MD01G1062000.v1.1

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr01
Physical Location & Seq
Forward (+)
16613137 .. 16616734
3598 bp
Loading structure...
UTR
Exon/CDS
Intron
MD01G1062000.v1.1.491

Sequence Viewer

Length: 3357 bp
ATGGAGAACGACGGAATCAGGTGCTTGAAGAAATTCTTTCACACTTCCATTGTGGTGCTACTTTTTCTACAATGTTTCAACCCTTCCCTATCCTCTGGATTCTATAATGTTTCTTTGGGTTTCGGAGCAATTGGCCACCGGGTGGTGACGAGGTGCATAAAGAGTGAAGGGGAAGCACTCCTTTCTTTCAAACAAGGTCTGATTGATGACTACAATCTCCTCTCCTCCTGGGGAAGAGAAGAACACAAGCAAGATTGTTGCAAATGGCTTGGCATCCACTGCAGCAACCGAACCAACCATGTTACTCAACTTGATCTTGGATGGAATCATATGAATGAAGTTTACTCACTTCAACAGAAAGGACAGCAGGAGTATCCCGTATATTACTTTCAAGGTAAAATGATGAGTCCTAAACTAATTGAGTTGCAGCATTTGAAATATTTGGACCTTTCTTCCATTAACTTCACTGGGACCCAGCTTCCAGATTTCATTGGTTCTCTTTCCAATTTAAGACACCTCGATCTCTGGTATGCTTCTTTTGGTGGTCGAATTCCAACTCAGATTGGAAACCTTACTCACTTGCAATATCTTGATCTCAGATCCAATCACTTTGCTAATGTAGAAAATATCAATTCATGGCTACCTCATCTTTCTTCTTTAACATATTTGGACCTGAGTTACAACAATCTTAGTAATGTTCCTGACTGGTTGGAAATAGTTAGTAAGCTCCCTAAACTTACTAACTTGTCTCTGTCTTATTGTAGTCTTCCTTCTCTTCTAATTCATTCCAGTACTCTTTTTAACATAAATTCTTCTAAATCTCTTGCTCATGTTGATCTCAGTGATAACCAACTCACTTCTTCCATATTTCTTTGGTTGTCCAAATACAATGCCAGCCTTGTTCATCTTGATCTCAAATACAATAACTTTGCTAATGTAGAAAATCTGAATTCATGGCTGCCTCATCTTTCTGCTTTAACATATTTGGACCTAAGTTACAGCAATCTCAGTAATGTTCCTGACTGGATCGAAGCAGTTAATAATCTCCCTAAACTTACAAACTTGTCTCTGTCTTATTGCAGTCTTCCTTCTCCTCTAATTCATTCCAGTACTCTTTTTAACATAAATTCTTCTAAATCTCTTGCTCATGTTGATCTCAGTGACAACCAACTCACATCTTCTTCCACATTTCTTTGGTTGTCCAAATACAATGCCAGCCTTGTTCATCTTGATCTCAAATACAATAACTTTGCTAATGTAGAAAATCTGAATTCATGGCTGCCTCATCTTTCTGCTTTAACATATTTGGACCTGAGTTACAGCAATCTCAGTAATGTTCCTGACTGGATGGAAGCAGTTAATAAGCATCCTAAACTTACAAATTTGTCTCTGTCTAATTGTGGTCTTCCTTCTCCTCTAATTCATTCCAGTACTCTTTTTAACATAAATTCTTCTAAATCTCTTGCTCATGTTGATCTCAGTTACAACCAACTCACTTCTTCCATATTTCTTTGGTTGTCCAAATATAATTCCAGCCTTGTTCATCTTGACCTCTCTTACAACCAGTTAACTGGCTTATTTCCCGATGTCATTGGAAACATGAGCTCTCTTGCATATCTAGATCTCTCTTCTAACCAATTTAAAGGGGTGATTTCAGAAAGTCATTTCTCGGGTCTCTCCAGATTAAGATCTTTGTCTCTGTCCTCTACCTCACTAACTTTAAACTTCCATTCTAAATGGGTTCCTCCCTTCCAATTGGATGTCATATTCTTGAGGTCTTGCAAGATGGGTCCACATTTTCCAAATTGGCTTCAAACTCAGAAAAGTTATCGGACGCTTGATATTTCTAATGCTGGAATTTCTGATATCCTTCCAAGTTGGTTTTGGGAAAGGCTGTCTCATGCTCCTGAAATTGGTTATGTAGATCTCTCCAACAACCAAATTAGAGGAACAATTCCAAACTCGCAAATCAATTTTGTATGTTTCTCTCGTCAACTAAATTTGAGTTGGAACCAATTGGAAGGTCAAGTCCCTCCATTCCTATTGAAAGCTTCGTCATCTCTCTTTCTCTCCCACAATAAATTTTCAGGGTTGTTTTCTTTCTTGCTTCCAGTTAACGCAAGTCATTTAAGATTGCTTGATCTCTCGAGCAACCATTTACATGGAGAACTTCCCGATTGCTGGACTCATTTCAAAAATCTTTTAATTCTTGATTTGAGTGACAACCTTTTTTCTGGGAGAATTCCTGCCACAATGGGCTCTTTATCTTCAATTCAAACATTGAACCTAAACACTAATGGACTTGTGGGAGAATTGCCTTCATCTTTGAAGAACTGTACAAGTCTCATAGTTTTTGATGTTGGAGAAAATAAATTATCAGGTTTGATACCTGAATGGTTAGGGGTTGGACTTCCAAATTTGACTATCCTTATCCTCCGTTCTAATCACTTCTATGGAAGCATTCCATCACAATTGTGTAATATGGGAAGCATTCAAATTCTGGATTTCTCGATGAATAACATCTCCGGAAGTATACCCAAATGTCTCAACAATTTGACTAATTTGGCTCTAAGAGGAAGTTCAAGTCTAACTATCACTCACCTATTTAAGGCAACCTCCACTGATATTGCTGTCAGTATTTTTGATTATGAAGACGAAGCATCCTTGATATGGAATGGAATAATGTCCAAATACAAAAGTACCCTGGGGCTTGTAAAGAGTATCCATCTGTCAAGTAATCGATTAACGGGGGAGATTCCTAGTGAAGTCACTGATCTTGTGGGGCTGGTTTCTTTAAACCTATCAAGAAATAACTTAACAGGTCAAATAACTCCAAAAATAGGAAAGTTGCAGTCTTTAGATTTGCTTGATTTGTCAAACAACCAAATACATGGTACAATTCCAACAAGTCTCATTGGAATATCTGGCCTTGGTAAGTTGGACCTGTCCAACAACAACCTATCTGGAAAAATTCCCATCGGGTCTCAACTTCAACCCTATGACGCCACTGTTTTTGCTGGAAATCCTCTCCTTTGTGGAATTCCACTTGAACATATGTGCTCTCCTAAGGAAACAACACTGGAGGAGCAACCAGTGGTAGACAATCAAGATGAAGATGATGACGGGTTTATAACACCTGGATTTTACATGAGTTTGGGGCTTGGATTTATCATTGGATTCTGGGGAGTTTGTGGGAGTTTGATATTCAACAGGTCATGGAGATACATGTACTTCAAACTCTTGAATGGTTTAAATGATTGGCTTTATATCAAGCTCGTCCATCGGCTTGTGTGGTACGACATGCTAACCCCTTCGGCTTTTGGGTTGAGAAGGAGCCTGAAGGACAATAGCTTTTAA

Protein Analysis

1119

Amino Acids

125.08

Weight (kDa)

6.39

Isoelectric Point (pI)

37.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 54 - 95 3.7e-09 Leucine rich repeat N-terminal domain
LRR_14 PF23598 135 - 358 9.5e-16 Leucine-rich repeat region
LRR_8 PF13855 193 - 256 1.8e-07 Leucine rich repeat
LRR_8 PF13855 487 - 547 8.5e-09 Leucine rich repeat
LRR_8 PF13855 512 - 572 9.7e-12 Leucine rich repeat
LRR_8 PF13855 708 - 768 8.7e-06 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000028)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g45420 FvH4_4g14031 FvH4_5g20780 FvH4_6g28530 FvH4_7g14020 FvH4_7g14030 FvH4_7g14040 FvH4_7g14050 FvH4_7g14060 FvH4_7g14070 FvH4_7g14090 FvH4_7g14110 FvH4_7g14140 FvH4_7g14450
malus_domestica MD00G1189100.v1.1 MD01G1018600.v1.1 MD01G1053800.v1.1 MD01G1053900.v1.1 MD01G1054000.v1.1 MD01G1054100.v1.1 MD01G1056700.v1.1 MD01G1057000.v1.1 MD01G1057300.v1.1 MD01G1057400.v1.1 MD01G1061600.v1.1 MD01G1061800.v1.1 MD01G1061900.v1.1 MD01G1062000.v1.1 MD01G1062400.v1.1 MD01G1062500.v1.1 MD01G1063200.v1.1 MD01G1063300.v1.1 MD01G1063400.v1.1 MD01G1063700.v1.1 MD01G1063900.v1.1 MD01G1064200.v1.1 MD01G1064300.v1.1 MD01G1064400.v1.1 MD01G1064600.v1.1 MD01G1064700.v1.1 MD01G1181100.v1.1 MD01G1212300.v1.1 MD01G1212500.v1.1 MD01G1212600.v1.1 MD02G1271900.v1.1 MD07G1136500.v1.1 MD07G1139300.v1.1 MD07G1141200.v1.1 MD07G1144700.v1.1 MD08G1144200.v1.1 MD14G1186300.v1.1 MD14G1186500.v1.1 MD14G1186700.v1.1 MD14G1186800.v1.1 MD15G1351300.v1.1 MD15G1439500.v1.1
prunus_persica Prupe.1G067000_v2.0.a1 Prupe.2G077400_v2.0.a1 Prupe.2G077700_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078600_v2.0.a1 Prupe.2G078800_v2.0.a1 Prupe.2G099600_v2.0.a1 Prupe.2G099700_v2.0.a1 Prupe.2G155100_v2.0.a1 Prupe.2G155500_v2.0.a1 Prupe.2G155600_v2.0.a1 Prupe.2G155800_v2.0.a1 Prupe.2G155900_v2.0.a1 Prupe.2G156100_v2.0.a1 Prupe.2G166100_v2.0.a1 Prupe.2G166300_v2.0.a1 Prupe.2G167500_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G168400_v2.0.a1 Prupe.2G168700_v2.0.a1 Prupe.2G168800_v2.0.a1 Prupe.2G169000_v2.0.a1 Prupe.2G169100_v2.0.a1 Prupe.2G169200_v2.0.a1 Prupe.2G169500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G172300_v2.0.a1 Prupe.2G304800_v2.0.a1 Prupe.4G264800_v2.0.a1 Prupe.4G265000_v2.0.a1 Prupe.5G051900_v2.0.a1 Prupe.5G052000_v2.0.a1
