RchiOBHm_Chr7g0206851

Leucine Rich repeat

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Reverse (-)
24384246 .. 24387582
3337 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ18514

Sequence Viewer

Length: 3204 bp
ATGTTTTTCAGTATAATGAGTGGTGGGTCTATGCATTCTGGTTTGGTTGGGCTTGTGTGCCTGGCCATTGCCTCTGCTATTTGTTGTTCAAATGTTGGAAGCTCTAACAACATCATGTGCTTGGAGAGTGAAAGGCATGCTCTTCTCCAGTTCAAACAAGGCCTTGTGGATGACTCCAATGCTCTTGCCTCTTGGAAAAGTGAGAAAGCTTGCTGCAAGTGGAGAGGAATAGCATGCAACAACCAAACAGGTCATGTCATCATTCTAGATCTCTCTTATAGTTATTACGATTCCACTAAATGGAGAGGTGAAATTAGTCCTTCACTACTTGAATTGCCATATCTAAATTACTTGGACCTCAGTTATAATGATTTTGGAGGAATGATCATTCCGAAGTTCATTGGTTCTTTGAGTCAATTGAAAGAGCTCAAACTTGCAGATGCTAATTTCAGTGGACCTGTTCCTCCCCAACTTGGAAACCTCTCTAATTTGCACACTCTTGATCTTTCCTCCAATGATTTTGAAGGAATGATGATTCCCAAATTCATTGGCTCTCTGAGTCAATTGAAAGAACTCAAACTTGCAGATGCTAATTTCAGTGGACCTGTTCCTCCCCAACTTGGAAACCTCTCTAATTTGCACACTCTTGATCTTTCCTCCAATGATTTTGAAGGAATGATGATTCCCAAATTCATTGGCTCTCTGAGTCAATTGAAAGAACTCAATCTTGCAGATGCTAATTTCAGTGGACCTGTTCCTCCCCAACTTAGAAACCTCTCTAATTTGCACACTCTTGATCTTTCCTCCAATGATTTTGAAGGAAAGATGATTCCCAAATTCATTGGCTCTCTGAGTCAATTGAAAGAACTCAATCTTGCATATGCTAAATTCAGTGGACCTGTTCCTCCCCAACTTGGAAACCTCTCTAATTTGCACACTCTTGATCTTCCCTCCAATGATTTTGAAGGAATGATGATTCCCAAATTCATTGGCTTTCTGAGTCAATTGAAAGAACTCAAACTTGCAGAAGCTAATTTCAGTGGACCTGTTCCTCCCCAACTTGAAAACCTCACTAATTTGCACACTCTTGATCTTTCCTCCAATGATTTTGAAGGAATGATGATTCCCAAATTCATTGGCTCTCTGGGTCAATTGAAAGAACTCAAACTTGCAGAAGCTAATTTCAGTGGACCTGTTCCTCCCCAACTTGGAAACCTCTCTAATTTGCACACTCTTGATCTTTACGGTAACCAAGTTGTTAGTTCAGAAAATCTTGAGTGGTTATCTCATCTTTCTTCCTTGAGATACCTGAACATGTCATGGCTGAATTTGTCTGAGGCTGTGAATTGGCCAGAATCTTTGAGCAAGCTCACTTTACTGAGAGAGCTCGAGTTATCCGAGTGTAACCTTCCTGATGTCAATCCAAGATCACTTGCCTTTATTAATTCTTCCACCTCTCTTCAACTCCTTGACCTCTCTTATAACTCTCTGAATTCTTCAATATTTAATTGGATAGCCAATGTCAGCAGCAACTTTGTCCATATTGATCTCTCTTCCAATCAACTTGAAGGTGGGATACCAAAAGGCTTTCAAAACTTATGCAGCTTAGAGTCGTTGACCAATTGTCTGAAAACATTGAGGACTCTGTTAAAACCTTGTCTTGTGCTGAGAACACACTTGAGACCTTGGCCTTGGCAGGGAACCAGTTTTGGGGATCGTTGCCGGATTTCACACGCCCACTTTTTGAACCTCTCTCGTTTACAGACTTTGGATATTTCTGGTAATCGTTTCTCTATCAACCTAAGCTCTGATTGGAATCCACCATTTCAGCTTACTGGTGAGTTAGATATGTCCTCTTGCAAGGTGGGCCCAGCTTTTCCCAAGTGGATTCTAACGCAGACAAATCTTTTTAGGCTTTCTCTCTCTAATGCTGGACTATCAGGATCATTACCTCATAAGTTTTGGGATCTATTTTCTGGCTTAGAGTGGTTAGATCTCTCTATGAACCAAATCCATGGGAAACTACCGAATCTGTCATTGACAAGTTTAAGTGAAGTTGGCTTGTCTTCTAATCTATTTATATCGCGTTGCCATCATTTCCTCCTATGCTCAGGTATTTGTATCTCGCGCGCGAATAACAGTTTTTCAGGACCTTTGTCTTCCTTCTGTGCTCTAGGTATTTGGTATGTTGACATTTCTAAGAACCTATTGTCTCGGGAGCTTCCTAATTGTTGGATGCAATGTCAAGAATTGCAACTGTTGAATTTGGGAAAGAATAAATTATCTGGAAAAATACCAAGCTGGTTAGGCAATCTACAGTCAATTGGGATATTGCGTTTACATGATAACAACTTTTCAGGAGAATTGCCTTCTTTAGAGAACTCTACCCAATTATTGATGGTTGACCTCGGCAACAATAAATTGTCGGGAAAGATACCAACATGGATTGGCCAAAGCCTACCAAACTTGGTGATTCTACGCTTACGGTCAAATGAGTTTAATGGAATCATACCCTTCTCCCTGTGCAGTCTAGCTGCCATTAATGTTTTGGACCTCTCTCACAACAATATTTCAGGAAGCTTGCCGCATTGCTTGAATAACATTACCGCTTTGGCTCATGATACTGGAGGAAGTAGAAGTTTTACTGTGGAACTTGTGTGGAAAGGAATAGAAATTGAGTTTGGGAAAAATCTTGATGGTATGAGAAGCATTGACATTTCAAGCAACTATTTGATTGGGGAAATTCCGCCTAGTATAGCAAGTATGACAGAGTTGAAATCTCTGAACCTGTCTGGAAACAAATTGACGGGAAAGCTTCCTAAAGACTTTGGTAACATGAAGATGTTGGAATCTCTTGATTTGTCAAGAAACCGGATATCTGGTCAAATTCCTACAAGTTTTGCGAGCTTAAACTTTCTTAGTGTCTTGGACTTGTCACACAACAACTTGTCAGGAAGAATTCCATCAGGCACCCAACTTCAGGGCTTTAATGCTTCTCAATATATGGGAAATCGTGGACTTTGTGGACCACCGCTAACACAAAGTTGTCCAGGAGAAGGAACAGTTCAAGATGATGGAATCACGAGAGGAACTGAAATTGATAACAAAGAACAGGTTAGTGATGGTCTCATAAACCTTGGATTCTTTATTAGTGCAGTGCTGGGATTTGTCACTGGATTTTGGATGGTCTGCGGCAGTTTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1067

