rmu_sc0017798.1_g000004 Rmu_sc0029608.1_g000001 Rmu_sc0037861.1_g000001 Rmu_sc0038750.1_g000001 Rmu_sc0042995.1_g000001 Rmu_ssc0000161.1_g000017
rosa_roxburghii Rroxscaffold_1G00009180 Rroxscaffold_1G00009190 Rroxscaffold_1G00011450 Rroxscaffold_1G00011480 Rroxscaffold_2G00111660 Rroxscaffold_2G00113570 Rroxscaffold_2G00122140 Rroxscaffold_3G00243730 Rroxscaffold_3G00245750 Rroxscaffold_3G00245760 Rroxscaffold_3G00250220 Rroxscaffold_3G00251160 Rroxscaffold_3G00251270 Rroxscaffold_3G00251280 Rroxscaffold_3G00251300 Rroxscaffold_3G00251340 Rroxscaffold_3G00251350 Rroxscaffold_3G00251390 Rroxscaffold_3G00251400 Rroxscaffold_3G00251560 Rroxscaffold_3G00251570 Rroxscaffold_3G00251870 Rroxscaffold_3G00252200 Rroxscaffold_3G00252210 Rroxscaffold_4G00279970 Rroxscaffold_4G00299970 Rroxscaffold_4G00300760 Rroxscaffold_4G00300780 Rroxscaffold_4G00300810 Rroxscaffold_4G00300850 Rroxscaffold_4G00307080 Rroxscaffold_4G00307100 Rroxscaffold_4G00313990 Rroxscaffold_6G00405080
rosa_rugosa Rorug01G0193600 Rorug01G0193700 Rorug01G0243800 Rorug01G0244000 Rorug01G0244000 Rorug01G0244400 Rorug01G0414300.1 Rorug01G0414500 Rorug01G0414600 Rorug02G0235600 Rorug02G0307900 Rorug02G0583100 Rorug02G0583200 Rorug02G0583300 Rorug05G0398000 Rorug05G0398100 Rorug05G0398200 Rorug05G0580300 Rorug05G0590300 Rorug06G0116000 Rorug06G0116100 Rorug07G0096800 Rorug07G0097100.1 Rorug07G0097200 Rorug07G0098600 Rorug07G0098600 Rorug07G0098700 Rorug07G0099100 Rorug07G0106100 Rorug07G0106200 Rorug07G0106200 Rorug07G0106300 Rorug07G0157600 Rorug07G0157700 Rorug07G0157700 Rorug07G0157800
rosa_samantha Rh1AG255500 Rh1AG256700 Rh1BG225800 Rh1BG226200 Rh1BG230000 Rh1CG195300 Rh1CG238400 Rh1CG238500 Rh1CG238900 Rh1CG239000 Rh1CG239300 Rh1CG239400 Rh1CG239800 Rh1CG240000 Rh1CG240200 Rh1CG240300 Rh1CG244300 Rh1CG406900 Rh1CG407300 Rh1CG407400 Rh2CG343600 Rh2DG383200 Rh3BG205900 Rh4AG404400 Rh4BG415500 Rh5AG455200 Rh5AG455600 Rh5CG497000 Rh5CG497200 Rh7AG228800 Rh7AG230400 Rh7AG230800 Rh7AG231200 Rh7AG231600 Rh7AG231800 Rh7AG232100 Rh7AG241600 Rh7BG236200 Rh7CG238200 Rh7CG239100 Rh7CG243400 Rh7CG244900