pyrus_communis pycom01g08380 pycom01g08430 pycom01g08490 pycom01g08520 pycom01g08540 pycom01g08550 pycom01g08600 pycom01g08630 pycom01g08660 pycom01g08720 pycom01g09180 pycom01g09200 pycom01g09210 pycom01g09270 pycom01g09280 pycom01g09300 pycom01g09380 pycom01g19110 pycom01g22260 pycom01g22310 pycom01g22330 pycom01g22350 pycom01g22360 pycom02g23250 pycom07g13420 pycom07g13670 pycom07g13900 pycom07g13910 pycom07g13960 pycom07g13970 pycom07g25680 pycom11g22830
rosa_chinensis RchiOBHm_Chr0c22g0500431 RchiOBHm_Chr0c22g0500441 RchiOBHm_Chr0c22g0500561 RchiOBHm_Chr0c22g0500571 RchiOBHm_Chr0c22g0500611 RchiOBHm_Chr0c22g0500621 RchiOBHm_Chr0c22g0500631 RchiOBHm_Chr0c22g0500681 RchiOBHm_Chr1g0348221 RchiOBHm_Chr1g0348251 RchiOBHm_Chr1g0352861 RchiOBHm_Chr1g0352871 RchiOBHm_Chr1g0352891 RchiOBHm_Chr1g0352901 RchiOBHm_Chr1g0354671 RchiOBHm_Chr1g0354701 RchiOBHm_Chr1g0354711 RchiOBHm_Chr1g0354751 RchiOBHm_Chr1g0354761 RchiOBHm_Chr1g0354841 RchiOBHm_Chr1g0354851 RchiOBHm_Chr1g0354881 RchiOBHm_Chr1g0354971 RchiOBHm_Chr1g0354981 RchiOBHm_Chr1g0354991 RchiOBHm_Chr1g0355001 RchiOBHm_Chr1g0355011 RchiOBHm_Chr1g0355021 RchiOBHm_Chr1g0355861 RchiOBHm_Chr1g0379671 RchiOBHm_Chr1g0379681 RchiOBHm_Chr2g0096591 RchiOBHm_Chr2g0132821 RchiOBHm_Chr3g0454901 RchiOBHm_Chr3g0472711 RchiOBHm_Chr4g0400791 RchiOBHm_Chr5g0069481 RchiOBHm_Chr5g0069511 RchiOBHm_Chr5g0069551 RchiOBHm_Chr6g0254651 RchiOBHm_Chr6g0259721 RchiOBHm_Chr7g0205911 RchiOBHm_Chr7g0206401 RchiOBHm_Chr7g0206571 RchiOBHm_Chr7g0206581 RchiOBHm_Chr7g0206621 RchiOBHm_Chr7g0206631 RchiOBHm_Chr7g0206641 RchiOBHm_Chr7g0206681 RchiOBHm_Chr7g0206691 RchiOBHm_Chr7g0206751 RchiOBHm_Chr7g0206761 RchiOBHm_Chr7g0206851 RchiOBHm_Chr7g0206911 RchiOBHm_Chr7g0206921 RchiOBHm_Chr7g0207001 RchiOBHm_Chr7g0207011 RchiOBHm_Chr7g0207031 RchiOBHm_Chr7g0207101 RchiOBHm_Chr7g0207161 RchiOBHm_Chr7g0207201 RchiOBHm_Chr7g0207271 RchiOBHm_Chr7g0207301 RchiOBHm_Chr7g0207311 RchiOBHm_Chr7g0207421 RchiOBHm_Chr7g0207481 RchiOBHm_Chr7g0207491 RchiOBHm_Chr7g0207501 RchiOBHm_Chr7g0207521 RchiOBHm_Chr7g0207531 RchiOBHm_Chr7g0207561 RchiOBHm_Chr7g0207571 RchiOBHm_Chr7g0207581 RchiOBHm_Chr7g0207601 RchiOBHm_Chr7g0207621 RchiOBHm_Chr7g0207631 RchiOBHm_Chr7g0207651 RchiOBHm_Chr7g0207661 RchiOBHm_Chr7g0207711 RchiOBHm_Chr7g0207761 RchiOBHm_Chr7g0207801 RchiOBHm_Chr7g0208821 RchiOBHm_Chr7g0208831 RchiOBHm_Chr7g0208841 RchiOBHm_Chr7g0213601 RchiOBHm_Chr7g0215981 RchiOBHm_Chr7g0216021
rosa_laevigata RLG00000003193 RLG00000003194 RLG00000003287 RLG00000003288 RLG00000003289 RLG00000003293 RLG00000003294 RLG00000003295 RLG00000003297 RLG00000003299 RLG00000003301 RLG00000003327 RLG00000003347 RLG00000016653 RLG00000018642 RLG00000018643 RLG00000019285 RLG00000022542 RLG00000026368 RLG00000026371 RLG00000028124 RLG00000028125 RLG00000028183 RLG00000028184 RLG00000028185 RLG00000028188 RLG00000028673 RLG00000029267 RLG00000029325 RLG00000029674 RLG00000032883 RLG00000036055 RLG00000036058 RLG00000036065 RLG00000036068 RLG00000036071 RLG00000036072 RLG00000036075 RLG00000036076