Amino Acids

116.96

Weight (kDa)

5.88

Isoelectric Point (pI)

35.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 42 - 80 5.1e-12 Leucine rich repeat N-terminal domain
LRR_14 PF23598 104 - 242 5.3e-14 Leucine-rich repeat region
LRR_14 PF23598 205 - 339 2.9e-12 Leucine-rich repeat region
LRR_14 PF23598 326 - 538 3.6e-16 Leucine-rich repeat region
LRR_8 PF13855 901 - 959 2e-10 Leucine rich repeat
LRR_14 PF23598 919 - 982 8.3e-06 Leucine-rich repeat region
LRR_8 PF13855 943 - 983 1.8e-06 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000028)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g45420 FvH4_4g14031 FvH4_5g20780 FvH4_6g28530 FvH4_7g14020 FvH4_7g14030 FvH4_7g14040 FvH4_7g14050 FvH4_7g14060 FvH4_7g14070 FvH4_7g14090 FvH4_7g14110 FvH4_7g14140 FvH4_7g14450
malus_domestica MD00G1189100.v1.1 MD01G1018600.v1.1 MD01G1053800.v1.1 MD01G1053900.v1.1 MD01G1054000.v1.1 MD01G1054100.v1.1 MD01G1056700.v1.1 MD01G1057000.v1.1 MD01G1057300.v1.1 MD01G1057400.v1.1 MD01G1061600.v1.1 MD01G1061800.v1.1 MD01G1061900.v1.1 MD01G1062000.v1.1 MD01G1062400.v1.1 MD01G1062500.v1.1 MD01G1063200.v1.1 MD01G1063300.v1.1 MD01G1063400.v1.1 MD01G1063700.v1.1 MD01G1063900.v1.1 MD01G1064200.v1.1 MD01G1064300.v1.1 MD01G1064400.v1.1 MD01G1064600.v1.1 MD01G1064700.v1.1 MD01G1181100.v1.1 MD01G1212300.v1.1 MD01G1212500.v1.1 MD01G1212600.v1.1 MD02G1271900.v1.1 MD07G1136500.v1.1 MD07G1139300.v1.1 MD07G1141200.v1.1 MD07G1144700.v1.1 MD08G1144200.v1.1 MD14G1186300.v1.1 MD14G1186500.v1.1 MD14G1186700.v1.1 MD14G1186800.v1.1 MD15G1351300.v1.1 MD15G1439500.v1.1
prunus_persica Prupe.1G067000_v2.0.a1 Prupe.2G077400_v2.0.a1 Prupe.2G077700_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078100_v2.0.a1 Prupe.2G078600_v2.0.a1 Prupe.2G078800_v2.0.a1 Prupe.2G099600_v2.0.a1 Prupe.2G099700_v2.0.a1 Prupe.2G155100_v2.0.a1 Prupe.2G155500_v2.0.a1 Prupe.2G155600_v2.0.a1 Prupe.2G155800_v2.0.a1 Prupe.2G155900_v2.0.a1 Prupe.2G156100_v2.0.a1 Prupe.2G166100_v2.0.a1 Prupe.2G166300_v2.0.a1 Prupe.2G167500_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167600_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G167700_v2.0.a1 Prupe.2G168400_v2.0.a1 Prupe.2G168700_v2.0.a1 Prupe.2G168800_v2.0.a1 Prupe.2G169000_v2.0.a1 Prupe.2G169100_v2.0.a1 Prupe.2G169200_v2.0.a1 Prupe.2G169500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G171500_v2.0.a1 Prupe.2G172300_v2.0.a1 Prupe.2G304800_v2.0.a1 Prupe.4G264800_v2.0.a1 Prupe.4G265000_v2.0.a1 Prupe.5G051900_v2.0.a1 Prupe.5G052000_v2.0.a1
