Rmu_sc0013160.1_g000001

Leucine Rich repeat

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0013160.1
Physical Location & Seq
Forward (+)
1233 .. 4346
3114 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0013160.1_g000001.1.cds

Sequence Viewer

Length: 3114 bp
atgagtggtgggtctatgcattctggtttggttgggcttgtgtgcctggccattgcctctgctatttgttgctcaagtgttggaagctccaacaacatcatgtgcttggagagtgaaaggcatgctcttctccaattcaaacaaggccttgtggatgactccaacgctcttgcctcttggaaaagtgagaaagattgctgcaagtggagaggaatagcatgcaacaaccaaacaggtcatgtcatcattctagatctctctgatagttatttcgattccactaaatggagaggtgaaattagtccttcactacttgaattgccatatctaaattacttggacctcagttttaatgattttggaggaatgaccattcccaagttcattggttctttgagtcaattgaaagagctcaaacttgcacatgctaatttcagtggacctgttcctccccaacttggaaacctctctaatttgcacactcttgatctttcctacaatgattttgaaggaatgatgattcccaaattcattggctctctgagtcaattgaaagaactcaatcttgcatctgctaaattcagtggacctgttcctccccaacttggaaacctctctaatttgcacactcttgatctttcctacaatgattttgaaggaatgatgattcccaaattcattggctctctgagtcaattgaaagaactcaatcttgcatatgctaaattcagtggacctgttcctccccaacttggaaacctctctaatttgcacactcttgatctttccaaaaactatgaatctcccaactatgatctttaccgtaaccaagtttttcgttcaaaaaatctagagtggttatctcatctttcttccttgagatacttggagatgtcaggtgtagatttgtcaaaggttgtgaattggccacaatctttaagcaggctcactttactgacagagcttcagttatcccagtgtaaccttcctgatgtcaatctaagatcactttcctttattaattcttccacatctcttcaactccttgacctctcttggaactctcttaattcttcaatattttattggatagccaatgtcagcagcaactttgtccatattgatctctcttccaacaatctcaaaggtgccatcccagatgtcttcacaagcatgctttctctagtaacaatagatctgtctgagaataaacttgaaggtgggataccaaaaggctttcaaaacttatgcagcttagagtcgttgaccttatcctcaaaccaattgtctgaaaacattgaggactctgttaaaaccttgtcttgtgctgagaacacacttgacaccttggacttgagggataacctgttttgggggtcattgccggatttggcacgtttttcaaagttaagagtgttagatcttatgagtaatcaactaaatgggtctatacccgagagtgtcgggcaactctctagccttgaaacattatctctctgggggaattctttgagtggtgtcataacagaagcccactttttgaacctctctcgtttacagactttggatctttctggtaatcgtttctctatcaacctgagctctgattggaatccaccttttcaacttactggtcggttagatatgtcctcttgcaaggtgggcccagcttttcccaagtggattctaacgcagacaaatcttactgctcttaatctcactaatgctggactatcaggatcattacctaataagttttgggatctgttttctggcttggattacttagatctctctatgaaccaaatccatgggaaactaccgaatctgtcatcgacaagcttgagttatgttaacttgtcttctaatctattttctggcgcattgccatcattttctcctatgctcagggagttgtatctctcgaataacatgttttctgagccgttgtcttccttctgtgcaacgcaggctccaaatttggagtatcttgacatttctaagaacctattgtctgggaagcttcctaattgttggatgcaatttcaaattttgtttctattcaatttgggaaagaataaattatctggaaaaataccaagctcgttaggcaatctacagggaattgcgatattgcgtttacatgataacaacttttcaggagaattgccttctttagagaactgtaccctattaacaatggttgaccttggcaacaataacttgtcgggaaagataccaacatggattggccaaagcctaacaaacttggtgattctacgcttacggtcaaatgagtttaatggaatcatacccttctccctgtgcagtctagctgccattcatgttttggacctttctcacaacaatatgtcaggaggcttgccacattgcttcaataacataactgctttggctgatgataatattggagttggtgaaaatgtggaacttgtgtggaaaggaatagaaagagagtttcccaatcttgaccgtatgagaagcattgacatttcaagcaactatttgattggggaaattccgccgagtgtagcaagtatgacagagttgatttctctgaacctgtctagaaacaaattgacgggaaagcttcctgaagactttggtaacatgaagctgttggaatctcttgatttgtcaagaaaccggatatctggtaaaattccaacaagttttgcgagcttaaactttcttggtgtcttggacttatcacacaacaacttgtcaggaagaattccatcaggcacccaacttcagggttttaatgcttcacaatatatgggaaatcttggactttgtggaccaccgctgacacaaagttgtccaggagaaggaacagttcaagatgatggaatcgcgagaggaactgaaattgataacaaagaacaggttagtgatggtctcataaaccttggattctttattagtgcagtgctgggatttgtcactggattttggatggtctgcggcagtttactgcttaagacttcttggagatatgcttattttagattcctggacaatgcaaaagattggatttgtgtcaaaactgttgtgtacaaggcaaaagtgcggaggacacttcaaagataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1037

Amino Acids

114.11

Weight (kDa)

5.61

Isoelectric Point (pI)

37.88

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000028)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g45420 FvH4_4g14031 FvH4_5g20780 FvH4_6g28530 FvH4_7g14020 FvH4_7g14030 FvH4_7g14040 FvH4_7g14050 FvH4_7g14060 FvH4_7g14070 FvH4_7g14090 FvH4_7g14110 FvH4_7g14140 FvH4_7g14450
malus_domestica MD00G1189100.v1.1 MD01G1018600.v1.1 MD01G1053800.v1.1 MD01G1053900.v1.1 MD01G1054000.v1.1 MD01G1054100.v1.1 MD01G1056700.v1.1 MD01G1057000.v1.1 MD01G1057300.v1.1 MD01G1057400.v1.1 MD01G1061600.v1.1 MD01G1061800.v1.1 MD01G1061900.v1.1 MD01G1062000.v1.1 MD01G1062400.v1.1 MD01G1062500.v1.1 MD01G1063200.v1.1 MD01G1063300.v1.1 MD01G1063400.v1.1 MD01G1063700.v1.1 MD01G1063900.v1.1 MD01G1064200.v1.1 MD01G1064300.v1.1 MD01G1064400.v1.1 MD01G1064600.v1.1 MD01G1064700.v1.1 MD01G1181100.v1.1 MD01G1212300.v1.1 MD01G1212500.v1.1 MD01G1212600.v1.1 MD02G1271900.v1.1 MD07G1136500.v1.1 MD07G1139300.v1.1 MD07G1141200.v1.1 MD07G1144700.v1.1 MD08G1144200.v1.1 MD14G1186300.v1.1 MD14G1186500.v1.1 MD14G1186700.v1.1 MD14G1186800.v1.1 MD15G1351300.v1.1 MD15G1439500.v1.1
prunus_persica Prupe.1G067000_v2.0.a1 Prupe.2G077400_v2.0.a1 Prupe.2G077700_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078600_v2.0.a1 Prupe.2G078800_v2.0.a1 Prupe.2G099600_v2.0.a1 Prupe.2G099700_v2.0.a1 Prupe.2G155100_v2.0.a1 Prupe.2G155500_v2.0.a1 Prupe.2G155600_v2.0.a1 Prupe.2G155800_v2.0.a1 Prupe.2G155900_v2.0.a1 Prupe.2G156100_v2.0.a1 Prupe.2G166100_v2.0.a1 Prupe.2G166300_v2.0.a1 Prupe.2G167500_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G168400_v2.0.a1 Prupe.2G168700_v2.0.a1 Prupe.2G168800_v2.0.a1 Prupe.2G169000_v2.0.a1 Prupe.2G169100_v2.0.a1 Prupe.2G169200_v2.0.a1 Prupe.2G169500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G172300_v2.0.a1 Prupe.2G304800_v2.0.a1 Prupe.4G264800_v2.0.a1 Prupe.4G265000_v2.0.a1 Prupe.5G051900_v2.0.a1 Prupe.5G052000_v2.0.a1
pyrus_communis pycom01g08380 pycom01g08430 pycom01g08490 pycom01g08520 pycom01g08540 pycom01g08550 pycom01g08600 pycom01g08630 pycom01g08660 pycom01g08720 pycom01g09180 pycom01g09200 pycom01g09210 pycom01g09270 pycom01g09280 pycom01g09300 pycom01g09380 pycom01g19110 pycom01g22260 pycom01g22310 pycom01g22330 pycom01g22350 pycom01g22360 pycom02g23250 pycom07g13420 pycom07g13670 pycom07g13900 pycom07g13910 pycom07g13960 pycom07g13970 pycom07g25680 pycom11g22830