rosa_multiflora Rmu_co8250183.1_g000001 Rmu_co8271981.1_g000001 Rmu_co8410829.1_g000001 Rmu_co8432879.1_g000001 Rmu_co8441941.1_g000001 Rmu_sc0000076.1_g000031 Rmu_sc0000738.1_g000038 Rmu_sc0000848.1_g000003 Rmu_sc0000848.1_g000014 Rmu_sc0000848.1_g000015 Rmu_sc0000848.1_g000016 Rmu_sc0001264.1_g000001 Rmu_sc0002284.1_g000018 Rmu_sc0002356.1_g000011 Rmu_sc0003020.1_g000003 Rmu_sc0003115.1_g000001 Rmu_sc0003115.1_g000002 Rmu_sc0003115.1_g000003 Rmu_sc0003115.1_g000004 Rmu_sc0003115.1_g000005 Rmu_sc0003115.1_g000008 Rmu_sc0003115.1_g000010 Rmu_sc0003115.1_g000011 Rmu_sc0003115.1_g000014 Rmu_sc0003565.1_g000002 Rmu_sc0003652.1_g000013 Rmu_sc0003652.1_g000015 Rmu_sc0003652.1_g000016 Rmu_sc0003652.1_g000019 Rmu_sc0003940.1_g000001 Rmu_sc0003940.1_g000004 Rmu_sc0003940.1_g000009 Rmu_sc0004084.1_g000010 Rmu_sc0004705.1_g000021 Rmu_sc0004972.1_g000007 Rmu_sc0004987.1_g000002 Rmu_sc0004987.1_g000006 Rmu_sc0005065.1_g000018 Rmu_sc0005065.1_g000029 Rmu_sc0005391.1_g000002 Rmu_sc0005633.1_g000003 Rmu_sc0005633.1_g000008 Rmu_sc0006632.1_g000014 Rmu_sc0006632.1_g000018 Rmu_sc0006681.1_g000010 Rmu_sc0006681.1_g000011 Rmu_sc0006733.1_g000003 Rmu_sc0007385.1_g000005 Rmu_sc0007385.1_g000007 Rmu_sc0007385.1_g000009 Rmu_sc0007385.1_g000016 Rmu_sc0007645.1_g000002 Rmu_sc0007645.1_g000003 Rmu_sc0007645.1_g000022 Rmu_sc0007828.1_g000008 Rmu_sc0008509.1_g000003 Rmu_sc0008509.1_g000015 Rmu_sc0008509.1_g000016 Rmu_sc0008509.1_g000020 Rmu_sc0008509.1_g000030 Rmu_sc0008509.1_g000041 Rmu_sc0008756.1_g000001 Rmu_sc0008756.1_g000003 Rmu_sc0013028.1_g000002 Rmu_sc0013028.1_g000003 Rmu_sc0013028.1_g000005 Rmu_sc0013160.1_g000001 Rmu_sc0014454.1_g000009 Rmu_sc0014455.1_g000007 Rmu_sc0014659.1_g000004 Rmu_sc0017798.1_g000002 Rmu_sc0017798.1_g000004 Rmu_sc0029608.1_g000001 Rmu_sc0037861.1_g000001 Rmu_sc0038750.1_g000001 Rmu_sc0042995.1_g000001 Rmu_ssc0000161.1_g000017
rosa_roxburghii Rroxscaffold_1G00009180 Rroxscaffold_1G00009190 Rroxscaffold_1G00011450 Rroxscaffold_1G00011480 Rroxscaffold_2G00111660 Rroxscaffold_2G00113570 Rroxscaffold_2G00122140 Rroxscaffold_3G00243730 Rroxscaffold_3G00245750 Rroxscaffold_3G00245760 Rroxscaffold_3G00250220 Rroxscaffold_3G00251160 Rroxscaffold_3G00251270 Rroxscaffold_3G00251280 Rroxscaffold_3G00251300 Rroxscaffold_3G00251340 Rroxscaffold_3G00251350 Rroxscaffold_3G00251390 Rroxscaffold_3G00251400 Rroxscaffold_3G00251560 Rroxscaffold_3G00251570 Rroxscaffold_3G00251870 Rroxscaffold_3G00252200 Rroxscaffold_3G00252210 Rroxscaffold_4G00279970 Rroxscaffold_4G00299970 Rroxscaffold_4G00300760 Rroxscaffold_4G00300780 Rroxscaffold_4G00300810 Rroxscaffold_4G00300850 Rroxscaffold_4G00307080 Rroxscaffold_4G00307100 Rroxscaffold_4G00313990 Rroxscaffold_6G00405080
rosa_rugosa Rorug01G0193600 Rorug01G0193700 Rorug01G0243800 Rorug01G0244000 Rorug01G0244000 Rorug01G0244400 Rorug01G0414300.1 Rorug01G0414500 Rorug01G0414600 Rorug02G0235600 Rorug02G0307900 Rorug02G0583100 Rorug02G0583200 Rorug02G0583300 Rorug05G0398000 Rorug05G0398100 Rorug05G0398200 Rorug05G0580300 Rorug05G0590300 Rorug06G0116000 Rorug06G0116100 Rorug07G0096800 Rorug07G0097100.1 Rorug07G0097200 Rorug07G0098600 Rorug07G0098600 Rorug07G0098700 Rorug07G0099100 Rorug07G0106100 Rorug07G0106200 Rorug07G0106200 Rorug07G0106300 Rorug07G0157600 Rorug07G0157700 Rorug07G0157700 Rorug07G0157800
