Rw7G019890

Leucine Rich repeat

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
Physical Location & Seq
Reverse (-)
22186324 .. 22189038
2715 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G019890.1

Sequence Viewer

Length: 2715 bp
ATGAGTGGTAGATCTGTGCATTCTGTTTTGGTTGGGCTTGTGTGCCTGGCCCTTGCCTCTGCTATTTGTTGTTCAAGTGTTGGAAGCTCCAACAACATTATGTGCTTGGAGAGTGAAAGGCATGCTCTTCTCCAGTTCAAACAAGGCCTTGTGGATGACTCCAATGCTCTTGCTTCTTGGAAAAGTGAGAGAGATTGCTGCAAGTGGAGAGGAATAGCATGCAACAACCAAACAGGTCATGTCATCACTCTAGATCTCTCTTATAGTTATGATGCTAATCTCGATTCCACTGAATTGAGAGGTGAAATTAGTCATTCACTACTTGAATTGCCATATCTAAATTACTTGGACCTCAGTTATAATGATTTTGGAGGAATGATCATTCCCAAGTTCATTGGCTCTTTGAGTCAATTGAAAGAACTCAAACTTGCACATGCTAATTTCAGTGGACCTGTTCCTCCCCAACTTGGAAACCTCTCTAATTTGCACACTCTTGATCTTTCCAGGAACACATTTGTTAGTTTTGAGAATATTGAGTGGTTATCTCATCTTTCTTCCTTGAGATACCTGAACATGTCACATCTAGATTTGTTTGAGGCTGTGAATTGGCCACAATCTTTAAGCAAGCTCACTTCACTTACAGAGCTCAGGTTATCTTGGTGTAATCTTCCTGATGTCAATCTAAGATCGCTTTCCTTTATTAATTCTTCCACCTCTCTTCAACTCCTTGACCTCTCTAGGAACTCTCTTAATTCTTCAATATTTTATTGGATAGCCAATGTCAGCAGCAACTTTATCCATATTGATCTCTCTTCCAATCAACTTGAAGGTGGGATACCAAAAGGCTTTCAAAACTTATGCAGCTTAGAGTTGTTGTACTTGGGTGCAAACAAATTGTCTGAAAACATTGAGGACTCTGTTAAAACCTTGACTTGTGCTGAGAACACACTTGACACCTTGGACTTGGGTTTTAACCAATTTTGGGGATCGTTGCCAGATTTCACACGTTTCTCAAATTTAAGAAAGTTGATTCTTCTGAGGAATCAACTAAATGGGTCTGTACCCGAGAGTGTCGGGCAACTCTCTAGCCTTGAACATCTATATCTCTCCTGGAATTCTTTCACTGGTGTCATAACAGAATCCCACTTTCTAAACCTCTCTCGTTTACAGGCTTTGCTTCTTTCTAGTAATTGTTTCTCTATCAACCTGAGCTCAGATTGGAATCCACCATTTCAACTTACTTATTTACACATGTCCTTCCATAAGCTGGGCCCAGCTATTCCCAAATGGATTCTAAGGCAAACAAATCTTCGAGTTCTTTTTCTCTCTAATGCTAGTCTATCAGGATCATTACCTAATAAGTTTTGGGATCTATTTTCTGGCTTGGATTACTTAGATCTCTCTATGAACCAAATCCATGGGAAACTACCGAATCTGTCATCGATAAGCTTAGGTCATGTTAACTTGTCTTCTAATCTATTTTCTGGCGCATTGCCAACATTTTCTCCCATTCTCATTCGGTTGTATCTCTCAAATAATAGCTTTTCAGGACCCTTGTCTTCCTTATGTGCAATGCAGGCTCCAAATTTGGAGTATCTTGACCTTTCTAAGAACCTATTGTCTGGGGAGCTTCCTAATTGTTGGATGCAATTTCAAGAATTGGAAATGTTGAATTTGGGAAAGAATAAATTATCTGGAAAAATACCAAGCTCGTTAGGCAATCTACAGGGAATTGCGATATTGCGTTTACATGACAACAACTTTTCAGGAGAATTGCCTTCTTTAGAGAACTGTACCAGATTATTGATGGTTGACCTTGGCAACAATAACCTGTCGGGAAAGATACCACCATGGATTGGCCAAAACCTAACAAACTTGGTGATTCTAGGCTTACGGTCAAATGAGTTTAATGGAATCATACCCTTCTCCCTGTGCAATCTAGCTGCCATTCATGTTTTGGACCTTTCTCACAACAATATTTCAGGAGGCTTGCCACATTGCTTCAATAACATAACCTCGTTGGCTAATGATACTACAGCTTCTGATTTTATTGTGGAACTTGTGTGGAAAGGAATAGAAATTGAGTTTGGGGAAAATCTTGACCTTATGAGAAGCATTGACATTTCAAGCAACTATTTGATTGGGGAAATTCCGCCAAGTATAGCAAGTATGACAGAGTTGATTTCTCTGAACCTGTCTACAAACAAATTGACGGGAAAGCTTCCTGAAGACTTTGGTAACATGAAGATGTTGGAATCTCTTGATTTGTCAAGAAACCGGATATCTGGTAAAATTCCTACAAGTTTGGCGAGCTTAAACTTTCTTAGTGTCTTGGACTTATCACACAACAACTTGTCAGGAAGAATTCCATTAGGCACCCAACTTCAGGGTTTTAATGCTTCTCAATATATGGGAAATCTTGGACTTTGTGGACCACCGCTGACACAAAGTTGTCCAGGAGATGGAACAGTTCAAGATGATGGAATCGCCAGAGGAACTGAAATTCATAACAAAGAGCAGGTTGATGATGGTCTCATAAGCCTAGGATTCTTTATCAGTGCATTGCTGGGATTCGTCACTGGATTTTGGATAGTCTGCGTCAGTTTACTGCTTAAGACTTCTTGGAGATATGCTTATTTCAGATTCCTGGACAATGCAAAAGATTGGATATATGTCAAAAGCAAGGCAAAAGTGCGGAGGACACTTCAAAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

904

Amino Acids

