Rw4G015050

Leucine Rich repeat

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr4
Physical Location & Seq
Forward (+)
34627990 .. 34630914
2925 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw4G015050.1

Sequence Viewer

Length: 2925 bp
ATGAGTGGTGGGTCTATGCATTCTGGTTTGGTTGGGCTTGTGTGCCTGGCCATTGCCTCTGTTATTTGTTGTTCAAGTAGTGTTGGAAGCTCCAGCAACATCATGTGCTTGGAGAGTGAAAGGCATGCTCTTCTACAGTTCAAACAAGGCCTTGTGGATGAGTCCAATGCTCTTGCTTCTTGGAAAAGTGAGAAAGATTGCTGCAAGTGGAGAGGAATAGCATGCAACAACCAAACAGGTCATGTCACCCGTCTTGATTTCTCCTTTGATTATGATCCATATCTCAATTCTAATAAAGTTCCTTTAAGAGGTGAAATCAGTCCTTCACTACTTGAATTGCCATTTCTAAATTACTTGGACCTCAGTTATAATGATTTTGAAGGAACTATGATTCCCAAGTTCATTGGCTCTTTGAGTCAATTGAAAGAACTCAAACTTGTAAATGCTAATTTCAGGGGACCTGTTCCTCCCCAACTTGGAAACCTCTCTAATTTGCACACTCTTGAACTTTACGGTAACCAAATTAGCCCTGAAAATCTTGAGTGGTTATCTCATCTTTCTTCCTTGAGATACCTGAACATGACAGGGTTGAATTTGTCTGAGGCTGTGAATTGGCCAGAATCTTTGAGCAAGCTCACTTTTCTGACAGAGCTTCAGTTATCTGACTGTAACCTTCCTAATGTCAATCTAAAATCACTTTCCTTTATTAATTCTTCCACCTCTCTTCAACTCCTTGACCTCTCTTCTAACTCTCTTAATTCTTCAATATTTTATTGGATAGCCAATGTCAGCAGCAACTTTGAACATATTCATCTCTCCTCCAACAATCTTGAAGGTCCCATCCCAAATGTCTTCACAAGCATGCTTTCTCTAGTAACACTAGATCTGTCTCAGAATCAACTTGAAGGTGGGATATCAAAAGGCCTTCAAAACTCATGCAGCTTAGCGTCGTTGACCTTATCGTCAAACCAATTGTCTGAAAACATTGAGGACTCTGTTAGAACCTTGTCTTGTGCTGAGAACACACTTGACACCTTGGGCTTGAGGGATAACCAGTTTTGGGGGTCGTTGCCGGATTTAAAACGTTTTTCAAAGTTAAGAGTGTTAGATCTTAACAACAATCAAGTAAATGGGTCTGTACCCGAGAGTGTCGGGCAACTCTCATGCCTTGAAGAGCTATCTCTCTTCAATAATTCTATGAGTGGTGTCATAACAGAAGCCCACTTTTTGAACCTCTCTCGTTTACAAACTTTAGTTCTTAGCTGGAATCAAATAAATGGGTCTCTACCCGAGAGTGTCGGGCAACTCTCTAGCCTTGGAAAATTAGATCTCTCCGGGAATTCTTTGAGTGGTGTCATAACAGAAGCCCACTTTTTGAACCTCTCTCGTTTACAATATCTGGACGTTTCTAATAACCAGTTCTCTATCAACCTTAGCTCTGATTGGAATCCACCATTTCAGCTTTATGGGTTAGATATGTCCTCTTGCAACGTGGGCCCAGGTTTTCCCAAGTGGATTCTAACGCAGACAAATCTTCCCGATCTTTTTCTCTCTAATGCTGGACTATCAGGATCATTACCTAATAAGTTTTGGGATCTATTTTCTGGCTTGGAAAGGTTAGATCTCTCTATGAACCAAATCCATGGGAAACTGCCGAATCTGTCATCGACAAACTGGTATTTGGTTGACTTGTCTTCTAATCTACTTTCTGGTGCAGTGCCATCATTTTCTCATTTGCTTGGGAAGTTGTATCTCTCGAATAACATGTTTTCTGAGCCGTTGTCTTCCTTCTGTGCAACGCAGTCTACGGATTTATGGTATGTTGACATTTCTCAGAACCTATTGTCTGGGGAGCTTCCTAATTGTTGGATGCAATTTCAAGAATTGGATGTGTTGAATTTGGGAAAGAATAAATTATCTGGAAAAATACCACGCTGGTTAGGCAATCTACAGTCAATTGCGTTTTTGCGTTTAAATGATAACAACTTTTCAGGAGAATTGCCTTCTTTAGAGAACTGTACCGGATTATTGGTTGTTGACCTTGGCAACAATAACCTGTCGGGAAAGATACCAACATGGATTGGCCAAAGCCAACAAAACTTGTGGATTCTACGCTTGCGGTCCAATGAGTTCAATGGAATCATACCCTTCTCCCTGTGCGCTCTAGCTGCCATTCATGTATTGGACCTCTCTCACAACAATATTTCCGGAGGCTTGCCGCATTGCTTCAATAACATCAGCCAAAGCGCTAATGATGTTATCAATCCGGAAATTAATTTCGACCTCGTGTGGAAGGGAGTAGAGATCGAGTTTGGGGAAAATCTTGTTGGTATGAGAAGCATTGACATGTCAAGCAACTGTTTGATGGGGGAAATTCCGCAAAGTATAGCAAATATGACAGAGTTGAAATCACTGAATCTGTCAAGAAACTATTTGACAGGAAAGCTTCCCGAAAACTTTGGTAACATGAAGATGTTGGAATCTCTTGATTTGTCAAGAAACCAGATATCTGGTAAAATTCCTACAAGTTTTGCGAGCTTACACTTTCTTAGTTTCTTGGACTTATCATACAACAACTTGTCAGGAAGAATTCCACTTGGAACTCAACTTCAAAGTTTTAATGCTTCTCAATATATGGGAAATCTTGGACTTTGTGGACCACCGCTGACACCAAATTGCTCACGAGATGGAGAAACTCAAGCTGATGATAACAAAGAACATGATAATGATGGTCTCATAAGCCTAGGATTTTTTATCAGTGCTGTGCTGGGATTCGTCACTGGATTTTGGATGGTCTGCGGCAGTTTACTGCTTAAGACTTCTTGGAGATATGCGTATTTCAGATTCCTGGACAATGCAAAAGATTGGATTTATGTCAAAACCGCTGTGTATAGGGCAAAAGTGCAAAGGAGACTTCGAAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

974

Amino Acids

107.73

