Rw1G022550

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
Physical Location & Seq
Reverse (-)
47710724 .. 47714170
3447 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G022550.1

Sequence Viewer

Length: 3447 bp
ATGGAGTTGGGAAGGTGGCTCAGACATGCTTATGCAATATCAGTTGTGCTTCTTCTGCAAATCAACGCTTCCTCATCCCTCGGTCACCAGCATGCTAACGTGACGGCAAGGTGCCTAGAGAGGGAGAGGGATGCACTCCTTGCTATCAAAGGAGACCTGGTGGATGAATACAACCTGCTCTCTTCGTGGGGAAGCGAAGCCAAAAAGCGAGACTGTTGCGGATGGGAAAGAGTCCACTGCGATCACCAGACTGGCCATGTTATTCAACTTCATCTGAATGCAGAAAAAAAGGAGGTAATCCCGCAACTTAAGTATCCGTGGGAAACTTTGAATGGTGAAATTAGTCCTAAAATCATTGAGTTGCAGCATTTGGAATATTTGGACCTTAGTTTCAATTTCTTCAATGCCAGCCAAATTCCAGCGCTCATTTGTTCTCTATCCAATTTAAGACACTTAGATCTTAGTCTGAATGACCTCACCGGCAGCAAAATTCCAGCGCTCATTGGTAACCTGACCAACTTAAGATATCTAGATCTCTCTCGTACTCGCTTGAGTGGTGAAACTCCATATCATCAGCTTGGAAATCTTACTCACTTGCAGTATCTCAATCTCGGGCGAAACGATTTCACTCGGGCTGTAGAAAATCTCAATTGGCTCCCACATCTTTCTTCTTTAAAAAACCTCGACCTGAGTTGGGCCAATCTAAGTAAGGCTTTCGAGTGGCTGGAAACAGTAAACAAGCTCCCCAATTTAAGAAACTTGACCTTGAGCTTCTGTAGTCTTCCTCCTCCAATTCTGTCCACTCTTTCTCACATAAATTCTTCCAATTCTCTTCTTAGTGTTGATTTGTCTGGAAATCTTGCTGTCGGTTCTTCGATATTCAAATGGTTGTGCAACTTCAATACTACCCTTGTTCATCTTGACCTCTATTTCAACCAATTAAGTGGTATGATTCCCGATGTTTTCAGAAACATGAGCTCACTTGCAATTCTTGACCTCTCTTCCAACCAATTAAGTGGTTTGATTCCCGATGTTTTCGCAAACATGAGCTCACTTACAAATCTTGACCTCTCTTCCAACCAATTAAGTGACTTGATTCCCAATGCTTTCGCAAACATGAGCTCACTTACAAATCTTGACCTCTCCTTTAACCTACTTGAAGGAGGGATCTCAACATCCATTGGCCAATTATGTAAGTTGCAAACCTTGGCCATTGCAGAGAGTAGGTTGGATGGACAGTTCTCTGAGTTTGTTCAAGCATTGTCTATATGTACTCAAAACTCATTGGAGAGCTTGAATCTCTATCATAATGATCTTGCCGGGTCATTTCCTAATCTTGCAAACTTTCAATCATTGAAGGAATTATATCTCTCTGAAAATCAGTTGAGTGAAACAATTCCTGAGAGTATTGGAAAGTTGTCTTCTTTAGTGACATTAGATCTCGCAGAAAATAGGTTAAGCGGACTGATACCGGAAAGTATTGGGCAAATGTCATTGTTGAGAGATTTGTATCTAGAGGGAAATCAATTAAGTGGAATGATACCGGAAAGTATTGGGCAAATGTCATTGTTGGAAGTGTTGTATCTACAGAGAAATCAATTAAGCGGAGTGATACCGGAAAGTATTGGGAAATTGTCAGCCTTGCAAATATTAGAGCTAGCCGGTAATCGATTAAGCGGGAAAGTACCAGAAAGTATTGGACAATGCTCAGAACTGTTCAATATGAATCTTAGTGAGAATTCTTTGGAAGGGATGATGTCGGAAGTTCATTTCACAAAACTGTCCGCATTAAAGTTTTTGGATTTATCCTATAATCCATTAGTTTTCAACGTCAATTCTGATTGGGTTCCTCCATTTCAATTGTATTCTATAAGTCTGAAATCTTGTAAGGTCGGGCCATATTTCCCAAACTGGCTTCGAACTCAAAAAAGTTATTTCTACCTTGATATTTCTTATGCTGGAATTTCAGATGTCCTCCCAAGTTGGTTCTGGAGTCTCCTTGGTATAACTTCGATAATAGATATCTCTCATAATCAAATTAGAGGAACATTTGAGAGTTCAACATTGAATGTTACATCATTGAGTGTACATGAAGTTCATTTTGGTTCGAATCAATTCAAAGGTCCAATACCGTCAGTTTTATTAGATGCAACATATTTGGATCTCTCTGATAATAAATTTTCAGAGATGAATTCCTTGTGTGCTGCTTCGAAGATTAAAAGTTTGAAGTTTCTCAATCTCTCTGCCAACCATGCTACAGGAGAAATTCCAAATTGTTGGAGACATTTCATCAATCTAGAACTGCTCGATATGAGTAGCAATGCTTTTTCCGGGAAAATCCCAACCTCAATAGGCTCTTTAGTTCGAATGGAAACATTGAAATTAAGACGCAACAGACTTGTGGGAGAATTGCCTTCATCCTTGAAGAACTGTAAGAGCTTAAAAGTTATTGATCTCGGAGACAATAAGCTTTCAGGATCAGTCCCTGAATGGTTAGGGGTTAGTTTTCCAAATTTGGTTATACTAATGCTTCAATCTAATCAGTTTAGAGGGAGCTTGCCTTTACAGTTATGTCATTTAAAGCACATTCAGATTTTGGATTTCTCTGTGAATGAAATCTCTGGAACTATACCTAAATGTCTCGGTAATATGACTTGTTTAACTCAAGGAGGAAATTCTAGTCTAACTATCAGACATTCTTTTCATCCATCTTTTGTACAAGCACCTATGTATGCGGAAGCACCTATGTATGCGGAAGCAACTATGTATGCAGAAGCACCTGCAGAAGCACCCGCGATGTCATCTGATTACTATGAGGATGATGCAACCTTCATGTGGAAAGGAAGAATGTCTGCTTACAAAAGTATTTTGGGACTTGTCAAGAGAATTGATCTCTCAAGCAACAAAATAATAGGGGAAATTCCAAGTGAGATCACTCATCTTGTTGGTTTGGTTTCTTTGAACCTTTCAAGAAACCATCTAACAGGATATATTCCTTCACAGATTGGAAAGTTGCAGTCATTAGATTCTCTTGATTTGTCAAGAAACTGGATAAATGGGGAGATTCCAACAAGCCTTGCTCAGATCGATCGACTTGCTTACTTGGACCTGTCATACAACGACTTATCTGGTGAAATTCCAACTGGTACTCAACTCCAAGTCGCTTCCTCTTTTGCTGGAAATCTTAAATTGTGTGGATTTCCACTTGAAAAGATTTGTGATCCGGAAGGAAACGGTCGGCCAAATGTCTCGAGCAATGAAGAAGATCCAGATGAGCTCATCACGCTGGGTTTCTACATTAGTCTAGGAGTTGGATTTGCTGTTGGATTTTGGGGAGTCTCTGGGAGCTTGATATTCAAGAGGTCATGGAGATATGCATACTACAACTTCTTGAATGCTTCAAATGATTGGCTTTATGTGAAGGTTGCTTTGATCAGACGGCAATAA

