RchiOBHm_Chr7g0206401

Leucine Rich repeat

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Forward (+)
24110772 .. 24113969
3198 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ18472

Sequence Viewer

Length: 3198 bp
ATGAAGCAACTCCATTGCTGTAGTTTTCAAAATCCTTTTGCTTCAGCTATATATACTTCACTTTGCAGGTTGCATATCATCTTCATAATTATGTTTTTCACCATAATGAGTGGTAGGTCTATGCATTATGTTTTTGTTGGGCTTGTGTGCCTGGCCCTTGCCTCTGCTATTTGTTGTTCAAGTGTTGGAAGCTCCAACAACATTATGTGCTTGGAGAGTGAAAGGCATGCTCTTCTCCACTTCAAACAAGGCCTTGTGGATGACTCCAATGCTCTTGCCTCTTGGAAAAGTGAGAAAGATTGCTGCAAGTGGAGAGGAATAGAATGCAACAACCAAACAGGTCATGTTACCAGTCTTGATTTCTCCTTTAATTATGATCCATATCTCTATTCTGCTGAAGTTCCTTTAAGTGGTGAAATTAGTCCTTCACTACTTGAATTGCGATATCTAAATTACTTGGACCTCAGTTATATTGATTTTGGAGAAAATATGATTCCCAAGTTCATTGGCTCTTTGAGTCCATTGAAAGAACTCAAACTTGCAGGTGCTAATTTCAGTGGACCTGTTTCTCCCCAACTTGGAAACCTCTCTAATTTGCACACTCTTGATCTTTCCTTCAATGATTTTGAAGGAATGATGATTCCCAAATTCATTGGCTCTCTGAGTCAATTGAAAGAACTCAAACTTGCAGATGCTAATTTCAGTGGACCTGTTCCTCCCCAACTTGGAAACCTCTCTAATTTGCACACTCTTGATCTTTCCTTCAATGATTTTGAAGGAATGATGATTCCCAAATTCATTGGCTCTCTGAGTCAATTGAAAGAACTCAAACTTGCAGATACTAATTTCAGTGGACCTGTTCCTCCCCAACTTGGAAACCTCTCTAATTTGCACACTCTTGATCTTTCCTCCAATGATTTTGAAGGAATGATGATTCCCAAATTCATTGGCTCTCTGAGTCAATTGAAAGAACTCAAACTTGCAGAAGCTAATTTCAGTGGACCTGTTCCTCCCCAACTTGGAAACTTCTCTAATTTGCATACTCTCGATCTTTCCAGGAACGAATATGTTCATTCAGAAAATCTTGAGTGGTTATCTCATCTTTCTTCCTTGAGATACCTGAACATGTCATATCTAGATTTGTCAAAGGTTGTGAATTGGCCACTATCTTTAAGCAAGCTCACTTTACTGACAGAGCTTCAGTTATCCGAGTGTAACCTTCCTGATGTCAATCTAAGATCACTTTCCTTTATTAATTCTTCCACCTCTCTTCAAATCCTTGACCTCTCTTATAACTCTCTTAATTGTTCAATATTTTATTGGATAGCCAATGTCAGCAACAACTTTGTCTATATTGGTCTCTCTTCCAACAATCTTAAAGGTCCCATCCCAGATGTCTTCACAAGCATGCTTTCTCTAGAGTCGTTGATCTTATATCGCAACCAATTGTCTAAAAACATTGAGGACTCTGTTAAAACCTTGTCTTGTGCTGAGAACACACTTGAGACCTTGGACTTGGGTGCTAACCTGTTTTGGGGGTCGTTGCCAGATTTGTCACGTTTTTCAAAGTTACGAGTGTTATATCTTGACGGGAATCAACTAAATGGGTCTGTACCCGAGAGTGTCGGGCAACTCTCTAGCCTTGAAACATTAATTCTCGACGGGAATTCTTTGAGTGGTGTCATAACAGAAACCCACTTTTTGAACCTCTCTCGTTTACATGATTTGAGTCTTTCTGATAATCGTTTCTCTATCAACCTGAGCTCTGATTGGAGGCCACCATTTCAACTTACTAGTATGTTAGACATGTCCTCTTGCAAGGTGGGCCCAGCTTTTCCCAAGTGGATTCTAACGCAGACAAATCTTACTGAGCTTTATCTCTCTAATGCTGGACTATCAGGAAGACTGCCGAATCTGTCATCGACAAGCTTGCGTTATGTTAACTTGTCTTCTAATCTACTTTCTGGTGCAGTGCCATCATTTTCTCCTATGCTCACGGACTTGTATCTCTCGAATAACATGTTTTCTGAGCCGTTGTCTTCCTTCTGTGCAACGCAGTCTCCATATTTAAGGTATGTTGACATTTCTAAGAACCTATTGTCTGGGGAGCTTCCTAATTGTTGGATGCAATTTCAAAAATTGTATCTATTCAATTTGGGAAAGAATAAATTATCTGGAAAAATACCAAGCTCGTTCGGCAATCTACAGGGAATTGGGATATTGCGTTTACATGATAACAACTTTTCAGGAGAATTGCCTTCTTTAGAGAACTGTACCAGATTATCAATGGTTGACCTTGGCAACAACAACTTGTCGGGAAAGATACCAACATGGATTGGCCAAAGCCTAACAAACTTGGTGATTCTACGCTTCCGGTCCAATGAGTTCAATGGAATCATACCCTTCTCCCTGTGCAATCTAGCCACCATTCATGTCTTGGACCTCTCTCACAACAATATTTCAGGAGGCTTGCCACATTGCTTCAATAACATAACCGCTTTGACTGATGATTTGGGAGTTGGTGGTTTTATTGTGGAACTTGTGTGGAAAGGAATAGAAATTGAGTTTCCCGATATTACAGGTTTGAGAAGCATTGACATTTCAAGCAACTATTTGATTGGGGAAATTCCGCTAAGTATAGCAAGTATGACAGAGTTGAAATCTCTGAACCTGTCTAGAAACAAATTGACGGGAAAGCTTCCTGAAGACTTTGGTAACATGAAGATGTTGGAATCTCTTGATTTGTCAAGAAACCGGATATCTGGTAAAATTCCTACAAGTTTTGCGAGCTTAAACTTTCTTAGTGTCTTGGACTTATCACACAACAACTTGTCAGGAAGAATTCCATCAGGCACCCAACTTCAGGGTTTTAATGCTTCTCAATATATGGGAAATCGTGGACTTTGTGGACCACCGCTGACACAAAGCTGTCCAGGAGATGGAACAGTTCAAGATGATGGAATCGTGAGAGGAACTGGAATTGATAACAAAGAACAGGTTAGTGATGGTCTCATAAACCTTGGATTCTTTATTAGTGCAGTGCTGGGATTTGTCACTGGATTTTGGATGGTCTGCGGCAGTTTACTGCTTAAGACTTCTTGGAGATATGCTTATTTCAGATTCCTGGACAATGCAAAAGATTGGATTTATGTCAAAACCAAGGCAAAAGTGCGGAGGACGCTTCAAGATAAATGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1065

Amino Acids

117.88

Weight (kDa)

5.74

Isoelectric Point (pI)

35.76

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 72 - 110 2.9e-12 Leucine rich repeat N-terminal domain
LRR_14 PF23598 140 - 253 1.2e-09 Leucine-rich repeat region
LRR_14 PF23598 265 - 484 3e-14 Leucine-rich repeat region
LRR_8 PF13855 861 - 920 2.1e-10 Leucine rich repeat
LRR_14 PF23598 880 - 943 4.9e-06 Leucine-rich repeat region
LRR_8 PF13855 886 - 944 1.3e-09 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000028)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g45420 FvH4_4g14031 FvH4_5g20780 FvH4_6g28530 FvH4_7g14020 FvH4_7g14030 FvH4_7g14040 FvH4_7g14050 FvH4_7g14060 FvH4_7g14070 FvH4_7g14090 FvH4_7g14110 FvH4_7g14140 FvH4_7g14450
malus_domestica MD00G1189100.v1.1 MD01G1018600.v1.1 MD01G1053800.v1.1 MD01G1053900.v1.1 MD01G1054000.v1.1 MD01G1054100.v1.1 MD01G1056700.v1.1 MD01G1057000.v1.1 MD01G1057300.v1.1 MD01G1057400.v1.1 MD01G1061600.v1.1 MD01G1061800.v1.1 MD01G1061900.v1.1 MD01G1062000.v1.1 MD01G1062400.v1.1 MD01G1062500.v1.1 MD01G1063200.v1.1 MD01G1063300.v1.1 MD01G1063400.v1.1 MD01G1063700.v1.1 MD01G1063900.v1.1 MD01G1064200.v1.1 MD01G1064300.v1.1 MD01G1064400.v1.1 MD01G1064600.v1.1 MD01G1064700.v1.1 MD01G1181100.v1.1 MD01G1212300.v1.1 MD01G1212500.v1.1 MD01G1212600.v1.1 MD02G1271900.v1.1 MD07G1136500.v1.1 MD07G1139300.v1.1 MD07G1141200.v1.1 MD07G1144700.v1.1 MD08G1144200.v1.1 MD14G1186300.v1.1 MD14G1186500.v1.1 MD14G1186700.v1.1 MD14G1186800.v1.1 MD15G1351300.v1.1 MD15G1439500.v1.1
prunus_persica Prupe.1G067000_v2.0.a1 Prupe.2G077400_v2.0.a1 Prupe.2G077700_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078600_v2.0.a1 Prupe.2G078800_v2.0.a1 Prupe.2G099600_v2.0.a1 Prupe.2G099700_v2.0.a1 Prupe.2G155100_v2.0.a1 Prupe.2G155500_v2.0.a1 Prupe.2G155600_v2.0.a1 Prupe.2G155800_v2.0.a1 Prupe.2G155900_v2.0.a1 Prupe.2G156100_v2.0.a1 Prupe.2G166100_v2.0.a1 Prupe.2G166300_v2.0.a1 Prupe.2G167500_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G168400_v2.0.a1 Prupe.2G168700_v2.0.a1 Prupe.2G168800_v2.0.a1 Prupe.2G169000_v2.0.a1 Prupe.2G169100_v2.0.a1 Prupe.2G169200_v2.0.a1 Prupe.2G169500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G172300_v2.0.a1 Prupe.2G304800_v2.0.a1 Prupe.4G264800_v2.0.a1 Prupe.4G265000_v2.0.a1 Prupe.5G051900_v2.0.a1 Prupe.5G052000_v2.0.a1
pyrus_communis pycom01g08380 pycom01g08430 pycom01g08490 pycom01g08520 pycom01g08540 pycom01g08550 pycom01g08600 pycom01g08630 pycom01g08660 pycom01g08720 pycom01g09180 pycom01g09200 pycom01g09210 pycom01g09270 pycom01g09280 pycom01g09300 pycom01g09380 pycom01g19110 pycom01g22260 pycom01g22310 pycom01g22330 pycom01g22350 pycom01g22360 pycom02g23250 pycom07g13420 pycom07g13670 pycom07g13900 pycom07g13910 pycom07g13960 pycom07g13970 pycom07g25680 pycom11g22830