rosa_chinensis RchiOBHm_Chr0c22g0500431 RchiOBHm_Chr0c22g0500441 RchiOBHm_Chr0c22g0500561 RchiOBHm_Chr0c22g0500571 RchiOBHm_Chr0c22g0500611 RchiOBHm_Chr0c22g0500621 RchiOBHm_Chr0c22g0500631 RchiOBHm_Chr0c22g0500681 RchiOBHm_Chr1g0348221 RchiOBHm_Chr1g0348251 RchiOBHm_Chr1g0352861 RchiOBHm_Chr1g0352871 RchiOBHm_Chr1g0352891 RchiOBHm_Chr1g0352901 RchiOBHm_Chr1g0354671 RchiOBHm_Chr1g0354701 RchiOBHm_Chr1g0354711 RchiOBHm_Chr1g0354751 RchiOBHm_Chr1g0354761 RchiOBHm_Chr1g0354841 RchiOBHm_Chr1g0354851 RchiOBHm_Chr1g0354881 RchiOBHm_Chr1g0354971 RchiOBHm_Chr1g0354981 RchiOBHm_Chr1g0354991 RchiOBHm_Chr1g0355001 RchiOBHm_Chr1g0355011 RchiOBHm_Chr1g0355021 RchiOBHm_Chr1g0355861 RchiOBHm_Chr1g0379671 RchiOBHm_Chr1g0379681 RchiOBHm_Chr2g0096591 RchiOBHm_Chr2g0132821 RchiOBHm_Chr3g0454901 RchiOBHm_Chr3g0472711 RchiOBHm_Chr4g0400791 RchiOBHm_Chr5g0069481 RchiOBHm_Chr5g0069511 RchiOBHm_Chr5g0069551 RchiOBHm_Chr6g0254651 RchiOBHm_Chr6g0259721 RchiOBHm_Chr7g0205911 RchiOBHm_Chr7g0206401 RchiOBHm_Chr7g0206571 RchiOBHm_Chr7g0206581 RchiOBHm_Chr7g0206621 RchiOBHm_Chr7g0206631 RchiOBHm_Chr7g0206641 RchiOBHm_Chr7g0206681 RchiOBHm_Chr7g0206691 RchiOBHm_Chr7g0206751 RchiOBHm_Chr7g0206761 RchiOBHm_Chr7g0206851 RchiOBHm_Chr7g0206911 RchiOBHm_Chr7g0206921 RchiOBHm_Chr7g0207001 RchiOBHm_Chr7g0207011 RchiOBHm_Chr7g0207031 RchiOBHm_Chr7g0207101 RchiOBHm_Chr7g0207161 RchiOBHm_Chr7g0207201 RchiOBHm_Chr7g0207271 RchiOBHm_Chr7g0207301 RchiOBHm_Chr7g0207311 RchiOBHm_Chr7g0207421 RchiOBHm_Chr7g0207481 RchiOBHm_Chr7g0207491 RchiOBHm_Chr7g0207501 RchiOBHm_Chr7g0207521 RchiOBHm_Chr7g0207531 RchiOBHm_Chr7g0207561 RchiOBHm_Chr7g0207571 RchiOBHm_Chr7g0207581 RchiOBHm_Chr7g0207601 RchiOBHm_Chr7g0207621 RchiOBHm_Chr7g0207631 RchiOBHm_Chr7g0207651 RchiOBHm_Chr7g0207661 RchiOBHm_Chr7g0207711 RchiOBHm_Chr7g0207761 RchiOBHm_Chr7g0207801 RchiOBHm_Chr7g0208821 RchiOBHm_Chr7g0208831 RchiOBHm_Chr7g0208841 RchiOBHm_Chr7g0213601 RchiOBHm_Chr7g0215981 RchiOBHm_Chr7g0216021
rosa_laevigata RLG00000003193 RLG00000003194 RLG00000003287 RLG00000003288 RLG00000003289 RLG00000003293 RLG00000003294 RLG00000003295 RLG00000003297 RLG00000003299 RLG00000003301 RLG00000003327 RLG00000003347 RLG00000016653 RLG00000018642 RLG00000018643 RLG00000019285 RLG00000022542 RLG00000026368 RLG00000026371 RLG00000028124 RLG00000028125 RLG00000028183 RLG00000028184 RLG00000028185 RLG00000028188 RLG00000028673 RLG00000029267 RLG00000029325 RLG00000029674 RLG00000032883 RLG00000036055 RLG00000036058 RLG00000036065 RLG00000036068 RLG00000036071 RLG00000036072 RLG00000036075 RLG00000036076
rosa_multiflora Rmu_co8250183.1_g000001 Rmu_co8271981.1_g000001 Rmu_co8410829.1_g000001 Rmu_co8432879.1_g000001 Rmu_co8441941.1_g000001 Rmu_sc0000076.1_g000031 Rmu_sc0000738.1_g000038 Rmu_sc0000848.1_g000003 Rmu_sc0000848.1_g000014 Rmu_sc0000848.1_g000015 Rmu_sc0000848.1_g000016 Rmu_sc0001264.1_g000001 Rmu_sc0002284.1_g000018 Rmu_sc0002356.1_g000011 Rmu_sc0003020.1_g000003 Rmu_sc0003115.1_g000001 Rmu_sc0003115.1_g000002 Rmu_sc0003115.1_g000003 Rmu_sc0003115.1_g000004 Rmu_sc0003115.1_g000005 Rmu_sc0003115.1_g000008 Rmu_sc0003115.1_g000010 