rosa_samantha Rh1AG255500 Rh1AG256700 Rh1BG225800 Rh1BG226200 Rh1BG230000 Rh1CG195300 Rh1CG238400 Rh1CG238500 Rh1CG238900 Rh1CG239000 Rh1CG239300 Rh1CG239400 Rh1CG239800 Rh1CG240000 Rh1CG240200 Rh1CG240300 Rh1CG244300 Rh1CG406900 Rh1CG407300 Rh1CG407400 Rh2CG343600 Rh2DG383200 Rh3BG205900 Rh4AG404400 Rh4BG415500 Rh5AG455200 Rh5AG455600 Rh5CG497000 Rh5CG497200 Rh7AG228800 Rh7AG230400 Rh7AG230800 Rh7AG231200 Rh7AG231600 Rh7AG231800 Rh7AG232100 Rh7AG241600 Rh7BG236200 Rh7CG238200 Rh7CG239100 Rh7CG243400 Rh7CG244900
rosa_wichuraiana Rw0G023040 Rw1G017780 Rw1G022320 Rw1G022340 Rw1G022410 Rw1G022420 Rw1G022440 Rw1G022460 Rw1G022490 Rw1G022500 Rw1G022530 Rw1G022550 Rw1G022560 Rw1G022600 Rw1G023060 Rw1G038150 Rw1G038160 Rw2G008210 Rw2G022350 Rw2G029290 Rw4G015050 Rw4G019850 Rw5G024060 Rw5G042460 Rw7G019160 Rw7G019460 Rw7G019690 Rw7G019830 Rw7G019860 Rw7G019880 Rw7G019890 Rw7G019930 Rw7G019990 Rw7G020460 Rw7G025100 Rw7G025120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 3131
AccB7I CCANNNNNTGG 1 cut(s) 142
AccI GTMKAC 2 cut(s) 2533, 3099
AccIII TCCGGA 1 cut(s) 2525
AclWI GGATC 2 cut(s) 594, 1034
AcoI YGGCCR 1 cut(s) 133
AcyI GRCGYC 1 cut(s) 3003
AdeI CACNNNGTG 1 cut(s) 142
AfaI GTAC 8 cut(s) 793, 1111, 1432, 2338, 2701, 2896, 3230, 3296
AfiI CCNNNNNNNGG 6 cut(s) 142, 1913, 2181, 2608, 2670, 2840
AflIII ACRYGT 1 cut(s) 3225
AjnI CCWGG 3 cut(s) 227, 2703, 3136
AleI CACNNNNGTG 1 cut(s) 2473
AluBI AGCT 6 cut(s) 478, 727, 1605, 2051, 3274, 3351
AluI AGCT 6 cut(s) 478, 727, 1605, 2051, 3274, 3351
Alw21I GWGCWC 2 cut(s) 1607, 3062
AlwI GGATC 2 cut(s) 594, 1034
Ama87I CYCGRG 2 cut(s) 1669, 2146
Aor13HI TCCGGA 1 cut(s) 2525
AoxI GGCC 2 cut(s) 133, 2926
ApeKI GCWGC 4 cut(s) 282, 427, 958, 1279
Asp700I GAANNNNTTC 1 cut(s) 32
AspS9I GGNCC 7 cut(s) 445, 471, 670, 988, 1309, 1790, 2941
AsuC2I CCSGG 1 cut(s) 140
AsuHPI GGTGA 3 cut(s) 157, 1660, 2591
AvaI CYCGRG 2 cut(s) 1669, 2146
AvaII GGWCC 7 cut(s) 445, 471, 670, 988, 1309, 1790, 2941
AxyI CCTNAGG 1 cut(s) 3066
BaeI ACNNNNGTAYC 2 cut(s) 2683, 2716
BalI TGGCCA 1 cut(s) 135
BanII GRGCYC 2 cut(s) 1607, 2261
BarI GAAGNNNNNNTAC 2 cut(s) 754, 786
BbsI GAAGAC 4 cut(s) 758, 1076, 1397, 2658
Bbv12I GWGCWC 2 cut(s) 1607, 3062
BbvI GCAGC 4 cut(s) 294, 439, 945, 1266
BccI CCATC 7 cut(s) 315, 1342, 1780, 2473, 2733, 2984, 3288
BciT130I CCWGG 3 cut(s) 229, 2705, 3138
BciVI GTATCC 2 cut(s) 384, 2732
BcnI CCSGG 1 cut(s) 140
BfaI CTAG 2 cut(s) 1619, 2760
BfmI CTRYAG 1 cut(s) 280
BfuI GTATCC 2 cut(s) 384, 2732
BglII AGATCT 3 cut(s) 1621, 1688, 1924
BisI GCNGC 4 cut(s) 283, 428, 959, 1280
BlsI GCNGC 4 cut(s) 284, 429, 960, 1281
BmcAI AGTACT 3 cut(s) 793, 1111, 1432
Bme1390I CCNGG 4 cut(s) 140, 229, 2705, 3138
Bme18I GGWCC 7 cut(s) 445, 471, 670, 988, 1309, 1790, 2941
BmeT110I CYCGRG 2 cut(s) 1669, 2146
BmgT120I GGNCC 7 cut(s) 445, 471, 670, 988, 1309, 1790, 2941