Weight (kDa)

5.2

Isoelectric Point (pI)

40.45

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 38 - 76 9.1e-13 Leucine rich repeat N-terminal domain
LRR_14 PF23598 105 - 305 9.9e-11 Leucine-rich repeat region
LRR_14 PF23598 356 - 445 2e-08 Leucine-rich repeat region
LRR_14 PF23598 794 - 857 2.7e-06 Leucine-rich repeat region
LRR_8 PF13855 801 - 860 7.1e-11 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000028)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g45420 FvH4_4g14031 FvH4_5g20780 FvH4_6g28530 FvH4_7g14020 FvH4_7g14030 FvH4_7g14040 FvH4_7g14050 FvH4_7g14060 FvH4_7g14070 FvH4_7g14090 FvH4_7g14110 FvH4_7g14140 FvH4_7g14450
malus_domestica MD00G1189100.v1.1 MD01G1018600.v1.1 MD01G1053800.v1.1 MD01G1053900.v1.1 MD01G1054000.v1.1 MD01G1054100.v1.1 MD01G1056700.v1.1 MD01G1057000.v1.1 MD01G1057300.v1.1 MD01G1057400.v1.1 MD01G1061600.v1.1 MD01G1061800.v1.1 MD01G1061900.v1.1 MD01G1062000.v1.1 MD01G1062400.v1.1 MD01G1062500.v1.1 MD01G1063200.v1.1 MD01G1063300.v1.1 MD01G1063400.v1.1 MD01G1063700.v1.1 MD01G1063900.v1.1 MD01G1064200.v1.1 MD01G1064300.v1.1 MD01G1064400.v1.1 MD01G1064600.v1.1 MD01G1064700.v1.1 MD01G1181100.v1.1 MD01G1212300.v1.1 MD01G1212500.v1.1 MD01G1212600.v1.1 MD02G1271900.v1.1 MD07G1136500.v1.1 MD07G1139300.v1.1 MD07G1141200.v1.1 MD07G1144700.v1.1 MD08G1144200.v1.1 MD14G1186300.v1.1 MD14G1186500.v1.1 MD14G1186700.v1.1 MD14G1186800.v1.1 MD15G1351300.v1.1 MD15G1439500.v1.1
prunus_persica Prupe.1G067000_v2.0.a1 Prupe.2G077400_v2.0.a1 Prupe.2G077700_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078600_v2.0.a1 Prupe.2G078800_v2.0.a1 Prupe.2G099600_v2.0.a1 Prupe.2G099700_v2.0.a1 Prupe.2G155100_v2.0.a1 Prupe.2G155500_v2.0.a1 Prupe.2G155600_v2.0.a1 Prupe.2G155800_v2.0.a1 Prupe.2G155900_v2.0.a1 Prupe.2G156100_v2.0.a1 Prupe.2G166100_v2.0.a1 Prupe.2G166300_v2.0.a1 Prupe.2G167500_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G168400_v2.0.a1 Prupe.2G168700_v2.0.a1 Prupe.2G168800_v2.0.a1 Prupe.2G169000_v2.0.a1 Prupe.2G169100_v2.0.a1 Prupe.2G169200_v2.0.a1 Prupe.2G169500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G172300_v2.0.a1 Prupe.2G304800_v2.0.a1 Prupe.4G264800_v2.0.a1 Prupe.4G265000_v2.0.a1 Prupe.5G051900_v2.0.a1 Prupe.5G052000_v2.0.a1
pyrus_communis pycom01g08380 pycom01g08430 pycom01g08490 pycom01g08520 pycom01g08540 pycom01g08550 pycom01g08600 pycom01g08630 pycom01g08660 pycom01g08720 pycom01g09180 pycom01g09200 pycom01g09210 pycom01g09270 pycom01g09280 pycom01g09300 pycom01g09380 pycom01g19110 pycom01g22260 pycom01g22310 pycom01g22330 pycom01g22350 pycom01g22360 pycom02g23250 pycom07g13420 pycom07g13670 pycom07g13900 pycom07g13910 pycom07g13960 pycom07g13970 pycom07g25680 pycom11g22830
rosa_chinensis RchiOBHm_Chr0c22g0500431 RchiOBHm_Chr0c22g0500441 RchiOBHm_Chr0c22g0500561 RchiOBHm_Chr0c22g0500571 RchiOBHm_Chr0c22g0500611 RchiOBHm_Chr0c22g0500621 RchiOBHm_Chr0c22g0500631 RchiOBHm_Chr0c22g0500681 RchiOBHm_Chr1g0348221 RchiOBHm_Chr1g0348251 RchiOBHm_Chr1g0352861 RchiOBHm_Chr1g0352871 RchiOBHm_Chr1g0352891 RchiOBHm_Chr1g0352901 RchiOBHm_Chr1g0354671 RchiOBHm_Chr1g0354701 RchiOBHm_Chr1g0354711 RchiOBHm_Chr1g0354751 RchiOBHm_Chr1g0354761 RchiOBHm_Chr1g0354841 RchiOBHm_Chr1g0354851 RchiOBHm_Chr1g0354881 RchiOBHm_Chr1g0354971 RchiOBHm_Chr1g0354981 