Rmu_sc0003115.1_g000011 Rmu_sc0003115.1_g000014 Rmu_sc0003565.1_g000002 Rmu_sc0003652.1_g000013 Rmu_sc0003652.1_g000015 Rmu_sc0003652.1_g000016 Rmu_sc0003652.1_g000019 Rmu_sc0003940.1_g000001 Rmu_sc0003940.1_g000004 Rmu_sc0003940.1_g000009 Rmu_sc0004084.1_g000010 Rmu_sc0004705.1_g000021 Rmu_sc0004972.1_g000007 Rmu_sc0004987.1_g000002 Rmu_sc0004987.1_g000006 Rmu_sc0005065.1_g000018 Rmu_sc0005065.1_g000029 Rmu_sc0005391.1_g000002 Rmu_sc0005633.1_g000003 Rmu_sc0005633.1_g000008 Rmu_sc0006632.1_g000014 Rmu_sc0006632.1_g000018 Rmu_sc0006681.1_g000010 Rmu_sc0006681.1_g000011 Rmu_sc0006733.1_g000003 Rmu_sc0007385.1_g000005 Rmu_sc0007385.1_g000007 Rmu_sc0007385.1_g000009 Rmu_sc0007385.1_g000016 Rmu_sc0007645.1_g000002 Rmu_sc0007645.1_g000003 Rmu_sc0007645.1_g000022 Rmu_sc0007828.1_g000008 Rmu_sc0008509.1_g000003 Rmu_sc0008509.1_g000015 Rmu_sc0008509.1_g000016 Rmu_sc0008509.1_g000020 Rmu_sc0008509.1_g000030 Rmu_sc0008509.1_g000041 Rmu_sc0008756.1_g000001 Rmu_sc0008756.1_g000003 Rmu_sc0013028.1_g000002 Rmu_sc0013028.1_g000003 Rmu_sc0013028.1_g000005 Rmu_sc0013160.1_g000001 Rmu_sc0014454.1_g000009 Rmu_sc0014455.1_g000007 Rmu_sc0014659.1_g000004 Rmu_sc0017798.1_g000002 Rmu_sc0017798.1_g000004 Rmu_sc0029608.1_g000001 Rmu_sc0037861.1_g000001 Rmu_sc0038750.1_g000001 Rmu_sc0042995.1_g000001 Rmu_ssc0000161.1_g000017
rosa_roxburghii Rroxscaffold_1G00009180 Rroxscaffold_1G00009190 Rroxscaffold_1G00011450 Rroxscaffold_1G00011480 Rroxscaffold_2G00111660 Rroxscaffold_2G00113570 Rroxscaffold_2G00122140 Rroxscaffold_3G00243730 Rroxscaffold_3G00245750 Rroxscaffold_3G00245760 Rroxscaffold_3G00250220 Rroxscaffold_3G00251160 Rroxscaffold_3G00251270 Rroxscaffold_3G00251280 Rroxscaffold_3G00251300 Rroxscaffold_3G00251340 Rroxscaffold_3G00251350 Rroxscaffold_3G00251390 Rroxscaffold_3G00251400 Rroxscaffold_3G00251560 Rroxscaffold_3G00251570 Rroxscaffold_3G00251870 Rroxscaffold_3G00252200 Rroxscaffold_3G00252210 Rroxscaffold_4G00279970 Rroxscaffold_4G00299970 Rroxscaffold_4G00300760 Rroxscaffold_4G00300780 Rroxscaffold_4G00300810 Rroxscaffold_4G00300850 Rroxscaffold_4G00307080 Rroxscaffold_4G00307100 Rroxscaffold_4G00313990 Rroxscaffold_6G00405080
rosa_rugosa Rorug01G0193600 Rorug01G0193700 Rorug01G0243800 Rorug01G0244000 Rorug01G0244000 Rorug01G0244400 Rorug01G0414300.1 Rorug01G0414500 Rorug01G0414600 Rorug02G0235600 Rorug02G0307900 Rorug02G0583100 Rorug02G0583200 Rorug02G0583300 Rorug05G0398000 Rorug05G0398100 Rorug05G0398200 Rorug05G0580300 Rorug05G0590300 Rorug06G0116000 Rorug06G0116100 Rorug07G0096800 Rorug07G0097100.1 Rorug07G0097200 Rorug07G0098600 Rorug07G0098600 Rorug07G0098700 Rorug07G0099100 Rorug07G0106100 Rorug07G0106200 Rorug07G0106200 Rorug07G0106300 Rorug07G0157600 Rorug07G0157700 Rorug07G0157700 Rorug07G0157800