100.07

Weight (kDa)

5.85

Isoelectric Point (pI)

39.14

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 37 - 75 3.9e-13 Leucine rich repeat N-terminal domain
LRR_14 PF23598 101 - 299 4.5e-09 Leucine-rich repeat region
LRR_14 PF23598 699 - 783 9.5e-06 Leucine-rich repeat region
LRR_8 PF13855 704 - 761 1.6e-09 Leucine rich repeat
LRR_8 PF13855 745 - 785 3.3e-06 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000028)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g45420 FvH4_4g14031 FvH4_5g20780 FvH4_6g28530 FvH4_7g14020 FvH4_7g14030 FvH4_7g14040 FvH4_7g14050 FvH4_7g14060 FvH4_7g14070 FvH4_7g14090 FvH4_7g14110 FvH4_7g14140 FvH4_7g14450
malus_domestica MD00G1189100.v1.1 MD01G1018600.v1.1 MD01G1053800.v1.1 MD01G1053900.v1.1 MD01G1054000.v1.1 MD01G1054100.v1.1 MD01G1056700.v1.1 MD01G1057000.v1.1 MD01G1057300.v1.1 MD01G1057400.v1.1 MD01G1061600.v1.1 MD01G1061800.v1.1 MD01G1061900.v1.1 MD01G1062000.v1.1 MD01G1062400.v1.1 MD01G1062500.v1.1 MD01G1063200.v1.1 MD01G1063300.v1.1 MD01G1063400.v1.1 MD01G1063700.v1.1 MD01G1063900.v1.1 MD01G1064200.v1.1 MD01G1064300.v1.1 MD01G1064400.v1.1 MD01G1064600.v1.1 MD01G1064700.v1.1 MD01G1181100.v1.1 MD01G1212300.v1.1 MD01G1212500.v1.1 MD01G1212600.v1.1 MD02G1271900.v1.1 MD07G1136500.v1.1 MD07G1139300.v1.1 MD07G1141200.v1.1 MD07G1144700.v1.1 MD08G1144200.v1.1 MD14G1186300.v1.1 MD14G1186500.v1.1 MD14G1186700.v1.1 MD14G1186800.v1.1 MD15G1351300.v1.1 MD15G1439500.v1.1
prunus_persica Prupe.1G067000_v2.0.a1 Prupe.2G077400_v2.0.a1 Prupe.2G077700_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078600_v2.0.a1 Prupe.2G078800_v2.0.a1 Prupe.2G099600_v2.0.a1 Prupe.2G099700_v2.0.a1 Prupe.2G155100_v2.0.a1 Prupe.2G155500_v2.0.a1 Prupe.2G155600_v2.0.a1 Prupe.2G155800_v2.0.a1 Prupe.2G155900_v2.0.a1 Prupe.2G156100_v2.0.a1 Prupe.2G166100_v2.0.a1 Prupe.2G166300_v2.0.a1 Prupe.2G167500_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G168400_v2.0.a1 Prupe.2G168700_v2.0.a1 Prupe.2G168800_v2.0.a1 Prupe.2G169000_v2.0.a1 Prupe.2G169100_v2.0.a1 Prupe.2G169200_v2.0.a1 Prupe.2G169500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G172300_v2.0.a1 Prupe.2G304800_v2.0.a1 Prupe.4G264800_v2.0.a1 Prupe.4G265000_v2.0.a1 Prupe.5G051900_v2.0.a1 Prupe.5G052000_v2.0.a1
pyrus_communis pycom01g08380 pycom01g08430 pycom01g08490 pycom01g08520 pycom01g08540 pycom01g08550 pycom01g08600 pycom01g08630 pycom01g08660 pycom01g08720 pycom01g09180 pycom01g09200 pycom01g09210 pycom01g09270 pycom01g09280 pycom01g09300 pycom01g09380 pycom01g19110 pycom01g22260 pycom01g22310 pycom01g22330 pycom01g22350 pycom01g22360 pycom02g23250 pycom07g13420 pycom07g13670 pycom07g13900 pycom07g13910 pycom07g13960 pycom07g13970 pycom07g25680 pycom11g22830
