MD01G1057400.v1.1

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr01
Physical Location & Seq
Reverse (-)
16208767 .. 16210098
1332 bp
Loading structure...
UTR
Exon/CDS
Intron
MD01G1057400.v1.1.491

Sequence Viewer

Length: 1308 bp
ATGGTTGAACAAAAAATTTCGCCATATTTTGACTTTTCAAAACTGGACTTGTATTTATATCAGAGGGGTGCTGTGTGCTGCATTTATGCATGTTTTGTGGTGGTAGCTTCATATCTTTATTACAACATTTGTGTGTTCTGCCTCTTGATCTTGATTGTTATTGTTTTTAAGATGGGGGGAATTATGGTGCTTTTGCTATTAATCATCACCCTACATGTGAACCTTGGCCACGACGATGCTAACATGACGATGAGGTGCACAGACAAGGAAAGGGAAGCACTCCTTGCATTCAAGCAAGGCCTCATCATGGACGAGCACAGCCAAGTAATATTCTCTTCGTGGGGAACAGAAGCCGCAAAACAAGATTGTTGCCGATGGGAAGGAGTCTCATGTGACAACCAAACTGGCCATGTTGTGCAGCTTGATCTCAGAGGCAATTACTATTTGCAAGGTACGATGATTAGTCCTAAACTGATTGAGTTGAAGCATTTGAAATATTTGAACCTTTCGAGGATTGACTTTGGTGGGAGCCAAGTTCCATATTTCATTGGTTCTCTAACCAATTTGAGATATCTCGATCTTTCTTGGTGTTCTTTGGGTGGAAAATTTCCAATTCAGGTTGGAAACCTTACCAACTTGCAGCACCTTGATCTCGGCTATATTGACTTCAGCGGTAATGTAGAAAATCTCGATTGGCTCCCTCGTCTTTCTTCGTTGACATATTTGGACTTGAGTGATAACAATCTCAGTAATGTTTTTTATTGGCCGGAAGCAGTTAATAAACTCCCCAAACTAACAACCTTGAGATTACAGAACTGTAGTCTTCCTTCTCCTCCAGTTCGTTCCACTCTTTCAAACATAAATTCTTCTAAATCTCTTTCTAGCATTGATCTTTCCTTGAACCGTCTCTCAACTTCTTCAATATTTCTGTGGATGTCCAACTACAGTACCAGCCTTGTTGATCTTTATCTCTTTTTCAACCAACTTGAAGGAGCAGAACCCCATTCTTTCTCTACGTTATGTAGTTTGCAATCATTGGATCTTTCCGGCAACAATTTGAGTGGACAGTTTTCCAGATTTGTTCCTACATGTGCTCAAAACTCCTTGGAGAGTTTGTGGCTCCATGGAAATCAATTAAGTGGAAGAATACCTGAAAGTATCGGACAAATGTCAAAGCTCGAGCATCTTAACCTTGGTATGAATGCTTTGGAAGGGGTGATTTCAGATTCCCATTTCTCTAAACTCTCCAAATTATCATATTTAGATTTGTCCTCCAACTCACTAGTTTTAAACTTCCAGTCTAATTAG

Protein Analysis

436

Amino Acids

48.88

Weight (kDa)

5.8

Isoelectric Point (pI)

38.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 88 - 132 2.4e-10 Leucine rich repeat N-terminal domain
LRR_14 PF23598 142 - 269 8e-11 Leucine-rich repeat region
LRR_8 PF13855 368 - 428 1.6e-08 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000028)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g45420 FvH4_4g14031 FvH4_5g20780 FvH4_6g28530 FvH4_7g14020 FvH4_7g14030 FvH4_7g14040 FvH4_7g14050 FvH4_7g14060 FvH4_7g14070 FvH4_7g14090 FvH4_7g14110 FvH4_7g14140 FvH4_7g14450