rosa_samantha Rh1AG255500 Rh1AG256700 Rh1BG225800 Rh1BG226200 Rh1BG230000 Rh1CG195300 Rh1CG238400 Rh1CG238500 Rh1CG238900 Rh1CG239000 Rh1CG239300 Rh1CG239400 Rh1CG239800 Rh1CG240000 Rh1CG240200 Rh1CG240300 Rh1CG244300 Rh1CG406900 Rh1CG407300 Rh1CG407400 Rh2CG343600 Rh2DG383200 Rh3BG205900 Rh4AG404400 Rh4BG415500 Rh5AG455200 Rh5AG455600 Rh5CG497000 Rh5CG497200 Rh7AG228800 Rh7AG230400 Rh7AG230800 Rh7AG231200 Rh7AG231600 Rh7AG231800 Rh7AG232100 Rh7AG241600 Rh7BG236200 Rh7CG238200 Rh7CG239100 Rh7CG243400 Rh7CG244900
rosa_wichuraiana Rw0G023040 Rw1G017780 Rw1G022320 Rw1G022340 Rw1G022410 Rw1G022420 Rw1G022440 Rw1G022460 Rw1G022490 Rw1G022500 Rw1G022530 Rw1G022550 Rw1G022560 Rw1G022600 Rw1G023060 Rw1G038150 Rw1G038160 Rw2G008210 Rw2G022350 Rw2G029290 Rw4G015050 Rw4G019850 Rw5G024060 Rw5G042460 Rw7G019160 Rw7G019460 Rw7G019690 Rw7G019830 Rw7G019860 Rw7G019880 Rw7G019890 Rw7G019930 Rw7G019990 Rw7G020460 Rw7G025100 Rw7G025120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 1148, 2765
AccB7I CCANNNNNTGG 1 cut(s) 285
AccII CGCG 1 cut(s) 2879
AciI CCGC 4 cut(s) 2543, 2828, 2988, 3094
AclWI GGATC 3 cut(s) 1575, 1747, 1770
AcoI YGGCCR 3 cut(s) 48, 926, 2251
AcuI CTGAAG 3 cut(s) 950, 2637, 2759
AfaI GTAC 2 cut(s) 2188, 3080
AfiI CCNNNNNNNGG 7 cut(s) 285, 458, 605, 752, 1372, 2776, 2852
AflII CTTAAG 1 cut(s) 3002
AflIII ACRYGT 1 cut(s) 1932
AjnI CCWGG 3 cut(s) 45, 2845, 3036
Alw21I GWGCWC 2 cut(s) 414, 1604
Alw26I GTCTC 1 cut(s) 2927
AlwI GGATC 3 cut(s) 1575, 1747, 1770
Ama87I CYCGRG 1 cut(s) 1454
AoxI GGCC 5 cut(s) 48, 145, 926, 1663, 2251
ApaI GGGCCC 1 cut(s) 1667
ApeKI GCWGC 4 cut(s) 198, 1104, 1251, 2336
ArsI GACNNNNNNTTYG 2 cut(s) 1271, 1303
AseI ATTAAT 1 cut(s) 1020
AspLEI GCGC 1 cut(s) 1883
AspS9I GGNCC 8 cut(s) 340, 440, 587, 734, 1663, 1664, 2353, 2822
AsuHPI GGTGA 3 cut(s) 305, 2284, 2450
AvaI CYCGRG 1 cut(s) 1454
AvaII GGWCC 6 cut(s) 340, 440, 587, 734, 2353, 2822
BaeGI GKGCMC 1 cut(s) 1667
BalI TGGCCA 3 cut(s) 50, 928, 2253
BanI GGYRCC 2 cut(s) 1148, 2765
BanII GRGCYC 3 cut(s) 414, 1604, 1667
BarI GAAGNNNNNNTAC 2 cut(s) 1209, 1241
BbsI GAAGAC 4 cut(s) 1156, 1854, 1944, 2625
Bbv12I GWGCWC 2 cut(s) 414, 1604
BbvI GCAGC 4 cut(s) 185, 1116, 1263, 2323
BccI CCATC 6 cut(s) 1160, 1897, 2767, 2864, 2912, 2974
BceAI ACGGC 1 cut(s) 1930
BciT130I CCWGG 3 cut(s) 47, 2847, 3038
BciVI GTATCC 1 cut(s) 1218
BcoDI GTCTC 1 cut(s) 2927
BfaI CTAG 6 cut(s) 251, 851, 1184, 1476, 2333, 2589
BfmI CTRYAG 1 cut(s) 2117
BfrI CTTAAG 1 cut(s) 3002
BfuI GTATCC 1 cut(s) 1218
BglII AGATCT 4 cut(s) 253, 1195, 1420, 1789
BisI GCNGC 5 cut(s) 199, 1105, 1252, 2337, 2989
BlsI GCNGC 5 cut(s) 200, 1106, 1253, 2338, 2990
Bme1390I CCNGG 3 cut(s) 47, 2847, 3038
Bme18I GGWCC 6 cut(s) 340, 440, 587, 734, 2353, 2822
BmeT110I CYCGRG 1 cut(s) 1454
BmgT120I GGNCC 8 cut(s) 340, 440, 587, 734, 1663, 1664, 2353, 2822
BmiI GGNNCC 4 cut(s) 1150, 1665, 1974, 2767
BmrFI CCNGG 3 cut(s) 47, 2847, 3038
BmrI ACTGGG 1 cut(s) 970
BmsI GCATC 2 cut(s) 578, 2028
BmuI ACTGGG 1 cut(s) 970
BpiI GAAGAC 4 cut(s) 1156, 1854, 1944, 2625
Bpu10I CCTNAGC 2 cut(s) 1598, 1907
BpuEI CTTGAG 4 cut(s) 58, 898, 1375, 1864
BsaBI GATNNNNATC 2 cut(s) 996, 1611
BsaI GGTCTC 1 cut(s) 2927
BsaJI CCNNGG 4 cut(s) 1347, 1810, 2209, 2932