rosa_chinensis RchiOBHm_Chr0c22g0500431 RchiOBHm_Chr0c22g0500441 RchiOBHm_Chr0c22g0500561 RchiOBHm_Chr0c22g0500571 RchiOBHm_Chr0c22g0500611 RchiOBHm_Chr0c22g0500621 RchiOBHm_Chr0c22g0500631 RchiOBHm_Chr0c22g0500681 RchiOBHm_Chr1g0348221 RchiOBHm_Chr1g0348251 RchiOBHm_Chr1g0352861 RchiOBHm_Chr1g0352871 RchiOBHm_Chr1g0352891 RchiOBHm_Chr1g0352901 RchiOBHm_Chr1g0354671 RchiOBHm_Chr1g0354701 RchiOBHm_Chr1g0354711 RchiOBHm_Chr1g0354751 RchiOBHm_Chr1g0354761 RchiOBHm_Chr1g0354841 RchiOBHm_Chr1g0354851 RchiOBHm_Chr1g0354881 RchiOBHm_Chr1g0354971 RchiOBHm_Chr1g0354981 RchiOBHm_Chr1g0354991 RchiOBHm_Chr1g0355001 RchiOBHm_Chr1g0355011 RchiOBHm_Chr1g0355021 RchiOBHm_Chr1g0355861 RchiOBHm_Chr1g0379671 RchiOBHm_Chr1g0379681 RchiOBHm_Chr2g0096591 RchiOBHm_Chr2g0132821 RchiOBHm_Chr3g0454901 RchiOBHm_Chr3g0472711 RchiOBHm_Chr4g0400791 RchiOBHm_Chr5g0069481 RchiOBHm_Chr5g0069511 RchiOBHm_Chr5g0069551 RchiOBHm_Chr6g0254651 RchiOBHm_Chr6g0259721 RchiOBHm_Chr7g0205911 RchiOBHm_Chr7g0206401 RchiOBHm_Chr7g0206571 RchiOBHm_Chr7g0206581 RchiOBHm_Chr7g0206621 RchiOBHm_Chr7g0206631 RchiOBHm_Chr7g0206641 RchiOBHm_Chr7g0206681 RchiOBHm_Chr7g0206691 RchiOBHm_Chr7g0206751 RchiOBHm_Chr7g0206761 RchiOBHm_Chr7g0206851 RchiOBHm_Chr7g0206911 RchiOBHm_Chr7g0206921 RchiOBHm_Chr7g0207001 RchiOBHm_Chr7g0207011 RchiOBHm_Chr7g0207031 RchiOBHm_Chr7g0207101 RchiOBHm_Chr7g0207161 RchiOBHm_Chr7g0207201 RchiOBHm_Chr7g0207271 RchiOBHm_Chr7g0207301 RchiOBHm_Chr7g0207311 RchiOBHm_Chr7g0207421 RchiOBHm_Chr7g0207481 RchiOBHm_Chr7g0207491 RchiOBHm_Chr7g0207501 RchiOBHm_Chr7g0207521 RchiOBHm_Chr7g0207531 RchiOBHm_Chr7g0207561 RchiOBHm_Chr7g0207571 RchiOBHm_Chr7g0207581 RchiOBHm_Chr7g0207601 RchiOBHm_Chr7g0207621 RchiOBHm_Chr7g0207631 RchiOBHm_Chr7g0207651 RchiOBHm_Chr7g0207661 RchiOBHm_Chr7g0207711 RchiOBHm_Chr7g0207761 RchiOBHm_Chr7g0207801 RchiOBHm_Chr7g0208821 RchiOBHm_Chr7g0208831 RchiOBHm_Chr7g0208841 RchiOBHm_Chr7g0213601 RchiOBHm_Chr7g0215981 RchiOBHm_Chr7g0216021
rosa_laevigata RLG00000003193 RLG00000003194 RLG00000003287 RLG00000003288 RLG00000003289 RLG00000003293 RLG00000003294 RLG00000003295 RLG00000003297 RLG00000003299 RLG00000003301 RLG00000003327 RLG00000003347 RLG00000016653 RLG00000018642 RLG00000018643 RLG00000019285 RLG00000022542 RLG00000026368 RLG00000026371 RLG00000028124 RLG00000028125 RLG00000028183 RLG00000028184 RLG00000028185 RLG00000028188 RLG00000028673 RLG00000029267 RLG00000029325 RLG00000029674 RLG00000032883 RLG00000036055 RLG00000036058 RLG00000036065 RLG00000036068 RLG00000036071 RLG00000036072 RLG00000036075 RLG00000036076