Protein Analysis

1148

Amino Acids

127.47

Weight (kDa)

5.61

Isoelectric Point (pI)

36.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 40 - 81 8.3e-08 Leucine rich repeat N-terminal domain
LRR_14 PF23598 117 - 309 1.7e-12 Leucine-rich repeat region
LRR_8 PF13855 303 - 362 3.7e-13 Leucine rich repeat
LRR_14 PF23598 316 - 461 9e-06 Leucine-rich repeat region
LRR_8 PF13855 327 - 386 7.2e-13 Leucine rich repeat
LRR_8 PF13855 351 - 403 2.7e-06 Leucine rich repeat
LRR_14 PF23598 443 - 641 4.1e-15 Leucine-rich repeat region
LRR_8 PF13855 451 - 510 2.8e-11 Leucine rich repeat
LRR_8 PF13855 515 - 558 2.8e-06 Leucine rich repeat
LRR_8 PF13855 790 - 849 5.2e-06 Leucine rich repeat
LRR_14 PF23598 977 - 1040 7.3e-06 Leucine-rich repeat region
LRR_8 PF13855 984 - 1042 3.8e-08 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000028)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g45420 FvH4_4g14031 FvH4_5g20780 FvH4_6g28530 FvH4_7g14020 FvH4_7g14030 FvH4_7g14040 FvH4_7g14050 FvH4_7g14060 FvH4_7g14070 FvH4_7g14090 FvH4_7g14110 FvH4_7g14140 FvH4_7g14450
malus_domestica MD00G1189100.v1.1 MD01G1018600.v1.1 MD01G1053800.v1.1 MD01G1053900.v1.1 MD01G1054000.v1.1 MD01G1054100.v1.1 MD01G1056700.v1.1 MD01G1057000.v1.1 MD01G1057300.v1.1 MD01G1057400.v1.1 MD01G1061600.v1.1 MD01G1061800.v1.1 MD01G1061900.v1.1 MD01G1062000.v1.1 MD01G1062400.v1.1 MD01G1062500.v1.1 MD01G1063200.v1.1 MD01G1063300.v1.1 MD01G1063400.v1.1 MD01G1063700.v1.1 MD01G1063900.v1.1 MD01G1064200.v1.1 MD01G1064300.v1.1 MD01G1064400.v1.1 MD01G1064600.v1.1 MD01G1064700.v1.1 MD01G1181100.v1.1 MD01G1212300.v1.1 MD01G1212500.v1.1 MD01G1212600.v1.1 MD02G1271900.v1.1 MD07G1136500.v1.1 MD07G1139300.v1.1 MD07G1141200.v1.1 MD07G1144700.v1.1 MD08G1144200.v1.1 MD14G1186300.v1.1 MD14G1186500.v1.1 MD14G1186700.v1.1 MD14G1186800.v1.1 MD15G1351300.v1.1 MD15G1439500.v1.1
prunus_persica Prupe.1G067000_v2.0.a1 Prupe.2G077400_v2.0.a1 Prupe.2G077700_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078600_v2.0.a1 Prupe.2G078800_v2.0.a1 Prupe.2G099600_v2.0.a1 Prupe.2G099700_v2.0.a1 Prupe.2G155100_v2.0.a1 Prupe.2G155500_v2.0.a1 Prupe.2G155600_v2.0.a1 Prupe.2G155800_v2.0.a1 Prupe.2G155900_v2.0.a1 Prupe.2G156100_v2.0.a1 Prupe.2G166100_v2.0.a1 Prupe.2G166300_v2.0.a1 Prupe.2G167500_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G168400_v2.0.a1 Prupe.2G168700_v2.0.a1 Prupe.2G168800_v2.0.a1 Prupe.2G169000_v2.0.a1 Prupe.2G169100_v2.0.a1 Prupe.2G169200_v2.0.a1 Prupe.2G169500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G172300_v2.0.a1 Prupe.2G304800_v2.0.a1 Prupe.4G264800_v2.0.a1 Prupe.4G265000_v2.0.a1 Prupe.5G051900_v2.0.a1 Prupe.5G052000_v2.0.a1
pyrus_communis pycom01g08380 pycom01g08430 pycom01g08490 pycom01g08520 pycom01g08540 pycom01g08550 pycom01g08600 pycom01g08630 pycom01g08660 pycom01g08720 pycom01g09180 pycom01g09200 pycom01g09210 pycom01g09270 pycom01g09280 pycom01g09300 pycom01g09380 pycom01g19110 pycom01g22260 pycom01g22310 pycom01g22330 pycom01g22350 pycom01g22360 pycom02g23250 pycom07g13420 pycom07g13670 pycom07g13900 pycom07g13910 pycom07g13960 pycom07g13970 pycom07g25680 pycom11g22830