RchiOBHm_Chr1g0354991 RchiOBHm_Chr1g0355001 RchiOBHm_Chr1g0355011 RchiOBHm_Chr1g0355021 RchiOBHm_Chr1g0355861 RchiOBHm_Chr1g0379671 RchiOBHm_Chr1g0379681 RchiOBHm_Chr2g0096591 RchiOBHm_Chr2g0132821 RchiOBHm_Chr3g0454901 RchiOBHm_Chr3g0472711 RchiOBHm_Chr4g0400791 RchiOBHm_Chr5g0069481 RchiOBHm_Chr5g0069511 RchiOBHm_Chr5g0069551 RchiOBHm_Chr6g0254651 RchiOBHm_Chr6g0259721 RchiOBHm_Chr7g0205911 RchiOBHm_Chr7g0206401 RchiOBHm_Chr7g0206571 RchiOBHm_Chr7g0206581 RchiOBHm_Chr7g0206621 RchiOBHm_Chr7g0206631 RchiOBHm_Chr7g0206641 RchiOBHm_Chr7g0206681 RchiOBHm_Chr7g0206691 RchiOBHm_Chr7g0206751 RchiOBHm_Chr7g0206761 RchiOBHm_Chr7g0206851 RchiOBHm_Chr7g0206911 RchiOBHm_Chr7g0206921 RchiOBHm_Chr7g0207001 RchiOBHm_Chr7g0207011 RchiOBHm_Chr7g0207031 RchiOBHm_Chr7g0207101 RchiOBHm_Chr7g0207161 RchiOBHm_Chr7g0207201 RchiOBHm_Chr7g0207271 RchiOBHm_Chr7g0207301 RchiOBHm_Chr7g0207311 RchiOBHm_Chr7g0207421 RchiOBHm_Chr7g0207481 RchiOBHm_Chr7g0207491 RchiOBHm_Chr7g0207501 RchiOBHm_Chr7g0207521 RchiOBHm_Chr7g0207531 RchiOBHm_Chr7g0207561 RchiOBHm_Chr7g0207571 RchiOBHm_Chr7g0207581 RchiOBHm_Chr7g0207601 RchiOBHm_Chr7g0207621 RchiOBHm_Chr7g0207631 RchiOBHm_Chr7g0207651 RchiOBHm_Chr7g0207661 RchiOBHm_Chr7g0207711 RchiOBHm_Chr7g0207761 RchiOBHm_Chr7g0207801 RchiOBHm_Chr7g0208821 RchiOBHm_Chr7g0208831 RchiOBHm_Chr7g0208841 RchiOBHm_Chr7g0213601 RchiOBHm_Chr7g0215981 RchiOBHm_Chr7g0216021
rosa_laevigata RLG00000003193 RLG00000003194 RLG00000003287 RLG00000003288 RLG00000003289 RLG00000003293 RLG00000003294 RLG00000003295 RLG00000003297 RLG00000003299 RLG00000003301 RLG00000003327 RLG00000003347 RLG00000016653 RLG00000018642 RLG00000018643 RLG00000019285 RLG00000022542 RLG00000026368 RLG00000026371 RLG00000028124 RLG00000028125 RLG00000028183 RLG00000028184 RLG00000028185 RLG00000028188 RLG00000028673 RLG00000029267 RLG00000029325 RLG00000029674 RLG00000032883 RLG00000036055 RLG00000036058 RLG00000036065 RLG00000036068 RLG00000036071 RLG00000036072 RLG00000036075 RLG00000036076
rosa_multiflora Rmu_co8250183.1_g000001 Rmu_co8271981.1_g000001 Rmu_co8410829.1_g000001 Rmu_co8432879.1_g000001 Rmu_co8441941.1_g000001 Rmu_sc0000076.1_g000031 Rmu_sc0000738.1_g000038 Rmu_sc0000848.1_g000003 Rmu_sc0000848.1_g000014 Rmu_sc0000848.1_g000015 Rmu_sc0000848.1_g000016 Rmu_sc0001264.1_g000001 Rmu_sc0002284.1_g000018 Rmu_sc0002356.1_g000011 Rmu_sc0003020.1_g000003 Rmu_sc0003115.1_g000001 Rmu_sc0003115.1_g000002 Rmu_sc0003115.1_g000003 Rmu_sc0003115.1_g000004 Rmu_sc0003115.1_g000005 Rmu_sc0003115.1_g000008 Rmu_sc0003115.1_g000010 Rmu_sc0003115.1_g000011 Rmu_sc0003115.1_g000014 Rmu_sc0003565.1_g000002 Rmu_sc0003652.1_g000013 Rmu_sc0003652.1_g000015 Rmu_sc0003652.1_g000016 Rmu_sc0003652.1_g000019 Rmu_sc0003940.1_g000001 Rmu_sc0003940.1_g000004 Rmu_sc0003940.1_g000009 Rmu_sc0004084.1_g000010 Rmu_sc0004705.1_g000021 Rmu_sc0004972.1_g000007 Rmu_sc0004987.1_g000002 Rmu_sc0004987.1_g000006 Rmu_sc0005065.1_g000018 Rmu_sc0005065.1_g000029 Rmu_sc0005391.1_g000002 Rmu_sc0005633.1_g000003 Rmu_sc0005633.1_g000008 Rmu_sc0006632.1_g000014 Rmu_sc0006632.1_g000018 Rmu_sc0006681.1_g000010 Rmu_sc0006681.1_g000011 Rmu_sc0006733.1_g000003 Rmu_sc0007385.1_g000005 Rmu_sc0007385.1_g000007 Rmu_sc0007385.1_g000009 Rmu_sc0007385.1_g000016 Rmu_sc0007645.1_g000002 