pyrus_communis pycom01g08380 pycom01g08430 pycom01g08490 pycom01g08520 pycom01g08540 pycom01g08550 pycom01g08600 pycom01g08630 pycom01g08660 pycom01g08720 pycom01g09180 pycom01g09200 pycom01g09210 pycom01g09270 pycom01g09280 pycom01g09300 pycom01g09380 pycom01g19110 pycom01g22260 pycom01g22310 pycom01g22330 pycom01g22350 pycom01g22360 pycom02g23250 pycom07g13420 pycom07g13670 pycom07g13900 pycom07g13910 pycom07g13960 pycom07g13970 pycom07g25680 pycom11g22830
rosa_chinensis RchiOBHm_Chr0c22g0500431 RchiOBHm_Chr0c22g0500441 RchiOBHm_Chr0c22g0500561 RchiOBHm_Chr0c22g0500571 RchiOBHm_Chr0c22g0500611 RchiOBHm_Chr0c22g0500621 RchiOBHm_Chr0c22g0500631 RchiOBHm_Chr0c22g0500681 RchiOBHm_Chr1g0348221 RchiOBHm_Chr1g0348251 RchiOBHm_Chr1g0352861 RchiOBHm_Chr1g0352871 RchiOBHm_Chr1g0352891 RchiOBHm_Chr1g0352901 RchiOBHm_Chr1g0354671 RchiOBHm_Chr1g0354701 RchiOBHm_Chr1g0354711 RchiOBHm_Chr1g0354751 RchiOBHm_Chr1g0354761 RchiOBHm_Chr1g0354841 RchiOBHm_Chr1g0354851 RchiOBHm_Chr1g0354881 RchiOBHm_Chr1g0354971 RchiOBHm_Chr1g0354981 RchiOBHm_Chr1g0354991 RchiOBHm_Chr1g0355001 RchiOBHm_Chr1g0355011 RchiOBHm_Chr1g0355021 RchiOBHm_Chr1g0355861 RchiOBHm_Chr1g0379671 RchiOBHm_Chr1g0379681 RchiOBHm_Chr2g0096591 RchiOBHm_Chr2g0132821 RchiOBHm_Chr3g0454901 RchiOBHm_Chr3g0472711 RchiOBHm_Chr4g0400791 RchiOBHm_Chr5g0069481 RchiOBHm_Chr5g0069511 RchiOBHm_Chr5g0069551 RchiOBHm_Chr6g0254651 RchiOBHm_Chr6g0259721 RchiOBHm_Chr7g0205911 RchiOBHm_Chr7g0206401 RchiOBHm_Chr7g0206571 RchiOBHm_Chr7g0206581 RchiOBHm_Chr7g0206621 RchiOBHm_Chr7g0206631 RchiOBHm_Chr7g0206641 RchiOBHm_Chr7g0206681 RchiOBHm_Chr7g0206691 RchiOBHm_Chr7g0206751 RchiOBHm_Chr7g0206761 RchiOBHm_Chr7g0206851 RchiOBHm_Chr7g0206911 RchiOBHm_Chr7g0206921 RchiOBHm_Chr7g0207001 RchiOBHm_Chr7g0207011 RchiOBHm_Chr7g0207031 RchiOBHm_Chr7g0207101 RchiOBHm_Chr7g0207161 RchiOBHm_Chr7g0207201 RchiOBHm_Chr7g0207271 RchiOBHm_Chr7g0207301 RchiOBHm_Chr7g0207311 RchiOBHm_Chr7g0207421 RchiOBHm_Chr7g0207481 RchiOBHm_Chr7g0207491 RchiOBHm_Chr7g0207501 RchiOBHm_Chr7g0207521 RchiOBHm_Chr7g0207531 RchiOBHm_Chr7g0207561 RchiOBHm_Chr7g0207571 RchiOBHm_Chr7g0207581 RchiOBHm_Chr7g0207601 RchiOBHm_Chr7g0207621 RchiOBHm_Chr7g0207631 RchiOBHm_Chr7g0207651 RchiOBHm_Chr7g0207661 RchiOBHm_Chr7g0207711 RchiOBHm_Chr7g0207761 RchiOBHm_Chr7g0207801 RchiOBHm_Chr7g0208821 RchiOBHm_Chr7g0208831 RchiOBHm_Chr7g0208841 RchiOBHm_Chr7g0213601 RchiOBHm_Chr7g0215981 RchiOBHm_Chr7g0216021
rosa_laevigata RLG00000003193 RLG00000003194 RLG00000003287 RLG00000003288 RLG00000003289 RLG00000003293 RLG00000003294 RLG00000003295 RLG00000003297 RLG00000003299 RLG00000003301 RLG00000003327 RLG00000003347 RLG00000016653 RLG00000018642 RLG00000018643 RLG00000019285 RLG00000022542 RLG00000026368 RLG00000026371 RLG00000028124 RLG00000028125 RLG00000028183 RLG00000028184 RLG00000028185 RLG00000028188 RLG00000028673 RLG00000029267 RLG00000029325 RLG00000029674 RLG00000032883 RLG00000036055 RLG00000036058 RLG00000036065 RLG00000036068 RLG00000036071 RLG00000036072 RLG00000036075 RLG00000036076