BsaWI WCCGGW 1 cut(s) 2667
BsaXI ACNNNNNCTCC 2 cut(s) 1957, 1987
Bsc4I CCNNNNNNNGG 7 cut(s) 285, 458, 605, 752, 1372, 2776, 2852
Bse1I ACTGG 3 cut(s) 976, 1636, 2974
Bse3DI GCAATG 4 cut(s) 51, 1379, 1883, 2389
Bse8I GATNNNNATC 2 cut(s) 996, 1611
BseBI CCWGG 3 cut(s) 47, 2847, 3038
BseDI CCNNGG 4 cut(s) 1347, 1810, 2209, 2932
BseGI GGATG 4 cut(s) 160, 1152, 2043, 2985
BseJI GATNNNNATC 2 cut(s) 996, 1611
BseLI CCNNNNNNNGG 7 cut(s) 285, 458, 605, 752, 1372, 2776, 2852
BseMI GCAATG 4 cut(s) 51, 1379, 1883, 2389
BseMII CTCAG 8 cut(s) 358, 533, 680, 1194, 1320, 1589, 1921, 1932
BseNI ACTGG 3 cut(s) 976, 1636, 2974
BseSI GKGCMC 1 cut(s) 1667
BseXI GCAGC 4 cut(s) 185, 1116, 1263, 2323
BseYI CCCAGC 2 cut(s) 1666, 2956
BsgI GTGCAG 2 cut(s) 2347, 2970
Bsh1236I CGCG 1 cut(s) 2879
BshFI GGCC 5 cut(s) 50, 147, 928, 1665, 2253
BshNI GGYRCC 2 cut(s) 1148, 2765
BsiHKAI GWGCWC 2 cut(s) 414, 1604
BsiHKCI CYCGRG 1 cut(s) 1454
BsiSI CCGG 2 cut(s) 1385, 2668
BslI CCNNNNNNNGG 7 cut(s) 285, 458, 605, 752, 1372, 2776, 2852
BsmAI GTCTC 1 cut(s) 2927
BsmI GAATGC 1 cut(s) 19
BsnI GGCC 5 cut(s) 50, 147, 928, 1665, 2253
Bso31I GGTCTC 1 cut(s) 2927
BsoBI CYCGRG 1 cut(s) 1454
Bsp120I GGGCCC 1 cut(s) 1663
Bsp1286I GDGCHC 3 cut(s) 414, 1604, 1667
Bsp1407I TGTACA 1 cut(s) 3078
Bsp19I CCATGG 1 cut(s) 1810
Bsp68I TCGCGA 1 cut(s) 2879
BspACI CCGC 4 cut(s) 2543, 2828, 2988, 3094
BspANI GGCC 5 cut(s) 50, 147, 928, 1665, 2253
BspCNI CTCAG 8 cut(s) 357, 534, 681, 1195, 1321, 1590, 1920, 1933
BspFNI CGCG 1 cut(s) 2879
BspLI GGNNCC 4 cut(s) 1150, 1665, 1974, 2767
BspPI GGATC 3 cut(s) 1575, 1747, 1770
BspQI GCTCTTC 1 cut(s) 132
BspT107I GGYRCC 2 cut(s) 1148, 2765
BspTI CTTAAG 1 cut(s) 3002
BspTNI GGTCTC 1 cut(s) 2927
BsrDI GCAATG 4 cut(s) 51, 1379, 1883, 2389
BsrGI TGTACA 1 cut(s) 3078
BsrI ACTGG 3 cut(s) 976, 1636, 2974
BssECI CCNNGG 4 cut(s) 1347, 1810, 2209, 2932
BssT1I CCWWGG 4 cut(s) 1347, 1810, 2209, 2932
Bst2UI CCWGG 3 cut(s) 47, 2847, 3038
Bst4CI ACNGT 6 cut(s) 824, 2186, 2289, 2495, 2860, 3073
Bst6I CTCTTC 3 cut(s) 132, 1041, 1135
BstAFI CTTAAG 1 cut(s) 3002
BstAUI TGTACA 1 cut(s) 3078
BstC8I GCNNGC 7 cut(s) 123, 220, 944, 1175, 1971, 2384, 2701
BstDSI CCRYGG 1 cut(s) 1810
BstF5I GGATG 4 cut(s) 160, 1152, 2043, 2985
BstFNI CGCG 1 cut(s) 2879
BstHHI GCGC 1 cut(s) 1883
BstMAI GTCTC 1 cut(s) 2927
BstMWI GCNNNNNNNGC 3 cut(s) 1662, 1970, 2109
BstNI CCWGG 3 cut(s) 47, 2847, 3038
BstNSI RCATGY 5 cut(s) 125, 222, 428, 1177, 1936
BstSCI CCNGG 3 cut(s) 45, 2845, 3036
BstSFI CTRYAG 1 cut(s) 2117
BstSLI GKGCMC 1 cut(s) 1667
BstUI CGCG 1 cut(s) 2879
BstV1I GCAGC 4 cut(s) 185, 1116, 1263, 2323
BstV2I GAAGAC 4 cut(s) 1156, 1854, 1944, 2625
BstX2I RGATCY 6 cut(s) 253, 1195, 1420, 1567, 1762, 1789
BstXI CCANNNNNNTGG 1 cut(s) 1811
BstYI RGATCY 6 cut(s) 253, 1195, 1420, 1567, 1762, 1789
BsuI GTATCC 1 cut(s) 1218
BsuRI GGCC 5 cut(s) 50, 147, 928, 1665, 2253
BtgI CCRYGG 1 cut(s) 1810
BtsCI GGATG 4 cut(s) 160, 1152, 2043, 2985
BtsI GCAGTG 1 cut(s) 2958
