Leucine Rich repeat
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 1595 |
| AciI | CCGC | 5 cut(s) | 1236, 1373, 1658, 1794, 1900 |
| AclWI | GGATC | 3 cut(s) | 211, 574, 597 |
| AcoI | YGGCCR | 1 cut(s) | 1078 |
| AcsI | RAATTY | 6 cut(s) | 70, 331, 877, 1368, 1512, 1584 |
| AcuI | CTGAAG | 3 cut(s) | 138, 1467, 1589 |
| AfaI | GTAC | 3 cut(s) | 279, 740, 1886 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 199, 1606 |
| AflII | CTTAAG | 1 cut(s) | 1808 |
| AflIII | ACRYGT | 2 cut(s) | 221, 759 |
| AhlI | ACTAGT | 1 cut(s) | 458 |
| AjnI | CCWGG | 2 cut(s) | 1737, 1842 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1290, 1322 |
| Alw21I | GWGCWC | 1 cut(s) | 431 |
| Alw26I | GTCTC | 2 cut(s) | 804, 1733 |
| AlwI | GGATC | 3 cut(s) | 211, 574, 597 |
| Ama87I | CYCGRG | 1 cut(s) | 281 |
| AoxI | GGCC | 3 cut(s) | 357, 490, 1078 |
| ApaI | GGGCCC | 1 cut(s) | 494 |
| ApeKI | GCWGC | 2 cut(s) | 78, 1163 |
| ApoI | RAATTY | 6 cut(s) | 70, 331, 877, 1368, 1512, 1584 |
| AspLEI | GCGC | 1 cut(s) | 257 |
| AspS9I | GGNCC | 5 cut(s) | 358, 490, 491, 1180, 1652 |
| AsuC2I | CCSGG | 1 cut(s) | 328 |
| AsuHPI | GGTGA | 1 cut(s) | 1668 |
| AvaI | CYCGRG | 1 cut(s) | 281 |
| AvaII | GGWCC | 2 cut(s) | 1180, 1652 |
| BaeGI | GKGCMC | 1 cut(s) | 494 |
| BalI | TGGCCA | 1 cut(s) | 1080 |
| BanI | GGYRCC | 1 cut(s) | 1595 |
| BanII | GRGCYC | 2 cut(s) | 431, 494 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 36, 68 |
| BbsI | GAAGAC | 4 cut(s) | 126, 681, 771, 1455 |
| Bbv12I | GWGCWC | 1 cut(s) | 431 |
| BbvI | GCAGC | 2 cut(s) | 90, 1150 |
| BccI | CCATC | 5 cut(s) | 724, 1597, 1676, 1718, 1780 |
| BceAI | ACGGC | 1 cut(s) | 757 |
| BciT130I | CCWGG | 2 cut(s) | 1739, 1844 |
| BciVI | GTATCC | 1 cut(s) | 45 |
| BcnI | CCSGG | 1 cut(s) | 328 |
| BcoDI | GTCTC | 2 cut(s) | 804, 1733 |
| BcuI | ACTAGT | 1 cut(s) | 458 |
| BfaI | CTAG | 6 cut(s) | 11, 20, 303, 459, 1160, 1419 |
| BfmI | CTRYAG | 1 cut(s) | 944 |
| BfoI | RGCGCY | 1 cut(s) | 258 |
| BfrI | CTTAAG | 1 cut(s) | 1808 |
| BfuI | GTATCC | 1 cut(s) | 45 |
| BglII | AGATCT | 2 cut(s) | 22, 616 |
| BisI | GCNGC | 3 cut(s) | 79, 1164, 1795 |
| BlsI | GCNGC | 3 cut(s) | 80, 1165, 1796 |
| Bme1390I | CCNGG | 3 cut(s) | 328, 1739, 1844 |
| Bme18I | GGWCC | 2 cut(s) | 1180, 1652 |