Rmu_sc0007645.1_g000003 Rmu_sc0007645.1_g000022 Rmu_sc0007828.1_g000008 Rmu_sc0008509.1_g000003 Rmu_sc0008509.1_g000015 Rmu_sc0008509.1_g000016 Rmu_sc0008509.1_g000020 Rmu_sc0008509.1_g000030 Rmu_sc0008509.1_g000041 Rmu_sc0008756.1_g000001 Rmu_sc0008756.1_g000003 Rmu_sc0013028.1_g000002 Rmu_sc0013028.1_g000003 Rmu_sc0013028.1_g000005 Rmu_sc0013160.1_g000001 Rmu_sc0014454.1_g000009 Rmu_sc0014455.1_g000007 Rmu_sc0014659.1_g000004 Rmu_sc0017798.1_g000002 Rmu_sc0017798.1_g000004 Rmu_sc0029608.1_g000001 Rmu_sc0037861.1_g000001 Rmu_sc0038750.1_g000001 Rmu_sc0042995.1_g000001 Rmu_ssc0000161.1_g000017
rosa_roxburghii Rroxscaffold_1G00009180 Rroxscaffold_1G00009190 Rroxscaffold_1G00011450 Rroxscaffold_1G00011480 Rroxscaffold_2G00111660 Rroxscaffold_2G00113570 Rroxscaffold_2G00122140 Rroxscaffold_3G00243730 Rroxscaffold_3G00245750 Rroxscaffold_3G00245760 Rroxscaffold_3G00250220 Rroxscaffold_3G00251160 Rroxscaffold_3G00251270 Rroxscaffold_3G00251280 Rroxscaffold_3G00251300 Rroxscaffold_3G00251340 Rroxscaffold_3G00251350 Rroxscaffold_3G00251390 Rroxscaffold_3G00251400 Rroxscaffold_3G00251560 Rroxscaffold_3G00251570 Rroxscaffold_3G00251870 Rroxscaffold_3G00252200 Rroxscaffold_3G00252210 Rroxscaffold_4G00279970 Rroxscaffold_4G00299970 Rroxscaffold_4G00300760 Rroxscaffold_4G00300780 Rroxscaffold_4G00300810 Rroxscaffold_4G00300850 Rroxscaffold_4G00307080 Rroxscaffold_4G00307100 Rroxscaffold_4G00313990 Rroxscaffold_6G00405080
rosa_rugosa Rorug01G0193600 Rorug01G0193700 Rorug01G0243800 Rorug01G0244000 Rorug01G0244000 Rorug01G0244400 Rorug01G0414300.1 Rorug01G0414500 Rorug01G0414600 Rorug02G0235600 Rorug02G0307900 Rorug02G0583100 Rorug02G0583200 Rorug02G0583300 Rorug05G0398000 Rorug05G0398100 Rorug05G0398200 Rorug05G0580300 Rorug05G0590300 Rorug06G0116000 Rorug06G0116100 Rorug07G0096800 Rorug07G0097100.1 Rorug07G0097200 Rorug07G0098600 Rorug07G0098600 Rorug07G0098700 Rorug07G0099100 Rorug07G0106100 Rorug07G0106200 Rorug07G0106200 Rorug07G0106300 Rorug07G0157600 Rorug07G0157700 Rorug07G0157700 Rorug07G0157800
rosa_samantha Rh1AG255500 Rh1AG256700 Rh1BG225800 Rh1BG226200 Rh1BG230000 Rh1CG195300 Rh1CG238400 Rh1CG238500 Rh1CG238900 Rh1CG239000 Rh1CG239300 Rh1CG239400 Rh1CG239800 Rh1CG240000 Rh1CG240200 Rh1CG240300 Rh1CG244300 Rh1CG406900 Rh1CG407300 Rh1CG407400 Rh2CG343600 Rh2DG383200 Rh3BG205900 Rh4AG404400 Rh4BG415500 Rh5AG455200 Rh5AG455600 Rh5CG497000 Rh5CG497200 Rh7AG228800 Rh7AG230400 Rh7AG230800 Rh7AG231200 Rh7AG231600 Rh7AG231800 Rh7AG232100 Rh7AG241600 Rh7BG236200 Rh7CG238200 Rh7CG239100 Rh7CG243400 Rh7CG244900
rosa_wichuraiana Rw0G023040 Rw1G017780 Rw1G022320 Rw1G022340 Rw1G022410 Rw1G022420 Rw1G022440 Rw1G022460 Rw1G022490 Rw1G022500 Rw1G022530 Rw1G022550 Rw1G022560 Rw1G022600 Rw1G023060 Rw1G038150 Rw1G038160 Rw2G008210 Rw2G022350 Rw2G029290 Rw4G015050 Rw4G019850 Rw5G024060 Rw5G042460 Rw7G019160 Rw7G019460 Rw7G019690 Rw7G019830 Rw7G019860 Rw7G019880 Rw7G019890 Rw7G019930 Rw7G019990 Rw7G020460 Rw7G025100 Rw7G025120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 369
AasI GACNNNNNNGTC 1 cut(s) 961
AccI GTMKAC 1 cut(s) 1805
AccIII TCCGGA 2 cut(s) 2207, 2266
AciI CCGC 6 cut(s) 2119, 2219, 2378, 2663, 2799, 2883
AclI AACGTT 1 cut(s) 1084
AclWI GGATC 3 cut(s) 269, 1579, 1602
AcoI YGGCCR 3 cut(s) 48, 614, 2083