rosa_multiflora Rmu_co8250183.1_g000001 Rmu_co8271981.1_g000001 Rmu_co8410829.1_g000001 Rmu_co8432879.1_g000001 Rmu_co8441941.1_g000001 Rmu_sc0000076.1_g000031 Rmu_sc0000738.1_g000038 Rmu_sc0000848.1_g000003 Rmu_sc0000848.1_g000014 Rmu_sc0000848.1_g000015 Rmu_sc0000848.1_g000016 Rmu_sc0001264.1_g000001 Rmu_sc0002284.1_g000018 Rmu_sc0002356.1_g000011 Rmu_sc0003020.1_g000003 Rmu_sc0003115.1_g000001 Rmu_sc0003115.1_g000002 Rmu_sc0003115.1_g000003 Rmu_sc0003115.1_g000004 Rmu_sc0003115.1_g000005 Rmu_sc0003115.1_g000008 Rmu_sc0003115.1_g000010 Rmu_sc0003115.1_g000011 Rmu_sc0003115.1_g000014 Rmu_sc0003565.1_g000002 Rmu_sc0003652.1_g000013 Rmu_sc0003652.1_g000015 Rmu_sc0003652.1_g000016 Rmu_sc0003652.1_g000019 Rmu_sc0003940.1_g000001 Rmu_sc0003940.1_g000004 Rmu_sc0003940.1_g000009 Rmu_sc0004084.1_g000010 Rmu_sc0004705.1_g000021 Rmu_sc0004972.1_g000007 Rmu_sc0004987.1_g000002 Rmu_sc0004987.1_g000006 Rmu_sc0005065.1_g000018 Rmu_sc0005065.1_g000029 Rmu_sc0005391.1_g000002 Rmu_sc0005633.1_g000003 Rmu_sc0005633.1_g000008 Rmu_sc0006632.1_g000014 Rmu_sc0006632.1_g000018 Rmu_sc0006681.1_g000010 Rmu_sc0006681.1_g000011 Rmu_sc0006733.1_g000003 Rmu_sc0007385.1_g000005 Rmu_sc0007385.1_g000007 Rmu_sc0007385.1_g000009 Rmu_sc0007385.1_g000016 Rmu_sc0007645.1_g000002 Rmu_sc0007645.1_g000003 Rmu_sc0007645.1_g000022 Rmu_sc0007828.1_g000008 Rmu_sc0008509.1_g000003 Rmu_sc0008509.1_g000015 Rmu_sc0008509.1_g000016 Rmu_sc0008509.1_g000020 Rmu_sc0008509.1_g000030 Rmu_sc0008509.1_g000041 Rmu_sc0008756.1_g000001 Rmu_sc0008756.1_g000003 Rmu_sc0013028.1_g000002 Rmu_sc0013028.1_g000003 Rmu_sc0013028.1_g000005 Rmu_sc0013160.1_g000001 Rmu_sc0014454.1_g000009 Rmu_sc0014455.1_g000007 Rmu_sc0014659.1_g000004 Rmu_sc0017798.1_g000002 Rmu_sc0017798.1_g000004 Rmu_sc0029608.1_g000001 Rmu_sc0037861.1_g000001 Rmu_sc0038750.1_g000001 Rmu_sc0042995.1_g000001 Rmu_ssc0000161.1_g000017
rosa_roxburghii Rroxscaffold_1G00009180 Rroxscaffold_1G00009190 Rroxscaffold_1G00011450 Rroxscaffold_1G00011480 Rroxscaffold_2G00111660 Rroxscaffold_2G00113570 Rroxscaffold_2G00122140 Rroxscaffold_3G00243730 Rroxscaffold_3G00245750 Rroxscaffold_3G00245760 Rroxscaffold_3G00250220 Rroxscaffold_3G00251160 Rroxscaffold_3G00251270 Rroxscaffold_3G00251280 Rroxscaffold_3G00251300 Rroxscaffold_3G00251340 Rroxscaffold_3G00251350 Rroxscaffold_3G00251390 Rroxscaffold_3G00251400 Rroxscaffold_3G00251560 Rroxscaffold_3G00251570 Rroxscaffold_3G00251870 Rroxscaffold_3G00252200 Rroxscaffold_3G00252210 Rroxscaffold_4G00279970 Rroxscaffold_4G00299970 Rroxscaffold_4G00300760 Rroxscaffold_4G00300780 Rroxscaffold_4G00300810 Rroxscaffold_4G00300850 Rroxscaffold_4G00307080 Rroxscaffold_4G00307100 Rroxscaffold_4G00313990 Rroxscaffold_6G00405080
rosa_rugosa Rorug01G0193600 Rorug01G0193700 Rorug01G0243800 Rorug01G0244000 Rorug01G0244000 Rorug01G0244400 Rorug01G0414300.1 Rorug01G0414500 Rorug01G0414600 Rorug02G0235600 Rorug02G0307900 Rorug02G0583100 Rorug02G0583200 Rorug02G0583300 Rorug05G0398000 Rorug05G0398100 Rorug05G0398200 Rorug05G0580300 Rorug05G0590300 Rorug06G0116000 Rorug06G0116100 Rorug07G0096800 Rorug07G0097100.1 Rorug07G0097200 Rorug07G0098600 Rorug07G0098600 Rorug07G0098700 Rorug07G0099100 Rorug07G0106100 Rorug07G0106200 Rorug07G0106200 Rorug07G0106300 Rorug07G0157600 Rorug07G0157700 Rorug07G0157700 Rorug07G0157800