BtsIMutI CAGTG 6 cut(s) 442, 589, 736, 983, 2958, 2967
BtuMI TCGCGA 1 cut(s) 2879
Cac8I GCNNGC 7 cut(s) 123, 220, 944, 1175, 1971, 2384, 2701
CfoI GCGC 1 cut(s) 1883
Cfr13I GGNCC 8 cut(s) 340, 440, 587, 734, 1663, 1664, 2353, 2822
Csp6I GTAC 2 cut(s) 2187, 3079
CviQI GTAC 2 cut(s) 2187, 3079
EaeI YGGCCR 3 cut(s) 48, 926, 2251
Eam1104I CTCTTC 3 cut(s) 132, 1041, 1135
EarI CTCTTC 3 cut(s) 132, 1041, 1135
EciI GGCGGA 1 cut(s) 2532
Ecl136II GAGCTC 2 cut(s) 412, 1602
Eco130I CCWWGG 4 cut(s) 1347, 1810, 2209, 2932
Eco147I AGGCCT 1 cut(s) 147
Eco24I GRGCYC 3 cut(s) 414, 1604, 1667
Eco31I GGTCTC 1 cut(s) 2927
Eco32I GATATC 1 cut(s) 2673
Eco47I GGWCC 6 cut(s) 340, 440, 587, 734, 2353, 2822
Eco53kI GAGCTC 2 cut(s) 412, 1602
Eco57I CTGAAG 3 cut(s) 950, 2637, 2759
Eco88I CYCGRG 1 cut(s) 1454
EcoICRI GAGCTC 2 cut(s) 412, 1602
EcoRI GAATTC 2 cut(s) 1504, 2754
EcoRII CCWGG 3 cut(s) 45, 2845, 3036
EcoRV GATATC 1 cut(s) 2673
EcoT14I CCWWGG 4 cut(s) 1347, 1810, 2209, 2932
EcoT22I ATGCAT 1 cut(s) 21
EcoT38I GRGCYC 3 cut(s) 414, 1604, 1667
ErhI CCWWGG 4 cut(s) 1347, 1810, 2209, 2932
FauNDI CATATG 1 cut(s) 718
Fnu4HI GCNGC 5 cut(s) 199, 1105, 1252, 2337, 2989
FokI GGATG 4 cut(s) 167, 1139, 2050, 2992
FriOI GRGCYC 3 cut(s) 414, 1604, 1667
Fsp4HI GCNGC 5 cut(s) 199, 1105, 1252, 2337, 2989
FspBI CTAG 6 cut(s) 251, 851, 1184, 1476, 2333, 2589
GlaI GCGC 1 cut(s) 1882
GluI GCNGC 5 cut(s) 199, 1105, 1252, 2337, 2989
GsaI CCCAGC 2 cut(s) 1670, 2960
HaeIII GGCC 5 cut(s) 50, 147, 928, 1665, 2253
HapII CCGG 2 cut(s) 1385, 2668
HhaI GCGC 1 cut(s) 1883
Hin6I GCGC 1 cut(s) 1881
HinP1I GCGC 1 cut(s) 1881
HincII GTYRAC 3 cut(s) 1266, 1855, 2206
HindII GTYRAC 3 cut(s) 1266, 1855, 2206
HindIII AAGCTT 3 cut(s) 1840, 2021, 2609
HpaI GTTAAC 1 cut(s) 1855
HpaII CCGG 2 cut(s) 1385, 2668
HphI GGTGA 3 cut(s) 305, 2284, 2450
Hpy188I TCNGA 8 cut(s) 262, 543, 690, 1204, 1291, 1606, 1942, 2580
HpyAV CCTTC 9 cut(s) 315, 503, 650, 995, 1211, 1966, 2181, 2326, 2846
HpyCH4III ACNGT 6 cut(s) 824, 2186, 2289, 2495, 2860, 3073
HpyCH4IV ACGT 1 cut(s) 1396
HpyF10VI GCNNNNNNNGC 3 cut(s) 1662, 1970, 2109
HpySE526I ACGT 1 cut(s) 1396
HspAI GCGC 1 cut(s) 1881
KspAI GTTAAC 1 cut(s) 1855
LguI GCTCTTC 1 cut(s) 132
LmnI GCTCC 2 cut(s) 92, 1978
Lsp1109I GCAGC 4 cut(s) 185, 1116, 1263, 2323
LweI GCATC 2 cut(s) 578, 2028
MaeI CTAG 6 cut(s) 251, 851, 1184, 1476, 2333, 2589
MaeII ACGT 1 cut(s) 1396
MaeIII GTNAC 5 cut(s) 824, 980, 1186, 2627, 2965
MfeI CAATTG 4 cut(s) 401, 548, 695, 1283
MflI RGATCY 6 cut(s) 253, 1195, 1420, 1567, 1762, 1789
MhlI GDGCHC 3 cut(s) 414, 1604, 1667
MlsI TGGCCA 3 cut(s) 50, 928, 2253
MluNI TGGCCA 3 cut(s) 50, 928, 2253
MlyI GAGTC 6 cut(s) 152, 406, 553, 700, 1268, 1298
MmeI TCCRAC 7 cut(s) 61, 114, 186, 1158, 2015, 2622, 2711
Mox20I TGGCCA 3 cut(s) 50, 928, 2253
Mph1103I ATGCAT 1 cut(s) 21
MscI TGGCCA 3 cut(s) 50, 928, 2253
MslI CAYNNNNRTG 1 cut(s) 1172
Msp20I TGGCCA 3 cut(s) 50, 928, 2253
MspA1I CMGCKG 1 cut(s) 2830
MspCI CTTAAG 1 cut(s) 3002
MspI CCGG 2 cut(s) 1385, 2668