AcsI RAATTY 6 cut(s) 592, 1339, 1897, 2373, 2517, 2589
AcuI CTGAAG 1 cut(s) 638
AfaI GTAC 2 cut(s) 1140, 2020
AfeI AGCGCT 1 cut(s) 2248
AfiI CCNNNNNNNGG 3 cut(s) 308, 476, 1060
AflII CTTAAG 1 cut(s) 2813
AflIII ACRYGT 2 cut(s) 1764, 2346
AjnI CCWGG 3 cut(s) 45, 1498, 2847
AjuI GAANNNNNNNTTGG 2 cut(s) 2310, 2342
AloI GAACNNNNNNTCC 2 cut(s) 376, 408
Alw26I GTCTC 4 cut(s) 894, 1287, 2738, 2905
AlwI GGATC 3 cut(s) 269, 1579, 1602
Ama87I CYCGRG 2 cut(s) 1142, 1289
Aor13HI TCCGGA 2 cut(s) 2207, 2266
Aor51HI AGCGCT 1 cut(s) 2248
AoxI GGCC 6 cut(s) 48, 148, 614, 922, 1495, 2083
ApaI GGGCCC 1 cut(s) 1499
ApeKI GCWGC 4 cut(s) 201, 792, 939, 2168
ApoI RAATTY 6 cut(s) 592, 1339, 1897, 2373, 2517, 2589
ArsI GACNNNNNNTTYG 2 cut(s) 959, 991
AseI ATTAAT 2 cut(s) 708, 2274
Asp700I GAANNNNTTC 1 cut(s) 807
AspA2I CCTAGG 1 cut(s) 2743
AspLEI GCGC 2 cut(s) 2162, 2249
AspS9I GGNCC 8 cut(s) 358, 458, 836, 1495, 1496, 2121, 2185, 2657
AsuC2I CCSGG 1 cut(s) 1336
AsuHPI GGTGA 2 cut(s) 238, 323
AsuII TTCGAA 1 cut(s) 2917
AvaI CYCGRG 2 cut(s) 1142, 1289
AvaII GGWCC 6 cut(s) 358, 458, 836, 2121, 2185, 2657
AvrII CCTAGG 1 cut(s) 2743
BaeGI GKGCMC 1 cut(s) 1499
BalI TGGCCA 3 cut(s) 50, 616, 2085
BanII GRGCYC 1 cut(s) 1499
BauI CACGAG 2 cut(s) 2285, 2682
BbsI GAAGAC 3 cut(s) 844, 1686, 1776
BbvI GCAGC 4 cut(s) 188, 804, 951, 2155
BccI CCATC 6 cut(s) 848, 1729, 2359, 2681, 2723, 2785
BceAI ACGGC 1 cut(s) 1762
BciT130I CCWGG 3 cut(s) 47, 1500, 2849
BcnI CCSGG 1 cut(s) 1336
BcoDI GTCTC 4 cut(s) 894, 1287, 2738, 2905
BfaI CTAG 5 cut(s) 872, 881, 1311, 2165, 2744
BfmI CTRYAG 2 cut(s) 134, 1949
BfoI RGCGCY 1 cut(s) 2250
BfrI CTTAAG 1 cut(s) 2813
BglII AGATCT 4 cut(s) 883, 1108, 1327, 1621
BisI GCNGC 6 cut(s) 202, 793, 940, 2169, 2219, 2800
BlnI CCTAGG 1 cut(s) 2743
BlpI GCTNAGC 1 cut(s) 943
BlsI GCNGC 6 cut(s) 203, 794, 941, 2170, 2220, 2801
Bme1390I CCNGG 4 cut(s) 47, 1336, 1500, 2849
Bme18I GGWCC 6 cut(s) 358, 458, 836, 2121, 2185, 2657
BmeT110I CYCGRG 2 cut(s) 1142, 1289
BmgT120I GGNCC 8 cut(s) 358, 458, 836, 1495, 1496, 2121, 2185, 2657
BmiI GGNNCC 3 cut(s) 459, 838, 1497
BmrFI CCNGG 4 cut(s) 47, 1336, 1500, 2849
BmsI GCATC 1 cut(s) 1860
BpiI GAAGAC 3 cut(s) 844, 1686, 1776
BpmI CTGGAG 1 cut(s) 76
Bpu10I CCTNAGC 1 cut(s) 1433
Bpu1102I GCTNAGC 1 cut(s) 943
Bpu14I TTCGAA 1 cut(s) 2917
BpuEI CTTGAG 4 cut(s) 560, 586, 1063, 2682
BpuMI CCSGG 1 cut(s) 1336
BsaBI GATNNNNATC 3 cut(s) 273, 279, 1446
BsaI GGTCTC 2 cut(s) 1287, 2738
BsaJI CCNNGG 6 cut(s) 1035, 1315, 1498, 1642, 2041, 2743
BsaWI WCCGGW 3 cut(s) 2021, 2207, 2266
Bsc4I CCNNNNNNNGG 3 cut(s) 308, 476, 1060
Bse1I ACTGG 4 cut(s) 1054, 1417, 1679, 2785
Bse3DI GCAATG 2 cut(s) 51, 2221
Bse8I GATNNNNATC 3 cut(s) 273, 279, 1446
BseAI TCCGGA 2 cut(s) 2207, 2266
BseBI CCWGG 3 cut(s) 47, 1500, 2849
BseDI CCNNGG 6 cut(s) 1035, 1315, 1498, 1642, 2041, 2743
BseGI GGATG 5 cut(s) 163, 840, 1875, 1894, 2796
BseJI GATNNNNATC 3 cut(s) 273, 279, 1446
BseLI CCNNNNNNNGG 3 cut(s) 308, 476, 1060
BseMI GCAATG 2 cut(s) 51, 2221
BseMII CTCAG 6 cut(s) 376, 591, 905, 1008, 1764, 1847
BseNI ACTGG 4 cut(s) 1054, 1417, 1679, 2785
BseRI GAGGAG 1 cut(s) 808
BseSI GKGCMC 1 cut(s) 1499
BseXI GCAGC 4 cut(s) 188, 804, 951, 2155
BseYI CCCAGC 1 cut(s) 2767
BsgI GTGCAG 1 cut(s) 1734
BshFI GGCC 6 cut(s) 50, 150, 616, 924, 1497, 2085