rosa_wichuraiana Rw0G023040 Rw1G017780 Rw1G022320 Rw1G022340 Rw1G022410 Rw1G022420 Rw1G022440 Rw1G022460 Rw1G022490 Rw1G022500 Rw1G022530 Rw1G022550 Rw1G022560 Rw1G022600 Rw1G023060 Rw1G038150 Rw1G038160 Rw2G008210 Rw2G022350 Rw2G029290 Rw4G015050 Rw4G019850 Rw5G024060 Rw5G042460 Rw7G019160 Rw7G019460 Rw7G019690 Rw7G019830 Rw7G019860 Rw7G019880 Rw7G019890 Rw7G019930 Rw7G019990 Rw7G020460 Rw7G025100 Rw7G025120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 111, 464
AccIII TCCGGA 1 cut(s) 2449
AciI CCGC 6 cut(s) 219, 912, 984, 1204, 2003, 2009
AclWI GGATC 5 cut(s) 770, 1476, 1792, 2441, 2486
AcoI YGGCCR 4 cut(s) 253, 778, 804, 2465
AcsI RAATTY 9 cut(s) 396, 1045, 1062, 1269, 1572, 1819, 1930, 2289, 2361
AcuI CTGAAG 2 cut(s) 1089, 1500
AfaI GTAC 3 cut(s) 993, 2092, 2374
AfiI CCNNNNNNNGG 4 cut(s) 121, 755, 1482, 2061
AhdI GACNNNNNGTC 1 cut(s) 1595
AjnI CCWGG 3 cut(s) 156, 522, 1981
AloI GAACNNNNNNTCC 2 cut(s) 1386, 1418
Alw21I GWGCWC 4 cut(s) 647, 719, 1764, 2505
Alw26I GTCTC 8 cut(s) 147, 204, 1307, 1582, 1603, 1761, 2479, 2569
AlwI GGATC 5 cut(s) 770, 1476, 1792, 2441, 2486
AlwNI CAGNNNCTG 1 cut(s) 1793
Ama87I CYCGRG 1 cut(s) 2476
Aor13HI TCCGGA 1 cut(s) 2449
AoxI GGCC 4 cut(s) 253, 778, 804, 2465
ApeKI GCWGC 1 cut(s) 1454
ApoI RAATTY 9 cut(s) 396, 1045, 1062, 1269, 1572, 1819, 1930, 2289, 2361
AspS9I GGNCC 3 cut(s) 232, 526, 1985
AsuC2I CCSGG 2 cut(s) 1639, 2569
AsuHPI GGTGA 4 cut(s) 236, 329, 401, 2369
AsuII TTCGAA 2 cut(s) 377, 1225
AvaI CYCGRG 1 cut(s) 2476
AvaII GGWCC 3 cut(s) 232, 526, 1985
BalI TGGCCA 1 cut(s) 806
BanI GGYRCC 2 cut(s) 111, 464
BanII GRGCYC 4 cut(s) 647, 719, 1764, 2505
BarI GAAGNNNNNNTAC 2 cut(s) 1419, 1451
BbsI GAAGAC 3 cut(s) 366, 864, 887
Bbv12I GWGCWC 4 cut(s) 647, 719, 1764, 2505
BbvI GCAGC 1 cut(s) 1441
BccI CCATC 7 cut(s) 216, 1952, 1972, 2035, 2211, 2276, 2396
BceAI ACGGC 1 cut(s) 2681
BcgI CGANNNNNNTGC 2 cut(s) 198, 232
BciT130I CCWGG 3 cut(s) 158, 524, 1983
BclI TGATCA 1 cut(s) 2658
BcnI CCSGG 2 cut(s) 1639, 2569
BcoDI GTCTC 8 cut(s) 147, 204, 1307, 1582, 1603, 1761, 2479, 2569
BfaI CTAG 7 cut(s) 116, 365, 386, 1097, 1604, 2279, 2531
BfmI CTRYAG 2 cut(s) 56, 1656
BglII AGATCT 3 cut(s) 367, 889, 1327
BisI GCNGC 1 cut(s) 1455
BlpI GCTNAGC 1 cut(s) 908
BlsI GCNGC 1 cut(s) 1456
BmcAI AGTACT 1 cut(s) 2092
Bme1390I CCNGG 5 cut(s) 158, 524, 1639, 1983, 2569