BmiI GGNNCC 6 cut(s) 472, 473, 1743, 1791, 2012, 3335
BmrFI CCNGG 4 cut(s) 140, 229, 2705, 3138
BmrI ACTGGG 1 cut(s) 477
BmsI GCATC 3 cut(s) 282, 1375, 2669
BmuI ACTGGG 1 cut(s) 477
BpiI GAAGAC 4 cut(s) 758, 1076, 1397, 2658
BpmI CTGGAG 2 cut(s) 1663, 3101
BpuEI CTTGAG 1 cut(s) 1792
BpuMI CCSGG 1 cut(s) 140
Bsa29I ATCGAT 1 cut(s) 2740
BsaBI GATNNNNATC 1 cut(s) 1687
BsaHI GRCGYC 1 cut(s) 3003
BsaI GGTCTC 2 cut(s) 1679, 2988
BsaJI CCNNGG 4 cut(s) 228, 2703, 2704, 2929
BsaWI WCCGGW 1 cut(s) 2525
Bsc4I CCNNNNNNNGG 6 cut(s) 142, 1913, 2181, 2608, 2670, 2840
Bse21I CCTNAGG 1 cut(s) 3066
Bse8I GATNNNNATC 1 cut(s) 1687
BseAI TCCGGA 1 cut(s) 2525
BseBI CCWGG 3 cut(s) 229, 2705, 3138
BseCI ATCGAT 1 cut(s) 2740
BseDI CCNNGG 4 cut(s) 228, 2703, 2704, 2929
BseGI GGATG 6 cut(s) 273, 326, 1353, 1366, 1765, 2660
BseJI GATNNNNATC 1 cut(s) 1687
BseLI CCNNNNNNNGG 6 cut(s) 142, 1913, 2181, 2608, 2670, 2840
BseRI GAGGAG 5 cut(s) 209, 214, 1083, 1404, 3098
BseXI GCAGC 4 cut(s) 294, 439, 945, 1266
BseYI CCCAGC 1 cut(s) 474
BshFI GGCC 2 cut(s) 135, 2928
BshVI ATCGAT 1 cut(s) 2740
BsiHKAI GWGCWC 2 cut(s) 1607, 3062
BsiHKCI CYCGRG 2 cut(s) 1669, 2146
BsiSI CCGG 2 cut(s) 139, 2526
BslFI GGGAC 2 cut(s) 484, 2015
BslI CCNNNNNNNGG 6 cut(s) 142, 1913, 2181, 2608, 2670, 2840
BsmFI GGGAC 2 cut(s) 484, 2015
BsmI GAATGC 2 cut(s) 2460, 2490
BsnI GGCC 2 cut(s) 135, 2928
Bso31I GGTCTC 2 cut(s) 1679, 2988
BsoBI CYCGRG 2 cut(s) 1669, 2146
Bsp1286I GDGCHC 3 cut(s) 1607, 2261, 3062
Bsp13I TCCGGA 1 cut(s) 2525
Bsp1407I TGTACA 1 cut(s) 2336
BspANI GGCC 2 cut(s) 135, 2928
BspDI ATCGAT 1 cut(s) 2740
BspEI TCCGGA 1 cut(s) 2525
BspLI GGNNCC 6 cut(s) 472, 473, 1743, 1791, 2012, 3335
BspMAI CTGCAG 1 cut(s) 284
BspPI GGATC 2 cut(s) 594, 1034
BspTNI GGTCTC 2 cut(s) 1679, 2988
BsrGI TGTACA 1 cut(s) 2336
BssECI CCNNGG 4 cut(s) 228, 2703, 2704, 2929
BssNAI GTATAC 1 cut(s) 2534
BssNI GRCGYC 1 cut(s) 3003
BssT1I CCWWGG 1 cut(s) 2929
Bst1107I GTATAC 1 cut(s) 2534
Bst2UI CCWGG 3 cut(s) 229, 2705, 3138
Bst4CI ACNGT 2 cut(s) 2336, 3010
Bst6I CTCTTC 3 cut(s) 229, 780, 1633
BstACI GRCGYC 1 cut(s) 3003
BstAPI GCANNNNNTGC 1 cut(s) 279
BstAUI TGTACA 1 cut(s) 2336
BstC8I GCNNGC 2 cut(s) 895, 1216
BstENI CCTNNNNNAGG 1 cut(s) 2606
BstF5I GGATG 6 cut(s) 273, 326, 1353, 1366, 1765, 2660
BstMWI GCNNNNNNNGC 1 cut(s) 279
BstNI CCWGG 3 cut(s) 229, 2705, 3138
BstNSI RCATGY 2 cut(s) 3229, 3304
BstSCI CCNGG 4 cut(s) 138, 227, 2703, 3136
BstSFI CTRYAG 1 cut(s) 280
BstV1I GCAGC 4 cut(s) 294, 439, 945, 1266
BstV2I GAAGAC 4 cut(s) 758, 1076, 1397, 2658
BstX2I RGATCY 4 cut(s) 599, 1621, 1688, 1924
BstXI CCANNNNNNTGG 3 cut(s) 1571, 2162, 2891
BstYI RGATCY 4 cut(s) 599, 1621, 1688, 1924
BstZ17I GTATAC 1 cut(s) 2534
Bsu15I ATCGAT 1 cut(s) 2740
Bsu36I CCTNAGG 1 cut(s) 3066
BsuI GTATCC 2 cut(s) 384, 2732
BsuRI GGCC 2 cut(s) 135, 2928
BsuTUI ATCGAT 1 cut(s) 2740
BtsCI GGATG 6 cut(s) 273, 326, 1353, 1366, 1765, 2660
BtsI GCAGTG 1 cut(s) 277
BtsIMutI CAGTG 9 cut(s) 277, 465, 847, 1165, 2619, 2769, 3006, 3077, 3099