| BmeT110I | CYCGRG | 1 cut(s) | 281 |
| BmgT120I | GGNCC | 5 cut(s) | 358, 490, 491, 1180, 1652 |
| BmiI | GGNNCC | 3 cut(s) | 191, 492, 1597 |
| BmrFI | CCNGG | 3 cut(s) | 328, 1739, 1844 |
| BmsI | GCATC | 1 cut(s) | 855 |
| BpiI | GAAGAC | 4 cut(s) | 126, 681, 771, 1455 |
| Bpu10I | CCTNAGC | 1 cut(s) | 425 |
| BpuEI | CTTGAG | 3 cut(s) | 691, 1474, 1677 |
| BpuMI | CCSGG | 1 cut(s) | 328 |
| BsaAI | YACGTR | 1 cut(s) | 738 |
| BsaBI | GATNNNNATC | 1 cut(s) | 438 |
| BsaI | GGTCTC | 1 cut(s) | 1733 |
| BsaJI | CCNNGG | 4 cut(s) | 174, 637, 1036, 1738 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 784, 814 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 199, 1606 |
| Bse1I | ACTGG | 3 cut(s) | 193, 1502, 1780 |
| Bse3DI | GCAATG | 1 cut(s) | 1216 |
| Bse8I | GATNNNNATC | 1 cut(s) | 438 |
| BseBI | CCWGG | 2 cut(s) | 1739, 1844 |
| BseDI | CCNNGG | 4 cut(s) | 174, 637, 1036, 1738 |
| BseGI | GGATG | 2 cut(s) | 870, 1791 |
| BseJI | GATNNNNATC | 1 cut(s) | 438 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 199, 1606 |
| BseMI | GCAATG | 1 cut(s) | 1216 |
| BseMII | CTCAG | 4 cut(s) | 147, 416, 525, 759 |
| BseNI | ACTGG | 3 cut(s) | 193, 1502, 1780 |
| BseSI | GKGCMC | 1 cut(s) | 494 |
| BseXI | GCAGC | 2 cut(s) | 90, 1150 |
| BseYI | CCCAGC | 2 cut(s) | 493, 1762 |
| BsgI | GTGCAG | 1 cut(s) | 729 |
| BshFI | GGCC | 3 cut(s) | 359, 492, 1080 |
| BshNI | GGYRCC | 1 cut(s) | 1595 |
| BsiHKAI | GWGCWC | 1 cut(s) | 431 |
| BsiHKCI | CYCGRG | 1 cut(s) | 281 |
| BsiSI | CCGG | 1 cut(s) | 327 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 199, 1606 |
| BsmAI | GTCTC | 2 cut(s) | 804, 1733 |
| BsnI | GGCC | 3 cut(s) | 359, 492, 1080 |
| Bso31I | GGTCTC | 1 cut(s) | 1733 |
| BsoBI | CYCGRG | 1 cut(s) | 281 |
| Bsp120I | GGGCCC | 1 cut(s) | 490 |
| Bsp1286I | GDGCHC | 2 cut(s) | 431, 494 |
| Bsp1407I | TGTACA | 1 cut(s) | 1884 |
| Bsp143I | GATC | 5 cut(s) | 22, 203, 566, 589, 616 |
| Bsp19I | CCATGG | 1 cut(s) | 637 |
| BspACI | CCGC | 5 cut(s) | 1236, 1373, 1658, 1794, 1900 |
| BspANI | GGCC | 3 cut(s) | 359, 492, 1080 |
| BspCNI | CTCAG | 4 cut(s) | 148, 417, 526, 760 |
| BspLI | GGNNCC | 3 cut(s) | 191, 492, 1597 |
| BspPI | GGATC | 3 cut(s) | 211, 574, 597 |
| BspT107I | GGYRCC | 1 cut(s) | 1595 |
| BspTI | CTTAAG | 1 cut(s) | 1808 |