Bme18I GGWCC 3 cut(s) 232, 526, 1985
BmeRI GACNNNNNGTC 1 cut(s) 1595
BmeT110I CYCGRG 1 cut(s) 2476
BmgT120I GGNCC 3 cut(s) 232, 526, 1985
BmiI GGNNCC 6 cut(s) 113, 233, 466, 1155, 1295, 1414
BmrFI CCNGG 5 cut(s) 158, 524, 1639, 1983, 2569
BmsI GCATC 4 cut(s) 121, 688, 2013, 2038
BpiI GAAGAC 3 cut(s) 366, 864, 887
BpmI CTGGAG 1 cut(s) 1413
Bpu1102I GCTNAGC 1 cut(s) 908
Bpu14I TTCGAA 2 cut(s) 377, 1225
BpuEI CTTGAG 2 cut(s) 1905, 2107
BpuMI CCSGG 2 cut(s) 1639, 2569
Bsa29I ATCGAT 1 cut(s) 976
BsaBI GATNNNNATC 1 cut(s) 2406
BsaI GGTCTC 2 cut(s) 147, 1603
BsaJI CCNNGG 2 cut(s) 801, 2568
BsaWI WCCGGW 3 cut(s) 922, 968, 2449
BsaXI ACNNNNNCTCC 4 cut(s) 144, 174, 1386, 1416
Bsc4I CCNNNNNNNGG 4 cut(s) 121, 755, 1482, 2061
Bse118I RCCGGY 1 cut(s) 251
Bse1I ACTGG 4 cut(s) 1026, 1223, 2236, 2374
Bse3DI GCAATG 2 cut(s) 1633, 2488
Bse8I GATNNNNATC 1 cut(s) 2406
BseAI TCCGGA 1 cut(s) 2449
BseBI CCWGG 3 cut(s) 158, 524, 1983
BseCI ATCGAT 1 cut(s) 976
BseDI CCNNGG 2 cut(s) 801, 2568
BseGI GGATG 6 cut(s) 136, 169, 227, 770, 1724, 1960
BseJI GATNNNNATC 1 cut(s) 2406
BseLI CCNNNNNNNGG 4 cut(s) 121, 755, 1482, 2061
BseMI GCAATG 2 cut(s) 1633, 2488
BseMII CTCAG 8 cut(s) 521, 831, 1029, 1244, 1289, 1331, 1563, 2321
BseNI ACTGG 4 cut(s) 1026, 1223, 2236, 2374
BseXI GCAGC 1 cut(s) 1441
BseYI CCCAGC 1 cut(s) 2512
BsgI GTGCAG 1 cut(s) 1077
Bsh1285I CGRYCG 1 cut(s) 540
BshFI GGCC 4 cut(s) 255, 780, 806, 2467
BshNI GGYRCC 2 cut(s) 111, 464
BshVI ATCGAT 1 cut(s) 976
BsiEI CGRYCG 1 cut(s) 540
BsiHKAI GWGCWC 4 cut(s) 647, 719, 1764, 2505
BsiHKCI CYCGRG 1 cut(s) 2476
BsiSI CCGG 6 cut(s) 252, 923, 969, 1638, 2450, 2568
BslFI GGGAC 2 cut(s) 1775, 2112
BslI CCNNNNNNNGG 4 cut(s) 121, 755, 1482, 2061
BsmAI GTCTC 8 cut(s) 147, 204, 1307, 1582, 1603, 1761, 2479, 2569
BsmFI GGGAC 2 cut(s) 1775, 2112
BsmI GAATGC 1 cut(s) 2626
BsnI GGCC 4 cut(s) 255, 780, 806, 2467
Bso31I GGTCTC 2 cut(s) 147, 1603
BsoBI CYCGRG 1 cut(s) 2476
Bsp119I TTCGAA 2 cut(s) 377, 1225
Bsp1286I GDGCHC 4 cut(s) 647, 719, 1764, 2505
Bsp13I TCCGGA 1 cut(s) 2449
Bsp1720I GCTNAGC 1 cut(s) 908
BspACI CCGC 6 cut(s) 219, 912, 984, 1204, 2003, 2009
BspANI GGCC 4 cut(s) 255, 780, 806, 2467
BspCNI CTCAG 8 cut(s) 522, 832, 1028, 1243, 1290, 1330, 1562, 2320