Cac8I GCNNGC 2 cut(s) 895, 1216
Cfr13I GGNCC 7 cut(s) 445, 471, 670, 988, 1309, 1790, 2941
ClaI ATCGAT 1 cut(s) 2740
CseI GACGC 2 cut(s) 1843, 3011
Csp6I GTAC 8 cut(s) 792, 1110, 1431, 2337, 2700, 2895, 3229, 3295
CspCI CAANNNNNGTGG 4 cut(s) 2608, 2643, 2995, 3030
CviQI GTAC 8 cut(s) 792, 1110, 1431, 2337, 2700, 2895, 3229, 3295
DraI TTTAAA 4 cut(s) 1642, 1722, 2796, 3252
DraIII CACNNNGTG 1 cut(s) 142
EaeI YGGCCR 1 cut(s) 133
Eam1104I CTCTTC 3 cut(s) 229, 780, 1633
EarI CTCTTC 3 cut(s) 229, 780, 1633
Ecl136II GAGCTC 1 cut(s) 1605
Eco130I CCWWGG 1 cut(s) 2929
Eco24I GRGCYC 2 cut(s) 1607, 2261
Eco31I GGTCTC 2 cut(s) 1679, 2988
Eco32I GATATC 1 cut(s) 1867
Eco47I GGWCC 7 cut(s) 445, 471, 670, 988, 1309, 1790, 2941
Eco53kI GAGCTC 1 cut(s) 1605
Eco81I CCTNAGG 1 cut(s) 3066
Eco88I CYCGRG 2 cut(s) 1669, 2146
EcoICRI GAGCTC 1 cut(s) 1605
EcoNI CCTNNNNNAGG 1 cut(s) 2606
EcoO109I RGGNCCY 1 cut(s) 471
EcoRI GAATTC 5 cut(s) 549, 949, 1270, 2241, 3039
EcoRII CCWGG 3 cut(s) 227, 2703, 3136
EcoRV GATATC 1 cut(s) 1867
EcoT14I CCWWGG 1 cut(s) 2929
EcoT38I GRGCYC 2 cut(s) 1607, 2261
ErhI CCWWGG 1 cut(s) 2929
FalI AAGNNNNNCTT 4 cut(s) 20, 52, 165, 197
FaqI GGGAC 2 cut(s) 484, 2015
FauNDI CATATG 2 cut(s) 330, 3054
FblI GTMKAC 2 cut(s) 2533, 3099
Fnu4HI GCNGC 4 cut(s) 283, 428, 959, 1280
FokI GGATG 6 cut(s) 260, 333, 1353, 1360, 1772, 2647
FriOI GRGCYC 2 cut(s) 1607, 2261
Fsp4HI GCNGC 4 cut(s) 283, 428, 959, 1280
FspBI CTAG 2 cut(s) 1619, 2760
GluI GCNGC 4 cut(s) 283, 428, 959, 1280
GsaI CCCAGC 1 cut(s) 478
GsuI CTGGAG 2 cut(s) 1663, 3101
HaeIII GGCC 2 cut(s) 135, 2928
HapII CCGG 2 cut(s) 139, 2526
HgaI GACGC 2 cut(s) 1843, 3011
Hin1I GRCGYC 1 cut(s) 3003
HincII GTYRAC 3 cut(s) 1569, 1994, 2116
HindII GTYRAC 3 cut(s) 1569, 1994, 2116
HindIII AAGCTT 1 cut(s) 2049
HinfI GANTC 7 cut(s) 15, 99, 325, 406, 2185, 2755, 3177
HpaI GTTAAC 2 cut(s) 1569, 2116
HpaII CCGG 2 cut(s) 139, 2526
HphI GGTGA 3 cut(s) 157, 1660, 2591
Hpy166II GTNNAC 7 cut(s) 343, 1569, 1793, 1994, 2116, 2534, 3100
Hpy8I GTNNAC 7 cut(s) 343, 1569, 1793, 1994, 2116, 2534, 3100
Hpy99I CGWCG 1 cut(s) 14
HpyCH4III ACNGT 2 cut(s) 2336, 3010
HpyCH4V TGCA 9 cut(s) 156, 261, 282, 427, 583, 1080, 1613, 1782, 2851
HpyF10VI GCNNNNNNNGC 1 cut(s) 279
Hsp92I GRCGYC 1 cut(s) 3003
KflI GGGWCCC 1 cut(s) 471
Kpn2I TCCGGA 1 cut(s) 2525
KspAI GTTAAC 2 cut(s) 1569, 2116
LmnI GCTCC 5 cut(s) 125, 732, 1909, 3085, 3333
Lsp1109I GCAGC 4 cut(s) 294, 439, 945, 1266
LweI GCATC 3 cut(s) 282, 1375, 2669
MaeI CTAG 2 cut(s) 1619, 2760
MaeIII GTNAC 9 cut(s) 145, 301, 677, 995, 1160, 1316, 1481, 2219, 2767
MfeI CAATTG 4 cut(s) 129, 1754, 2015, 2471
MflI RGATCY 4 cut(s) 599, 1621, 1688, 1924
MhlI GDGCHC 3 cut(s) 1607, 2261, 3062
MlsI TGGCCA 1 cut(s) 135
MluNI TGGCCA 1 cut(s) 135
MlyI GAGTC 2 cut(s) 415, 2179
MmeI TCCRAC 9 cut(s) 578, 690, 1956, 1988, 2341, 2386, 2919, 2927, 2973
Mox20I TGGCCA 1 cut(s) 135
MroI TCCGGA 1 cut(s) 2525
MroXI GAANNNNTTC 1 cut(s) 32
MscI TGGCCA 1 cut(s) 135
MslI CAYNNNNRTG 5 cut(s) 53, 333, 2160, 2451, 2473
Msp20I TGGCCA 1 cut(s) 135