BsiHKCI CYCGRG 2 cut(s) 1142, 1289
BsiSI CCGG 5 cut(s) 1073, 1335, 2022, 2208, 2267
BslFI GGGAC 2 cut(s) 471, 822
BslI CCNNNNNNNGG 3 cut(s) 308, 476, 1060
BsmAI GTCTC 4 cut(s) 894, 1287, 2738, 2905
BsmFI GGGAC 2 cut(s) 471, 822
BsmI GAATGC 1 cut(s) 19
BsnI GGCC 6 cut(s) 50, 150, 616, 924, 1497, 2085
Bso31I GGTCTC 2 cut(s) 1287, 2738
BsoBI CYCGRG 2 cut(s) 1142, 1289
Bsp119I TTCGAA 1 cut(s) 2917
Bsp120I GGGCCC 1 cut(s) 1495
Bsp1286I GDGCHC 1 cut(s) 1499
Bsp13I TCCGGA 2 cut(s) 2207, 2266
Bsp143I GATC 9 cut(s) 274, 883, 1108, 1327, 1540, 1571, 1594, 1621, 2304
Bsp1720I GCTNAGC 1 cut(s) 943
Bsp19I CCATGG 1 cut(s) 1642
BspACI CCGC 6 cut(s) 2119, 2219, 2378, 2663, 2799, 2883
BspANI GGCC 6 cut(s) 50, 150, 616, 924, 1497, 2085
BspCNI CTCAG 6 cut(s) 375, 592, 904, 1009, 1765, 1846
BspEI TCCGGA 2 cut(s) 2207, 2266
BspLI GGNNCC 3 cut(s) 459, 838, 1497
BspPI GGATC 3 cut(s) 269, 1579, 1602
BspQI GCTCTTC 2 cut(s) 135, 1167
BspT104I TTCGAA 1 cut(s) 2917
BspTI CTTAAG 1 cut(s) 2813
BspTNI GGTCTC 2 cut(s) 1287, 2738
BsrDI GCAATG 2 cut(s) 51, 2221
BsrI ACTGG 4 cut(s) 1054, 1417, 1679, 2785
BssECI CCNNGG 6 cut(s) 1035, 1315, 1498, 1642, 2041, 2743
BssMI GATC 9 cut(s) 274, 883, 1108, 1327, 1540, 1571, 1594, 1621, 2304
BssSI CACGAG 2 cut(s) 2285, 2682
BssT1I CCWWGG 5 cut(s) 1035, 1315, 1642, 2041, 2743
Bst2BI CACGAG 2 cut(s) 2285, 2682
Bst2UI CCWGG 3 cut(s) 47, 1500, 2849
Bst4CI ACNGT 6 cut(s) 138, 515, 668, 1953, 2018, 2360
Bst6I CTCTTC 5 cut(s) 135, 729, 748, 1167, 1190
BstAFI CTTAAG 1 cut(s) 2813
BstBI TTCGAA 1 cut(s) 2917
BstC8I GCNNGC 7 cut(s) 126, 223, 632, 863, 2117, 2216, 2536
BstDSI CCRYGG 1 cut(s) 1642
BstEII GGTNACC 1 cut(s) 515
BstENI CCTNNNNNAGG 1 cut(s) 306
BstF5I GGATG 5 cut(s) 163, 840, 1875, 1894, 2796
BstH2I RGCGCY 1 cut(s) 2250
BstHHI GCGC 2 cut(s) 2162, 2249
BstKTI GATC 9 cut(s) 277, 886, 1111, 1330, 1543, 1574, 1597, 1624, 2307
BstMAI GTCTC 4 cut(s) 894, 1287, 2738, 2905
BstMBI GATC 9 cut(s) 274, 883, 1108, 1327, 1540, 1571, 1594, 1621, 2304
BstMWI GCNNNNNNNGC 3 cut(s) 1494, 1941, 2168
BstNI CCWGG 3 cut(s) 47, 1500, 2849
BstNSI RCATGY 5 cut(s) 128, 225, 865, 1768, 2350
BstPI GGTNACC 1 cut(s) 515
BstSCI CCNGG 4 cut(s) 45, 1334, 1498, 2847
BstSFI CTRYAG 2 cut(s) 134, 1949
BstSLI GKGCMC 1 cut(s) 1499
BstV1I GCAGC 4 cut(s) 188, 804, 951, 2155
BstV2I GAAGAC 3 cut(s) 844, 1686, 1776
BstX2I RGATCY 5 cut(s) 883, 1108, 1327, 1594, 1621
BstXI CCANNNNNNTGG 2 cut(s) 1643, 2510
BstYI RGATCY 5 cut(s) 883, 1108, 1327, 1594, 1621
BsuRI GGCC 6 cut(s) 50, 150, 616, 924, 1497, 2085
BtgI CCRYGG 1 cut(s) 1642
BtsCI GGATG 5 cut(s) 163, 840, 1875, 1894, 2796
BtsI GCAGTG 1 cut(s) 1722
BtsIMutI CAGTG 4 cut(s) 1722, 2411, 2764, 2778
Cac8I GCNNGC 7 cut(s) 126, 223, 632, 863, 2117, 2216, 2536
CfoI GCGC 2 cut(s) 2162, 2249
Cfr13I GGNCC 8 cut(s) 358, 458, 836, 1495, 1496, 2121, 2185, 2657
CseI GACGC 1 cut(s) 936
Csp6I GTAC 2 cut(s) 1139, 2019
CspCI CAANNNNNGTGG 2 cut(s) 2084, 2119
CviQI GTAC 2 cut(s) 1139, 2019
DpnI GATC 9 cut(s) 276, 885, 1110, 1329, 1542, 1573, 1596, 1623, 2306
DpnII GATC 9 cut(s) 274, 883, 1108, 1327, 1540, 1571, 1594, 1621, 2304
DraI TTTAAA 2 cut(s) 1080, 1974
DrdI GACNNNNNNGTC 1 cut(s) 961
DseDI GACNNNNNNGTC 1 cut(s) 961
EaeI YGGCCR 3 cut(s) 48, 614, 2083
Eam1104I CTCTTC 5 cut(s) 135, 729, 748, 1167, 1190