rosa_multiflora Rmu_co8250183.1_g000001 Rmu_co8271981.1_g000001 Rmu_co8410829.1_g000001 Rmu_co8432879.1_g000001 Rmu_co8441941.1_g000001 Rmu_sc0000076.1_g000031 Rmu_sc0000738.1_g000038 Rmu_sc0000848.1_g000003 Rmu_sc0000848.1_g000014 Rmu_sc0000848.1_g000015 Rmu_sc0000848.1_g000016 Rmu_sc0001264.1_g000001 Rmu_sc0002284.1_g000018 Rmu_sc0002356.1_g000011 Rmu_sc0003020.1_g000003 Rmu_sc0003115.1_g000001 Rmu_sc0003115.1_g000002 Rmu_sc0003115.1_g000003 Rmu_sc0003115.1_g000004 Rmu_sc0003115.1_g000005 Rmu_sc0003115.1_g000008 Rmu_sc0003115.1_g000010 Rmu_sc0003115.1_g000011 Rmu_sc0003115.1_g000014 Rmu_sc0003565.1_g000002 Rmu_sc0003652.1_g000013 Rmu_sc0003652.1_g000015 Rmu_sc0003652.1_g000016 Rmu_sc0003652.1_g000019 Rmu_sc0003940.1_g000001 Rmu_sc0003940.1_g000004 Rmu_sc0003940.1_g000009 Rmu_sc0004084.1_g000010 Rmu_sc0004705.1_g000021 Rmu_sc0004972.1_g000007 Rmu_sc0004987.1_g000002 Rmu_sc0004987.1_g000006 Rmu_sc0005065.1_g000018 Rmu_sc0005065.1_g000029 Rmu_sc0005391.1_g000002 Rmu_sc0005633.1_g000003 Rmu_sc0005633.1_g000008 Rmu_sc0006632.1_g000014 Rmu_sc0006632.1_g000018 Rmu_sc0006681.1_g000010 Rmu_sc0006681.1_g000011 Rmu_sc0006733.1_g000003 Rmu_sc0007385.1_g000005 Rmu_sc0007385.1_g000007 Rmu_sc0007385.1_g000009 Rmu_sc0007385.1_g000016 Rmu_sc0007645.1_g000002 Rmu_sc0007645.1_g000003 Rmu_sc0007645.1_g000022 Rmu_sc0007828.1_g000008 Rmu_sc0008509.1_g000003 Rmu_sc0008509.1_g000015 Rmu_sc0008509.1_g000016 Rmu_sc0008509.1_g000020 Rmu_sc0008509.1_g000030 Rmu_sc0008509.1_g000041 Rmu_sc0008756.1_g000001 Rmu_sc0008756.1_g000003 Rmu_sc0013028.1_g000002 Rmu_sc0013028.1_g000003 Rmu_sc0013028.1_g000005 Rmu_sc0013160.1_g000001 Rmu_sc0014454.1_g000009 Rmu_sc0014455.1_g000007 Rmu_sc0014659.1_g000004 Rmu_sc0017798.1_g000002 Rmu_sc0017798.1_g000004 Rmu_sc0029608.1_g000001 Rmu_sc0037861.1_g000001 Rmu_sc0038750.1_g000001 Rmu_sc0042995.1_g000001 Rmu_ssc0000161.1_g000017
rosa_roxburghii Rroxscaffold_1G00009180 Rroxscaffold_1G00009190 Rroxscaffold_1G00011450 Rroxscaffold_1G00011480 Rroxscaffold_2G00111660 Rroxscaffold_2G00113570 Rroxscaffold_2G00122140 Rroxscaffold_3G00243730 Rroxscaffold_3G00245750 Rroxscaffold_3G00245760 Rroxscaffold_3G00250220 Rroxscaffold_3G00251160 Rroxscaffold_3G00251270 Rroxscaffold_3G00251280 Rroxscaffold_3G00251300 Rroxscaffold_3G00251340 Rroxscaffold_3G00251350 Rroxscaffold_3G00251390 Rroxscaffold_3G00251400 Rroxscaffold_3G00251560 Rroxscaffold_3G00251570 Rroxscaffold_3G00251870 Rroxscaffold_3G00252200 Rroxscaffold_3G00252210 Rroxscaffold_4G00279970 Rroxscaffold_4G00299970 Rroxscaffold_4G00300760 Rroxscaffold_4G00300780 Rroxscaffold_4G00300810 Rroxscaffold_4G00300850 Rroxscaffold_4G00307080 Rroxscaffold_4G00307100 Rroxscaffold_4G00313990 Rroxscaffold_6G00405080
rosa_rugosa Rorug01G0193600 Rorug01G0193700 Rorug01G0243800 Rorug01G0244000 Rorug01G0244000 Rorug01G0244400 Rorug01G0414300.1 Rorug01G0414500 Rorug01G0414600 Rorug02G0235600 Rorug02G0307900 Rorug02G0583100 Rorug02G0583200 Rorug02G0583300 Rorug05G0398000 Rorug05G0398100 Rorug05G0398200 Rorug05G0580300 Rorug05G0590300 Rorug06G0116000 Rorug06G0116100 Rorug07G0096800 Rorug07G0097100.1 Rorug07G0097200 Rorug07G0098600 Rorug07G0098600 Rorug07G0098700 Rorug07G0099100 Rorug07G0106100 Rorug07G0106200 Rorug07G0106200 Rorug07G0106300 Rorug07G0157600 Rorug07G0157700 Rorug07G0157700 Rorug07G0157800