MspI CCGG 2 cut(s) 139, 2526
MspR9I CCNGG 4 cut(s) 140, 229, 2705, 3138
MunI CAATTG 4 cut(s) 129, 1754, 2015, 2471
Mva1269I GAATGC 2 cut(s) 2460, 2490
MvaI CCWGG 3 cut(s) 229, 2705, 3138
MwoI GCNNNNNNNGC 1 cut(s) 279
NciI CCSGG 1 cut(s) 140
NdeI CATATG 2 cut(s) 330, 3054
NlaIV GGNNCC 6 cut(s) 472, 473, 1743, 1791, 2012, 3335
NmuCI GTSAC 4 cut(s) 145, 1160, 2219, 2767
NspI RCATGY 2 cut(s) 3229, 3304
OliI CACNNNNGTG 1 cut(s) 2473
PaeR7I CTCGAG 1 cut(s) 2146
PasI CCCWGGG 1 cut(s) 2704
PciI ACATGT 1 cut(s) 3225
PctI GAATGC 2 cut(s) 2460, 2490
PdmI GAANNNNTTC 1 cut(s) 32
PfeI GAWTC 5 cut(s) 15, 99, 325, 2755, 3177
PflMI CCANNNNNTGG 1 cut(s) 142
PkrI GCNGC 4 cut(s) 284, 429, 960, 1281
PleI GAGTC 2 cut(s) 414, 2179
PpsI GAGTC 2 cut(s) 414, 2179
PpuMI RGGWCCY 1 cut(s) 471
PscI ACATGT 1 cut(s) 3225
PsiI TTATAA 1 cut(s) 3131
Psp124BI GAGCTC 1 cut(s) 1607
Psp5II RGGWCCY 1 cut(s) 471
Psp6I CCWGG 3 cut(s) 227, 2703, 3136
PspFI CCCAGC 1 cut(s) 474
PspGI CCWGG 3 cut(s) 227, 2703, 3136
PspN4I GGNNCC 6 cut(s) 472, 473, 1743, 1791, 2012, 3335
PspPI GGNCC 7 cut(s) 445, 471, 670, 988, 1309, 1790, 2941
PspPPI RGGWCCY 1 cut(s) 471
PstI CTGCAG 1 cut(s) 284
PsuI RGATCY 4 cut(s) 599, 1621, 1688, 1924
RsaI GTAC 8 cut(s) 793, 1111, 1432, 2338, 2701, 2896, 3230, 3296
RsaNI GTAC 8 cut(s) 792, 1110, 1431, 2337, 2700, 2895, 3229, 3295
RseI CAYNNNNRTG 5 cut(s) 53, 333, 2160, 2451, 2473
SacI GAGCTC 1 cut(s) 1607
SatI GCNGC 4 cut(s) 283, 428, 959, 1280
Sau96I GGNCC 7 cut(s) 445, 471, 670, 988, 1309, 1790, 2941
ScaI AGTACT 3 cut(s) 793, 1111, 1432
SchI GAGTC 2 cut(s) 415, 2179
ScrFI CCNGG 4 cut(s) 140, 229, 2705, 3138
SduI GDGCHC 3 cut(s) 1607, 2261, 3062
SfaNI GCATC 3 cut(s) 282, 1375, 2669
SfcI CTRYAG 1 cut(s) 280
Sfr274I CTCGAG 1 cut(s) 2146
SinI GGWCC 7 cut(s) 445, 471, 670, 988, 1309, 1790, 2941
SlaI CTCGAG 1 cut(s) 2146
SmiMI CAYNNNNRTG 5 cut(s) 53, 333, 2160, 2451, 2473
SmlI CTYRAG 2 cut(s) 1771, 2146
SmoI CTYRAG 2 cut(s) 1771, 2146
SspI AATATT 1 cut(s) 440
SspMI CTAG 2 cut(s) 1619, 2760
SstI GAGCTC 1 cut(s) 1607
StyD4I CCNGG 4 cut(s) 138, 227, 2703, 3136
StyI CCWWGG 1 cut(s) 2929
TaaI ACNGT 2 cut(s) 2336, 3010
TaqI TCGA 6 cut(s) 519, 547, 1029, 2147, 2510, 2740
TatI WGTACW 5 cut(s) 791, 1109, 1430, 2336, 3228
TfiI GAWTC 5 cut(s) 15, 99, 325, 2755, 3177
TscAI CASTG 9 cut(s) 284, 472, 847, 1165, 2626, 2776, 3013, 3084, 3099
TseFI GTSAC 4 cut(s) 145, 1160, 2219, 2767
TseI GCWGC 4 cut(s) 282, 427, 958, 1279
Tsp45I GTSAC 4 cut(s) 145, 1160, 2219, 2767
TspGWI ACGGA 2 cut(s) 27, 2426
TspRI CASTG 9 cut(s) 284, 472, 847, 1165, 2626, 2776, 3013, 3084, 3099
Van91I CCANNNNNTGG 1 cut(s) 142
VpaK11BI GGWCC 7 cut(s) 445, 471, 670, 988, 1309, 1790, 2941
XagI CCTNNNNNAGG 1 cut(s) 2606
XbaI TCTAGA 1 cut(s) 1618
XceI RCATGY 2 cut(s) 3229, 3304
XcmI CCANNNNNNNNNTGG 1 cut(s) 1881
XhoI CTCGAG 1 cut(s) 2146
XmiI GTMKAC 2 cut(s) 2533, 3099
XmnI GAANNNNTTC 1 cut(s) 32
XspI CTAG 2 cut(s) 1619, 2760
ZrmI AGTACT 3 cut(s) 793, 1111, 1432
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.