EarI CTCTTC 5 cut(s) 135, 729, 748, 1167, 1190
Eco130I CCWWGG 5 cut(s) 1035, 1315, 1642, 2041, 2743
Eco147I AGGCCT 2 cut(s) 150, 924
Eco24I GRGCYC 1 cut(s) 1499
Eco31I GGTCTC 2 cut(s) 1287, 2738
Eco32I GATATC 2 cut(s) 915, 2508
Eco47I GGWCC 6 cut(s) 358, 458, 836, 2121, 2185, 2657
Eco47III AGCGCT 1 cut(s) 2248
Eco57I CTGAAG 1 cut(s) 638
Eco88I CYCGRG 2 cut(s) 1142, 1289
Eco91I GGTNACC 1 cut(s) 515
EcoNI CCTNNNNNAGG 1 cut(s) 306
EcoO109I RGGNCCY 2 cut(s) 458, 836
EcoO65I GGTNACC 1 cut(s) 515
EcoRI GAATTC 2 cut(s) 1339, 2589
EcoRII CCWGG 3 cut(s) 45, 1498, 2847
EcoRV GATATC 2 cut(s) 915, 2508
EcoT14I CCWWGG 5 cut(s) 1035, 1315, 1642, 2041, 2743
EcoT22I ATGCAT 1 cut(s) 21
EcoT38I GRGCYC 1 cut(s) 1499
ErhI CCWWGG 5 cut(s) 1035, 1315, 1642, 2041, 2743
FaqI GGGAC 2 cut(s) 471, 822
FblI GTMKAC 1 cut(s) 1805
Fnu4HI GCNGC 6 cut(s) 202, 793, 940, 2169, 2219, 2800
FokI GGATG 5 cut(s) 170, 827, 1882, 1901, 2803
FriOI GRGCYC 1 cut(s) 1499
Fsp4HI GCNGC 6 cut(s) 202, 793, 940, 2169, 2219, 2800
FspBI CTAG 5 cut(s) 872, 881, 1311, 2165, 2744
GlaI GCGC 2 cut(s) 2161, 2248
GluI GCNGC 6 cut(s) 202, 793, 940, 2169, 2219, 2800
GsaI CCCAGC 1 cut(s) 2771
GsuI CTGGAG 1 cut(s) 76
HaeII RGCGCY 1 cut(s) 2250
HaeIII GGCC 6 cut(s) 50, 150, 616, 924, 1497, 2085
HapII CCGG 5 cut(s) 1073, 1335, 2022, 2208, 2267
HgaI GACGC 1 cut(s) 936
HhaI GCGC 2 cut(s) 2162, 2249
Hin6I GCGC 2 cut(s) 2160, 2247
HinP1I GCGC 2 cut(s) 2160, 2247
HincII GTYRAC 4 cut(s) 954, 1687, 1825, 2038
HindII GTYRAC 4 cut(s) 954, 1687, 1825, 2038
HindIII AAGCTT 1 cut(s) 2444
HpaII CCGG 5 cut(s) 1073, 1335, 2022, 2208, 2267
HphI GGTGA 2 cut(s) 238, 323
Hpy166II GTNNAC 9 cut(s) 954, 1244, 1391, 1687, 1806, 1825, 2038, 2657, 2807
Hpy188I TCNGA 9 cut(s) 601, 645, 664, 894, 979, 1441, 1774, 1836, 2843
Hpy8I GTNNAC 9 cut(s) 954, 1244, 1391, 1687, 1806, 1825, 2038, 2657, 2807
Hpy99I CGWCG 1 cut(s) 952
HpyCH4III ACNGT 6 cut(s) 138, 515, 668, 1953, 2018, 2360
HpyCH4IV ACGT 3 cut(s) 1084, 1404, 1491
HpyF10VI GCNNNNNNNGC 3 cut(s) 1494, 1941, 2168
HpySE526I ACGT 3 cut(s) 1084, 1404, 1491
HspAI GCGC 2 cut(s) 2160, 2247
Kpn2I TCCGGA 2 cut(s) 2207, 2266
Kzo9I GATC 9 cut(s) 274, 883, 1108, 1327, 1540, 1571, 1594, 1621, 2304
LguI GCTCTTC 2 cut(s) 135, 1167
LmnI GCTCC 2 cut(s) 95, 1852
Lsp1109I GCAGC 4 cut(s) 188, 804, 951, 2155
LweI GCATC 1 cut(s) 1860
MaeI CTAG 5 cut(s) 872, 881, 1311, 2165, 2744
MaeII ACGT 3 cut(s) 1084, 1404, 1491
MaeIII GTNAC 6 cut(s) 244, 515, 668, 874, 2462, 2776
MalI GATC 9 cut(s) 276, 885, 1110, 1329, 1542, 1573, 1596, 1623, 2306
MboI GATC 9 cut(s) 274, 883, 1108, 1327, 1540, 1571, 1594, 1621, 2304
MfeI CAATTG 3 cut(s) 419, 971, 1956
MflI RGATCY 5 cut(s) 883, 1108, 1327, 1594, 1621
MhlI GDGCHC 1 cut(s) 1499
MlsI TGGCCA 3 cut(s) 50, 616, 2085
MluNI TGGCCA 3 cut(s) 50, 616, 2085
MlyI GAGTC 3 cut(s) 170, 424, 986
MmeI TCCRAC 4 cut(s) 64, 846, 1847, 2457
Mox20I TGGCCA 3 cut(s) 50, 616, 2085
Mph1103I ATGCAT 1 cut(s) 21
MroI TCCGGA 2 cut(s) 2207, 2266
MroXI GAANNNNTTC 1 cut(s) 807
MscI TGGCCA 3 cut(s) 50, 616, 2085
MslI CAYNNNNRTG 4 cut(s) 860, 2345, 2471, 2724
Msp20I TGGCCA 3 cut(s) 50, 616, 2085
MspA1I CMGCKG 2 cut(s) 2665, 2885
MspCI CTTAAG 1 cut(s) 2813
MspI CCGG 5 cut(s) 1073, 1335, 2022, 2208, 2267
MspR9I CCNGG 4 cut(s) 47, 1336, 1500, 2849