rosa_samantha Rh1AG255500 Rh1AG256700 Rh1BG225800 Rh1BG226200 Rh1BG230000 Rh1CG195300 Rh1CG238400 Rh1CG238500 Rh1CG238900 Rh1CG239000 Rh1CG239300 Rh1CG239400 Rh1CG239800 Rh1CG240000 Rh1CG240200 Rh1CG240300 Rh1CG244300 Rh1CG406900 Rh1CG407300 Rh1CG407400 Rh2CG343600 Rh2DG383200 Rh3BG205900 Rh4AG404400 Rh4BG415500 Rh5AG455200 Rh5AG455600 Rh5CG497000 Rh5CG497200 Rh7AG228800 Rh7AG230400 Rh7AG230800 Rh7AG231200 Rh7AG231600 Rh7AG231800 Rh7AG232100 Rh7AG241600 Rh7BG236200 Rh7CG238200 Rh7CG239100 Rh7CG243400 Rh7CG244900
rosa_wichuraiana Rw0G023040 Rw1G017780 Rw1G022320 Rw1G022340 Rw1G022410 Rw1G022420 Rw1G022440 Rw1G022460 Rw1G022490 Rw1G022500 Rw1G022530 Rw1G022550 Rw1G022560 Rw1G022600 Rw1G023060 Rw1G038150 Rw1G038160 Rw2G008210 Rw2G022350 Rw2G029290 Rw4G015050 Rw4G019850 Rw5G024060 Rw5G042460 Rw7G019160 Rw7G019460 Rw7G019690 Rw7G019830 Rw7G019860 Rw7G019880 Rw7G019890 Rw7G019930 Rw7G019990 Rw7G020460 Rw7G025100 Rw7G025120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1293
AarI CACCTGC 1 cut(s) 533
Acc36I ACCTGC 2 cut(s) 57, 533
AccB1I GGYRCC 1 cut(s) 2852
AccB7I CCANNNNNTGG 1 cut(s) 2939
AciI CCGC 5 cut(s) 2496, 2630, 2915, 3075, 3172
AclWI GGATC 1 cut(s) 371
AcoI YGGCCR 2 cut(s) 1160, 2338
AcsI RAATTY 7 cut(s) 647, 794, 941, 1666, 2625, 2769, 2841
AcuI CTGAAG 5 cut(s) 27, 417, 1184, 2724, 2846
AfaI GTAC 2 cut(s) 1614, 2275
AfiI CCNNNNNNNGG 8 cut(s) 410, 578, 725, 872, 1019, 1534, 2863, 2939
AflII CTTAAG 1 cut(s) 3089
AflIII ACRYGT 3 cut(s) 1125, 1806, 2019
AhlI ACTAGT 1 cut(s) 1793
AjnI CCWGG 4 cut(s) 150, 1055, 2932, 3123
Alw21I GWGCWC 1 cut(s) 1766
Alw26I GTCTC 4 cut(s) 1364, 1499, 2064, 3014
AlwI GGATC 1 cut(s) 371
Ama87I CYCGRG 1 cut(s) 1616
AoxI GGCC 6 cut(s) 153, 250, 1160, 1775, 1825, 2338
ApaI GGGCCC 1 cut(s) 1829
ApeKI GCWGC 1 cut(s) 303
ApoI RAATTY 7 cut(s) 647, 794, 941, 1666, 2625, 2769, 2841
ArsI GACNNNNNNTTYG 2 cut(s) 2494, 2526
AseI ATTAAT 2 cut(s) 1254, 1652
Asp700I GAANNNNTTC 1 cut(s) 1068
AsuHPI GGTGA 3 cut(s) 91, 425, 2371
AvaI CYCGRG 1 cut(s) 1616
AvaII GGWCC 9 cut(s) 460, 560, 707, 854, 1001, 1382, 2376, 2440, 2909
BaeGI GKGCMC 1 cut(s) 1829
BalI TGGCCA 2 cut(s) 1162, 2340
BanI GGYRCC 1 cut(s) 2852
BanII GRGCYC 2 cut(s) 1766, 1829
BbsI GAAGAC 5 cut(s) 1390, 1909, 1941, 2031, 2712
Bbv12I GWGCWC 1 cut(s) 1766
BbvI GCAGC 1 cut(s) 290
BccI CCATC 7 cut(s) 1394, 1984, 2854, 2933, 2951, 2999, 3061
BceAI ACGGC 1 cut(s) 2017
BcgI CGANNNNNNTGC 2 cut(s) 1912, 1946
BciT130I CCWGG 4 cut(s) 152, 1057, 2934, 3125
BcoDI GTCTC 4 cut(s) 1364, 1499, 2064, 3014
BcuI ACTAGT 1 cut(s) 1793
BfaI CTAG 6 cut(s) 1136, 1418, 1638, 1794, 2420, 2676
BfmI CTRYAG 2 cut(s) 19, 2204
BfrI CTTAAG 1 cut(s) 3089
BfuAI ACCTGC 2 cut(s) 57, 533
BisI GCNGC 2 cut(s) 304, 3076
BlsI GCNGC 2 cut(s) 305, 3077
Bme1390I CCNGG 4 cut(s) 152, 1057, 2934, 3125
Bme18I GGWCC 9 cut(s) 460, 560, 707, 854, 1001, 1382, 2376, 2440, 2909
BmeT110I CYCGRG 1 cut(s) 1616
BmiI GGNNCC 3 cut(s) 1384, 1827, 2854
BmrFI CCNGG 4 cut(s) 152, 1057, 2934, 3125
BmsI GCATC 2 cut(s) 682, 2115
BpiI GAAGAC 5 cut(s) 1390, 1909, 1941, 2031, 2712