| BspTNI | GGTCTC | 1 cut(s) | 1733 |
| BsrDI | GCAATG | 1 cut(s) | 1216 |
| BsrGI | TGTACA | 1 cut(s) | 1884 |
| BsrI | ACTGG | 3 cut(s) | 193, 1502, 1780 |
| BssECI | CCNNGG | 4 cut(s) | 174, 637, 1036, 1738 |
| BssMI | GATC | 5 cut(s) | 22, 203, 566, 589, 616 |
| BssT1I | CCWWGG | 3 cut(s) | 174, 637, 1036 |
| Bst2UI | CCWGG | 2 cut(s) | 1739, 1844 |
| Bst4CI | ACNGT | 3 cut(s) | 1013, 1116, 1196 |
| BstAFI | CTTAAG | 1 cut(s) | 1808 |
| BstAUI | TGTACA | 1 cut(s) | 1884 |
| BstBAI | YACGTR | 1 cut(s) | 738 |
| BstC8I | GCNNGC | 2 cut(s) | 1211, 1531 |
| BstDEI | CTNAG | 7 cut(s) | 82, 156, 425, 534, 768, 828, 1544 |
| BstDSI | CCRYGG | 1 cut(s) | 637 |
| BstF5I | GGATG | 2 cut(s) | 870, 1791 |
| BstH2I | RGCGCY | 1 cut(s) | 258 |
| BstHHI | GCGC | 1 cut(s) | 257 |
| BstKTI | GATC | 5 cut(s) | 25, 206, 569, 592, 619 |
| BstMAI | GTCTC | 2 cut(s) | 804, 1733 |
| BstMBI | GATC | 5 cut(s) | 22, 203, 566, 589, 616 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 936, 1694 |
| BstNI | CCWGG | 2 cut(s) | 1739, 1844 |
| BstNSI | RCATGY | 1 cut(s) | 763 |
| BstSCI | CCNGG | 3 cut(s) | 326, 1737, 1842 |
| BstSFI | CTRYAG | 1 cut(s) | 944 |
| BstSLI | GKGCMC | 1 cut(s) | 494 |
| BstV1I | GCAGC | 2 cut(s) | 90, 1150 |
| BstV2I | GAAGAC | 4 cut(s) | 126, 681, 771, 1455 |
| BstX2I | RGATCY | 3 cut(s) | 22, 589, 616 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 638 |
| BstYI | RGATCY | 3 cut(s) | 22, 589, 616 |
| BsuI | GTATCC | 1 cut(s) | 45 |
| BsuRI | GGCC | 3 cut(s) | 359, 492, 1080 |
| BtgI | CCRYGG | 1 cut(s) | 637 |
| BtsCI | GGATG | 2 cut(s) | 870, 1791 |
| BtsI | GCAGTG | 1 cut(s) | 717 |
| BtsIMutI | CAGTG | 3 cut(s) | 717, 1759, 1773 |
| Cac8I | GCNNGC | 2 cut(s) | 1211, 1531 |
| CfoI | GCGC | 1 cut(s) | 257 |
| Cfr13I | GGNCC | 5 cut(s) | 358, 490, 491, 1180, 1652 |
| Csp6I | GTAC | 3 cut(s) | 278, 739, 1885 |
| CviAII | CATG | 8 cut(s) | 638, 760, 971, 1071, 1172, 1462, 1640, 1715 |
| CviQI | GTAC | 3 cut(s) | 278, 739, 1885 |
| DdeI | CTNAG | 7 cut(s) | 82, 156, 425, 534, 768, 828, 1544 |
| DpnI | GATC | 5 cut(s) | 24, 205, 568, 591, 618 |
| DpnII | GATC | 5 cut(s) | 22, 203, 566, 589, 616 |
| EaeI | YGGCCR | 1 cut(s) | 1078 |
| EciI | GGCGGA | 1 cut(s) | 1362 |
| Ecl136II | GAGCTC | 1 cut(s) | 429 |
| Eco130I | CCWWGG | 3 cut(s) | 174, 637, 1036 |