malus_domestica MD00G1189100.v1.1 MD01G1018600.v1.1 MD01G1053800.v1.1 MD01G1053900.v1.1 MD01G1054000.v1.1 MD01G1054100.v1.1 MD01G1056700.v1.1 MD01G1057000.v1.1 MD01G1057300.v1.1 MD01G1057400.v1.1 MD01G1061600.v1.1 MD01G1061800.v1.1 MD01G1061900.v1.1 MD01G1062000.v1.1 MD01G1062400.v1.1 MD01G1062500.v1.1 MD01G1063200.v1.1 MD01G1063300.v1.1 MD01G1063400.v1.1 MD01G1063700.v1.1 MD01G1063900.v1.1 MD01G1064200.v1.1 MD01G1064300.v1.1 MD01G1064400.v1.1 MD01G1064600.v1.1 MD01G1064700.v1.1 MD01G1181100.v1.1 MD01G1212300.v1.1 MD01G1212500.v1.1 MD01G1212600.v1.1 MD02G1271900.v1.1 MD07G1136500.v1.1 MD07G1139300.v1.1 MD07G1141200.v1.1 MD07G1144700.v1.1 MD08G1144200.v1.1 MD14G1186300.v1.1 MD14G1186500.v1.1 MD14G1186700.v1.1 MD14G1186800.v1.1 MD15G1351300.v1.1 MD15G1439500.v1.1
prunus_persica Prupe.1G067000_v2.0.a1 Prupe.2G077400_v2.0.a1 Prupe.2G077700_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078600_v2.0.a1 Prupe.2G078800_v2.0.a1 Prupe.2G099600_v2.0.a1 Prupe.2G099700_v2.0.a1 Prupe.2G155100_v2.0.a1 Prupe.2G155500_v2.0.a1 Prupe.2G155600_v2.0.a1 Prupe.2G155800_v2.0.a1 Prupe.2G155900_v2.0.a1 Prupe.2G156100_v2.0.a1 Prupe.2G166100_v2.0.a1 Prupe.2G166300_v2.0.a1 Prupe.2G167500_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G168400_v2.0.a1 Prupe.2G168700_v2.0.a1 Prupe.2G168800_v2.0.a1 Prupe.2G169000_v2.0.a1 Prupe.2G169100_v2.0.a1 Prupe.2G169200_v2.0.a1 Prupe.2G169500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G172300_v2.0.a1 Prupe.2G304800_v2.0.a1 Prupe.4G264800_v2.0.a1 Prupe.4G265000_v2.0.a1 Prupe.5G051900_v2.0.a1 Prupe.5G052000_v2.0.a1
pyrus_communis pycom01g08380 pycom01g08430 pycom01g08490 pycom01g08520 pycom01g08540 pycom01g08550 pycom01g08600 pycom01g08630 pycom01g08660 pycom01g08720 pycom01g09180 pycom01g09200 pycom01g09210 pycom01g09270 pycom01g09280 pycom01g09300 pycom01g09380 pycom01g19110 pycom01g22260 pycom01g22310 pycom01g22330 pycom01g22350 pycom01g22360 pycom02g23250 pycom07g13420 pycom07g13670 pycom07g13900 pycom07g13910 pycom07g13960 pycom07g13970 pycom07g25680 pycom11g22830
rosa_chinensis RchiOBHm_Chr0c22g0500431 RchiOBHm_Chr0c22g0500441 RchiOBHm_Chr0c22g0500561 RchiOBHm_Chr0c22g0500571 RchiOBHm_Chr0c22g0500611 RchiOBHm_Chr0c22g0500621 RchiOBHm_Chr0c22g0500631 RchiOBHm_Chr0c22g0500681 RchiOBHm_Chr1g0348221 RchiOBHm_Chr1g0348251 RchiOBHm_Chr1g0352861 RchiOBHm_Chr1g0352871 RchiOBHm_Chr1g0352891 RchiOBHm_Chr1g0352901 RchiOBHm_Chr1g0354671 RchiOBHm_Chr1g0354701 RchiOBHm_Chr1g0354711 RchiOBHm_Chr1g0354751 RchiOBHm_Chr1g0354761 RchiOBHm_Chr1g0354841 RchiOBHm_Chr1g0354851 RchiOBHm_Chr1g0354881 RchiOBHm_Chr1g0354971 RchiOBHm_Chr1g0354981 RchiOBHm_Chr1g0354991 RchiOBHm_Chr1g0355001 RchiOBHm_Chr1g0355011 RchiOBHm_Chr1g0355021 RchiOBHm_Chr1g0355861 