Bpu10I CCTNAGC 1 cut(s) 1760
BpuEI CTTGAG 3 cut(s) 1106, 1132, 1523
BsaBI GATNNNNATC 2 cut(s) 381, 1230
BsaI GGTCTC 3 cut(s) 1364, 1499, 3014
BsaJI CCNNGG 4 cut(s) 1509, 2296, 3019, 3159
BsaWI WCCGGW 2 cut(s) 2373, 2754
BsaXI ACNNNNNCTCC 2 cut(s) 2044, 2074
Bsc4I CCNNNNNNNGG 8 cut(s) 410, 578, 725, 872, 1019, 1534, 2863, 2939
Bse1I ACTGG 3 cut(s) 351, 2980, 3061
Bse3DI GCAATG 2 cut(s) 13, 2476
Bse8I GATNNNNATC 2 cut(s) 381, 1230
BseBI CCWGG 4 cut(s) 152, 1057, 2934, 3125
BseDI CCNNGG 4 cut(s) 1509, 2296, 3019, 3159
BseGI GGATG 4 cut(s) 265, 1386, 2130, 3072
BseJI GATNNNNATC 2 cut(s) 381, 1230
BseLI CCNNNNNNNGG 8 cut(s) 410, 578, 725, 872, 1019, 1534, 2863, 2939
BseMI GCAATG 2 cut(s) 13, 2476
BseMII CTCAG 8 cut(s) 478, 653, 800, 947, 1482, 1751, 1860, 2019
BseNI ACTGG 3 cut(s) 351, 2980, 3061
BseSI GKGCMC 1 cut(s) 1829
BseXI GCAGC 1 cut(s) 290
BseYI CCCAGC 2 cut(s) 1828, 3043
BsgI GTGCAG 2 cut(s) 1989, 3057
BshFI GGCC 6 cut(s) 155, 252, 1162, 1777, 1827, 2340
BshNI GGYRCC 1 cut(s) 2852
BsiHKAI GWGCWC 1 cut(s) 1766
BsiHKCI CYCGRG 1 cut(s) 1616
BsiSI CCGG 2 cut(s) 2374, 2755
BslFI GGGAC 1 cut(s) 1368
BslI CCNNNNNNNGG 8 cut(s) 410, 578, 725, 872, 1019, 1534, 2863, 2939
BsmAI GTCTC 4 cut(s) 1364, 1499, 2064, 3014
BsmFI GGGAC 1 cut(s) 1368
BsmI GAATGC 1 cut(s) 329
BsnI GGCC 6 cut(s) 155, 252, 1162, 1777, 1827, 2340
Bso31I GGTCTC 3 cut(s) 1364, 1499, 3014
BsoBI CYCGRG 1 cut(s) 1616
Bsp120I GGGCCC 1 cut(s) 1825
Bsp1286I GDGCHC 2 cut(s) 1766, 1829
Bsp143I GATC 7 cut(s) 376, 607, 754, 901, 1048, 1238, 1428
BspACI CCGC 5 cut(s) 2496, 2630, 2915, 3075, 3172
BspANI GGCC 6 cut(s) 155, 252, 1162, 1777, 1827, 2340
BspCNI CTCAG 8 cut(s) 477, 654, 801, 948, 1483, 1752, 1861, 2020
BspLI GGNNCC 3 cut(s) 1384, 1827, 2854
BspMI ACCTGC 2 cut(s) 57, 533
BspPI GGATC 1 cut(s) 371
BspQI GCTCTTC 1 cut(s) 237
BspT107I GGYRCC 1 cut(s) 2852
BspTI CTTAAG 1 cut(s) 3089
BspTNI GGTCTC 3 cut(s) 1364, 1499, 3014
BsrDI GCAATG 2 cut(s) 13, 2476
BsrI ACTGG 3 cut(s) 351, 2980, 3061
BssECI CCNNGG 4 cut(s) 1509, 2296, 3019, 3159
BssMI GATC 7 cut(s) 376, 607, 754, 901, 1048, 1238, 1428
BssT1I CCWWGG 4 cut(s) 1509, 2296, 3019, 3159
Bst2UI CCWGG 4 cut(s) 152, 1057, 2934, 3125
Bst4CI ACNGT 2 cut(s) 2273, 2947
Bst6I CTCTTC 3 cut(s) 237, 1275, 1369
BstAFI CTTAAG 1 cut(s) 3089
BstC8I GCNNGC 6 cut(s) 228, 1178, 1409, 1931, 2471, 2788
BstF5I GGATG 4 cut(s) 265, 1386, 2130, 3072
BstKTI GATC 7 cut(s) 379, 610, 757, 904, 1051, 1241, 1431
BstMAI GTCTC 4 cut(s) 1364, 1499, 2064, 3014
BstMBI GATC 7 cut(s) 376, 607, 754, 901, 1048, 1238, 1428
BstMWI GCNNNNNNNGC 3 cut(s) 1824, 2196, 3178
BstNI CCWGG 4 cut(s) 152, 1057, 2934, 3125
BstNSI RCATGY 5 cut(s) 230, 1129, 1411, 1810, 2023
BstSCI CCNGG 4 cut(s) 150, 1055, 2932, 3123
BstSFI CTRYAG 2 cut(s) 19, 2204
BstSLI GKGCMC 1 cut(s) 1829
BstV1I GCAGC 1 cut(s) 290
BstV2I GAAGAC 5 cut(s) 1390, 1909, 1941, 2031, 2712
BsuRI GGCC 6 cut(s) 155, 252, 1162, 1777, 1827, 2340
BtsCI GGATG 4 cut(s) 265, 1386, 2130, 3072
BtsI GCAGTG 2 cut(s) 1977, 3045
BtsIMutI CAGTG 7 cut(s) 562, 709, 856, 1003, 1977, 3045, 3054