MspR9I CCNGG 3 cut(s) 47, 2847, 3038
MunI CAATTG 4 cut(s) 401, 548, 695, 1283
Mva1269I GAATGC 1 cut(s) 19
MvaI CCWGG 3 cut(s) 47, 2847, 3038
MvnI CGCG 1 cut(s) 2879
MwoI GCNNNNNNNGC 3 cut(s) 1662, 1970, 2109
NcoI CCATGG 1 cut(s) 1810
NdeI CATATG 1 cut(s) 718
NlaIV GGNNCC 4 cut(s) 1150, 1665, 1974, 2767
NmeAIII GCCGAG 1 cut(s) 2571
NmuCI GTSAC 1 cut(s) 2965
NruI TCGCGA 1 cut(s) 2879
NsiI ATGCAT 1 cut(s) 21
NspI RCATGY 5 cut(s) 125, 222, 428, 1177, 1936
PaeI GCATGC 3 cut(s) 125, 222, 1177
PceI AGGCCT 1 cut(s) 147
PciI ACATGT 1 cut(s) 1932
PciSI GCTCTTC 1 cut(s) 132
PctI GAATGC 1 cut(s) 19
PflMI CCANNNNNTGG 1 cut(s) 285
PfoI TCCNGGA 2 cut(s) 2845, 3036
PkrI GCNGC 5 cut(s) 200, 1106, 1253, 2338, 2990
PleI GAGTC 6 cut(s) 152, 405, 552, 699, 1267, 1298
PpsI GAGTC 6 cut(s) 152, 405, 552, 699, 1267, 1298
PscI ACATGT 1 cut(s) 1932
PshBI ATTAAT 1 cut(s) 1020
Psp124BI GAGCTC 2 cut(s) 414, 1604
Psp6I CCWGG 3 cut(s) 45, 2845, 3036
PspFI CCCAGC 2 cut(s) 1666, 2956
PspGI CCWGG 3 cut(s) 45, 2845, 3036
PspN4I GGNNCC 4 cut(s) 1150, 1665, 1974, 2767
PspOMI GGGCCC 1 cut(s) 1663
PspPI GGNCC 8 cut(s) 340, 440, 587, 734, 1663, 1664, 2353, 2822
PsuI RGATCY 6 cut(s) 253, 1195, 1420, 1567, 1762, 1789
RruI TCGCGA 1 cut(s) 2879
RsaI GTAC 2 cut(s) 2188, 3080
RsaNI GTAC 2 cut(s) 2187, 3079
RseI CAYNNNNRTG 1 cut(s) 1172
SacI GAGCTC 2 cut(s) 414, 1604
SapI GCTCTTC 1 cut(s) 132
SatI GCNGC 5 cut(s) 199, 1105, 1252, 2337, 2989
Sau96I GGNCC 8 cut(s) 340, 440, 587, 734, 1663, 1664, 2353, 2822
SchI GAGTC 6 cut(s) 152, 406, 553, 700, 1268, 1298
ScrFI CCNGG 3 cut(s) 47, 2847, 3038
SduI GDGCHC 3 cut(s) 414, 1604, 1667
SfaNI GCATC 2 cut(s) 578, 2028
SfcI CTRYAG 1 cut(s) 2117
SinI GGWCC 6 cut(s) 340, 440, 587, 734, 2353, 2822
SmiMI CAYNNNNRTG 1 cut(s) 1172
SmlI CTYRAG 5 cut(s) 73, 877, 1354, 1843, 3002
SmoI CTYRAG 5 cut(s) 73, 877, 1354, 1843, 3002
SphI GCATGC 3 cut(s) 125, 222, 1177
SseBI AGGCCT 1 cut(s) 147
SsiI CCGC 4 cut(s) 2543, 2828, 2988, 3094
SspI AATATT 2 cut(s) 1080, 2428
SspMI CTAG 6 cut(s) 251, 851, 1184, 1476, 2333, 2589
SstI GAGCTC 2 cut(s) 414, 1604
StuI AGGCCT 1 cut(s) 147
StyD4I CCNGG 3 cut(s) 45, 2845, 3036
StyI CCWWGG 4 cut(s) 1347, 1810, 2209, 2932
TaaI ACNGT 6 cut(s) 824, 2186, 2289, 2495, 2860, 3073
TaiI ACGT 1 cut(s) 1399
TaqI TCGA 3 cut(s) 273, 1835, 1925
TatI WGTACW 1 cut(s) 3078
TauI GCSGC 1 cut(s) 2991
TscAI CASTG 6 cut(s) 442, 589, 736, 983, 2958, 2974
TseFI GTSAC 1 cut(s) 2965
TseI GCWGC 4 cut(s) 198, 1104, 1251, 2336
Tsp45I GTSAC 1 cut(s) 2965
TspDTI ATGAA 7 cut(s) 373, 520, 667, 813, 1814, 2333, 2648
TspRI CASTG 6 cut(s) 442, 589, 736, 983, 2958, 2974
Van91I CCANNNNNTGG 1 cut(s) 285
Vha464I CTTAAG 1 cut(s) 3002
VpaK11BI GGWCC 6 cut(s) 340, 440, 587, 734, 2353, 2822
VspI ATTAAT 1 cut(s) 1020
XbaI TCTAGA 3 cut(s) 250, 850, 2588
XceI RCATGY 5 cut(s) 125, 222, 428, 1177, 1936
XcmI CCANNNNNNNNNTGG 1 cut(s) 2347
XspI CTAG 6 cut(s) 251, 851, 1184, 1476, 2333, 2589
Zsp2I ATGCAT 1 cut(s) 21
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.