rosa_chinensis RchiOBHm_Chr0c22g0500431 RchiOBHm_Chr0c22g0500441 RchiOBHm_Chr0c22g0500561 RchiOBHm_Chr0c22g0500571 RchiOBHm_Chr0c22g0500611 RchiOBHm_Chr0c22g0500621 RchiOBHm_Chr0c22g0500631 RchiOBHm_Chr0c22g0500681 RchiOBHm_Chr1g0348221 RchiOBHm_Chr1g0348251 RchiOBHm_Chr1g0352861 RchiOBHm_Chr1g0352871 RchiOBHm_Chr1g0352891 RchiOBHm_Chr1g0352901 RchiOBHm_Chr1g0354671 RchiOBHm_Chr1g0354701 RchiOBHm_Chr1g0354711 RchiOBHm_Chr1g0354751 RchiOBHm_Chr1g0354761 RchiOBHm_Chr1g0354841 RchiOBHm_Chr1g0354851 RchiOBHm_Chr1g0354881 RchiOBHm_Chr1g0354971 RchiOBHm_Chr1g0354981 RchiOBHm_Chr1g0354991 RchiOBHm_Chr1g0355001 RchiOBHm_Chr1g0355011 RchiOBHm_Chr1g0355021 RchiOBHm_Chr1g0355861 RchiOBHm_Chr1g0379671 RchiOBHm_Chr1g0379681 RchiOBHm_Chr2g0096591 RchiOBHm_Chr2g0132821 RchiOBHm_Chr3g0454901 RchiOBHm_Chr3g0472711 RchiOBHm_Chr4g0400791 RchiOBHm_Chr5g0069481 RchiOBHm_Chr5g0069511 RchiOBHm_Chr5g0069551 RchiOBHm_Chr6g0254651 RchiOBHm_Chr6g0259721 RchiOBHm_Chr7g0205911 RchiOBHm_Chr7g0206401 RchiOBHm_Chr7g0206571 RchiOBHm_Chr7g0206581 RchiOBHm_Chr7g0206621 RchiOBHm_Chr7g0206631 RchiOBHm_Chr7g0206641 RchiOBHm_Chr7g0206681 RchiOBHm_Chr7g0206691 RchiOBHm_Chr7g0206751 RchiOBHm_Chr7g0206761 RchiOBHm_Chr7g0206851 RchiOBHm_Chr7g0206911 RchiOBHm_Chr7g0206921 RchiOBHm_Chr7g0207001 RchiOBHm_Chr7g0207011 RchiOBHm_Chr7g0207031 RchiOBHm_Chr7g0207101 RchiOBHm_Chr7g0207161 RchiOBHm_Chr7g0207201 RchiOBHm_Chr7g0207271 RchiOBHm_Chr7g0207301 RchiOBHm_Chr7g0207311 RchiOBHm_Chr7g0207421 RchiOBHm_Chr7g0207481 RchiOBHm_Chr7g0207491 RchiOBHm_Chr7g0207501 RchiOBHm_Chr7g0207521 RchiOBHm_Chr7g0207531 RchiOBHm_Chr7g0207561 RchiOBHm_Chr7g0207571 RchiOBHm_Chr7g0207581 RchiOBHm_Chr7g0207601 RchiOBHm_Chr7g0207621 RchiOBHm_Chr7g0207631 RchiOBHm_Chr7g0207651 RchiOBHm_Chr7g0207661 RchiOBHm_Chr7g0207711 RchiOBHm_Chr7g0207761 RchiOBHm_Chr7g0207801 RchiOBHm_Chr7g0208821 RchiOBHm_Chr7g0208831 RchiOBHm_Chr7g0208841 RchiOBHm_Chr7g0213601 RchiOBHm_Chr7g0215981 RchiOBHm_Chr7g0216021
rosa_laevigata RLG00000003193 RLG00000003194 RLG00000003287 RLG00000003288 RLG00000003289 RLG00000003293 RLG00000003294 RLG00000003295 RLG00000003297 RLG00000003299 RLG00000003301 RLG00000003327 RLG00000003347 RLG00000016653 RLG00000018642 RLG00000018643 RLG00000019285 RLG00000022542 RLG00000026368 RLG00000026371 RLG00000028124 RLG00000028125 RLG00000028183 RLG00000028184 RLG00000028185 RLG00000028188 RLG00000028673 RLG00000029267 RLG00000029325 RLG00000029674 RLG00000032883 RLG00000036055 RLG00000036058 RLG00000036065 RLG00000036068 RLG00000036071 RLG00000036072 RLG00000036075 RLG00000036076
rosa_multiflora Rmu_co8250183.1_g000001 Rmu_co8271981.1_g000001 Rmu_co8410829.1_g000001 Rmu_co8432879.1_g000001 Rmu_co8441941.1_g000001 Rmu_sc0000076.1_g000031 Rmu_sc0000738.1_g000038 Rmu_sc0000848.1_g000003 Rmu_sc0000848.1_g000014 Rmu_sc0000848.1_g000015 Rmu_sc0000848.1_g000016 Rmu_sc0001264.1_g000001 Rmu_sc0002284.1_g000018 Rmu_sc0002356.1_g000011 Rmu_sc0003020.1_g000003 Rmu_sc0003115.1_g000001 Rmu_sc0003115.1_g000002 Rmu_sc0003115.1_g000003 Rmu_sc0003115.1_g000004 Rmu_sc0003115.1_g000005 Rmu_sc0003115.1_g000008 Rmu_sc0003115.1_g000010 Rmu_sc0003115.1_g000011 Rmu_sc0003115.1_g000014 Rmu_sc0003565.1_g000002 Rmu_sc0003652.1_g000013 Rmu_sc0003652.1_g000015 Rmu_sc0003652.1_g000016 Rmu_sc0003652.1_g000019 Rmu_sc0003940.1_g000001 Rmu_sc0003940.1_g000004 Rmu_sc0003940.1_g000009 Rmu_sc0004084.1_g000010 Rmu_sc0004705.1_g000021 