RchiOBHm_Chr1g0379671 RchiOBHm_Chr1g0379681 RchiOBHm_Chr2g0096591 RchiOBHm_Chr2g0132821 RchiOBHm_Chr3g0454901 RchiOBHm_Chr3g0472711 RchiOBHm_Chr4g0400791 RchiOBHm_Chr5g0069481 RchiOBHm_Chr5g0069511 RchiOBHm_Chr5g0069551 RchiOBHm_Chr6g0254651 RchiOBHm_Chr6g0259721 RchiOBHm_Chr7g0205911 RchiOBHm_Chr7g0206401 RchiOBHm_Chr7g0206571 RchiOBHm_Chr7g0206581 RchiOBHm_Chr7g0206621 RchiOBHm_Chr7g0206631 RchiOBHm_Chr7g0206641 RchiOBHm_Chr7g0206681 RchiOBHm_Chr7g0206691 RchiOBHm_Chr7g0206751 RchiOBHm_Chr7g0206761 RchiOBHm_Chr7g0206851 RchiOBHm_Chr7g0206911 RchiOBHm_Chr7g0206921 RchiOBHm_Chr7g0207001 RchiOBHm_Chr7g0207011 RchiOBHm_Chr7g0207031 RchiOBHm_Chr7g0207101 RchiOBHm_Chr7g0207161 RchiOBHm_Chr7g0207201 RchiOBHm_Chr7g0207271 RchiOBHm_Chr7g0207301 RchiOBHm_Chr7g0207311 RchiOBHm_Chr7g0207421 RchiOBHm_Chr7g0207481 RchiOBHm_Chr7g0207491 RchiOBHm_Chr7g0207501 RchiOBHm_Chr7g0207521 RchiOBHm_Chr7g0207531 RchiOBHm_Chr7g0207561 RchiOBHm_Chr7g0207571 RchiOBHm_Chr7g0207581 RchiOBHm_Chr7g0207601 RchiOBHm_Chr7g0207621 RchiOBHm_Chr7g0207631 RchiOBHm_Chr7g0207651 RchiOBHm_Chr7g0207661 RchiOBHm_Chr7g0207711 RchiOBHm_Chr7g0207761 RchiOBHm_Chr7g0207801 RchiOBHm_Chr7g0208821 RchiOBHm_Chr7g0208831 RchiOBHm_Chr7g0208841 RchiOBHm_Chr7g0213601 RchiOBHm_Chr7g0215981 RchiOBHm_Chr7g0216021
rosa_laevigata RLG00000003193 RLG00000003194 RLG00000003287 RLG00000003288 RLG00000003289 RLG00000003293 RLG00000003294 RLG00000003295 RLG00000003297 RLG00000003299 RLG00000003301 RLG00000003327 RLG00000003347 RLG00000016653 RLG00000018642 RLG00000018643 RLG00000019285 RLG00000022542 RLG00000026368 RLG00000026371 RLG00000028124 RLG00000028125 RLG00000028183 RLG00000028184 RLG00000028185 RLG00000028188 RLG00000028673 RLG00000029267 RLG00000029325 RLG00000029674 RLG00000032883 RLG00000036055 RLG00000036058 RLG00000036065 RLG00000036068 RLG00000036071 RLG00000036072 RLG00000036075 RLG00000036076
rosa_multiflora Rmu_co8250183.1_g000001 Rmu_co8271981.1_g000001 Rmu_co8410829.1_g000001 Rmu_co8432879.1_g000001 Rmu_co8441941.1_g000001 Rmu_sc0000076.1_g000031 Rmu_sc0000738.1_g000038 Rmu_sc0000848.1_g000003 Rmu_sc0000848.1_g000014 Rmu_sc0000848.1_g000015 Rmu_sc0000848.1_g000016 Rmu_sc0001264.1_g000001 Rmu_sc0002284.1_g000018 Rmu_sc0002356.1_g000011 Rmu_sc0003020.1_g000003 Rmu_sc0003115.1_g000001 Rmu_sc0003115.1_g000002 Rmu_sc0003115.1_g000003 Rmu_sc0003115.1_g000004 Rmu_sc0003115.1_g000005 Rmu_sc0003115.1_g000008 Rmu_sc0003115.1_g000010 