rosa_chinensis RchiOBHm_Chr0c22g0500431 RchiOBHm_Chr0c22g0500441 RchiOBHm_Chr0c22g0500561 RchiOBHm_Chr0c22g0500571 RchiOBHm_Chr0c22g0500611 RchiOBHm_Chr0c22g0500621 RchiOBHm_Chr0c22g0500631 RchiOBHm_Chr0c22g0500681 RchiOBHm_Chr1g0348221 RchiOBHm_Chr1g0348251 RchiOBHm_Chr1g0352861 RchiOBHm_Chr1g0352871 RchiOBHm_Chr1g0352891 RchiOBHm_Chr1g0352901 RchiOBHm_Chr1g0354671 RchiOBHm_Chr1g0354701 RchiOBHm_Chr1g0354711 RchiOBHm_Chr1g0354751 RchiOBHm_Chr1g0354761 RchiOBHm_Chr1g0354841 RchiOBHm_Chr1g0354851 RchiOBHm_Chr1g0354881 RchiOBHm_Chr1g0354971 RchiOBHm_Chr1g0354981 RchiOBHm_Chr1g0354991 RchiOBHm_Chr1g0355001 RchiOBHm_Chr1g0355011 RchiOBHm_Chr1g0355021 RchiOBHm_Chr1g0355861 RchiOBHm_Chr1g0379671 RchiOBHm_Chr1g0379681 RchiOBHm_Chr2g0096591 RchiOBHm_Chr2g0132821 RchiOBHm_Chr3g0454901 RchiOBHm_Chr3g0472711 RchiOBHm_Chr4g0400791 RchiOBHm_Chr5g0069481 RchiOBHm_Chr5g0069511 RchiOBHm_Chr5g0069551 RchiOBHm_Chr6g0254651 RchiOBHm_Chr6g0259721 RchiOBHm_Chr7g0205911 RchiOBHm_Chr7g0206401 RchiOBHm_Chr7g0206571 RchiOBHm_Chr7g0206581 RchiOBHm_Chr7g0206621 RchiOBHm_Chr7g0206631 RchiOBHm_Chr7g0206641 RchiOBHm_Chr7g0206681 RchiOBHm_Chr7g0206691 RchiOBHm_Chr7g0206751 RchiOBHm_Chr7g0206761 RchiOBHm_Chr7g0206851 RchiOBHm_Chr7g0206911 RchiOBHm_Chr7g0206921 RchiOBHm_Chr7g0207001 RchiOBHm_Chr7g0207011 RchiOBHm_Chr7g0207031 RchiOBHm_Chr7g0207101 RchiOBHm_Chr7g0207161 RchiOBHm_Chr7g0207201 RchiOBHm_Chr7g0207271 RchiOBHm_Chr7g0207301 RchiOBHm_Chr7g0207311 RchiOBHm_Chr7g0207421 RchiOBHm_Chr7g0207481 RchiOBHm_Chr7g0207491 RchiOBHm_Chr7g0207501 RchiOBHm_Chr7g0207521 RchiOBHm_Chr7g0207531 RchiOBHm_Chr7g0207561 RchiOBHm_Chr7g0207571 RchiOBHm_Chr7g0207581 RchiOBHm_Chr7g0207601 RchiOBHm_Chr7g0207621 RchiOBHm_Chr7g0207631 RchiOBHm_Chr7g0207651 RchiOBHm_Chr7g0207661 RchiOBHm_Chr7g0207711 RchiOBHm_Chr7g0207761 RchiOBHm_Chr7g0207801 RchiOBHm_Chr7g0208821 RchiOBHm_Chr7g0208831 RchiOBHm_Chr7g0208841 RchiOBHm_Chr7g0213601 RchiOBHm_Chr7g0215981 RchiOBHm_Chr7g0216021
rosa_laevigata RLG00000003193 RLG00000003194 RLG00000003287 RLG00000003288 RLG00000003289 RLG00000003293 RLG00000003294 RLG00000003295 RLG00000003297 RLG00000003299 RLG00000003301 RLG00000003327 RLG00000003347 RLG00000016653 RLG00000018642 RLG00000018643 RLG00000019285 RLG00000022542 RLG00000026368 RLG00000026371 RLG00000028124 RLG00000028125 RLG00000028183 RLG00000028184 RLG00000028185 RLG00000028188 RLG00000028673 RLG00000029267 RLG00000029325 RLG00000029674 RLG00000032883 RLG00000036055 RLG00000036058 RLG00000036065 RLG00000036068 RLG00000036071 RLG00000036072 RLG00000036075 RLG00000036076
rosa_multiflora Rmu_co8250183.1_g000001 Rmu_co8271981.1_g000001 Rmu_co8410829.1_g000001 Rmu_co8432879.1_g000001 Rmu_co8441941.1_g000001 Rmu_sc0000076.1_g000031 Rmu_sc0000738.1_g000038 Rmu_sc0000848.1_g000003 Rmu_sc0000848.1_g000014 Rmu_sc0000848.1_g000015 Rmu_sc0000848.1_g000016 Rmu_sc0001264.1_g000001 Rmu_sc0002284.1_g000018 Rmu_sc0002356.1_g000011 Rmu_sc0003020.1_g000003 Rmu_sc0003115.1_g000001 Rmu_sc0003115.1_g000002 Rmu_sc0003115.1_g000003 Rmu_sc0003115.1_g000004 Rmu_sc0003115.1_g000005 Rmu_sc0003115.1_g000008 Rmu_sc0003115.1_g000010 Rmu_sc0003115.1_g000011 Rmu_sc0003115.1_g000014 Rmu_sc0003565.1_g000002 