Rmu_sc0004972.1_g000007 Rmu_sc0004987.1_g000002 Rmu_sc0004987.1_g000006 Rmu_sc0005065.1_g000018 Rmu_sc0005065.1_g000029 Rmu_sc0005391.1_g000002 Rmu_sc0005633.1_g000003 Rmu_sc0005633.1_g000008 Rmu_sc0006632.1_g000014 Rmu_sc0006632.1_g000018 Rmu_sc0006681.1_g000010 Rmu_sc0006681.1_g000011 Rmu_sc0006733.1_g000003 Rmu_sc0007385.1_g000005 Rmu_sc0007385.1_g000007 Rmu_sc0007385.1_g000009 Rmu_sc0007385.1_g000016 Rmu_sc0007645.1_g000002 Rmu_sc0007645.1_g000003 Rmu_sc0007645.1_g000022 Rmu_sc0007828.1_g000008 Rmu_sc0008509.1_g000003 Rmu_sc0008509.1_g000015 Rmu_sc0008509.1_g000016 Rmu_sc0008509.1_g000020 Rmu_sc0008509.1_g000030 Rmu_sc0008509.1_g000041 Rmu_sc0008756.1_g000001 Rmu_sc0008756.1_g000003 Rmu_sc0013028.1_g000002 Rmu_sc0013028.1_g000003 Rmu_sc0013028.1_g000005 Rmu_sc0013160.1_g000001 Rmu_sc0014454.1_g000009 Rmu_sc0014455.1_g000007 Rmu_sc0014659.1_g000004 Rmu_sc0017798.1_g000002 Rmu_sc0017798.1_g000004 Rmu_sc0029608.1_g000001 Rmu_sc0037861.1_g000001 Rmu_sc0038750.1_g000001 Rmu_sc0042995.1_g000001 Rmu_ssc0000161.1_g000017
rosa_roxburghii Rroxscaffold_1G00009180 Rroxscaffold_1G00009190 Rroxscaffold_1G00011450 Rroxscaffold_1G00011480 Rroxscaffold_2G00111660 Rroxscaffold_2G00113570 Rroxscaffold_2G00122140 Rroxscaffold_3G00243730 Rroxscaffold_3G00245750 Rroxscaffold_3G00245760 Rroxscaffold_3G00250220 Rroxscaffold_3G00251160 Rroxscaffold_3G00251270 Rroxscaffold_3G00251280 Rroxscaffold_3G00251300 Rroxscaffold_3G00251340 Rroxscaffold_3G00251350 Rroxscaffold_3G00251390 Rroxscaffold_3G00251400 Rroxscaffold_3G00251560 Rroxscaffold_3G00251570 Rroxscaffold_3G00251870 Rroxscaffold_3G00252200 Rroxscaffold_3G00252210 Rroxscaffold_4G00279970 Rroxscaffold_4G00299970 Rroxscaffold_4G00300760 Rroxscaffold_4G00300780 Rroxscaffold_4G00300810 Rroxscaffold_4G00300850 Rroxscaffold_4G00307080 Rroxscaffold_4G00307100 Rroxscaffold_4G00313990 Rroxscaffold_6G00405080
rosa_rugosa Rorug01G0193600 Rorug01G0193700 Rorug01G0243800 Rorug01G0244000 Rorug01G0244000 Rorug01G0244400 Rorug01G0414300.1 Rorug01G0414500 Rorug01G0414600 Rorug02G0235600 Rorug02G0307900 Rorug02G0583100 Rorug02G0583200 Rorug02G0583300 Rorug05G0398000 Rorug05G0398100 Rorug05G0398200 Rorug05G0580300 Rorug05G0590300 Rorug06G0116000 Rorug06G0116100 Rorug07G0096800 Rorug07G0097100.1 Rorug07G0097200 Rorug07G0098600 Rorug07G0098600 Rorug07G0098700 Rorug07G0099100 Rorug07G0106100 Rorug07G0106200 Rorug07G0106200 Rorug07G0106300 Rorug07G0157600 Rorug07G0157700 Rorug07G0157700 Rorug07G0157800
rosa_samantha Rh1AG255500 Rh1AG256700 Rh1BG225800 Rh1BG226200 Rh1BG230000 Rh1CG195300 Rh1CG238400 Rh1CG238500 Rh1CG238900 Rh1CG239000 Rh1CG239300 Rh1CG239400 Rh1CG239800 Rh1CG240000 Rh1CG240200 Rh1CG240300 Rh1CG244300 Rh1CG406900 Rh1CG407300 Rh1CG407400 Rh2CG343600 Rh2DG383200 Rh3BG205900 Rh4AG404400 Rh4BG415500 Rh5AG455200 Rh5AG455600 Rh5CG497000 Rh5CG497200 Rh7AG228800 Rh7AG230400 Rh7AG230800 Rh7AG231200 Rh7AG231600 Rh7AG231800 Rh7AG232100 Rh7AG241600 Rh7BG236200 Rh7CG238200 Rh7CG239100 Rh7CG243400 Rh7CG244900