BspDI ATCGAT 1 cut(s) 976
BspEI TCCGGA 1 cut(s) 2449
BspLI GGNNCC 6 cut(s) 113, 233, 466, 1155, 1295, 1414
BspMAI CTGCAG 1 cut(s) 60
BspPI GGATC 5 cut(s) 770, 1476, 1792, 2441, 2486
BspT104I TTCGAA 2 cut(s) 377, 1225
BspT107I GGYRCC 2 cut(s) 111, 464
BspTNI GGTCTC 2 cut(s) 147, 1603
BsrDI GCAATG 2 cut(s) 1633, 2488
BsrFI RCCGGY 1 cut(s) 251
BsrI ACTGG 4 cut(s) 1026, 1223, 2236, 2374
BssAI RCCGGY 1 cut(s) 251
BssECI CCNNGG 2 cut(s) 801, 2568
BssT1I CCWWGG 1 cut(s) 801
Bst2UI CCWGG 3 cut(s) 158, 524, 1983
Bst4CI ACNGT 7 cut(s) 215, 818, 834, 1023, 1440, 2462, 2548
Bst6I CTCTTC 3 cut(s) 187, 673, 1050
BstAPI GCANNNNNTGC 1 cut(s) 140
BstBI TTCGAA 2 cut(s) 377, 1225
BstC8I GCNNGC 2 cut(s) 141, 498
BstF5I GGATG 6 cut(s) 136, 169, 227, 770, 1724, 1960
BstMAI GTCTC 8 cut(s) 147, 204, 1307, 1582, 1603, 1761, 2479, 2569
BstMCI CGRYCG 1 cut(s) 540
BstMWI GCNNNNNNNGC 4 cut(s) 55, 140, 1100, 2509
BstNI CCWGG 3 cut(s) 158, 524, 1983
BstNSI RCATGY 1 cut(s) 29
BstSCI CCNGG 5 cut(s) 156, 522, 1637, 1981, 2567
BstSFI CTRYAG 2 cut(s) 56, 1656
BstV1I GCAGC 1 cut(s) 1441
BstV2I GAAGAC 3 cut(s) 366, 864, 887
BstX2I RGATCY 6 cut(s) 367, 762, 889, 1327, 1468, 2491
BstXI CCANNNNNNTGG 3 cut(s) 683, 1584, 2282
BstYI RGATCY 6 cut(s) 367, 762, 889, 1327, 1468, 2491
Bsu15I ATCGAT 1 cut(s) 976
BsuRI GGCC 4 cut(s) 255, 780, 806, 2467
BsuTUI ATCGAT 1 cut(s) 976
BtgZI GCGATG 1 cut(s) 465
BtsCI GGATG 6 cut(s) 136, 169, 227, 770, 1724, 1960
BtsI GCAGTG 2 cut(s) 134, 235
BtsIMutI CAGTG 2 cut(s) 134, 235
Cac8I GCNNGC 2 cut(s) 141, 498
CaiI CAGNNNCTG 1 cut(s) 1793
Cfr10I RCCGGY 1 cut(s) 251
Cfr13I GGNCC 3 cut(s) 232, 526, 1985
ClaI ATCGAT 1 cut(s) 976
CsiI ACCWGGT 1 cut(s) 156
Csp6I GTAC 3 cut(s) 992, 2091, 2373
CviQI GTAC 3 cut(s) 992, 2091, 2373
DraI TTTAAA 2 cut(s) 516, 1533
DriI GACNNNNNGTC 1 cut(s) 1595
EaeI YGGCCR 4 cut(s) 253, 778, 804, 2465
Eam1104I CTCTTC 3 cut(s) 187, 673, 1050
Eam1105I GACNNNNNGTC 1 cut(s) 1595
EarI CTCTTC 3 cut(s) 187, 673, 1050
EciI GGCGGA 1 cut(s) 2018
Ecl136II GAGCTC 4 cut(s) 645, 717, 1762, 2503
Eco130I CCWWGG 1 cut(s) 801
Eco24I GRGCYC 4 cut(s) 647, 719, 1764, 2505
Eco31I GGTCTC 2 cut(s) 147, 1603
Eco47I GGWCC 3 cut(s) 232, 526, 1985
Eco53kI GAGCTC 4 cut(s) 645, 717, 1762, 2503