Rmu_sc0003652.1_g000013 Rmu_sc0003652.1_g000015 Rmu_sc0003652.1_g000016 Rmu_sc0003652.1_g000019 Rmu_sc0003940.1_g000001 Rmu_sc0003940.1_g000004 Rmu_sc0003940.1_g000009 Rmu_sc0004084.1_g000010 Rmu_sc0004705.1_g000021 Rmu_sc0004972.1_g000007 Rmu_sc0004987.1_g000002 Rmu_sc0004987.1_g000006 Rmu_sc0005065.1_g000018 Rmu_sc0005065.1_g000029 Rmu_sc0005391.1_g000002 Rmu_sc0005633.1_g000003 Rmu_sc0005633.1_g000008 Rmu_sc0006632.1_g000014 Rmu_sc0006632.1_g000018 Rmu_sc0006681.1_g000010 Rmu_sc0006681.1_g000011 Rmu_sc0006733.1_g000003 Rmu_sc0007385.1_g000005 Rmu_sc0007385.1_g000007 Rmu_sc0007385.1_g000009 Rmu_sc0007385.1_g000016 Rmu_sc0007645.1_g000002 Rmu_sc0007645.1_g000003 Rmu_sc0007645.1_g000022 Rmu_sc0007828.1_g000008 Rmu_sc0008509.1_g000003 Rmu_sc0008509.1_g000015 Rmu_sc0008509.1_g000016 Rmu_sc0008509.1_g000020 Rmu_sc0008509.1_g000030 Rmu_sc0008509.1_g000041 Rmu_sc0008756.1_g000001 Rmu_sc0008756.1_g000003 Rmu_sc0013028.1_g000002 Rmu_sc0013028.1_g000003 Rmu_sc0013028.1_g000005 Rmu_sc0013160.1_g000001 Rmu_sc0014454.1_g000009 Rmu_sc0014455.1_g000007 Rmu_sc0014659.1_g000004 Rmu_sc0017798.1_g000002 Rmu_sc0017798.1_g000004 Rmu_sc0029608.1_g000001 Rmu_sc0037861.1_g000001 Rmu_sc0038750.1_g000001 Rmu_sc0042995.1_g000001 Rmu_ssc0000161.1_g000017
rosa_roxburghii Rroxscaffold_1G00009180 Rroxscaffold_1G00009190 Rroxscaffold_1G00011450 Rroxscaffold_1G00011480 Rroxscaffold_2G00111660 Rroxscaffold_2G00113570 Rroxscaffold_2G00122140 Rroxscaffold_3G00243730 Rroxscaffold_3G00245750 Rroxscaffold_3G00245760 Rroxscaffold_3G00250220 Rroxscaffold_3G00251160 Rroxscaffold_3G00251270 Rroxscaffold_3G00251280 Rroxscaffold_3G00251300 Rroxscaffold_3G00251340 Rroxscaffold_3G00251350 Rroxscaffold_3G00251390 Rroxscaffold_3G00251400 Rroxscaffold_3G00251560 Rroxscaffold_3G00251570 Rroxscaffold_3G00251870 Rroxscaffold_3G00252200 Rroxscaffold_3G00252210 Rroxscaffold_4G00279970 Rroxscaffold_4G00299970 Rroxscaffold_4G00300760 Rroxscaffold_4G00300780 Rroxscaffold_4G00300810 Rroxscaffold_4G00300850 Rroxscaffold_4G00307080 Rroxscaffold_4G00307100 Rroxscaffold_4G00313990 Rroxscaffold_6G00405080
rosa_rugosa Rorug01G0193600 Rorug01G0193700 Rorug01G0243800 Rorug01G0244000 Rorug01G0244000 Rorug01G0244400 Rorug01G0414300.1 Rorug01G0414500 Rorug01G0414600 Rorug02G0235600 Rorug02G0307900 Rorug02G0583100 Rorug02G0583200 Rorug02G0583300 Rorug05G0398000 Rorug05G0398100 Rorug05G0398200 Rorug05G0580300 Rorug05G0590300 Rorug06G0116000 Rorug06G0116100 Rorug07G0096800 Rorug07G0097100.1 Rorug07G0097200 Rorug07G0098600 Rorug07G0098600 Rorug07G0098700 Rorug07G0099100 Rorug07G0106100 Rorug07G0106200 Rorug07G0106200 Rorug07G0106300 Rorug07G0157600 Rorug07G0157700 Rorug07G0157700 Rorug07G0157800
rosa_samantha Rh1AG255500 Rh1AG256700 Rh1BG225800 Rh1BG226200 Rh1BG230000 Rh1CG195300 Rh1CG238400 Rh1CG238500 Rh1CG238900 Rh1CG239000 Rh1CG239300 Rh1CG239400 Rh1CG239800 Rh1CG240000 Rh1CG240200 Rh1CG240300 Rh1CG244300 Rh1CG406900 Rh1CG407300 Rh1CG407400 Rh2CG343600 Rh2DG383200 Rh3BG205900 Rh4AG404400 Rh4BG415500 Rh5AG455200 Rh5AG455600 Rh5CG497000 Rh5CG497200 Rh7AG228800 Rh7AG230400 Rh7AG230800 Rh7AG231200 Rh7AG231600 Rh7AG231800 Rh7AG232100 Rh7AG241600 Rh7BG236200 Rh7CG238200 Rh7CG239100 Rh7CG243400 Rh7CG244900