MunI CAATTG 3 cut(s) 419, 971, 1956
Mva1269I GAATGC 1 cut(s) 19
MvaI CCWGG 3 cut(s) 47, 1500, 2849
MwoI GCNNNNNNNGC 3 cut(s) 1494, 1941, 2168
NciI CCSGG 1 cut(s) 1336
NcoI CCATGG 1 cut(s) 1642
NdeII GATC 9 cut(s) 274, 883, 1108, 1327, 1540, 1571, 1594, 1621, 2304
NlaIV GGNNCC 3 cut(s) 459, 838, 1497
NmuCI GTSAC 2 cut(s) 244, 2776
NsiI ATGCAT 1 cut(s) 21
NspI RCATGY 5 cut(s) 128, 225, 865, 1768, 2350
NspV TTCGAA 1 cut(s) 2917
PaeI GCATGC 3 cut(s) 128, 225, 865
PceI AGGCCT 2 cut(s) 150, 924
PciI ACATGT 2 cut(s) 1764, 2346
PciSI GCTCTTC 2 cut(s) 135, 1167
PctI GAATGC 1 cut(s) 19
PdmI GAANNNNTTC 1 cut(s) 807
PfoI TCCNGGA 2 cut(s) 1334, 2847
PkrI GCNGC 6 cut(s) 203, 794, 941, 2170, 2220, 2801
PleI GAGTC 3 cut(s) 169, 423, 986
PpsI GAGTC 3 cut(s) 169, 423, 986
PpuMI RGGWCCY 2 cut(s) 458, 836
PscI ACATGT 2 cut(s) 1764, 2346
PshBI ATTAAT 2 cut(s) 708, 2274
PsiI TTATAA 1 cut(s) 369
Psp1406I AACGTT 1 cut(s) 1084
Psp5II RGGWCCY 2 cut(s) 458, 836
Psp6I CCWGG 3 cut(s) 45, 1498, 2847
PspEI GGTNACC 1 cut(s) 515
PspFI CCCAGC 1 cut(s) 2767
PspGI CCWGG 3 cut(s) 45, 1498, 2847
PspN4I GGNNCC 3 cut(s) 459, 838, 1497
PspOMI GGGCCC 1 cut(s) 1495
PspPI GGNCC 8 cut(s) 358, 458, 836, 1495, 1496, 2121, 2185, 2657
PspPPI RGGWCCY 2 cut(s) 458, 836
PsuI RGATCY 5 cut(s) 883, 1108, 1327, 1594, 1621
RsaI GTAC 2 cut(s) 1140, 2020
RsaNI GTAC 2 cut(s) 1139, 2019
RseI CAYNNNNRTG 4 cut(s) 860, 2345, 2471, 2724
SapI GCTCTTC 2 cut(s) 135, 1167
SatI GCNGC 6 cut(s) 202, 793, 940, 2169, 2219, 2800
Sau3AI GATC 9 cut(s) 274, 883, 1108, 1327, 1540, 1571, 1594, 1621, 2304
Sau96I GGNCC 8 cut(s) 358, 458, 836, 1495, 1496, 2121, 2185, 2657
SchI GAGTC 3 cut(s) 170, 424, 986
ScrFI CCNGG 4 cut(s) 47, 1336, 1500, 2849
SduI GDGCHC 1 cut(s) 1499
SfaNI GCATC 1 cut(s) 1860
SfcI CTRYAG 2 cut(s) 134, 1949
SfuI TTCGAA 1 cut(s) 2917
SinI GGWCC 6 cut(s) 358, 458, 836, 2121, 2185, 2657
SmiMI CAYNNNNRTG 4 cut(s) 860, 2345, 2471, 2724
SmlI CTYRAG 5 cut(s) 539, 565, 1042, 2697, 2813
SmoI CTYRAG 5 cut(s) 539, 565, 1042, 2697, 2813
SphI GCATGC 3 cut(s) 128, 225, 865
SseBI AGGCCT 2 cut(s) 150, 924
SsiI CCGC 6 cut(s) 2119, 2219, 2378, 2663, 2799, 2883
SspI AATATT 2 cut(s) 768, 2203
SspMI CTAG 5 cut(s) 872, 881, 1311, 2165, 2744
StuI AGGCCT 2 cut(s) 150, 924
StyD4I CCNGG 4 cut(s) 45, 1334, 1498, 2847
StyI CCWWGG 5 cut(s) 1035, 1315, 1642, 2041, 2743
TaaI ACNGT 6 cut(s) 138, 515, 668, 1953, 2018, 2360
TaiI ACGT 3 cut(s) 1087, 1407, 1494
TaqI TCGA 5 cut(s) 1667, 1757, 2280, 2307, 2917
TauI GCSGC 2 cut(s) 2221, 2802
TscAI CASTG 4 cut(s) 1722, 2418, 2764, 2785
TseFI GTSAC 2 cut(s) 244, 2776
TseI GCWGC 4 cut(s) 201, 792, 939, 2168
Tsp45I GTSAC 2 cut(s) 244, 2776
TspDTI ATGAA 5 cut(s) 391, 800, 1646, 2165, 2483
TspGWI ACGGA 1 cut(s) 1823
TspRI CASTG 4 cut(s) 1722, 2418, 2764, 2785
Vha464I CTTAAG 1 cut(s) 2813
VpaK11BI GGWCC 6 cut(s) 358, 458, 836, 2121, 2185, 2657
VspI ATTAAT 2 cut(s) 708, 2274
XagI CCTNNNNNAGG 1 cut(s) 306
XapI RAATTY 6 cut(s) 592, 1339, 1897, 2373, 2517, 2589
XceI RCATGY 5 cut(s) 128, 225, 865, 1768, 2350
XcmI CCANNNNNNNNNTGG 1 cut(s) 2179
XmaJI CCTAGG 1 cut(s) 2743
XmiI GTMKAC 1 cut(s) 1805
XmnI GAANNNNTTC 1 cut(s) 807
XspI CTAG 5 cut(s) 872, 881, 1311, 2165, 2744
Zsp2I ATGCAT 1 cut(s) 21
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.