Eco57I CTGAAG 2 cut(s) 1089, 1500
Eco88I CYCGRG 1 cut(s) 2476
EcoICRI GAGCTC 4 cut(s) 645, 717, 1762, 2503
EcoRI GAATTC 1 cut(s) 1045
EcoRII CCWGG 3 cut(s) 156, 522, 1981
EcoT14I CCWWGG 1 cut(s) 801
EcoT22I ATGCAT 1 cut(s) 2605
EcoT38I GRGCYC 4 cut(s) 647, 719, 1764, 2505
ErhI CCWWGG 1 cut(s) 801
FalI AAGNNNNNCTT 2 cut(s) 538, 570
FaqI GGGAC 2 cut(s) 1775, 2112
FauI CCCGC 1 cut(s) 977
FbaI TGATCA 1 cut(s) 2658
Fnu4HI GCNGC 1 cut(s) 1455
FokI GGATG 6 cut(s) 143, 176, 234, 757, 1711, 1947
FriOI GRGCYC 4 cut(s) 647, 719, 1764, 2505
Fsp4HI GCNGC 1 cut(s) 1455
FspBI CTAG 7 cut(s) 116, 365, 386, 1097, 1604, 2279, 2531
GluI GCNGC 1 cut(s) 1455
GsaI CCCAGC 1 cut(s) 2516
GsuI CTGGAG 1 cut(s) 1413
HaeIII GGCC 4 cut(s) 255, 780, 806, 2467
HapII CCGG 6 cut(s) 252, 923, 969, 1638, 2450, 2568
HindIII AAGCTT 1 cut(s) 1775
HinfI GANTC 8 cut(s) 379, 619, 691, 1033, 1300, 2146, 2252, 2562
HpaII CCGG 6 cut(s) 252, 923, 969, 1638, 2450, 2568
HphI GGTGA 4 cut(s) 236, 329, 401, 2369
Hpy166II GTNNAC 1 cut(s) 235
Hpy8I GTNNAC 1 cut(s) 235
HpyCH4III ACNGT 7 cut(s) 215, 818, 834, 1023, 1440, 2462, 2548
HpyF10VI GCNNNNNNNGC 4 cut(s) 55, 140, 1100, 2509
Kpn2I TCCGGA 1 cut(s) 2449
Ksp22I TGATCA 1 cut(s) 2658
LmnI GCTCC 1 cut(s) 588
Lsp1109I GCAGC 1 cut(s) 1441
LweI GCATC 4 cut(s) 121, 688, 2013, 2038
MabI ACCWGGT 1 cut(s) 156
MaeI CTAG 7 cut(s) 116, 365, 386, 1097, 1604, 2279, 2531
MaeIII GTNAC 3 cut(s) 1310, 1378, 1510
MfeI CAATTG 2 cut(s) 42, 1166
MflI RGATCY 6 cut(s) 367, 762, 889, 1327, 1468, 2491
MhlI GDGCHC 4 cut(s) 647, 719, 1764, 2505
MlsI TGGCCA 1 cut(s) 806
MluNI TGGCCA 1 cut(s) 806
MlyI GAGTC 2 cut(s) 1309, 2571
MmeI TCCRAC 6 cut(s) 696, 1565, 2318, 2390, 2518, 2530
Mox20I TGGCCA 1 cut(s) 806
Mph1103I ATGCAT 1 cut(s) 2605
MroI TCCGGA 1 cut(s) 2449
MscI TGGCCA 1 cut(s) 806
MslI CAYNNNNRTG 3 cut(s) 30, 90, 96
Msp20I TGGCCA 1 cut(s) 806
MspI CCGG 6 cut(s) 252, 923, 969, 1638, 2450, 2568
MspR9I CCNGG 5 cut(s) 158, 524, 1639, 1983, 2569
MunI CAATTG 2 cut(s) 42, 1166
Mva1269I GAATGC 1 cut(s) 2626
MvaI CCWGG 3 cut(s) 158, 524, 1983
MwoI GCNNNNNNNGC 4 cut(s) 55, 140, 1100, 2509
NciI CCSGG 2 cut(s) 1639, 2569
NlaIV GGNNCC 6 cut(s) 113, 233, 466, 1155, 1295, 1414
NsiI ATGCAT 1 cut(s) 2605