rosa_wichuraiana Rw0G023040 Rw1G017780 Rw1G022320 Rw1G022340 Rw1G022410 Rw1G022420 Rw1G022440 Rw1G022460 Rw1G022490 Rw1G022500 Rw1G022530 Rw1G022550 Rw1G022560 Rw1G022600 Rw1G023060 Rw1G038150 Rw1G038160 Rw2G008210 Rw2G022350 Rw2G029290 Rw4G015050 Rw4G019850 Rw5G024060 Rw5G042460 Rw7G019160 Rw7G019460 Rw7G019690 Rw7G019830 Rw7G019860 Rw7G019880 Rw7G019890 Rw7G019930 Rw7G019990 Rw7G020460 Rw7G025100 Rw7G025120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 2788
Acc36I ACCTGC 2 cut(s) 183, 2788
AccB1I GGYRCC 1 cut(s) 111
AccII CGCG 1 cut(s) 2795
AccIII TCCGGA 1 cut(s) 3223
AciI CCGC 9 cut(s) 219, 302, 1461, 1605, 1677, 1785, 2735, 2753, 2793
AclWI GGATC 5 cut(s) 1175, 2169, 2485, 3215, 3260
AcoI YGGCCR 4 cut(s) 253, 1183, 1209, 3239
AfaI GTAC 6 cut(s) 544, 1273, 1686, 2088, 2718, 3148
AfeI AGCGCT 2 cut(s) 423, 498
AfiI CCNNNNNNNGG 3 cut(s) 121, 694, 2835
AflII CTTAAG 2 cut(s) 308, 520
AjnI CCWGG 1 cut(s) 156
AjuI GAANNNNNNNTTGG 2 cut(s) 2085, 2117
AloI GAACNNNNNNTCC 2 cut(s) 1223, 1255
Alw21I GWGCWC 4 cut(s) 980, 1052, 1124, 3279
Alw26I GTCTC 8 cut(s) 147, 204, 2000, 2275, 2454, 2645, 3253, 3343
AlwI GGATC 5 cut(s) 1175, 2169, 2485, 3215, 3260
AlwNI CAGNNNCTG 1 cut(s) 2486
Ama87I CYCGRG 3 cut(s) 611, 630, 3250
Aor13HI TCCGGA 1 cut(s) 3223
Aor51HI AGCGCT 2 cut(s) 423, 498
AoxI GGCC 6 cut(s) 253, 696, 1183, 1209, 1895, 3239
ApeKI GCWGC 3 cut(s) 364, 483, 2204
Asp700I GAANNNNTTC 2 cut(s) 1395, 2114
AspLEI GCGC 2 cut(s) 424, 499
AspS9I GGNCC 5 cut(s) 382, 696, 1895, 2123, 3106
AsuC2I CCSGG 2 cut(s) 1321, 2332
AsuHPI GGTGA 6 cut(s) 77, 236, 347, 469, 569, 3143
AsuII TTCGAA 4 cut(s) 1918, 2108, 2210, 2365
AsuNHI GCTAGC 1 cut(s) 1657
AvaI CYCGRG 3 cut(s) 611, 630, 3250
AvaII GGWCC 3 cut(s) 382, 2123, 3106
BaeI ACNNNNGTAYC 2 cut(s) 296, 329
BalI TGGCCA 3 cut(s) 255, 1185, 1211
BanI GGYRCC 1 cut(s) 111
BanII GRGCYC 4 cut(s) 980, 1052, 1124, 3279
BbsI GAAGAC 2 cut(s) 773, 1413
Bbv12I GWGCWC 4 cut(s) 980, 1052, 1124, 3279
BbvI GCAGC 3 cut(s) 376, 495, 2191
BccI CCATC 4 cut(s) 216, 1226, 2716, 2985
BceAI ACGGC 1 cut(s) 120
BcgI CGANNNNNNTGC 4 cut(s) 198, 232, 3077, 3111
BciT130I CCWGG 1 cut(s) 158
BciVI GTATCC 1 cut(s) 324
BclI TGATCA 1 cut(s) 3432
BcnI CCSGG 2 cut(s) 1321, 2332
BcoDI GTCTC 8 cut(s) 147, 204, 2000, 2275, 2454, 2645, 3253, 3343
BfaI CTAG 7 cut(s) 116, 530, 1514, 1658, 2297, 2679, 3305
BfmI CTRYAG 5 cut(s) 636, 775, 1586, 2256, 2781
BfoI RGCGCY 2 cut(s) 425, 500
BfrI CTTAAG 2 cut(s) 308, 520
BfuAI ACCTGC 2 cut(s) 183, 2788
BfuI GTATCC 1 cut(s) 324
BglII AGATCT 3 cut(s) 457, 532, 1438
BisI GCNGC 3 cut(s) 365, 484, 2205
BlsI GCNGC 3 cut(s) 366, 485, 2206
Bme1390I CCNGG 3 cut(s) 158, 1321, 2332
Bme18I GGWCC 3 cut(s) 382, 2123, 3106
BmeT110I CYCGRG 3 cut(s) 611, 630, 3250
BmgT120I GGNCC 5 cut(s) 382, 696, 1895, 2123, 3106
BmiI GGNNCC 3 cut(s) 113, 656, 1848
BmrFI CCNGG 3 cut(s) 158, 1321, 2332
BmsI GCATC 3 cut(s) 121, 2137, 2812
BmtI GCTAGC 1 cut(s) 1661
BpiI GAAGAC 2 cut(s) 773, 1413
BpmI CTGGAG 1 cut(s) 2011
Bpu14I TTCGAA 4 cut(s) 1918, 2108, 2210, 2365
BpuEI CTTGAG 4 cut(s) 571, 787, 2649, 2881
BpuMI CCSGG 2 cut(s) 1321, 2332
Bsa29I ATCGAT 2 cut(s) 1669, 3087
BsaBI GATNNNNATC 1 cut(s) 1509
BsaI GGTCTC 1 cut(s) 147
BsaJI CCNNGG 4 cut(s) 79, 317, 1206, 1999
BsaWI WCCGGW 4 cut(s) 1471, 1543, 1615, 3223
BsaXI ACNNNNNCTCC 2 cut(s) 144, 174
Bsc4I CCNNNNNNNGG 3 cut(s) 121, 694, 2835
Bse118I RCCGGY 2 cut(s) 479, 1661
Bse1I ACTGG 4 cut(s) 256, 1916, 3053, 3148
Bse3DI GCAATG 3 cut(s) 1212, 2326, 3262