Rmu_sc0003115.1_g000011 Rmu_sc0003115.1_g000014 Rmu_sc0003565.1_g000002 Rmu_sc0003652.1_g000013 Rmu_sc0003652.1_g000015 Rmu_sc0003652.1_g000016 Rmu_sc0003652.1_g000019 Rmu_sc0003940.1_g000001 Rmu_sc0003940.1_g000004 Rmu_sc0003940.1_g000009 Rmu_sc0004084.1_g000010 Rmu_sc0004705.1_g000021 Rmu_sc0004972.1_g000007 Rmu_sc0004987.1_g000002 Rmu_sc0004987.1_g000006 Rmu_sc0005065.1_g000018 Rmu_sc0005065.1_g000029 Rmu_sc0005391.1_g000002 Rmu_sc0005633.1_g000003 Rmu_sc0005633.1_g000008 Rmu_sc0006632.1_g000014 Rmu_sc0006632.1_g000018 Rmu_sc0006681.1_g000010 Rmu_sc0006681.1_g000011 Rmu_sc0006733.1_g000003 Rmu_sc0007385.1_g000005 Rmu_sc0007385.1_g000007 Rmu_sc0007385.1_g000009 Rmu_sc0007385.1_g000016 Rmu_sc0007645.1_g000002 Rmu_sc0007645.1_g000003 Rmu_sc0007645.1_g000022 Rmu_sc0007828.1_g000008 Rmu_sc0008509.1_g000003 Rmu_sc0008509.1_g000015 Rmu_sc0008509.1_g000016 Rmu_sc0008509.1_g000020 Rmu_sc0008509.1_g000030 Rmu_sc0008509.1_g000041 Rmu_sc0008756.1_g000001 Rmu_sc0008756.1_g000003 Rmu_sc0013028.1_g000002 Rmu_sc0013028.1_g000003 Rmu_sc0013028.1_g000005 Rmu_sc0013160.1_g000001 Rmu_sc0014454.1_g000009 Rmu_sc0014455.1_g000007 Rmu_sc0014659.1_g000004 Rmu_sc0017798.1_g000002 Rmu_sc0017798.1_g000004 Rmu_sc0029608.1_g000001 Rmu_sc0037861.1_g000001 Rmu_sc0038750.1_g000001 Rmu_sc0042995.1_g000001 Rmu_ssc0000161.1_g000017
rosa_roxburghii Rroxscaffold_1G00009180 Rroxscaffold_1G00009190 Rroxscaffold_1G00011450 Rroxscaffold_1G00011480 Rroxscaffold_2G00111660 Rroxscaffold_2G00113570 Rroxscaffold_2G00122140 Rroxscaffold_3G00243730 Rroxscaffold_3G00245750 Rroxscaffold_3G00245760 Rroxscaffold_3G00250220 Rroxscaffold_3G00251160 Rroxscaffold_3G00251270 Rroxscaffold_3G00251280 Rroxscaffold_3G00251300 Rroxscaffold_3G00251340 Rroxscaffold_3G00251350 Rroxscaffold_3G00251390 Rroxscaffold_3G00251400 Rroxscaffold_3G00251560 Rroxscaffold_3G00251570 Rroxscaffold_3G00251870 Rroxscaffold_3G00252200 Rroxscaffold_3G00252210 Rroxscaffold_4G00279970 Rroxscaffold_4G00299970 Rroxscaffold_4G00300760 Rroxscaffold_4G00300780 Rroxscaffold_4G00300810 Rroxscaffold_4G00300850 Rroxscaffold_4G00307080 Rroxscaffold_4G00307100 Rroxscaffold_4G00313990 Rroxscaffold_6G00405080