| Eco24I | GRGCYC | 2 cut(s) | 431, 494 |
| Eco31I | GGTCTC | 1 cut(s) | 1733 |
| Eco32I | GATATC | 1 cut(s) | 1503 |
| Eco47I | GGWCC | 2 cut(s) | 1180, 1652 |
| Eco53kI | GAGCTC | 1 cut(s) | 429 |
| Eco57I | CTGAAG | 3 cut(s) | 138, 1467, 1589 |
| Eco88I | CYCGRG | 1 cut(s) | 281 |
| EcoICRI | GAGCTC | 1 cut(s) | 429 |
| EcoRI | GAATTC | 2 cut(s) | 331, 1584 |
| EcoRII | CCWGG | 2 cut(s) | 1737, 1842 |
| EcoRV | GATATC | 1 cut(s) | 1503 |
| EcoT14I | CCWWGG | 3 cut(s) | 174, 637, 1036 |
| EcoT38I | GRGCYC | 2 cut(s) | 431, 494 |
| ErhI | CCWWGG | 3 cut(s) | 174, 637, 1036 |
| FaeI | CATG | 8 cut(s) | 641, 763, 974, 1074, 1175, 1465, 1643, 1718 |
| FatI | CATG | 8 cut(s) | 637, 759, 970, 1070, 1171, 1461, 1639, 1714 |
| Fnu4HI | GCNGC | 3 cut(s) | 79, 1164, 1795 |
| FokI | GGATG | 2 cut(s) | 877, 1798 |
| FriOI | GRGCYC | 2 cut(s) | 431, 494 |
| Fsp4HI | GCNGC | 3 cut(s) | 79, 1164, 1795 |
| FspBI | CTAG | 6 cut(s) | 11, 20, 303, 459, 1160, 1419 |
| GlaI | GCGC | 1 cut(s) | 256 |
| GluI | GCNGC | 3 cut(s) | 79, 1164, 1795 |
| GsaI | CCCAGC | 2 cut(s) | 497, 1766 |
| HaeII | RGCGCY | 1 cut(s) | 258 |
| HaeIII | GGCC | 3 cut(s) | 359, 492, 1080 |
| HapII | CCGG | 1 cut(s) | 327 |
| HhaI | GCGC | 1 cut(s) | 257 |
| Hin1II | CATG | 8 cut(s) | 641, 763, 974, 1074, 1175, 1465, 1643, 1718 |
| Hin6I | GCGC | 1 cut(s) | 255 |
| HinP1I | GCGC | 1 cut(s) | 255 |
| HincII | GTYRAC | 4 cut(s) | 93, 682, 820, 1033 |
| HindII | GTYRAC | 4 cut(s) | 93, 682, 820, 1033 |
| HindIII | AAGCTT | 3 cut(s) | 61, 667, 1439 |
| HpaI | GTTAAC | 1 cut(s) | 682 |
| HpaII | CCGG | 1 cut(s) | 327 |
| HphI | GGTGA | 1 cut(s) | 1668 |
| Hpy166II | GTNNAC | 9 cut(s) | 93, 383, 682, 820, 968, 1033, 1652, 1802, 1885 |
| Hpy188I | TCNGA | 6 cut(s) | 118, 403, 433, 769, 1410, 1838 |
| Hpy8I | GTNNAC | 9 cut(s) | 93, 383, 682, 820, 968, 1033, 1652, 1802, 1885 |
| HpyAV | CCTTC | 4 cut(s) | 38, 793, 1008, 1153 |
| HpyCH4III | ACNGT | 3 cut(s) | 1013, 1116, 1196 |
| HpyCH4IV | ACGT | 2 cut(s) | 223, 737 |
| HpyCH4V | TGCA | 6 cut(s) | 78, 710, 791, 868, 1625, 1853 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 936, 1694 |
| HpyF3I | CTNAG | 7 cut(s) | 82, 156, 425, 534, 768, 828, 1544 |
| HpySE526I | ACGT | 2 cut(s) | 223, 737 |
| Hsp92II | CATG | 8 cut(s) | 641, 763, 974, 1074, 1175, 1465, 1643, 1718 |