rosa_wichuraiana Rw0G023040 Rw1G017780 Rw1G022320 Rw1G022340 Rw1G022410 Rw1G022420 Rw1G022440 Rw1G022460 Rw1G022490 Rw1G022500 Rw1G022530 Rw1G022550 Rw1G022560 Rw1G022600 Rw1G023060 Rw1G038150 Rw1G038160 Rw2G008210 Rw2G022350 Rw2G029290 Rw4G015050 Rw4G019850 Rw5G024060 Rw5G042460 Rw7G019160 Rw7G019460 Rw7G019690 Rw7G019830 Rw7G019860 Rw7G019880 Rw7G019890 Rw7G019930 Rw7G019990 Rw7G020460 Rw7G025100 Rw7G025120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 360
Acc36I ACCTGC 1 cut(s) 2509
AccB1I GGYRCC 1 cut(s) 2375
AccB7I CCANNNNNTGG 3 cut(s) 1267, 1856, 2462
AccI GTMKAC 1 cut(s) 2198
AciI CCGC 3 cut(s) 2153, 2438, 2695
AclWI GGATC 3 cut(s) 994, 1354, 1377
AcoI YGGCCR 2 cut(s) 608, 1858
AcsI RAATTY 8 cut(s) 1015, 1114, 1585, 1672, 2148, 2292, 2364, 2502
AcuI CTGAAG 2 cut(s) 2247, 2369
AfaI GTAC 3 cut(s) 878, 1062, 1795
AfiI CCNNNNNNNGG 6 cut(s) 467, 982, 1267, 1856, 2386, 2462
AflII CTTAAG 1 cut(s) 2612
AflIII ACRYGT 3 cut(s) 573, 1004, 1251
AjnI CCWGG 5 cut(s) 45, 503, 1109, 2455, 2646
AjuI GAANNNNNNNTTGG 2 cut(s) 2070, 2102
Alw21I GWGCWC 2 cut(s) 648, 1214
Alw26I GTCTC 1 cut(s) 2537
AlwI GGATC 3 cut(s) 994, 1354, 1377
AlwNI CAGNNNCTG 1 cut(s) 2042
Ama87I CYCGRG 1 cut(s) 1064
AoxI GGCC 5 cut(s) 48, 145, 608, 1270, 1858
ApaI GGGCCC 1 cut(s) 1274
ApeKI GCWGC 4 cut(s) 198, 786, 861, 1943
ApoI RAATTY 8 cut(s) 1015, 1114, 1585, 1672, 2148, 2292, 2364, 2502
ArsI GACNNNNNNTTYG 2 cut(s) 881, 913
AseI ATTAAT 1 cut(s) 702
Asp700I GAANNNNTTC 1 cut(s) 1118
AspA2I CCTAGG 1 cut(s) 2542
AspLEI GCGC 1 cut(s) 1490
AspS9I GGNCC 8 cut(s) 49, 349, 449, 1270, 1271, 1550, 1960, 2432
AsuHPI GGTGA 2 cut(s) 314, 1891
AvaI CYCGRG 1 cut(s) 1064
AvaII GGWCC 5 cut(s) 349, 449, 1550, 1960, 2432
AvrII CCTAGG 1 cut(s) 2542
BaeGI GKGCMC 1 cut(s) 1274
BalI TGGCCA 2 cut(s) 610, 1860
BanI GGYRCC 1 cut(s) 2375
BanII GRGCYC 3 cut(s) 648, 1214, 1274
BarI GAAGNNNNNNTAC 2 cut(s) 819, 851
BbsI GAAGAC 3 cut(s) 1461, 1551, 2235
Bbv12I GWGCWC 2 cut(s) 648, 1214
BbvI GCAGC 4 cut(s) 185, 798, 873, 1930
BccI CCATC 4 cut(s) 1801, 2456, 2474, 2522
BciT130I CCWGG 5 cut(s) 47, 505, 1111, 2457, 2648
BciVI GTATCC 1 cut(s) 828
BclI TGATCA 1 cut(s) 378
BcoDI GTCTC 1 cut(s) 2537
BfaI CTAG 9 cut(s) 251, 584, 738, 1086, 1185, 1335, 1886, 1940, 2543
BfmI CTRYAG 2 cut(s) 1724, 2034
BfrI CTTAAG 1 cut(s) 2612
BfuAI ACCTGC 1 cut(s) 2509
BfuI GTATCC 1 cut(s) 828
BglII AGATCT 3 cut(s) 11, 253, 1396
BisI GCNGC 4 cut(s) 199, 787, 862, 1944
BlnI CCTAGG 1 cut(s) 2542
BlsI GCNGC 4 cut(s) 200, 788, 863, 1945
Bme1390I CCNGG 5 cut(s) 47, 505, 1111, 2457, 2648
Bme18I GGWCC 5 cut(s) 349, 449, 1550, 1960, 2432
BmeT110I CYCGRG 1 cut(s) 1064
BmgT120I GGNCC 8 cut(s) 49, 349, 449, 1270, 1271, 1550, 1960, 2432
BmiI GGNNCC 4 cut(s) 1272, 1552, 1581, 2377
BmrFI CCNGG 5 cut(s) 47, 505, 1111, 2457, 2648
BmsI GCATC 2 cut(s) 262, 1635
BoxI GACNNNNGTC 1 cut(s) 1555
BpiI GAAGAC 3 cut(s) 1461, 1551, 2235
BpmI CTGGAG 1 cut(s) 116
Bpu10I CCTNAGC 3 cut(s) 647, 1208, 1450
BpuEI CTTGAG 1 cut(s) 580
Bsa29I ATCGAT 1 cut(s) 1442
BsaBI GATNNNNATC 3 cut(s) 276, 678, 1221
BsaI GGTCTC 1 cut(s) 2537