rosa_rugosa Rorug01G0193600 Rorug01G0193700 Rorug01G0243800 Rorug01G0244000 Rorug01G0244000 Rorug01G0244400 Rorug01G0414300.1 Rorug01G0414500 Rorug01G0414600 Rorug02G0235600 Rorug02G0307900 Rorug02G0583100 Rorug02G0583200 Rorug02G0583300 Rorug05G0398000 Rorug05G0398100 Rorug05G0398200 Rorug05G0580300 Rorug05G0590300 Rorug06G0116000 Rorug06G0116100 Rorug07G0096800 Rorug07G0097100.1 Rorug07G0097200 Rorug07G0098600 Rorug07G0098600 Rorug07G0098700 Rorug07G0099100 Rorug07G0106100 Rorug07G0106200 Rorug07G0106200 Rorug07G0106300 Rorug07G0157600 Rorug07G0157700 Rorug07G0157700 Rorug07G0157800
rosa_samantha Rh1AG255500 Rh1AG256700 Rh1BG225800 Rh1BG226200 Rh1BG230000 Rh1CG195300 Rh1CG238400 Rh1CG238500 Rh1CG238900 Rh1CG239000 Rh1CG239300 Rh1CG239400 Rh1CG239800 Rh1CG240000 Rh1CG240200 Rh1CG240300 Rh1CG244300 Rh1CG406900 Rh1CG407300 Rh1CG407400 Rh2CG343600 Rh2DG383200 Rh3BG205900 Rh4AG404400 Rh4BG415500 Rh5AG455200 Rh5AG455600 Rh5CG497000 Rh5CG497200 Rh7AG228800 Rh7AG230400 Rh7AG230800 Rh7AG231200 Rh7AG231600 Rh7AG231800 Rh7AG232100 Rh7AG241600 Rh7BG236200 Rh7CG238200 Rh7CG239100 Rh7CG243400 Rh7CG244900
rosa_wichuraiana Rw0G023040 Rw1G017780 Rw1G022320 Rw1G022340 Rw1G022410 Rw1G022420 Rw1G022440 Rw1G022460 Rw1G022490 Rw1G022500 Rw1G022530 Rw1G022550 Rw1G022560 Rw1G022600 Rw1G023060 Rw1G038150 Rw1G038160 Rw2G008210 Rw2G022350 Rw2G029290 Rw4G015050 Rw4G019850 Rw5G024060 Rw5G042460 Rw7G019160 Rw7G019460 Rw7G019690 Rw7G019830 Rw7G019860 Rw7G019880 Rw7G019890 Rw7G019930 Rw7G019990 Rw7G020460 Rw7G025100 Rw7G025120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 354, 672
AclWI GGATC 1 cut(s) 1047
AcoI YGGCCR 3 cut(s) 226, 406, 764
AcsI RAATTY 3 cut(s) 15, 605, 862
AcuI CTGAAG 1 cut(s) 652
AfaI GTAC 2 cut(s) 454, 949
AfiI CCNNNNNNNGG 1 cut(s) 307
AflIII ACRYGT 2 cut(s) 214, 1088
AhlI ACTAGT 1 cut(s) 1282
AluBI AGCT 3 cut(s) 107, 421, 1177
AluI AGCT 3 cut(s) 107, 421, 1177
Alw21I GWGCWC 3 cut(s) 260, 318, 1096
Alw26I GTCTC 2 cut(s) 391, 911
Alw44I GTGCAC 1 cut(s) 256
AlwI GGATC 1 cut(s) 1047
Ama87I CYCGRG 1 cut(s) 1178
AoxI GGCC 4 cut(s) 226, 298, 406, 764
ApaLI GTGCAC 1 cut(s) 256
ApeKI GCWGC 3 cut(s) 78, 418, 640
ApoI RAATTY 3 cut(s) 15, 605, 862
AseI ATTAAT 1 cut(s) 200
AsuHPI GGTGA 2 cut(s) 199, 1228
AvaI CYCGRG 1 cut(s) 1178
BaeGI GKGCMC 1 cut(s) 260
BaeI ACNNNNGTAYC 2 cut(s) 931, 964
BalI TGGCCA 2 cut(s) 228, 408
BarI GAAGNNNNNNTAC 2 cut(s) 811, 843
BbsI GAAGAC 1 cut(s) 815
Bbv12I GWGCWC 3 cut(s) 260, 318, 1096
BbvI GCAGC 3 cut(s) 65, 430, 652
BccI CCATC 2 cut(s) 166, 369
BcoDI GTCTC 2 cut(s) 391, 911
BcuI ACTAGT 1 cut(s) 1282
BfaI CTAG 2 cut(s) 882, 1283
BfmI CTRYAG 2 cut(s) 817, 943
BisI GCNGC 4 cut(s) 79, 354, 419, 641
BlsI GCNGC 4 cut(s) 80, 355, 420, 642