| HspAI | GCGC | 1 cut(s) | 255 |
| KspAI | GTTAAC | 1 cut(s) | 682 |
| Kzo9I | GATC | 5 cut(s) | 22, 203, 566, 589, 616 |
| LmnI | GCTCC | 2 cut(s) | 847, 1685 |
| Lsp1109I | GCAGC | 2 cut(s) | 90, 1150 |
| LweI | GCATC | 1 cut(s) | 855 |
| MaeI | CTAG | 6 cut(s) | 11, 20, 303, 459, 1160, 1419 |
| MaeII | ACGT | 2 cut(s) | 223, 737 |
| MaeIII | GTNAC | 3 cut(s) | 13, 1457, 1771 |
| MalI | GATC | 5 cut(s) | 24, 205, 568, 591, 618 |
| MboI | GATC | 5 cut(s) | 22, 203, 566, 589, 616 |
| MboII | GAAGA | 6 cut(s) | 131, 681, 771, 1460, 1477, 1593 |
| MfeI | CAATTG | 1 cut(s) | 110 |
| MflI | RGATCY | 3 cut(s) | 22, 589, 616 |
| MhlI | GDGCHC | 2 cut(s) | 431, 494 |
| MlsI | TGGCCA | 1 cut(s) | 1080 |
| MluNI | TGGCCA | 1 cut(s) | 1080 |
| MlyI | GAGTC | 2 cut(s) | 125, 403 |
| MmeI | TCCRAC | 2 cut(s) | 842, 1452 |
| MnlI | CCTC | 7 cut(s) | 121, 349, 383, 487, 1193, 1199, 1896 |
| Mox20I | TGGCCA | 1 cut(s) | 1080 |
| MscI | TGGCCA | 1 cut(s) | 1080 |
| MseI | TTAA | 8 cut(s) | 138, 236, 681, 809, 1128, 1535, 1614, 1809 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1466 |
| Msp20I | TGGCCA | 1 cut(s) | 1080 |
| MspA1I | CMGCKG | 1 cut(s) | 1660 |
| MspCI | CTTAAG | 1 cut(s) | 1808 |
| MspI | CCGG | 1 cut(s) | 327 |
| MspR9I | CCNGG | 3 cut(s) | 328, 1739, 1844 |
| MunI | CAATTG | 1 cut(s) | 110 |
| MvaI | CCWGG | 2 cut(s) | 1739, 1844 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 936, 1694 |
| NciI | CCSGG | 1 cut(s) | 328 |
| NcoI | CCATGG | 1 cut(s) | 637 |
| NdeII | GATC | 5 cut(s) | 22, 203, 566, 589, 616 |
| NlaIII | CATG | 8 cut(s) | 641, 763, 974, 1074, 1175, 1465, 1643, 1718 |
| NlaIV | GGNNCC | 3 cut(s) | 191, 492, 1597 |
| NmuCI | GTSAC | 1 cut(s) | 1771 |
| NspI | RCATGY | 1 cut(s) | 763 |
| PciI | ACATGT | 1 cut(s) | 759 |
| PfeI | GAWTC | 9 cut(s) | 439, 511, 652, 1102, 1134, 1475, 1743, 1767, 1839 |
| PfoI | TCCNGGA | 2 cut(s) | 326, 1842 |
| PkrI | GCNGC | 3 cut(s) | 80, 1165, 1796 |
| PleI | GAGTC | 2 cut(s) | 125, 402 |
| PpsI | GAGTC | 2 cut(s) | 125, 402 |
| Ppu21I | YACGTR | 1 cut(s) | 738 |
| PscI | ACATGT | 1 cut(s) | 759 |
| Psp124BI | GAGCTC | 1 cut(s) | 431 |
| Psp6I | CCWGG | 2 cut(s) | 1737, 1842 |
| PspFI | CCCAGC | 2 cut(s) | 493, 1762 |
| PspGI | CCWGG | 2 cut(s) | 1737, 1842 |
| PspN4I | GGNNCC | 3 cut(s) | 191, 492, 1597 |