rosa_samantha Rh1AG255500 Rh1AG256700 Rh1BG225800 Rh1BG226200 Rh1BG230000 Rh1CG195300 Rh1CG238400 Rh1CG238500 Rh1CG238900 Rh1CG239000 Rh1CG239300 Rh1CG239400 Rh1CG239800 Rh1CG240000 Rh1CG240200 Rh1CG240300 Rh1CG244300 Rh1CG406900 Rh1CG407300 Rh1CG407400 Rh2CG343600 Rh2DG383200 Rh3BG205900 Rh4AG404400 Rh4BG415500 Rh5AG455200 Rh5AG455600 Rh5CG497000 Rh5CG497200 Rh7AG228800 Rh7AG230400 Rh7AG230800 Rh7AG231200 Rh7AG231600 Rh7AG231800 Rh7AG232100 Rh7AG241600 Rh7BG236200 Rh7CG238200 Rh7CG239100 Rh7CG243400 Rh7CG244900
rosa_wichuraiana Rw0G023040 Rw1G017780 Rw1G022320 Rw1G022340 Rw1G022410 Rw1G022420 Rw1G022440 Rw1G022460 Rw1G022490 Rw1G022500 Rw1G022530 Rw1G022550 Rw1G022560 Rw1G022600 Rw1G023060 Rw1G038150 Rw1G038160 Rw2G008210 Rw2G022350 Rw2G029290 Rw4G015050 Rw4G019850 Rw5G024060 Rw5G042460 Rw7G019160 Rw7G019460 Rw7G019690 Rw7G019830 Rw7G019860 Rw7G019880 Rw7G019890 Rw7G019930 Rw7G019990 Rw7G020460 Rw7G025100 Rw7G025120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 366, 1482
AccB1I GGYRCC 1 cut(s) 2969
AccB7I CCANNNNNTGG 1 cut(s) 300
AccII CGCG 4 cut(s) 2086, 2128, 2130, 2132
AciI CCGC 5 cut(s) 2585, 2607, 2747, 3032, 3192
AclWI GGATC 3 cut(s) 1722, 1951, 1974
AcoI YGGCCR 3 cut(s) 63, 1349, 2449
AcuI CTGAAG 1 cut(s) 2963
AfiI CCNNNNNNNGG 9 cut(s) 300, 473, 620, 914, 1208, 1697, 1710, 2980, 3056
AflIII ACRYGT 1 cut(s) 1314
AhdI GACNNNNNGTC 1 cut(s) 1623
AjnI CCWGG 2 cut(s) 60, 3049
AjuI GAANNNNNNNTTGG 2 cut(s) 2664, 2696
Alw21I GWGCWC 3 cut(s) 429, 1389, 2173
Alw26I GTCTC 3 cut(s) 1675, 2217, 3131
AlwI GGATC 3 cut(s) 1722, 1951, 1974
Ama87I CYCGRG 2 cut(s) 1388, 2214
AoxI GGCC 6 cut(s) 63, 160, 1349, 1688, 1867, 2449
ApaI GGGCCC 1 cut(s) 1871
ApeKI GCWGC 4 cut(s) 213, 1527, 1602, 2534
AseI ATTAAT 2 cut(s) 1443, 2541
AspLEI GCGC 2 cut(s) 2130, 2132
AsuHPI GGTGA 3 cut(s) 320, 1850, 2482
AvaI CYCGRG 2 cut(s) 1388, 2214
BaeGI GKGCMC 1 cut(s) 1871
BalI TGGCCA 3 cut(s) 65, 1351, 2451
BanI GGYRCC 1 cut(s) 2969
BanII GRGCYC 3 cut(s) 429, 1389, 1871
BarI GAAGNNNNNNTAC 2 cut(s) 1560, 1592
BauI CACGAG 1 cut(s) 3082
BbsI GAAGAC 2 cut(s) 2058, 2151
Bbv12I GWGCWC 3 cut(s) 429, 1389, 2173
BbvI GCAGC 4 cut(s) 200, 1539, 1614, 2521
BccI CCATC 7 cut(s) 2100, 2392, 2690, 2971, 3068, 3116, 3178
BciT130I CCWGG 2 cut(s) 62, 3051
BciVI GTATCC 1 cut(s) 1569
BclI TGATCA 1 cut(s) 384
BcoDI GTCTC 3 cut(s) 1675, 2217, 3131
BfaI CTAG 4 cut(s) 266, 2174, 2531, 2751
BfmI CTRYAG 1 cut(s) 2315
BfuI GTATCC 1 cut(s) 1569
BglII AGATCT 2 cut(s) 268, 1993
BisI GCNGC 6 cut(s) 214, 1528, 1603, 2535, 2585, 3193
BlsI GCNGC 6 cut(s) 215, 1529, 1604, 2536, 2586, 3194
Bme1390I CCNGG 2 cut(s) 62, 3051
BmeRI GACNNNNNGTC 1 cut(s) 1623
BmeT110I CYCGRG 2 cut(s) 1388, 2214
BmiI GGNNCC 3 cut(s) 1702, 1869, 2971
BmrFI CCNGG 2 cut(s) 62, 3051
BmsI GCATC 4 cut(s) 430, 577, 724, 2226
BoxI GACNNNNGTC 1 cut(s) 2155
BpiI GAAGAC 2 cut(s) 2058, 2151
BpmI CTGGAG 2 cut(s) 131, 2646
Bpu10I CCTNAGC 2 cut(s) 1802, 2110
BpuEI CTTGAG 3 cut(s) 1295, 1321, 1699
BsaBI GATNNNNATC 2 cut(s) 1419, 1815
BsaI GGTCTC 2 cut(s) 1675, 3131