BmeT110I CYCGRG 1 cut(s) 1178
BmiI GGNNCC 3 cut(s) 530, 698, 1121
BmsI GCATC 2 cut(s) 226, 1192
BoxI GACNNNNGTC 1 cut(s) 1168
BpiI GAAGAC 1 cut(s) 815
BpmI CTGGAG 1 cut(s) 819
BpuEI CTTGAG 2 cut(s) 751, 823
BsaBI GATNNNNATC 2 cut(s) 741, 966
BsaJI CCNNGG 4 cut(s) 223, 1104, 1123, 1192
BsaXI ACNNNNNCTCC 2 cut(s) 1100, 1130
Bsc4I CCNNNNNNNGG 1 cut(s) 307
Bse1I ACTGG 4 cut(s) 48, 409, 836, 1297
Bse8I GATNNNNATC 2 cut(s) 741, 966
BseDI CCNNGG 4 cut(s) 223, 1104, 1123, 1192
BseGI GGATG 1 cut(s) 939
BseJI GATNNNNATC 2 cut(s) 741, 966
BseLI CCNNNNNNNGG 1 cut(s) 307
BseMII CTCAG 2 cut(s) 442, 760
BseNI ACTGG 4 cut(s) 48, 409, 836, 1297
BseRI GAGGAG 1 cut(s) 822
BseSI GKGCMC 1 cut(s) 260
BseXI GCAGC 3 cut(s) 65, 430, 652
BsgI GTGCAG 1 cut(s) 437
BshFI GGCC 4 cut(s) 228, 300, 408, 766
BsiHKAI GWGCWC 3 cut(s) 260, 318, 1096
BsiHKCI CYCGRG 1 cut(s) 1178
BsiSI CCGG 2 cut(s) 767, 1047
BslI CCNNNNNNNGG 1 cut(s) 307
BsmAI GTCTC 2 cut(s) 391, 911
BsmBI CGTCTC 1 cut(s) 911
BsmI GAATGC 2 cut(s) 287, 1207
BsnI GGCC 4 cut(s) 228, 300, 408, 766
BsoBI CYCGRG 1 cut(s) 1178
Bsp1286I GDGCHC 3 cut(s) 260, 318, 1096
Bsp143I GATC 7 cut(s) 147, 424, 577, 649, 889, 961, 1039
Bsp19I CCATGG 1 cut(s) 1123
BspACI CCGC 2 cut(s) 354, 672
BspANI GGCC 4 cut(s) 228, 300, 408, 766
BspCNI CTCAG 2 cut(s) 441, 759
BspLI GGNNCC 3 cut(s) 530, 698, 1121
BspPI GGATC 1 cut(s) 1047
BsrI ACTGG 4 cut(s) 48, 409, 836, 1297
BssECI CCNNGG 4 cut(s) 223, 1104, 1123, 1192
BssMI GATC 7 cut(s) 147, 424, 577, 649, 889, 961, 1039
BssT1I CCWWGG 4 cut(s) 223, 1104, 1123, 1192
Bst4CI ACNGT 4 cut(s) 818, 905, 947, 1068
Bst6I CTCTTC 1 cut(s) 340
BstAPI GCANNNNNTGC 1 cut(s) 284
BstDEI CTNAG 2 cut(s) 428, 746
BstDSI CCRYGG 1 cut(s) 1123
BstF5I GGATG 1 cut(s) 939
BstKTI GATC 7 cut(s) 150, 427, 580, 652, 892, 964, 1042
BstMAI GTCTC 2 cut(s) 391, 911
BstMBI GATC 7 cut(s) 147, 424, 577, 649, 889, 961, 1039
BstMWI GCNNNNNNNGC 1 cut(s) 284
BstNSI RCATGY 3 cut(s) 93, 218, 1092
BstPAI GACNNNNGTC 1 cut(s) 1168
BstSFI CTRYAG 2 cut(s) 817, 943
BstSLI GKGCMC 1 cut(s) 260
BstV1I GCAGC 3 cut(s) 65, 430, 652
BstV2I GAAGAC 1 cut(s) 815
BstX2I RGATCY 1 cut(s) 1039
BstYI RGATCY 1 cut(s) 1039
BsuRI GGCC 4 cut(s) 228, 300, 408, 766
BtgI CCRYGG 1 cut(s) 1123
BtsCI GGATG 1 cut(s) 939
Csp6I GTAC 2 cut(s) 453, 948
CspCI CAANNNNNGTGG 2 cut(s) 1042, 1077
CviAII CATG 8 cut(s) 90, 215, 244, 307, 390, 410, 1089, 1124
CviQI GTAC 2 cut(s) 453, 948
DdeI CTNAG 2 cut(s) 428, 746