Bse8I GATNNNNATC 1 cut(s) 1509
BseAI TCCGGA 1 cut(s) 3223
BseBI CCWGG 1 cut(s) 158
BseCI ATCGAT 2 cut(s) 1669, 3087
BseDI CCNNGG 4 cut(s) 79, 317, 1206, 1999
BseJI GATNNNNATC 1 cut(s) 1509
BseLI CCNNNNNNNGG 3 cut(s) 121, 694, 2835
BseMI GCAATG 3 cut(s) 1212, 2326, 3262
BseMII CTCAG 6 cut(s) 34, 680, 1236, 1392, 1722, 3095
BseNI ACTGG 4 cut(s) 256, 1916, 3053, 3148
BseRI GAGGAG 1 cut(s) 777
BseXI GCAGC 3 cut(s) 376, 495, 2191
BseYI CCCAGC 1 cut(s) 3286
Bsh1236I CGCG 1 cut(s) 2795
Bsh1285I CGRYCG 2 cut(s) 3091, 3238
BshFI GGCC 6 cut(s) 255, 698, 1185, 1211, 1897, 3241
BshNI GGYRCC 1 cut(s) 111
BshVI ATCGAT 2 cut(s) 1669, 3087
BsiEI CGRYCG 2 cut(s) 3091, 3238
BsiHKAI GWGCWC 4 cut(s) 980, 1052, 1124, 3279
BsiHKCI CYCGRG 3 cut(s) 611, 630, 3250
BsiSI CCGG 8 cut(s) 480, 1320, 1472, 1544, 1616, 1662, 2331, 3224
BslFI GGGAC 2 cut(s) 2468, 2886
BslI CCNNNNNNNGG 3 cut(s) 121, 694, 2835
BsmAI GTCTC 8 cut(s) 147, 204, 2000, 2275, 2454, 2645, 3253, 3343
BsmFI GGGAC 2 cut(s) 2468, 2886
BsmI GAATGC 2 cut(s) 283, 3400
BsnI GGCC 6 cut(s) 255, 698, 1185, 1211, 1897, 3241
Bso31I GGTCTC 1 cut(s) 147
BsoBI CYCGRG 3 cut(s) 611, 630, 3250
Bsp119I TTCGAA 4 cut(s) 1918, 2108, 2210, 2365
Bsp1286I GDGCHC 4 cut(s) 980, 1052, 1124, 3279
Bsp13I TCCGGA 1 cut(s) 3223
Bsp1407I TGTACA 2 cut(s) 2086, 2716
BspACI CCGC 9 cut(s) 219, 302, 1461, 1605, 1677, 1785, 2735, 2753, 2793
BspANI GGCC 6 cut(s) 255, 698, 1185, 1211, 1897, 3241
BspCNI CTCAG 6 cut(s) 33, 681, 1237, 1393, 1721, 3094
BspDI ATCGAT 2 cut(s) 1669, 3087
BspEI TCCGGA 1 cut(s) 3223
BspFNI CGCG 1 cut(s) 2795
BspLI GGNNCC 3 cut(s) 113, 656, 1848
BspMAI CTGCAG 1 cut(s) 2785
BspMI ACCTGC 2 cut(s) 183, 2788
BspOI GCTAGC 1 cut(s) 1661
BspPI GGATC 5 cut(s) 1175, 2169, 2485, 3215, 3260
BspT104I TTCGAA 4 cut(s) 1918, 2108, 2210, 2365
BspT107I GGYRCC 1 cut(s) 111
BspTI CTTAAG 2 cut(s) 308, 520
BspTNI GGTCTC 1 cut(s) 147
BsrDI GCAATG 3 cut(s) 1212, 2326, 3262
BsrFI RCCGGY 2 cut(s) 479, 1661
BsrGI TGTACA 2 cut(s) 2086, 2716
BsrI ACTGG 4 cut(s) 256, 1916, 3053, 3148
BssAI RCCGGY 2 cut(s) 479, 1661
BssECI CCNNGG 4 cut(s) 79, 317, 1206, 1999
BssT1I CCWWGG 2 cut(s) 1206, 1999
Bst2UI CCWGG 1 cut(s) 158
Bst4CI ACNGT 9 cut(s) 215, 733, 1239, 1716, 1782, 2133, 2432, 2568, 3236
Bst6I CTCTTC 4 cut(s) 187, 837, 1006, 1078
BstAFI CTTAAG 2 cut(s) 308, 520
BstAPI GCANNNNNTGC 1 cut(s) 140
BstAUI TGTACA 2 cut(s) 2086, 2716
BstBI TTCGAA 4 cut(s) 1918, 2108, 2210, 2365
BstC8I GCNNGC 4 cut(s) 93, 409, 1659, 2558
BstDSI CCRYGG 1 cut(s) 317
BstEII GGTNACC 2 cut(s) 83, 506
BstFNI CGCG 1 cut(s) 2795
BstH2I RGCGCY 2 cut(s) 425, 500
BstHHI GCGC 2 cut(s) 424, 499
BstMAI GTCTC 8 cut(s) 147, 204, 2000, 2275, 2454, 2645, 3253, 3343
BstMCI CGRYCG 2 cut(s) 3091, 3238
BstMWI GCNNNNNNNGC 4 cut(s) 55, 140, 2252, 3283
BstNI CCWGG 1 cut(s) 158
BstNSI RCATGY 2 cut(s) 29, 95
BstPI GGTNACC 2 cut(s) 83, 506
BstSCI CCNGG 3 cut(s) 156, 1319, 2330
BstSFI CTRYAG 5 cut(s) 636, 775, 1586, 2256, 2781
BstUI CGCG 1 cut(s) 2795
BstV1I GCAGC 3 cut(s) 376, 495, 2191
BstV2I GAAGAC 2 cut(s) 773, 1413
BstX2I RGATCY 6 cut(s) 457, 532, 1167, 1438, 2161, 3265
BstXI CCANNNNNNTGG 3 cut(s) 944, 1016, 2277
BstYI RGATCY 6 cut(s) 457, 532, 1167, 1438, 2161, 3265
Bsu15I ATCGAT 2 cut(s) 1669, 3087
BsuI GTATCC 1 cut(s) 324
BsuRI GGCC 6 cut(s) 255, 698, 1185, 1211, 1897, 3241
BsuTUI ATCGAT 2 cut(s) 1669, 3087