BsaJI CCNNGG 5 cut(s) 1685, 1691, 2014, 2407, 3136
BsaWI WCCGGW 1 cut(s) 2871
Bsc4I CCNNNNNNNGG 9 cut(s) 300, 473, 620, 914, 1208, 1697, 1710, 2980, 3056
Bse1I ACTGG 5 cut(s) 148, 1704, 1840, 2629, 3178
Bse3DI GCAATG 3 cut(s) 66, 2246, 2587
Bse8I GATNNNNATC 2 cut(s) 1419, 1815
BseBI CCWGG 2 cut(s) 62, 3051
BseDI CCNNGG 5 cut(s) 1685, 1691, 2014, 2407, 3136
BseGI GGATG 3 cut(s) 175, 2241, 3189
BseJI GATNNNNATC 2 cut(s) 1419, 1815
BseLI CCNNNNNNNGG 9 cut(s) 300, 473, 620, 914, 1208, 1697, 1710, 2980, 3056
BseMI GCAATG 3 cut(s) 66, 2246, 2587
BseMII CTCAG 9 cut(s) 373, 548, 695, 842, 989, 1326, 1370, 1658, 2124
BseNI ACTGG 5 cut(s) 148, 1704, 1840, 2629, 3178
BsePI GCGCGC 1 cut(s) 2128
BseSI GKGCMC 1 cut(s) 1871
BseXI GCAGC 4 cut(s) 200, 1539, 1614, 2521
BseYI CCCAGC 2 cut(s) 1870, 3160
BsgI GTGCAG 2 cut(s) 2545, 3174
Bsh1236I CGCG 4 cut(s) 2086, 2128, 2130, 2132
BshFI GGCC 6 cut(s) 65, 162, 1351, 1690, 1869, 2451
BshNI GGYRCC 1 cut(s) 2969
BsiHKAI GWGCWC 3 cut(s) 429, 1389, 2173
BsiHKCI CYCGRG 2 cut(s) 1388, 2214
BsiSI CCGG 2 cut(s) 1723, 2872
BslI CCNNNNNNNGG 9 cut(s) 300, 473, 620, 914, 1208, 1697, 1710, 2980, 3056
BsmAI GTCTC 3 cut(s) 1675, 2217, 3131
BsmI GAATGC 1 cut(s) 34
BsnI GGCC 6 cut(s) 65, 162, 1351, 1690, 1869, 2451
Bso31I GGTCTC 2 cut(s) 1675, 3131
BsoBI CYCGRG 2 cut(s) 1388, 2214
Bsp120I GGGCCC 1 cut(s) 1867
Bsp1286I GDGCHC 4 cut(s) 429, 1389, 1871, 2173
Bsp19I CCATGG 1 cut(s) 2014
BspACI CCGC 5 cut(s) 2585, 2607, 2747, 3032, 3192
BspANI GGCC 6 cut(s) 65, 162, 1351, 1690, 1869, 2451
BspCNI CTCAG 9 cut(s) 372, 549, 696, 843, 990, 1327, 1371, 1659, 2123
BspFNI CGCG 4 cut(s) 2086, 2128, 2130, 2132
BspHI TCATGA 1 cut(s) 2617
BspLI GGNNCC 3 cut(s) 1702, 1869, 2971
BspPI GGATC 3 cut(s) 1722, 1951, 1974
BspQI GCTCTTC 1 cut(s) 147
BspT107I GGYRCC 1 cut(s) 2969
BspTNI GGTCTC 2 cut(s) 1675, 3131
BsrDI GCAATG 3 cut(s) 66, 2246, 2587
BsrI ACTGG 5 cut(s) 148, 1704, 1840, 2629, 3178
BssECI CCNNGG 5 cut(s) 1685, 1691, 2014, 2407, 3136
BssHII GCGCGC 1 cut(s) 2128
BssSI CACGAG 1 cut(s) 3082
BssT1I CCWWGG 4 cut(s) 1685, 1691, 2014, 3136
Bst2BI CACGAG 1 cut(s) 3082
Bst2UI CCWGG 2 cut(s) 62, 3051
Bst4CI ACNGT 7 cut(s) 1247, 2141, 2259, 2319, 2487, 2647, 3064
Bst6I CTCTTC 3 cut(s) 147, 1464, 1558
BstC8I GCNNGC 7 cut(s) 138, 211, 235, 1367, 2130, 2582, 2905
BstDSI CCRYGG 1 cut(s) 2014
BstEII GGTNACC 1 cut(s) 1247
BstF5I GGATG 3 cut(s) 175, 2241, 3189
BstFNI CGCG 4 cut(s) 2086, 2128, 2130, 2132
BstHHI GCGC 2 cut(s) 2130, 2132
BstMAI GTCTC 3 cut(s) 1675, 2217, 3131
BstMWI GCNNNNNNNGC 2 cut(s) 1866, 2307
BstNI CCWGG 2 cut(s) 62, 3051
BstNSI RCATGY 3 cut(s) 140, 237, 1318
BstPAI GACNNNNGTC 1 cut(s) 2155
BstPI GGTNACC 1 cut(s) 1247
BstSCI CCNGG 2 cut(s) 60, 3049
BstSFI CTRYAG 1 cut(s) 2315
BstSLI GKGCMC 1 cut(s) 1871
BstUI CGCG 4 cut(s) 2086, 2128, 2130, 2132
BstV1I GCAGC 4 cut(s) 200, 1539, 1614, 2521
BstV2I GAAGAC 2 cut(s) 2058, 2151
BstX2I RGATCY 3 cut(s) 268, 1966, 1993
BstXI CCANNNNNNTGG 1 cut(s) 2015
BstYI RGATCY 3 cut(s) 268, 1966, 1993
BsuI GTATCC 1 cut(s) 1569
BsuRI GGCC 6 cut(s) 65, 162, 1351, 1690, 1869, 2451
BtgI CCRYGG 1 cut(s) 2014