| PspOMI | GGGCCC | 1 cut(s) | 490 |
| PspPI | GGNCC | 5 cut(s) | 358, 490, 491, 1180, 1652 |
| PsuI | RGATCY | 3 cut(s) | 22, 589, 616 |
| RsaI | GTAC | 3 cut(s) | 279, 740, 1886 |
| RsaNI | GTAC | 3 cut(s) | 278, 739, 1885 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1466 |
| SacI | GAGCTC | 1 cut(s) | 431 |
| SaqAI | TTAA | 8 cut(s) | 138, 236, 681, 809, 1128, 1535, 1614, 1809 |
| SatI | GCNGC | 3 cut(s) | 79, 1164, 1795 |
| Sau3AI | GATC | 5 cut(s) | 22, 203, 566, 589, 616 |
| Sau96I | GGNCC | 5 cut(s) | 358, 490, 491, 1180, 1652 |
| SchI | GAGTC | 2 cut(s) | 125, 403 |
| ScrFI | CCNGG | 3 cut(s) | 328, 1739, 1844 |
| SduI | GDGCHC | 2 cut(s) | 431, 494 |
| SfaNI | GCATC | 1 cut(s) | 855 |
| SfcI | CTRYAG | 1 cut(s) | 944 |
| SinI | GGWCC | 2 cut(s) | 1180, 1652 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1466 |
| SmlI | CTYRAG | 4 cut(s) | 670, 1489, 1692, 1808 |
| SmoI | CTYRAG | 4 cut(s) | 670, 1489, 1692, 1808 |
| SpeI | ACTAGT | 1 cut(s) | 458 |
| SsiI | CCGC | 5 cut(s) | 1236, 1373, 1658, 1794, 1900 |
| SspI | AATATT | 1 cut(s) | 1255 |
| SspMI | CTAG | 6 cut(s) | 11, 20, 303, 459, 1160, 1419 |
| SstI | GAGCTC | 1 cut(s) | 431 |
| StyD4I | CCNGG | 3 cut(s) | 326, 1737, 1842 |
| StyI | CCWWGG | 3 cut(s) | 174, 637, 1036 |
| TaaI | ACNGT | 3 cut(s) | 1013, 1116, 1196 |
| TaiI | ACGT | 2 cut(s) | 226, 740 |
| TaqI | TCGA | 2 cut(s) | 662, 752 |
| TatI | WGTACW | 1 cut(s) | 1884 |
| TauI | GCSGC | 1 cut(s) | 1797 |
| TfiI | GAWTC | 9 cut(s) | 439, 511, 652, 1102, 1134, 1475, 1743, 1767, 1839 |
| Tru1I | TTAA | 8 cut(s) | 138, 236, 681, 809, 1128, 1535, 1614, 1809 |
| Tru9I | TTAA | 8 cut(s) | 138, 236, 681, 809, 1128, 1535, 1614, 1809 |
| TscAI | CASTG | 3 cut(s) | 717, 1759, 1780 |
| TseFI | GTSAC | 1 cut(s) | 1771 |
| TseI | GCWGC | 2 cut(s) | 78, 1163 |
| Tsp45I | GTSAC | 1 cut(s) | 1771 |
| TspDTI | ATGAA | 4 cut(s) | 641, 1160, 1281, 1478 |
| TspRI | CASTG | 3 cut(s) | 717, 1759, 1780 |
| Vha464I | CTTAAG | 1 cut(s) | 1808 |
| VpaK11BI | GGWCC | 2 cut(s) | 1180, 1652 |
| XapI | RAATTY | 6 cut(s) | 70, 331, 877, 1368, 1512, 1584 |
| XbaI | TCTAGA | 1 cut(s) | 1418 |
| XceI | RCATGY | 1 cut(s) | 763 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 1024, 1174 |
| XspI | CTAG | 6 cut(s) | 11, 20, 303, 459, 1160, 1419 |