BsaJI CCNNGG 5 cut(s) 957, 1417, 1816, 1850, 2542
BsaWI WCCGGW 1 cut(s) 2277
BsaXI ACNNNNNCTCC 2 cut(s) 1489, 1519
Bsc4I CCNNNNNNNGG 6 cut(s) 467, 982, 1267, 1856, 2386, 2462
Bse1I ACTGG 3 cut(s) 133, 1129, 2584
Bse3DI GCAATG 4 cut(s) 1490, 1578, 1996, 2561
Bse8I GATNNNNATC 3 cut(s) 276, 678, 1221
BseBI CCWGG 5 cut(s) 47, 505, 1111, 2457, 2648
BseCI ATCGAT 1 cut(s) 1442
BseDI CCNNGG 5 cut(s) 957, 1417, 1816, 1850, 2542
BseGI GGATG 2 cut(s) 160, 1650
BseJI GATNNNNATC 3 cut(s) 276, 678, 1221
BseLI CCNNNNNNNGG 6 cut(s) 467, 982, 1267, 1856, 2386, 2462
BseMI GCAATG 4 cut(s) 1490, 1578, 1996, 2561
BseMII CTCAG 6 cut(s) 367, 661, 930, 1028, 1199, 1227
BseNI ACTGG 3 cut(s) 133, 1129, 2584
BseSI GKGCMC 1 cut(s) 1274
BseXI GCAGC 4 cut(s) 185, 798, 873, 1930
BseYI CCCAGC 3 cut(s) 1267, 1273, 2566
BshFI GGCC 5 cut(s) 50, 147, 610, 1272, 1860
BshNI GGYRCC 1 cut(s) 2375
BshVI ATCGAT 1 cut(s) 1442
BsiHKAI GWGCWC 2 cut(s) 648, 1214
BsiHKCI CYCGRG 1 cut(s) 1064
BsiSI CCGG 1 cut(s) 2278
BslI CCNNNNNNNGG 6 cut(s) 467, 982, 1267, 1856, 2386, 2462
BsmAI GTCTC 1 cut(s) 2537
BsmI GAATGC 1 cut(s) 19
BsnI GGCC 5 cut(s) 50, 147, 610, 1272, 1860
Bso31I GGTCTC 1 cut(s) 2537
BsoBI CYCGRG 1 cut(s) 1064
Bsp120I GGGCCC 1 cut(s) 1270
Bsp1286I GDGCHC 3 cut(s) 648, 1214, 1274
Bsp19I CCATGG 2 cut(s) 1417, 1850
BspACI CCGC 3 cut(s) 2153, 2438, 2695
BspANI GGCC 5 cut(s) 50, 147, 610, 1272, 1860
BspCNI CTCAG 6 cut(s) 366, 660, 931, 1029, 1200, 1226
BspDI ATCGAT 1 cut(s) 1442
BspLI GGNNCC 4 cut(s) 1272, 1552, 1581, 2377
BspMI ACCTGC 1 cut(s) 2509
BspPI GGATC 3 cut(s) 994, 1354, 1377
BspQI GCTCTTC 1 cut(s) 132
BspT107I GGYRCC 1 cut(s) 2375
BspTI CTTAAG 1 cut(s) 2612
BspTNI GGTCTC 1 cut(s) 2537
BsrDI GCAATG 4 cut(s) 1490, 1578, 1996, 2561
BsrI ACTGG 3 cut(s) 133, 1129, 2584
BssECI CCNNGG 5 cut(s) 957, 1417, 1816, 1850, 2542
BssT1I CCWWGG 5 cut(s) 957, 1417, 1816, 1850, 2542
Bst2UI CCWGG 5 cut(s) 47, 505, 1111, 2457, 2648
Bst4CI ACNGT 3 cut(s) 1793, 1896, 2470
Bst6I CTCTTC 3 cut(s) 132, 723, 817
BstAFI CTTAAG 1 cut(s) 2612
BstC8I GCNNGC 6 cut(s) 123, 220, 626, 1578, 1991, 2311
BstDSI CCRYGG 2 cut(s) 1417, 1850
BstF5I GGATG 2 cut(s) 160, 1650
BstHHI GCGC 1 cut(s) 1490
BstMAI GTCTC 1 cut(s) 2537
BstMWI GCNNNNNNNGC 2 cut(s) 1577, 1716
BstNI CCWGG 5 cut(s) 47, 505, 1111, 2457, 2648
BstNSI RCATGY 5 cut(s) 125, 222, 437, 577, 1255
BstPAI GACNNNNGTC 1 cut(s) 1555
BstSCI CCNGG 5 cut(s) 45, 503, 1109, 2455, 2646
BstSFI CTRYAG 2 cut(s) 1724, 2034
BstSLI GKGCMC 1 cut(s) 1274
BstV1I GCAGC 4 cut(s) 185, 798, 873, 1930
BstV2I GAAGAC 3 cut(s) 1461, 1551, 2235
BstX2I RGATCY 4 cut(s) 11, 253, 1369, 1396
BstXI CCANNNNNNTGG 1 cut(s) 1418
BstYI RGATCY 4 cut(s) 11, 253, 1369, 1396
Bsu15I ATCGAT 1 cut(s) 1442
BsuI GTATCC 1 cut(s) 828
BsuRI GGCC 5 cut(s) 50, 147, 610, 1272, 1860
BsuTUI ATCGAT 1 cut(s) 1442
BtgI CCRYGG 2 cut(s) 1417, 1850
BtsCI GGATG 2 cut(s) 160, 1650
BtsIMutI CAGTG 5 cut(s) 288, 451, 1122, 2563, 2577
BveI ACCTGC 1 cut(s) 2509
Cac8I GCNNGC 6 cut(s) 123, 220, 626, 1578, 1991, 2311
CaiI CAGNNNCTG 1 cut(s) 2042
CfoI GCGC 1 cut(s) 1490