BtgI CCRYGG 1 cut(s) 317
BtgZI GCGATG 1 cut(s) 2810
BtsI GCAGTG 1 cut(s) 235
BtsIMutI CAGTG 1 cut(s) 235
BveI ACCTGC 2 cut(s) 183, 2788
Cac8I GCNNGC 4 cut(s) 93, 409, 1659, 2558
CaiI CAGNNNCTG 1 cut(s) 2486
CfoI GCGC 2 cut(s) 424, 499
Cfr10I RCCGGY 2 cut(s) 479, 1661
Cfr13I GGNCC 5 cut(s) 382, 696, 1895, 2123, 3106
ClaI ATCGAT 2 cut(s) 1669, 3087
CseI GACGC 1 cut(s) 2397
CsiI ACCWGGT 1 cut(s) 156
Csp6I GTAC 6 cut(s) 543, 1272, 1685, 2087, 2717, 3147
CviQI GTAC 6 cut(s) 543, 1272, 1685, 2087, 2717, 3147
DraI TTTAAA 2 cut(s) 675, 2580
EaeI YGGCCR 4 cut(s) 253, 1183, 1209, 3239
Eam1104I CTCTTC 4 cut(s) 187, 837, 1006, 1078
EarI CTCTTC 4 cut(s) 187, 837, 1006, 1078
Ecl136II GAGCTC 4 cut(s) 978, 1050, 1122, 3277
Eco130I CCWWGG 2 cut(s) 1206, 1999
Eco24I GRGCYC 4 cut(s) 980, 1052, 1124, 3279
Eco31I GGTCTC 1 cut(s) 147
Eco32I GATATC 2 cut(s) 527, 2023
Eco47I GGWCC 3 cut(s) 382, 2123, 3106
Eco47III AGCGCT 2 cut(s) 423, 498
Eco53kI GAGCTC 4 cut(s) 978, 1050, 1122, 3277
Eco88I CYCGRG 3 cut(s) 611, 630, 3250
Eco91I GGTNACC 2 cut(s) 83, 506
EcoICRI GAGCTC 4 cut(s) 978, 1050, 1122, 3277
EcoO65I GGTNACC 2 cut(s) 83, 506
EcoRI GAATTC 2 cut(s) 1738, 2191
EcoRII CCWGG 1 cut(s) 156
EcoRV GATATC 2 cut(s) 527, 2023
EcoT14I CCWWGG 2 cut(s) 1206, 1999
EcoT22I ATGCAT 1 cut(s) 3379
EcoT38I GRGCYC 4 cut(s) 980, 1052, 1124, 3279
ErhI CCWWGG 2 cut(s) 1206, 1999
FalI AAGNNNNNCTT 2 cut(s) 697, 729
FaqI GGGAC 2 cut(s) 2468, 2886
FauI CCCGC 3 cut(s) 309, 1670, 2800
FbaI TGATCA 1 cut(s) 3432
Fnu4HI GCNGC 3 cut(s) 365, 484, 2205
FriOI GRGCYC 4 cut(s) 980, 1052, 1124, 3279
Fsp4HI GCNGC 3 cut(s) 365, 484, 2205
FspBI CTAG 7 cut(s) 116, 530, 1514, 1658, 2297, 2679, 3305
GlaI GCGC 2 cut(s) 423, 498
GluI GCNGC 3 cut(s) 365, 484, 2205
GsaI CCCAGC 1 cut(s) 3290
GsuI CTGGAG 1 cut(s) 2011
HaeII RGCGCY 2 cut(s) 425, 500
HaeIII GGCC 6 cut(s) 255, 698, 1185, 1211, 1897, 3241
HapII CCGG 8 cut(s) 480, 1320, 1472, 1544, 1616, 1662, 2331, 3224
HgaI GACGC 1 cut(s) 2397
HhaI GCGC 2 cut(s) 424, 499
Hin6I GCGC 2 cut(s) 422, 497
HinP1I GCGC 2 cut(s) 422, 497
HindIII AAGCTT 1 cut(s) 2468
HpaII CCGG 8 cut(s) 480, 1320, 1472, 1544, 1616, 1662, 2331, 3224
HphI GGTGA 6 cut(s) 77, 236, 347, 469, 569, 3143
Hpy166II GTNNAC 4 cut(s) 235, 736, 801, 2087
Hpy8I GTNNAC 4 cut(s) 235, 736, 801, 2087
HpyAV CCTTC 9 cut(s) 6, 1154, 1351, 1742, 2424, 2839, 3006, 3221, 3415
HpyCH4III ACNGT 9 cut(s) 215, 733, 1239, 1716, 1782, 2133, 2432, 2568, 3236
HpyCH4IV ACGT 2 cut(s) 99, 1830
HpyF10VI GCNNNNNNNGC 4 cut(s) 55, 140, 2252, 3283
HpySE526I ACGT 2 cut(s) 99, 1830
HspAI GCGC 2 cut(s) 422, 497
Kpn2I TCCGGA 1 cut(s) 3223
Ksp22I TGATCA 1 cut(s) 3432
LmnI GCTCC 4 cut(s) 660, 747, 2553, 3345
Lsp1109I GCAGC 3 cut(s) 376, 495, 2191
LweI GCATC 3 cut(s) 121, 2137, 2812
MabI ACCWGGT 1 cut(s) 156
MaeI CTAG 7 cut(s) 116, 530, 1514, 1658, 2297, 2679, 3305
MaeII ACGT 2 cut(s) 99, 1830
MaeIII GTNAC 6 cut(s) 83, 100, 506, 1088, 1429, 2071
MfeI CAATTG 2 cut(s) 649, 1859
MflI RGATCY 6 cut(s) 457, 532, 1167, 1438, 2161, 3265
MhlI GDGCHC 4 cut(s) 980, 1052, 1124, 3279
MlsI TGGCCA 3 cut(s) 255, 1185, 1211
MluNI TGGCCA 3 cut(s) 255, 1185, 1211
MlyI GAGTC 3 cut(s) 240, 2002, 3345
Mox20I TGGCCA 3 cut(s) 255, 1185, 1211
Mph1103I ATGCAT 1 cut(s) 3379
MroI TCCGGA 1 cut(s) 3223
MroXI GAANNNNTTC 2 cut(s) 1395, 2114
MscI TGGCCA 3 cut(s) 255, 1185, 1211