DpnI GATC 7 cut(s) 149, 426, 579, 651, 891, 963, 1041
DpnII GATC 7 cut(s) 147, 424, 577, 649, 889, 961, 1039
DraI TTTAAA 1 cut(s) 1290
EaeI YGGCCR 3 cut(s) 226, 406, 764
Eam1104I CTCTTC 1 cut(s) 340
EarI CTCTTC 1 cut(s) 340
Eco130I CCWWGG 4 cut(s) 223, 1104, 1123, 1192
Eco147I AGGCCT 1 cut(s) 300
Eco32I GATATC 1 cut(s) 572
Eco57I CTGAAG 1 cut(s) 652
Eco88I CYCGRG 1 cut(s) 1178
EcoRV GATATC 1 cut(s) 572
EcoT14I CCWWGG 4 cut(s) 223, 1104, 1123, 1192
EcoT22I ATGCAT 1 cut(s) 91
ErhI CCWWGG 4 cut(s) 223, 1104, 1123, 1192
Esp3I CGTCTC 1 cut(s) 911
FaeI CATG 8 cut(s) 93, 218, 247, 310, 393, 413, 1092, 1127
FalI AAGNNNNNCTT 2 cut(s) 267, 299
FatI CATG 8 cut(s) 89, 214, 243, 306, 389, 409, 1088, 1123
Fnu4HI GCNGC 4 cut(s) 79, 354, 419, 641
FokI GGATG 1 cut(s) 946
Fsp4HI GCNGC 4 cut(s) 79, 354, 419, 641
FspBI CTAG 2 cut(s) 882, 1283
GluI GCNGC 4 cut(s) 79, 354, 419, 641
GsuI CTGGAG 1 cut(s) 819
HaeIII GGCC 4 cut(s) 228, 300, 408, 766
HapII CCGG 2 cut(s) 767, 1047
Hin1II CATG 8 cut(s) 93, 218, 247, 310, 393, 413, 1092, 1127
HincII GTYRAC 1 cut(s) 717
HindII GTYRAC 1 cut(s) 717
HinfI GANTC 2 cut(s) 384, 1226
HpaII CCGG 2 cut(s) 767, 1047
HphI GGTGA 2 cut(s) 199, 1228
Hpy166II GTNNAC 4 cut(s) 220, 258, 717, 1064
Hpy188I TCNGA 4 cut(s) 63, 431, 1163, 1225
Hpy188III TCNNGA 5 cut(s) 145, 151, 575, 689, 1074
Hpy8I GTNNAC 4 cut(s) 220, 258, 717, 1064
Hpy99I CGWCG 1 cut(s) 236
HpyAV CCTTC 4 cut(s) 374, 837, 983, 1205
HpyCH4III ACNGT 4 cut(s) 818, 905, 947, 1068
HpyCH4IV ACGT 1 cut(s) 1016
HpyCH4V TGCA 8 cut(s) 81, 89, 258, 287, 418, 448, 640, 1030
HpyF10VI GCNNNNNNNGC 1 cut(s) 284
HpyF3I CTNAG 2 cut(s) 428, 746
HpySE526I ACGT 1 cut(s) 1016
Hsp92II CATG 8 cut(s) 93, 218, 247, 310, 393, 413, 1092, 1127
Kzo9I GATC 7 cut(s) 147, 424, 577, 649, 889, 961, 1039
LmnI GCTCC 4 cut(s) 528, 702, 992, 1125
LpnPI CCDG 9 cut(s) 29, 390, 602, 780, 849, 964, 1060, 1087, 1164
Lsp1109I GCAGC 3 cut(s) 65, 430, 652
LweI GCATC 2 cut(s) 226, 1192
MaeI CTAG 2 cut(s) 882, 1283
MaeII ACGT 1 cut(s) 1016
MaeIII GTNAC 1 cut(s) 392
MalI GATC 7 cut(s) 149, 426, 579, 651, 891, 963, 1041
MboI GATC 7 cut(s) 147, 424, 577, 649, 889, 961, 1039
MboII GAAGA 6 cut(s) 327, 702, 815, 858, 909, 1155
MflI RGATCY 1 cut(s) 1039
MhlI GDGCHC 3 cut(s) 260, 318, 1096
MlsI TGGCCA 2 cut(s) 228, 408
MluNI TGGCCA 2 cut(s) 228, 408
MlyI GAGTC 1 cut(s) 393
MmeI TCCRAC 3 cut(s) 601, 963, 1299
MnlI CCTC 9 cut(s) 57, 152, 246, 311, 425, 504, 711, 843, 1282