BveI ACCTGC 2 cut(s) 57, 533
Cac8I GCNNGC 6 cut(s) 228, 1178, 1409, 1931, 2471, 2788
CseI GACGC 1 cut(s) 3187
Csp6I GTAC 2 cut(s) 1613, 2274
CviQI GTAC 2 cut(s) 1613, 2274
DpnI GATC 7 cut(s) 378, 609, 756, 903, 1050, 1240, 1430
DpnII GATC 7 cut(s) 376, 607, 754, 901, 1048, 1238, 1428
EaeI YGGCCR 2 cut(s) 1160, 2338
Eam1104I CTCTTC 3 cut(s) 237, 1275, 1369
EarI CTCTTC 3 cut(s) 237, 1275, 1369
Ecl136II GAGCTC 1 cut(s) 1764
Eco130I CCWWGG 4 cut(s) 1509, 2296, 3019, 3159
Eco147I AGGCCT 1 cut(s) 252
Eco24I GRGCYC 2 cut(s) 1766, 1829
Eco31I GGTCTC 3 cut(s) 1364, 1499, 3014
Eco32I GATATC 2 cut(s) 446, 2760
Eco47I GGWCC 9 cut(s) 460, 560, 707, 854, 1001, 1382, 2376, 2440, 2909
Eco53kI GAGCTC 1 cut(s) 1764
Eco57I CTGAAG 5 cut(s) 27, 417, 1184, 2724, 2846
Eco88I CYCGRG 1 cut(s) 1616
EcoICRI GAGCTC 1 cut(s) 1764
EcoO109I RGGNCCY 1 cut(s) 1382
EcoRI GAATTC 2 cut(s) 1666, 2841
EcoRII CCWGG 4 cut(s) 150, 1055, 2932, 3123
EcoRV GATATC 2 cut(s) 446, 2760
EcoT14I CCWWGG 4 cut(s) 1509, 2296, 3019, 3159
EcoT22I ATGCAT 1 cut(s) 126
EcoT38I GRGCYC 2 cut(s) 1766, 1829
ErhI CCWWGG 4 cut(s) 1509, 2296, 3019, 3159
FaqI GGGAC 1 cut(s) 1368
Fnu4HI GCNGC 2 cut(s) 304, 3076
FokI GGATG 4 cut(s) 272, 1373, 2137, 3079
FriOI GRGCYC 2 cut(s) 1766, 1829
Fsp4HI GCNGC 2 cut(s) 304, 3076
FspBI CTAG 6 cut(s) 1136, 1418, 1638, 1794, 2420, 2676
GluI GCNGC 2 cut(s) 304, 3076
GsaI CCCAGC 2 cut(s) 1832, 3047
HaeIII GGCC 6 cut(s) 155, 252, 1162, 1777, 1827, 2340
HapII CCGG 2 cut(s) 2374, 2755
HgaI GACGC 1 cut(s) 3187
HincII GTYRAC 3 cut(s) 1942, 2080, 2293
HindII GTYRAC 3 cut(s) 1942, 2080, 2293
HindIII AAGCTT 2 cut(s) 1927, 2696
HpaI GTTAAC 1 cut(s) 1942
HpaII CCGG 2 cut(s) 2374, 2755
HphI GGTGA 3 cut(s) 91, 425, 2371
Hpy99I CGWCG 1 cut(s) 1664
HpyCH4III ACNGT 2 cut(s) 2273, 2947
HpyCH4IV ACGT 1 cut(s) 1558
HpyF10VI GCNNNNNNNGC 3 cut(s) 1824, 2196, 3178
HpySE526I ACGT 1 cut(s) 1558
KspAI GTTAAC 1 cut(s) 1942
Kzo9I GATC 7 cut(s) 376, 607, 754, 901, 1048, 1238, 1428
LguI GCTCTTC 1 cut(s) 237
LmnI GCTCC 2 cut(s) 197, 2107
Lsp1109I GCAGC 1 cut(s) 290
LweI GCATC 2 cut(s) 682, 2115
MaeI CTAG 6 cut(s) 1136, 1418, 1638, 1794, 2420, 2676
MaeII ACGT 1 cut(s) 1558
MaeIII GTNAC 6 cut(s) 346, 1214, 1554, 1569, 2714, 3052
MalI GATC 7 cut(s) 378, 609, 756, 903, 1050, 1240, 1430
MboI GATC 7 cut(s) 376, 607, 754, 901, 1048, 1238, 1428
MfeI CAATTG 4 cut(s) 668, 815, 962, 1445
MhlI GDGCHC 2 cut(s) 1766, 1829
MlsI TGGCCA 2 cut(s) 1162, 2340
MluNI TGGCCA 2 cut(s) 1162, 2340
MlyI GAGTC 8 cut(s) 257, 526, 673, 820, 967, 1430, 1460, 1738
MmeI TCCRAC 5 cut(s) 166, 219, 1392, 2102, 2709
Mox20I TGGCCA 2 cut(s) 1162, 2340
Mph1103I ATGCAT 1 cut(s) 126
MroXI GAANNNNTTC 1 cut(s) 1068
MscI TGGCCA 2 cut(s) 1162, 2340
MslI CAYNNNNRTG 4 cut(s) 89, 104, 1406, 2723
Msp20I TGGCCA 2 cut(s) 1162, 2340
MspA1I CMGCKG 1 cut(s) 2917
MspCI CTTAAG 1 cut(s) 3089
MspI CCGG 2 cut(s) 2374, 2755
MspR9I CCNGG 4 cut(s) 152, 1057, 2934, 3125
MunI CAATTG 4 cut(s) 668, 815, 962, 1445
Mva1269I GAATGC 1 cut(s) 329
MvaI CCWGG 4 cut(s) 152, 1057, 2934, 3125