Cfr13I GGNCC 8 cut(s) 49, 349, 449, 1270, 1271, 1550, 1960, 2432
ClaI ATCGAT 1 cut(s) 1442
CseI GACGC 1 cut(s) 2587
Csp6I GTAC 3 cut(s) 877, 1061, 1794
CviQI GTAC 3 cut(s) 877, 1061, 1794
EaeI YGGCCR 2 cut(s) 608, 1858
Eam1104I CTCTTC 3 cut(s) 132, 723, 817
EarI CTCTTC 3 cut(s) 132, 723, 817
EciI GGCGGA 1 cut(s) 2142
Ecl136II GAGCTC 2 cut(s) 646, 1212
Eco130I CCWWGG 5 cut(s) 957, 1417, 1816, 1850, 2542
Eco147I AGGCCT 1 cut(s) 147
Eco24I GRGCYC 3 cut(s) 648, 1214, 1274
Eco31I GGTCTC 1 cut(s) 2537
Eco32I GATATC 1 cut(s) 2283
Eco47I GGWCC 5 cut(s) 349, 449, 1550, 1960, 2432
Eco53kI GAGCTC 2 cut(s) 646, 1212
Eco57I CTGAAG 2 cut(s) 2247, 2369
Eco88I CYCGRG 1 cut(s) 1064
EcoICRI GAGCTC 2 cut(s) 646, 1212
EcoO109I RGGNCCY 1 cut(s) 1550
EcoRI GAATTC 2 cut(s) 1114, 2364
EcoRII CCWGG 5 cut(s) 45, 503, 1109, 2455, 2646
EcoRV GATATC 1 cut(s) 2283
EcoT14I CCWWGG 5 cut(s) 957, 1417, 1816, 1850, 2542
EcoT38I GRGCYC 3 cut(s) 648, 1214, 1274
ErhI CCWWGG 5 cut(s) 957, 1417, 1816, 1850, 2542
FbaI TGATCA 1 cut(s) 378
FblI GTMKAC 1 cut(s) 2198
Fnu4HI GCNGC 4 cut(s) 199, 787, 862, 1944
FokI GGATG 2 cut(s) 167, 1657
FriOI GRGCYC 3 cut(s) 648, 1214, 1274
Fsp4HI GCNGC 4 cut(s) 199, 787, 862, 1944
FspBI CTAG 9 cut(s) 251, 584, 738, 1086, 1185, 1335, 1886, 1940, 2543
GlaI GCGC 1 cut(s) 1489
GluI GCNGC 4 cut(s) 199, 787, 862, 1944
GsaI CCCAGC 3 cut(s) 1271, 1277, 2570
GsuI CTGGAG 1 cut(s) 116
HaeIII GGCC 5 cut(s) 50, 147, 610, 1272, 1860
HapII CCGG 1 cut(s) 2278
HgaI GACGC 1 cut(s) 2587
HhaI GCGC 1 cut(s) 1490
Hin6I GCGC 1 cut(s) 1488
HinP1I GCGC 1 cut(s) 1488
HincII GTYRAC 2 cut(s) 1462, 1813
HindII GTYRAC 2 cut(s) 1462, 1813
HindIII AAGCTT 2 cut(s) 1447, 2219
HpaI GTTAAC 1 cut(s) 1462
HpaII CCGG 1 cut(s) 2278
HphI GGTGA 2 cut(s) 314, 1891
Hpy166II GTNNAC 8 cut(s) 449, 1166, 1462, 1748, 1813, 2199, 2432, 2606
Hpy188I TCNGA 6 cut(s) 901, 1038, 1216, 2044, 2190, 2642
Hpy8I GTNNAC 8 cut(s) 449, 1166, 1462, 1748, 1813, 2199, 2432, 2606
HpyAV CCTTC 4 cut(s) 821, 1267, 1788, 1933
HpyCH4III ACNGT 3 cut(s) 1793, 1896, 2470
HpyCH4IV ACGT 1 cut(s) 1006
HpyF10VI GCNNNNNNNGC 2 cut(s) 1577, 1716
HpySE526I ACGT 1 cut(s) 1006
HspAI GCGC 1 cut(s) 1488
Ksp22I TGATCA 1 cut(s) 378
KspAI GTTAAC 1 cut(s) 1462
LguI GCTCTTC 1 cut(s) 132
LmnI GCTCC 3 cut(s) 92, 1585, 1627
Lsp1109I GCAGC 4 cut(s) 185, 798, 873, 1930
LweI GCATC 2 cut(s) 262, 1635
MaeI CTAG 9 cut(s) 251, 584, 738, 1086, 1185, 1335, 1886, 1940, 2543
MaeII ACGT 1 cut(s) 1006
MaeIII GTNAC 3 cut(s) 576, 2237, 2575
MfeI CAATTG 1 cut(s) 410
MflI RGATCY 4 cut(s) 11, 253, 1369, 1396
MhlI GDGCHC 3 cut(s) 648, 1214, 1274
MlsI TGGCCA 2 cut(s) 610, 1860
MluNI TGGCCA 2 cut(s) 610, 1860
MlyI GAGTC 3 cut(s) 152, 415, 908
MmeI TCCRAC 4 cut(s) 61, 114, 1622, 2232
Mox20I TGGCCA 2 cut(s) 610, 1860
MroXI GAANNNNTTC 1 cut(s) 1118
MscI TGGCCA 2 cut(s) 610, 1860
MslI CAYNNNNRTG 1 cut(s) 2246
Msp20I TGGCCA 2 cut(s) 610, 1860
MspA1I CMGCKG 1 cut(s) 2440
MspCI CTTAAG 1 cut(s) 2612
MspI CCGG 1 cut(s) 2278
MspR9I CCNGG 5 cut(s) 47, 505, 1111, 2457, 2648
MunI CAATTG 1 cut(s) 410
Mva1269I GAATGC 1 cut(s) 19