Mox20I TGGCCA 2 cut(s) 228, 408
Mph1103I ATGCAT 1 cut(s) 91
MscI TGGCCA 2 cut(s) 228, 408
MseI TTAA 6 cut(s) 168, 200, 777, 1136, 1188, 1289
MslI CAYNNNNRTG 3 cut(s) 131, 234, 248
Msp20I TGGCCA 2 cut(s) 228, 408
MspA1I CMGCKG 1 cut(s) 672
MspI CCGG 2 cut(s) 767, 1047
Mva1269I GAATGC 2 cut(s) 287, 1207
MwoI GCNNNNNNNGC 1 cut(s) 284
NcoI CCATGG 1 cut(s) 1123
NdeII GATC 7 cut(s) 147, 424, 577, 649, 889, 961, 1039
NlaIII CATG 8 cut(s) 93, 218, 247, 310, 393, 413, 1092, 1127
NlaIV GGNNCC 3 cut(s) 530, 698, 1121
NmeAIII GCCGAG 1 cut(s) 633
NmuCI GTSAC 1 cut(s) 392
NsiI ATGCAT 1 cut(s) 91
NspI RCATGY 3 cut(s) 93, 218, 1092
PaeR7I CTCGAG 1 cut(s) 1178
PceI AGGCCT 1 cut(s) 300
PciI ACATGT 2 cut(s) 214, 1088
PctI GAATGC 2 cut(s) 287, 1207
PfeI GAWTC 1 cut(s) 1226
PkrI GCNGC 4 cut(s) 80, 355, 420, 642
PleI GAGTC 1 cut(s) 392
PpsI GAGTC 1 cut(s) 392
PscI ACATGT 2 cut(s) 214, 1088
PshAI GACNNNNGTC 1 cut(s) 1168
PshBI ATTAAT 1 cut(s) 200
PspN4I GGNNCC 3 cut(s) 530, 698, 1121
PspXI VCTCGAGB 1 cut(s) 1178
PsuI RGATCY 1 cut(s) 1039
RsaI GTAC 2 cut(s) 454, 949
RsaNI GTAC 2 cut(s) 453, 948
RseI CAYNNNNRTG 3 cut(s) 131, 234, 248
SaqAI TTAA 6 cut(s) 168, 200, 777, 1136, 1188, 1289
SatI GCNGC 4 cut(s) 79, 354, 419, 641
Sau3AI GATC 7 cut(s) 147, 424, 577, 649, 889, 961, 1039
SchI GAGTC 1 cut(s) 393
SduI GDGCHC 3 cut(s) 260, 318, 1096
SfaNI GCATC 2 cut(s) 226, 1192
SfcI CTRYAG 2 cut(s) 817, 943
Sfr274I CTCGAG 1 cut(s) 1178
SlaI CTCGAG 1 cut(s) 1178
SmiMI CAYNNNNRTG 3 cut(s) 131, 234, 248
SmlI CTYRAG 3 cut(s) 730, 802, 1178
SmoI CTYRAG 3 cut(s) 730, 802, 1178
SpeI ACTAGT 1 cut(s) 1282
SseBI AGGCCT 1 cut(s) 300
SsiI CCGC 2 cut(s) 354, 672
SspI AATATT 3 cut(s) 330, 497, 924
SspMI CTAG 2 cut(s) 882, 1283
StuI AGGCCT 1 cut(s) 300
StyI CCWWGG 4 cut(s) 223, 1104, 1123, 1192
TaaI ACNGT 4 cut(s) 818, 905, 947, 1068
TaiI ACGT 1 cut(s) 1019
TaqI TCGA 4 cut(s) 509, 576, 690, 1179
TauI GCSGC 1 cut(s) 356
TfiI GAWTC 1 cut(s) 1226
Tru1I TTAA 6 cut(s) 168, 200, 777, 1136, 1188, 1289
Tru9I TTAA 6 cut(s) 168, 200, 777, 1136, 1188, 1289
TseFI GTSAC 1 cut(s) 392
TseI GCWGC 3 cut(s) 78, 418, 640
Tsp45I GTSAC 1 cut(s) 392
TspDTI ATGAA 3 cut(s) 99, 535, 1214
VneI GTGCAC 1 cut(s) 256
VspI ATTAAT 1 cut(s) 200
XapI RAATTY 3 cut(s) 15, 605, 862
XceI RCATGY 3 cut(s) 93, 218, 1092
XhoI CTCGAG 1 cut(s) 1178
XspI CTAG 2 cut(s) 882, 1283
Zsp2I ATGCAT 1 cut(s) 91
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.