MwoI GCNNNNNNNGC 3 cut(s) 1824, 2196, 3178
NdeII GATC 7 cut(s) 376, 607, 754, 901, 1048, 1238, 1428
NlaIV GGNNCC 3 cut(s) 1384, 1827, 2854
NmuCI GTSAC 2 cut(s) 1554, 3052
NsiI ATGCAT 1 cut(s) 126
NspI RCATGY 5 cut(s) 230, 1129, 1411, 1810, 2023
PaeI GCATGC 2 cut(s) 230, 1411
PaqCI CACCTGC 1 cut(s) 533
PceI AGGCCT 1 cut(s) 252
PciI ACATGT 3 cut(s) 1125, 1806, 2019
PciSI GCTCTTC 1 cut(s) 237
PctI GAATGC 1 cut(s) 329
PdmI GAANNNNTTC 1 cut(s) 1068
PflMI CCANNNNNTGG 1 cut(s) 2939
PfoI TCCNGGA 3 cut(s) 1055, 2932, 3123
PkrI GCNGC 2 cut(s) 305, 3077
PleI GAGTC 8 cut(s) 257, 525, 672, 819, 966, 1429, 1460, 1737
PpsI GAGTC 8 cut(s) 257, 525, 672, 819, 966, 1429, 1460, 1737
PpuMI RGGWCCY 1 cut(s) 1382
PscI ACATGT 3 cut(s) 1125, 1806, 2019
PshBI ATTAAT 2 cut(s) 1254, 1652
PsiI TTATAA 1 cut(s) 1293
Psp124BI GAGCTC 1 cut(s) 1766
Psp5II RGGWCCY 1 cut(s) 1382
Psp6I CCWGG 4 cut(s) 150, 1055, 2932, 3123
PspFI CCCAGC 2 cut(s) 1828, 3043
PspGI CCWGG 4 cut(s) 150, 1055, 2932, 3123
PspN4I GGNNCC 3 cut(s) 1384, 1827, 2854
PspOMI GGGCCC 1 cut(s) 1825
PspPPI RGGWCCY 1 cut(s) 1382
RsaI GTAC 2 cut(s) 1614, 2275
RsaNI GTAC 2 cut(s) 1613, 2274
RseI CAYNNNNRTG 4 cut(s) 89, 104, 1406, 2723
SacI GAGCTC 1 cut(s) 1766
SapI GCTCTTC 1 cut(s) 237
SatI GCNGC 2 cut(s) 304, 3076
Sau3AI GATC 7 cut(s) 376, 607, 754, 901, 1048, 1238, 1428
SchI GAGTC 8 cut(s) 257, 526, 673, 820, 967, 1430, 1460, 1738
ScrFI CCNGG 4 cut(s) 152, 1057, 2934, 3125
SduI GDGCHC 2 cut(s) 1766, 1829
SfaNI GCATC 2 cut(s) 682, 2115
SfcI CTRYAG 2 cut(s) 19, 2204
SinI GGWCC 9 cut(s) 460, 560, 707, 854, 1001, 1382, 2376, 2440, 2909
SmiMI CAYNNNNRTG 4 cut(s) 89, 104, 1406, 2723
SmlI CTYRAG 4 cut(s) 1085, 1111, 1502, 3089
SmoI CTYRAG 4 cut(s) 1085, 1111, 1502, 3089
SpeI ACTAGT 1 cut(s) 1793
SphI GCATGC 2 cut(s) 230, 1411
SseBI AGGCCT 1 cut(s) 252
SsiI CCGC 5 cut(s) 2496, 2630, 2915, 3075, 3172
SspI AATATT 2 cut(s) 1314, 2458
SspMI CTAG 6 cut(s) 1136, 1418, 1638, 1794, 2420, 2676
SstI GAGCTC 1 cut(s) 1766
StuI AGGCCT 1 cut(s) 252
StyD4I CCNGG 4 cut(s) 150, 1055, 2932, 3123
StyI CCWWGG 4 cut(s) 1509, 2296, 3019, 3159
TaaI ACNGT 2 cut(s) 2273, 2947
TaiI ACGT 1 cut(s) 1561
TaqI TCGA 4 cut(s) 1047, 1659, 1922, 2012
TauI GCSGC 1 cut(s) 3078
TscAI CASTG 7 cut(s) 562, 709, 856, 1003, 1977, 3045, 3061
TseFI GTSAC 2 cut(s) 1554, 3052
TseI GCWGC 1 cut(s) 303
Tsp45I GTSAC 2 cut(s) 1554, 3052
TspDTI ATGAA 9 cut(s) 17, 73, 493, 640, 787, 934, 1061, 2420, 2735
TspGWI ACGGA 1 cut(s) 2012
TspRI CASTG 7 cut(s) 562, 709, 856, 1003, 1977, 3045, 3061
Van91I CCANNNNNTGG 1 cut(s) 2939
Vha464I CTTAAG 1 cut(s) 3089
VpaK11BI GGWCC 9 cut(s) 460, 560, 707, 854, 1001, 1382, 2376, 2440, 2909
VspI ATTAAT 2 cut(s) 1254, 1652
XapI RAATTY 7 cut(s) 647, 794, 941, 1666, 2625, 2769, 2841
XbaI TCTAGA 3 cut(s) 1135, 1417, 2675
XceI RCATGY 5 cut(s) 230, 1129, 1411, 1810, 2023
XcmI CCANNNNNNNNNTGG 2 cut(s) 2284, 2434
XmnI GAANNNNTTC 1 cut(s) 1068
XspI CTAG 6 cut(s) 1136, 1418, 1638, 1794, 2420, 2676
Zsp2I ATGCAT 1 cut(s) 126
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.