MvaI CCWGG 5 cut(s) 47, 505, 1111, 2457, 2648
MwoI GCNNNNNNNGC 2 cut(s) 1577, 1716
NcoI CCATGG 2 cut(s) 1417, 1850
NlaIV GGNNCC 4 cut(s) 1272, 1552, 1581, 2377
NmuCI GTSAC 2 cut(s) 576, 2575
NspI RCATGY 5 cut(s) 125, 222, 437, 577, 1255
PaeI GCATGC 2 cut(s) 125, 222
PceI AGGCCT 1 cut(s) 147
PciI ACATGT 2 cut(s) 573, 1251
PciSI GCTCTTC 1 cut(s) 132
PctI GAATGC 1 cut(s) 19
PdmI GAANNNNTTC 1 cut(s) 1118
PflMI CCANNNNNTGG 3 cut(s) 1267, 1856, 2462
PfoI TCCNGGA 4 cut(s) 503, 1109, 2455, 2646
PkrI GCNGC 4 cut(s) 200, 788, 863, 1945
PleI GAGTC 3 cut(s) 152, 414, 908
PpsI GAGTC 3 cut(s) 152, 414, 908
PpuMI RGGWCCY 1 cut(s) 1550
PscI ACATGT 2 cut(s) 573, 1251
PshAI GACNNNNGTC 1 cut(s) 1555
PshBI ATTAAT 1 cut(s) 702
PsiI TTATAA 1 cut(s) 360
Psp124BI GAGCTC 2 cut(s) 648, 1214
Psp5II RGGWCCY 1 cut(s) 1550
Psp6I CCWGG 5 cut(s) 45, 503, 1109, 2455, 2646
PspFI CCCAGC 3 cut(s) 1267, 1273, 2566
PspGI CCWGG 5 cut(s) 45, 503, 1109, 2455, 2646
PspN4I GGNNCC 4 cut(s) 1272, 1552, 1581, 2377
PspOMI GGGCCC 1 cut(s) 1270
PspPI GGNCC 8 cut(s) 49, 349, 449, 1270, 1271, 1550, 1960, 2432
PspPPI RGGWCCY 1 cut(s) 1550
PstNI CAGNNNCTG 1 cut(s) 2042
PsuI RGATCY 4 cut(s) 11, 253, 1369, 1396
RsaI GTAC 3 cut(s) 878, 1062, 1795
RsaNI GTAC 3 cut(s) 877, 1061, 1794
RseI CAYNNNNRTG 1 cut(s) 2246
SacI GAGCTC 2 cut(s) 648, 1214
SapI GCTCTTC 1 cut(s) 132
SatI GCNGC 4 cut(s) 199, 787, 862, 1944
Sau96I GGNCC 8 cut(s) 49, 349, 449, 1270, 1271, 1550, 1960, 2432
SchI GAGTC 3 cut(s) 152, 415, 908
ScrFI CCNGG 5 cut(s) 47, 505, 1111, 2457, 2648
SduI GDGCHC 3 cut(s) 648, 1214, 1274
SfaNI GCATC 2 cut(s) 262, 1635
SfcI CTRYAG 2 cut(s) 1724, 2034
SinI GGWCC 5 cut(s) 349, 449, 1550, 1960, 2432
SmiMI CAYNNNNRTG 1 cut(s) 2246
SmlI CTYRAG 2 cut(s) 559, 2612
SmoI CTYRAG 2 cut(s) 559, 2612
SphI GCATGC 2 cut(s) 125, 222
SseBI AGGCCT 1 cut(s) 147
SsiI CCGC 3 cut(s) 2153, 2438, 2695
SspI AATATT 3 cut(s) 532, 762, 1978
SspMI CTAG 9 cut(s) 251, 584, 738, 1086, 1185, 1335, 1886, 1940, 2543
SstI GAGCTC 2 cut(s) 648, 1214
StuI AGGCCT 1 cut(s) 147
StyD4I CCNGG 5 cut(s) 45, 503, 1109, 2455, 2646
StyI CCWWGG 5 cut(s) 957, 1417, 1816, 1850, 2542
TaaI ACNGT 3 cut(s) 1793, 1896, 2470
TaiI ACGT 1 cut(s) 1009
TaqI TCGA 3 cut(s) 282, 1312, 1442
TatI WGTACW 1 cut(s) 876
TscAI CASTG 5 cut(s) 295, 451, 1129, 2563, 2584
TseFI GTSAC 2 cut(s) 576, 2575
TseI GCWGC 4 cut(s) 198, 786, 861, 1943
Tsp45I GTSAC 2 cut(s) 576, 2575
TspDTI ATGAA 5 cut(s) 382, 1421, 1940, 2258, 2495
TspRI CASTG 5 cut(s) 295, 451, 1129, 2563, 2584
Van91I CCANNNNNTGG 3 cut(s) 1267, 1856, 2462
Vha464I CTTAAG 1 cut(s) 2612
VpaK11BI GGWCC 5 cut(s) 349, 449, 1550, 1960, 2432
VspI ATTAAT 1 cut(s) 702
XapI RAATTY 8 cut(s) 1015, 1114, 1585, 1672, 2148, 2292, 2364, 2502
XbaI TCTAGA 2 cut(s) 250, 583
XceI RCATGY 5 cut(s) 125, 222, 437, 577, 1255
XcmI CCANNNNNNNNNTGG 2 cut(s) 1804, 1954
XmaJI CCTAGG 1 cut(s) 2542
XmiI GTMKAC 1 cut(s) 2198
XmnI GAANNNNTTC 1 cut(s) 1118
XspI CTAG 9 cut(s) 251, 584, 738, 1086, 1185, 1335, 1886, 1940, 2543
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.