BtsCI GGATG 3 cut(s) 175, 2241, 3189
BtsI GCAGTG 1 cut(s) 3162
BtsIMutI CAGTG 8 cut(s) 457, 604, 751, 898, 1045, 1192, 3162, 3171
Cac8I GCNNGC 7 cut(s) 138, 211, 235, 1367, 2130, 2582, 2905
CciI TCATGA 1 cut(s) 2617
CfoI GCGC 2 cut(s) 2130, 2132
DriI GACNNNNNGTC 1 cut(s) 1623
EaeI YGGCCR 3 cut(s) 63, 1349, 2449
Eam1104I CTCTTC 3 cut(s) 147, 1464, 1558
Eam1105I GACNNNNNGTC 1 cut(s) 1623
EarI CTCTTC 3 cut(s) 147, 1464, 1558
EciI GGCGGA 1 cut(s) 2736
Ecl136II GAGCTC 2 cut(s) 427, 1387
Eco130I CCWWGG 4 cut(s) 1685, 1691, 2014, 3136
Eco147I AGGCCT 1 cut(s) 162
Eco24I GRGCYC 3 cut(s) 429, 1389, 1871
Eco31I GGTCTC 2 cut(s) 1675, 3131
Eco32I GATATC 1 cut(s) 2877
Eco53kI GAGCTC 2 cut(s) 427, 1387
Eco57I CTGAAG 1 cut(s) 2963
Eco88I CYCGRG 2 cut(s) 1388, 2214
Eco91I GGTNACC 1 cut(s) 1247
EcoICRI GAGCTC 2 cut(s) 427, 1387
EcoO109I RGGNCCY 1 cut(s) 2150
EcoO65I GGTNACC 1 cut(s) 1247
EcoRI GAATTC 2 cut(s) 1492, 2958
EcoRII CCWGG 2 cut(s) 60, 3049
EcoRV GATATC 1 cut(s) 2877
EcoT14I CCWWGG 4 cut(s) 1685, 1691, 2014, 3136
EcoT22I ATGCAT 1 cut(s) 36
EcoT38I GRGCYC 3 cut(s) 429, 1389, 1871
ErhI CCWWGG 4 cut(s) 1685, 1691, 2014, 3136
FauNDI CATATG 1 cut(s) 880
FbaI TGATCA 1 cut(s) 384
Fnu4HI GCNGC 6 cut(s) 214, 1528, 1603, 2535, 2585, 3193
FokI GGATG 3 cut(s) 182, 2248, 3196
FriOI GRGCYC 3 cut(s) 429, 1389, 1871
Fsp4HI GCNGC 6 cut(s) 214, 1528, 1603, 2535, 2585, 3193
FspBI CTAG 4 cut(s) 266, 2174, 2531, 2751
GlaI GCGC 2 cut(s) 2129, 2131
GluI GCNGC 6 cut(s) 214, 1528, 1603, 2535, 2585, 3193
GsaI CCCAGC 2 cut(s) 1874, 3164
GsuI CTGGAG 2 cut(s) 131, 2646
HaeIII GGCC 6 cut(s) 65, 162, 1351, 1690, 1869, 2451
HapII CCGG 2 cut(s) 1723, 2872
HhaI GCGC 2 cut(s) 2130, 2132
Hin6I GCGC 2 cut(s) 2128, 2130
HinP1I GCGC 2 cut(s) 2128, 2130
HincII GTYRAC 3 cut(s) 1617, 2191, 2404
HindII GTYRAC 3 cut(s) 1617, 2191, 2404
HindIII AAGCTT 3 cut(s) 207, 2578, 2813
HpaII CCGG 2 cut(s) 1723, 2872
HphI GGTGA 3 cut(s) 320, 1850, 2482
HpyCH4III ACNGT 7 cut(s) 1247, 2141, 2259, 2319, 2487, 2647, 3064
HpyF10VI GCNNNNNNNGC 2 cut(s) 1866, 2307
HspAI GCGC 2 cut(s) 2128, 2130
Ksp22I TGATCA 1 cut(s) 384
LguI GCTCTTC 1 cut(s) 147
LmnI GCTCC 1 cut(s) 2218
Lsp1109I GCAGC 4 cut(s) 200, 1539, 1614, 2521
LweI GCATC 4 cut(s) 430, 577, 724, 2226
MaeI CTAG 4 cut(s) 266, 2174, 2531, 2751
MaeIII GTNAC 5 cut(s) 1247, 1403, 2831, 2934, 3169
MauBI CGCGCGCG 1 cut(s) 2128
MfeI CAATTG 8 cut(s) 416, 563, 710, 857, 1004, 1151, 1621, 2322
MflI RGATCY 3 cut(s) 268, 1966, 1993
MhlI GDGCHC 4 cut(s) 429, 1389, 1871, 2173
MlsI TGGCCA 3 cut(s) 65, 1351, 2451
MluNI TGGCCA 3 cut(s) 65, 1351, 2451
MlyI GAGTC 8 cut(s) 167, 421, 568, 715, 862, 1009, 1619, 1636
MmeI TCCRAC 3 cut(s) 76, 2213, 2826
Mox20I TGGCCA 3 cut(s) 65, 1351, 2451
Mph1103I ATGCAT 1 cut(s) 36
MscI TGGCCA 3 cut(s) 65, 1351, 2451
MseI TTAA 8 cut(s) 1443, 1506, 1649, 2048, 2499, 2541, 2909, 2988
MslI CAYNNNNRTG 1 cut(s) 2840
Msp20I TGGCCA 3 cut(s) 65, 1351, 2451
MspI CCGG 2 cut(s) 1723, 2872
MspR9I CCNGG 2 cut(s) 62, 3051
MunI CAATTG 8 cut(s) 416, 563, 710, 857, 1004, 1151, 1621, 2322
Mva1269I GAATGC 1 cut(s) 34