NspI RCATGY 1 cut(s) 29
NspV TTCGAA 2 cut(s) 377, 1225
PaeR7I CTCGAG 1 cut(s) 2476
PctI GAATGC 1 cut(s) 2626
PfeI GAWTC 6 cut(s) 379, 619, 691, 1033, 2146, 2252
PfoI TCCNGGA 1 cut(s) 1637
PkrI GCNGC 1 cut(s) 1456
PleI GAGTC 2 cut(s) 1308, 2570
PpsI GAGTC 2 cut(s) 1308, 2570
Psp124BI GAGCTC 4 cut(s) 647, 719, 1764, 2505
Psp6I CCWGG 3 cut(s) 156, 522, 1981
PspFI CCCAGC 1 cut(s) 2512
PspGI CCWGG 3 cut(s) 156, 522, 1981
PspN4I GGNNCC 6 cut(s) 113, 233, 466, 1155, 1295, 1414
PspPI GGNCC 3 cut(s) 232, 526, 1985
PstI CTGCAG 1 cut(s) 60
PstNI CAGNNNCTG 1 cut(s) 1793
PsuI RGATCY 6 cut(s) 367, 762, 889, 1327, 1468, 2491
RsaI GTAC 3 cut(s) 993, 2092, 2374
RsaNI GTAC 3 cut(s) 992, 2091, 2373
RseI CAYNNNNRTG 3 cut(s) 30, 90, 96
SacI GAGCTC 4 cut(s) 647, 719, 1764, 2505
SatI GCNGC 1 cut(s) 1455
Sau96I GGNCC 3 cut(s) 232, 526, 1985
ScaI AGTACT 1 cut(s) 2092
SchI GAGTC 2 cut(s) 1309, 2571
ScrFI CCNGG 5 cut(s) 158, 524, 1639, 1983, 2569
SduI GDGCHC 4 cut(s) 647, 719, 1764, 2505
SexAI ACCWGGT 1 cut(s) 156
SfaNI GCATC 4 cut(s) 121, 688, 2013, 2038
SfcI CTRYAG 2 cut(s) 56, 1656
Sfr274I CTCGAG 1 cut(s) 2476
SfuI TTCGAA 2 cut(s) 377, 1225
SinI GGWCC 3 cut(s) 232, 526, 1985
SlaI CTCGAG 1 cut(s) 2476
SmiMI CAYNNNNRTG 3 cut(s) 30, 90, 96
SmlI CTYRAG 3 cut(s) 1920, 2122, 2476
SmoI CTYRAG 3 cut(s) 1920, 2122, 2476
SsiI CCGC 6 cut(s) 219, 912, 984, 1204, 2003, 2009
SspMI CTAG 7 cut(s) 116, 365, 386, 1097, 1604, 2279, 2531
SstI GAGCTC 4 cut(s) 647, 719, 1764, 2505
StyD4I CCNGG 5 cut(s) 156, 522, 1637, 1981, 2567
StyI CCWWGG 1 cut(s) 801
TaaI ACNGT 7 cut(s) 215, 818, 834, 1023, 1440, 2462, 2548
TaqI TCGA 7 cut(s) 81, 377, 976, 1225, 1614, 2317, 2477
TaqII GACCGA 1 cut(s) 554
TatI WGTACW 1 cut(s) 2090
TfiI GAWTC 6 cut(s) 379, 619, 691, 1033, 2146, 2252
TscAI CASTG 2 cut(s) 141, 242
TseI GCWGC 1 cut(s) 1454
TspRI CASTG 2 cut(s) 141, 242
VpaK11BI GGWCC 3 cut(s) 232, 526, 1985
XapI RAATTY 9 cut(s) 396, 1045, 1062, 1269, 1572, 1819, 1930, 2289, 2361
XbaI TCTAGA 2 cut(s) 364, 1603
XceI RCATGY 1 cut(s) 29
XhoI CTCGAG 1 cut(s) 2476
XspI CTAG 7 cut(s) 116, 365, 386, 1097, 1604, 2279, 2531
ZrmI AGTACT 1 cut(s) 2092
Zsp2I ATGCAT 1 cut(s) 2605
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.