MslI CAYNNNNRTG 3 cut(s) 30, 90, 276
Msp20I TGGCCA 3 cut(s) 255, 1185, 1211
MspCI CTTAAG 2 cut(s) 308, 520
MspI CCGG 8 cut(s) 480, 1320, 1472, 1544, 1616, 1662, 2331, 3224
MspR9I CCNGG 3 cut(s) 158, 1321, 2332
MunI CAATTG 2 cut(s) 649, 1859
Mva1269I GAATGC 2 cut(s) 283, 3400
MvaI CCWGG 1 cut(s) 158
MvnI CGCG 1 cut(s) 2795
MwoI GCNNNNNNNGC 4 cut(s) 55, 140, 2252, 3283
NciI CCSGG 2 cut(s) 1321, 2332
NheI GCTAGC 1 cut(s) 1657
NlaIV GGNNCC 3 cut(s) 113, 656, 1848
NmuCI GTSAC 4 cut(s) 83, 100, 1088, 1429
NsiI ATGCAT 1 cut(s) 3379
NspI RCATGY 2 cut(s) 29, 95
NspV TTCGAA 4 cut(s) 1918, 2108, 2210, 2365
PaeI GCATGC 1 cut(s) 95
PaeR7I CTCGAG 1 cut(s) 3250
PaqCI CACCTGC 1 cut(s) 2788
PcsI WCGNNNNNNNCGW 1 cut(s) 618
PctI GAATGC 2 cut(s) 283, 3400
PdmI GAANNNNTTC 2 cut(s) 1395, 2114
PfeI GAWTC 8 cut(s) 952, 1024, 1096, 1297, 1726, 2110, 3026, 3064
PfoI TCCNGGA 1 cut(s) 2330
PkrI GCNGC 3 cut(s) 366, 485, 2206
Ple19I CGATCG 1 cut(s) 3091
PleI GAGTC 3 cut(s) 239, 2001, 3344
PpsI GAGTC 3 cut(s) 239, 2001, 3344
Psp124BI GAGCTC 4 cut(s) 980, 1052, 1124, 3279
Psp6I CCWGG 1 cut(s) 156
PspEI GGTNACC 2 cut(s) 83, 506
PspFI CCCAGC 1 cut(s) 3286
PspGI CCWGG 1 cut(s) 156
PspN4I GGNNCC 3 cut(s) 113, 656, 1848
PspPI GGNCC 5 cut(s) 382, 696, 1895, 2123, 3106
PsrI GAACNNNNNNTAC 2 cut(s) 2079, 2111
PstI CTGCAG 1 cut(s) 2785
PstNI CAGNNNCTG 1 cut(s) 2486
PsuI RGATCY 6 cut(s) 457, 532, 1167, 1438, 2161, 3265
PvuI CGATCG 1 cut(s) 3091
RsaI GTAC 6 cut(s) 544, 1273, 1686, 2088, 2718, 3148
RsaNI GTAC 6 cut(s) 543, 1272, 1685, 2087, 2717, 3147
RseI CAYNNNNRTG 3 cut(s) 30, 90, 276
SacI GAGCTC 4 cut(s) 980, 1052, 1124, 3279
SatI GCNGC 3 cut(s) 365, 484, 2205
Sau96I GGNCC 5 cut(s) 382, 696, 1895, 2123, 3106
SchI GAGTC 3 cut(s) 240, 2002, 3345
ScrFI CCNGG 3 cut(s) 158, 1321, 2332
SduI GDGCHC 4 cut(s) 980, 1052, 1124, 3279
SexAI ACCWGGT 1 cut(s) 156
SfaNI GCATC 3 cut(s) 121, 2137, 2812
SfcI CTRYAG 5 cut(s) 636, 775, 1586, 2256, 2781
Sfr274I CTCGAG 1 cut(s) 3250
SfuI TTCGAA 4 cut(s) 1918, 2108, 2210, 2365
SinI GGWCC 3 cut(s) 382, 2123, 3106
SlaI CTCGAG 1 cut(s) 3250
SmiMI CAYNNNNRTG 3 cut(s) 30, 90, 276
SmlI CTYRAG 7 cut(s) 308, 520, 550, 766, 2664, 2896, 3250
SmoI CTYRAG 7 cut(s) 308, 520, 550, 766, 2664, 2896, 3250
SphI GCATGC 1 cut(s) 95
SsiI CCGC 9 cut(s) 219, 302, 1461, 1605, 1677, 1785, 2735, 2753, 2793
SspI AATATT 2 cut(s) 377, 1650
SspMI CTAG 7 cut(s) 116, 530, 1514, 1658, 2297, 2679, 3305
SstI GAGCTC 4 cut(s) 980, 1052, 1124, 3279
StyD4I CCNGG 3 cut(s) 156, 1319, 2330
StyI CCWWGG 2 cut(s) 1206, 1999
TaaI ACNGT 9 cut(s) 215, 733, 1239, 1716, 1782, 2133, 2432, 2568, 3236
TaiI ACGT 2 cut(s) 102, 1833
TaqII GACCGA 1 cut(s) 71
TatI WGTACW 3 cut(s) 1271, 2086, 2716
TfiI GAWTC 8 cut(s) 952, 1024, 1096, 1297, 1726, 2110, 3026, 3064
TscAI CASTG 1 cut(s) 242
TseFI GTSAC 4 cut(s) 83, 100, 1088, 1429
TseI GCWGC 3 cut(s) 364, 483, 2204
Tsp45I GTSAC 4 cut(s) 83, 100, 1088, 1429
TspGWI ACGGA 1 cut(s) 306
TspRI CASTG 1 cut(s) 242
Vha464I CTTAAG 2 cut(s) 308, 520
VpaK11BI GGWCC 3 cut(s) 382, 2123, 3106
XbaI TCTAGA 3 cut(s) 529, 1513, 2296
XceI RCATGY 2 cut(s) 29, 95
XcmI CCANNNNNNNNNTGG 1 cut(s) 1986
XhoI CTCGAG 1 cut(s) 3250
XmnI GAANNNNTTC 2 cut(s) 1395, 2114
XspI CTAG 7 cut(s) 116, 530, 1514, 1658, 2297, 2679, 3305
Zsp2I ATGCAT 1 cut(s) 3379
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.