MvaI CCWGG 2 cut(s) 62, 3051
MvnI CGCG 4 cut(s) 2086, 2128, 2130, 2132
MwoI GCNNNNNNNGC 2 cut(s) 1866, 2307
NcoI CCATGG 1 cut(s) 2014
NdeI CATATG 1 cut(s) 880
NlaIV GGNNCC 3 cut(s) 1702, 1869, 2971
NmeAIII GCCGAG 1 cut(s) 2388
NmuCI GTSAC 2 cut(s) 2934, 3169
NsiI ATGCAT 1 cut(s) 36
NspI RCATGY 3 cut(s) 140, 237, 1318
PaeI GCATGC 2 cut(s) 140, 237
PaeR7I CTCGAG 1 cut(s) 1388
PagI TCATGA 1 cut(s) 2617
PauI GCGCGC 1 cut(s) 2128
PceI AGGCCT 1 cut(s) 162
PciI ACATGT 1 cut(s) 1314
PciSI GCTCTTC 1 cut(s) 147
PcsI WCGNNNNNNNCGW 1 cut(s) 1395
PctI GAATGC 1 cut(s) 34
PflMI CCANNNNNTGG 1 cut(s) 300
PfoI TCCNGGA 1 cut(s) 3049
PkrI GCNGC 6 cut(s) 215, 1529, 1604, 2536, 2586, 3194
PleI GAGTC 8 cut(s) 167, 420, 567, 714, 861, 1008, 1618, 1636
PpsI GAGTC 8 cut(s) 167, 420, 567, 714, 861, 1008, 1618, 1636
PpuMI RGGWCCY 1 cut(s) 2150
PscI ACATGT 1 cut(s) 1314
PshAI GACNNNNGTC 1 cut(s) 2155
PshBI ATTAAT 2 cut(s) 1443, 2541
PsiI TTATAA 2 cut(s) 366, 1482
Psp124BI GAGCTC 2 cut(s) 429, 1389
Psp5II RGGWCCY 1 cut(s) 2150
Psp6I CCWGG 2 cut(s) 60, 3049
PspEI GGTNACC 1 cut(s) 1247
PspFI CCCAGC 2 cut(s) 1870, 3160
PspGI CCWGG 2 cut(s) 60, 3049
PspN4I GGNNCC 3 cut(s) 1702, 1869, 2971
PspOMI GGGCCC 1 cut(s) 1867
PspPPI RGGWCCY 1 cut(s) 2150
PspXI VCTCGAGB 1 cut(s) 1388
PsuI RGATCY 3 cut(s) 268, 1966, 1993
PteI GCGCGC 1 cut(s) 2128
RseI CAYNNNNRTG 1 cut(s) 2840
SacI GAGCTC 2 cut(s) 429, 1389
SapI GCTCTTC 1 cut(s) 147
SaqAI TTAA 8 cut(s) 1443, 1506, 1649, 2048, 2499, 2541, 2909, 2988
SatI GCNGC 6 cut(s) 214, 1528, 1603, 2535, 2585, 3193
SchI GAGTC 8 cut(s) 167, 421, 568, 715, 862, 1009, 1619, 1636
ScrFI CCNGG 2 cut(s) 62, 3051
SduI GDGCHC 4 cut(s) 429, 1389, 1871, 2173
SfaNI GCATC 4 cut(s) 430, 577, 724, 2226
SfcI CTRYAG 1 cut(s) 2315
Sfr274I CTCGAG 1 cut(s) 1388
SlaI CTCGAG 1 cut(s) 1388
SmiMI CAYNNNNRTG 1 cut(s) 2840
SmlI CTYRAG 4 cut(s) 1274, 1300, 1388, 1678
SmoI CTYRAG 4 cut(s) 1274, 1300, 1388, 1678
SphI GCATGC 2 cut(s) 140, 237
SseBI AGGCCT 1 cut(s) 162
SsiI CCGC 5 cut(s) 2585, 2607, 2747, 3032, 3192
SspI AATATT 2 cut(s) 1503, 2569
SspMI CTAG 4 cut(s) 266, 2174, 2531, 2751
SstI GAGCTC 2 cut(s) 429, 1389
StuI AGGCCT 1 cut(s) 162
StyD4I CCNGG 2 cut(s) 60, 3049
StyI CCWWGG 4 cut(s) 1685, 1691, 2014, 3136
TaaI ACNGT 7 cut(s) 1247, 2141, 2259, 2319, 2487, 2647, 3064
TaqI TCGA 1 cut(s) 1389
TauI GCSGC 2 cut(s) 2587, 3195
Tru1I TTAA 8 cut(s) 1443, 1506, 1649, 2048, 2499, 2541, 2909, 2988
Tru9I TTAA 8 cut(s) 1443, 1506, 1649, 2048, 2499, 2541, 2909, 2988
TscAI CASTG 8 cut(s) 457, 604, 751, 898, 1045, 1192, 3162, 3178
TseFI GTSAC 2 cut(s) 2934, 3169
TseI GCWGC 4 cut(s) 213, 1527, 1602, 2534
Tsp45I GTSAC 2 cut(s) 2934, 3169
TspDTI ATGAA 8 cut(s) 388, 535, 682, 829, 976, 1123, 2018, 2852
TspRI CASTG 8 cut(s) 457, 604, 751, 898, 1045, 1192, 3162, 3178
Van91I CCANNNNNTGG 1 cut(s) 300
VspI ATTAAT 2 cut(s) 1443, 2541
XbaI TCTAGA 1 cut(s) 265
XceI RCATGY 3 cut(s) 140, 237, 1318
XcmI CCANNNNNNNNNTGG 1 cut(s) 2545
XhoI CTCGAG 1 cut(s) 1388
XspI CTAG 4 cut(s) 266, 2174, 2531, 2751
Zsp2I ATGCAT 1 cut(s) 36
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.